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Liu Y, Wang X, Liu X, Nan F, Wang J, Liu Q, Lv J, Feng J, Xie S. Light-driven differences in bacterial networks and organic matter decomposition: Insights from an analysis of the harmful cyanobacterium Microcystis aeruginosa PCC 7806. HARMFUL ALGAE 2024; 139:102740. [PMID: 39567075 DOI: 10.1016/j.hal.2024.102740] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2024] [Revised: 10/18/2024] [Accepted: 10/20/2024] [Indexed: 11/22/2024]
Abstract
Freshwater systems are critical yet often underestimated components of global carbon cycling, functioning both as carbon sinks and sources. Cyanobacteria play a key role in this cycle by capturing atmospheric carbon dioxide through photosynthesis. The captured carbon is either released back into the atmosphere or sequestered in sediments following organismal decay. This study examines the pivotal role of cyanobacteria, specifically Microcystis aeruginosa PCC 7806, in the biogeochemical cycling of carbon in freshwater ecosystems, with a focus on how light influences the degradation of cyanobacteria-derived organic matter. Using a combination of 16S rDNA sequencing and excitation-emission matrix coupled with parallel factor (EEM-PARAFAC) analysis, we conducted a 50-day experiment to investigate the dynamics of dissolved organic matter (DOM) and lysate organic matter (LOM) derived from M. aeruginosa PCC 7806 under light and dark conditions. Our results demonstrate that light significantly impacts bacterial community composition, gene functionality, and the decomposition of organic matter. The findings emphasize the crucial role of light in facilitating microbial adaptation, stabilizing microbial networks and driving organic substrate transformation. These insights underscore the influence of light on microbial community dynamics and organic matter degradation, revealing shifts in microbial populations under varying light conditions. This suggests a strong link between photochemical processes and microbial activity, with significant ecological implications.
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Affiliation(s)
- Yang Liu
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Xiding Wang
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Xudong Liu
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Fangru Nan
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Jie Wang
- College of Biological Science and Technology, Taiyuan Normal University, Jinzhong, 030619, China; Shanxi Key Laboratory of Earth Surface Processes and Resource Ecology Security in Fenhe River Basin, Taiyuan Normal University, Jinzhong, 030619, China
| | - Qi Liu
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Junping Lv
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Jia Feng
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China
| | - Shulian Xie
- Shanxi Key Laboratory for Research and Development of Regional Plants, School of Life Science, Shanxi University, Taiyuan 030006, China.
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Tan L, Wang L, Cai Q. Daily process and key characteristics of phytoplankton bloom during a low-water level period in a large subtropical reservoir bay. FRONTIERS IN PLANT SCIENCE 2024; 15:1390019