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Yan W, Gao H, Qian X, Jiang Y, Zhou J, Dong W, Xin F, Zhang W, Jiang M. Biotechnological applications of the non-conventional yeast Meyerozyma guilliermondii. Biotechnol Adv 2020; 46:107674. [PMID: 33276074 DOI: 10.1016/j.biotechadv.2020.107674] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Revised: 10/31/2020] [Accepted: 11/25/2020] [Indexed: 12/11/2022]
Abstract
Unconventional yeasts have attracted increased attentions owning to their unique biochemical properties and potential application in the biotechnological process. With the rapid development of microbial isolation tools and synthetic biology, more promising industrial yeasts have been isolated and characterized. Meyerozyma guilliermondii (anamorph Candida guilliermondii) is an ascomycetous yeast with several unique characteristics and physiology, such as the wide substrates spectrum and capability of various chemicals synthesis. The potential physiological and metabolic capabilities of M. guilliermondii, which can utilize various carbon sources including typical hydrophilic and hydrophobic materials were first reviewed in this review. Moreover, the wide applications of M. guilliermondii, such as for industrial enzymes production, metabolites synthesis and biocontrol were also reviewed. With the development of system and synthetic biology, M. guilliermondii will provide new opportunities for potential applications in biotechnology sectors in the future.
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Affiliation(s)
- Wei Yan
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China
| | - Hao Gao
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China; Jiangsu National Synergetic Innovation Center for Advanced Materials (SICAM), Nanjing Tech University, Nanjing, PR China
| | - Xiujuan Qian
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China
| | - Yujia Jiang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China
| | - Jie Zhou
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China; Jiangsu National Synergetic Innovation Center for Advanced Materials (SICAM), Nanjing Tech University, Nanjing, PR China
| | - Weiliang Dong
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China; Jiangsu National Synergetic Innovation Center for Advanced Materials (SICAM), Nanjing Tech University, Nanjing, PR China
| | - Fengxue Xin
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China; Jiangsu National Synergetic Innovation Center for Advanced Materials (SICAM), Nanjing Tech University, Nanjing, PR China.
| | - Wenming Zhang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China; Jiangsu National Synergetic Innovation Center for Advanced Materials (SICAM), Nanjing Tech University, Nanjing, PR China
| | - Min Jiang
- State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, PR China; Jiangsu National Synergetic Innovation Center for Advanced Materials (SICAM), Nanjing Tech University, Nanjing, PR China.
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Atzmüller D, Ullmann N, Zwirzitz A. Identification of genes involved in xylose metabolism of Meyerozyma guilliermondii and their genetic engineering for increased xylitol production. AMB Express 2020; 10:78. [PMID: 32314068 PMCID: PMC7171046 DOI: 10.1186/s13568-020-01012-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Accepted: 04/09/2020] [Indexed: 11/16/2022] Open
Abstract
Meyerozyma guilliermondii, a non-conventional yeast that naturally assimilates xylose, is considered as a candidate for biotechnological production of the sugar alternative xylitol. Because the genes of the xylose metabolism were yet unknown, all efforts published so far to increase the xylitol yield of this yeast are limited to fermentation optimization. Hence, this study aimed to genetically engineer this organism for the first time with the objective to increase xylitol production. Therefore, the previously uncharacterized genes of M. guilliermondii ATCC 6260 encoding for xylose reductase (XR) and xylitol dehydrogenase (XDH) were identified by pathway investigations and sequence similarity analysis. Cloning and overexpression of the putative XR as well as knockout of the putative XDH genes generated strains with about threefold increased xylitol yield. Strains that combined both genetic modifications displayed fivefold increase in overall xylitol yield. Enzymatic activity assays with lysates of XR overexpressing and XDH knockout strains underlined the presumed functions of the respective genes. Furthermore, growth evaluation of the engineered strains on xylose as sole carbon source provides insights into xylose metabolism and its utilization for cell growth.![]()
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Ruas FAD, Guerra-Sá R. In silico Prediction of Protein-Protein Interaction Network Induced by Manganese II in Meyerozyma guilliermondii. Front Microbiol 2020; 11:236. [PMID: 32140149 PMCID: PMC7042463 DOI: 10.3389/fmicb.2020.00236] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2019] [Accepted: 01/31/2020] [Indexed: 12/12/2022] Open
Abstract
Recently, there has been an increasing interest in the use of yeast to produce biosorbent materials, because yeast is economical to use, adaptable to a variety of conditions, and amenable to morphological manipulations to yield better raw biomaterials. Previous studies from our laboratory have shown that Meyerozyma guilliermondii, a non-pathogenic haploid yeast (ascomycete), exhibits excellent biosorption capacity for Mn2+, as demonstrated by kinetic analyses. Shotgun/bottom-up analyses of soluble fractions revealed a total of 1257 identified molecules, with 117 proteins expressed in the absence of Mn2+ and 69 expressed only in the presence of Mn2+. In this article, we describe the first in silico prediction and screening of protein–protein interactions (PPIs) in M. guilliermondii using experimental data from shotgun/bottom-up analyses. We also present the categorization of biological processes (BPs), molecular functions (MFs), and metabolic pathways of 71 proteins upregulated in the M. guilliermondii proteome in response to stress caused by an excess of Mn2+ ions. Most of the annotated proteins were related to oxidation–reduction processes, metabolism, and response to oxidative stress. We identified seven functional enrichments and 42 metabolic pathways; most proteins belonged to pathways related to metabolic pathways (19 proteins) followed by the biosynthesis of secondary metabolites (10 proteins) in the presence of Mn2+. Using our data, it is possible to infer that defense mechanisms minimize the impact of Mn2+ via the expression of antioxidant proteins, thus allowing adjustment during the defense response. Previous studies have not considered protein interactions in this genus in a manner that permits comparisons. Consequently, the findings of the current study are innovative, highly relevant, and provide a description of interactive complexes and networks that yield insight into the cellular processes of M. guilliermondii. Collectively, our data will allow researchers to explore the biotechnological potential of M. guilliermondii in future bioremediation processes.
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Affiliation(s)
- France Anne Dias Ruas
- Laboratório de Bioquímica e Biologia Molecular, Departamento de Ciências Biológicas, Instituto de Ciências Exatas e Biológica (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, Brazil
| | - Renata Guerra-Sá
- Laboratório de Bioquímica e Biologia Molecular, Departamento de Ciências Biológicas, Instituto de Ciências Exatas e Biológica (NUPEB), Universidade Federal de Ouro Preto, Ouro Preto, Brazil
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Defosse TA, Le Govic Y, Courdavault V, Clastre M, Vandeputte P, Chabasse D, Bouchara JP, Giglioli-Guivarc'h N, Papon N. [Yeasts from the CTG clade (Candida clade): Biology, impact in human health, and biotechnological applications]. J Mycol Med 2018; 28:257-268. [PMID: 29545121 DOI: 10.1016/j.mycmed.2018.02.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Revised: 02/05/2018] [Accepted: 02/12/2018] [Indexed: 11/29/2022]
Abstract
Among the subdivision of Saccharomycotina (ascomycetes budding yeasts), the CTG clade (formerly the Candida clade) includes species that display a particular genetic code. In these yeasts, the CTG codon is predominantly translated as a serine instead of a leucine residue. It is now well-known that some CTG clade species have a major impact on human and its activities. Some of them are recognized as opportunistic agents of fungal infections termed candidiasis. In addition, another series of species belonging to the CTG clade draws the attention of some research groups because they exhibit a strong potential in various areas of biotechnology such as biological control, bioremediation, but also in the production of valuable biocompounds (biofuel, vitamins, sweeteners, industrial enzymes). Here we provide an overview of recent advances concerning the biology, clinical relevance, and currently tested biotechnological applications of species of the CTG clade. Future directions for scientific research on these particular yeasts are also discussed.
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Affiliation(s)
- T A Defosse
- Groupe d'étude des interactions Hôte-Pathogène (EA 3142), SFR interactions cellulaires et applications thérapeutiques, université d'Angers, 49933 Angers, France; EA 2106, université de Tours, biomolécules et biotechnologies végétales, Tours, France
| | - Y Le Govic
- Groupe d'étude des interactions Hôte-Pathogène (EA 3142), SFR interactions cellulaires et applications thérapeutiques, université d'Angers, 49933 Angers, France; Laboratoire de parasitologie - mycologie, centre hospitalier universitaire d'Angers, Angers, France
| | - V Courdavault
- EA 2106, université de Tours, biomolécules et biotechnologies végétales, Tours, France
| | - M Clastre
- EA 2106, université de Tours, biomolécules et biotechnologies végétales, Tours, France
| | - P Vandeputte
- Groupe d'étude des interactions Hôte-Pathogène (EA 3142), SFR interactions cellulaires et applications thérapeutiques, université d'Angers, 49933 Angers, France; Laboratoire de parasitologie - mycologie, centre hospitalier universitaire d'Angers, Angers, France
| | - D Chabasse
- Groupe d'étude des interactions Hôte-Pathogène (EA 3142), SFR interactions cellulaires et applications thérapeutiques, université d'Angers, 49933 Angers, France; Laboratoire de parasitologie - mycologie, centre hospitalier universitaire d'Angers, Angers, France
| | - J-P Bouchara
- Groupe d'étude des interactions Hôte-Pathogène (EA 3142), SFR interactions cellulaires et applications thérapeutiques, université d'Angers, 49933 Angers, France; Laboratoire de parasitologie - mycologie, centre hospitalier universitaire d'Angers, Angers, France
| | - N Giglioli-Guivarc'h
- EA 2106, université de Tours, biomolécules et biotechnologies végétales, Tours, France
| | - N Papon
- Groupe d'étude des interactions Hôte-Pathogène (EA 3142), SFR interactions cellulaires et applications thérapeutiques, université d'Angers, 49933 Angers, France.
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Defosse TA, Le Govic Y, Vandeputte P, Courdavault V, Clastre M, Bouchara JP, Chowdhary A, Giglioli-Guivarc'h N, Papon N. A synthetic construct for genetic engineering of the emerging pathogenic yeast Candida auris. Plasmid 2018; 95:7-10. [PMID: 29170093 DOI: 10.1016/j.plasmid.2017.11.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Revised: 11/16/2017] [Accepted: 11/19/2017] [Indexed: 10/18/2022]
Abstract
Candida auris has recently emerged as a global cause of severe hospital-acquired fungal infections. To enable functional genomic approaches for this prominent pathogen, we designed a synthetic construct that can be used to genetically transform the genome-sequenced strain VPCI 479/P/13 of C. auris following an efficient electroporation procedure.
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Affiliation(s)
- Tatiana A Defosse
- Groupe d'Etude des Interactions Hôte-Pathogène (EA 3142), GEIHP, UNIV. Angers, Université Bretagne-Loire, Angers, France; Université François-Rabelais de Tours, Biomolécules et Biotechnologies Végétales, Tours EA 2106, France
| | - Yohann Le Govic
- Groupe d'Etude des Interactions Hôte-Pathogène (EA 3142), GEIHP, UNIV. Angers, Université Bretagne-Loire, Angers, France; Laboratoire de Parasitologie - Mycologie, Centre Hospitalier Universitaire d'Angers, Angers, France
| | - Patrick Vandeputte
- Groupe d'Etude des Interactions Hôte-Pathogène (EA 3142), GEIHP, UNIV. Angers, Université Bretagne-Loire, Angers, France; Laboratoire de Parasitologie - Mycologie, Centre Hospitalier Universitaire d'Angers, Angers, France
| | - Vincent Courdavault
- Université François-Rabelais de Tours, Biomolécules et Biotechnologies Végétales, Tours EA 2106, France
| | - Marc Clastre
- Université François-Rabelais de Tours, Biomolécules et Biotechnologies Végétales, Tours EA 2106, France
| | - Jean-Philippe Bouchara
- Groupe d'Etude des Interactions Hôte-Pathogène (EA 3142), GEIHP, UNIV. Angers, Université Bretagne-Loire, Angers, France; Laboratoire de Parasitologie - Mycologie, Centre Hospitalier Universitaire d'Angers, Angers, France
| | - Anuradha Chowdhary
- Department of Medical Mycology, Vallabhbhai Patel Chest Institute, University of Delhi, Delhi, India
| | | | - Nicolas Papon
- Groupe d'Etude des Interactions Hôte-Pathogène (EA 3142), GEIHP, UNIV. Angers, Université Bretagne-Loire, Angers, France.
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Navarro-Arias MJ, Defosse TA, Dementhon K, Csonka K, Mellado-Mojica E, Dias Valério A, González-Hernández RJ, Courdavault V, Clastre M, Hernández NV, Pérez-García LA, Singh DK, Vizler C, Gácser A, Almeida RS, Noël T, López MG, Papon N, Mora-Montes HM. Disruption of Protein Mannosylation Affects Candida guilliermondii Cell Wall, Immune Sensing, and Virulence. Front Microbiol 2016; 7:1951. [PMID: 27994582 PMCID: PMC5133257 DOI: 10.3389/fmicb.2016.01951] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2016] [Accepted: 11/21/2016] [Indexed: 11/13/2022] Open
Abstract
The fungal cell wall contains glycoproteins that interact with the host immune system. In the prominent pathogenic yeast Candida albicans, Pmr1 acts as a Golgi-resident ion pump that provides cofactors to mannosyltransferases, regulating the synthesis of mannans attached to glycoproteins. To gain insight into a putative conservation of such a crucial process within opportunistic yeasts, we were particularly interested in studying the role of the PMR1 homolog in a low-virulent species that rarely causes candidiasis, Candida guilliermondii. We disrupted C. guilliermondii PMR1 and found that loss of Pmr1 affected cell growth and morphology, biofilm formation, susceptibility to cell wall perturbing agents, mannan levels, and the wall composition and organization. Despite the significant increment in the amount of β1,3-glucan exposed at the wall surface, this positively influenced only the ability of the mutant to stimulate IL-10 production by human monocytes, suggesting that recognition of both mannan and β1,3-glucan, is required to stimulate strong levels of pro-inflammatory cytokines. Accordingly, our results indicate C. guilliermondii sensing by monocytes was critically dependent on the recognition of N-linked mannans and β1,3-glucan, as reported in other Candida species. In addition, chemical remotion of cell wall O-linked mannans was found to positively influence the recognition of C. guilliermondii by human monocytes, suggesting that O-linked mannans mask other cell wall components from immune cells. This observation contrasts with that reported in C. albicans. Finally, mice infected with C. guilliermondii pmr1Δ null mutant cells had significantly lower fungal burdens compared to animals challenged with the parental strain. Accordingly, the null mutant showed inability to kill larvae in the Galleria mellonella infection model. This study thus demonstrates that mannans are relevant for the C. guilliermondii-host interaction, with an atypical role for O-linked mannans.
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Affiliation(s)
- María J Navarro-Arias
- División de Ciencias Naturales y Exactas, Departamento de Biología, Universidad de Guanajuato Guanajuato, Mexico
| | - Tatiana A Defosse
- Biomolécules et Biotechnologies Végétales, Université François-Rabelais de ToursTours, France; Groupe d'Etude des Interactions Hôte-Pathogène, Université d'AngersAngers, France
| | - Karine Dementhon
- Laboratoire de Microbiologie Fondamentale et Pathogénicité, Université Bordeaux 2, UMR-Centre National de la Recherche Scientifique 5234 Bordeaux, France
| | - Katalin Csonka
- Department of Microbiology, University of Szeged Szeged, Hungary
| | - Erika Mellado-Mojica
- Centro de Investigaciones y de Estudios Avanzados del Instituto Politécnico Nacional (IPN) Guanajuato, Mexico
| | - Aline Dias Valério
- Departamento de Microbiologia, Centro de Ciências Biológicas, Universidade Estadual de Londrina Londrina, Brazil
| | - Roberto J González-Hernández
- División de Ciencias Naturales y Exactas, Departamento de Biología, Universidad de Guanajuato Guanajuato, Mexico
| | - Vincent Courdavault
- Biomolécules et Biotechnologies Végétales, Université François-Rabelais de Tours Tours, France
| | - Marc Clastre
- Biomolécules et Biotechnologies Végétales, Université François-Rabelais de Tours Tours, France
| | - Nahúm V Hernández
- División de Ciencias Naturales y Exactas, Departamento de Biología, Universidad de Guanajuato Guanajuato, Mexico
| | - Luis A Pérez-García
- División de Ciencias Naturales y Exactas, Departamento de Biología, Universidad de Guanajuato Guanajuato, Mexico
| | | | - Csaba Vizler
- Institute of Biochemistry, Biological Research Center of the Hungarian Academy of Sciences Szeged, Hungary
| | - Attila Gácser
- Department of Microbiology, University of Szeged Szeged, Hungary
| | - Ricardo S Almeida
- Departamento de Microbiologia, Centro de Ciências Biológicas, Universidade Estadual de Londrina Londrina, Brazil
| | - Thierry Noël
- Laboratoire de Microbiologie Fondamentale et Pathogénicité, Université Bordeaux 2, UMR-Centre National de la Recherche Scientifique 5234 Bordeaux, France
| | - Mercedes G López
- Centro de Investigaciones y de Estudios Avanzados del Instituto Politécnico Nacional (IPN) Guanajuato, Mexico
| | - Nicolas Papon
- Groupe d'Etude des Interactions Hôte-Pathogène, Université d'Angers Angers, France
| | - Héctor M Mora-Montes
- División de Ciencias Naturales y Exactas, Departamento de Biología, Universidad de Guanajuato Guanajuato, Mexico
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Candida guilliermondii as a potential biocatalyst for the production of long-chain α,ω-dicarboxylic acids. Biotechnol Lett 2016; 39:429-438. [DOI: 10.1007/s10529-016-2264-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2016] [Accepted: 11/17/2016] [Indexed: 12/18/2022]
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Defosse TA, Mélin C, Clastre M, Besseau S, Lanoue A, Glévarec G, Oudin A, Dugé de Bernonville T, Vandeputte P, Linder T, Bouchara JP, Courdavault V, Giglioli-Guivarc'h N, Papon N. An additionalMeyerozyma guilliermondii IMH3gene confers mycophenolic acid resistance in fungal CTG clade species. FEMS Yeast Res 2016; 16:fow078. [DOI: 10.1093/femsyr/fow078] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/06/2016] [Indexed: 01/11/2023] Open
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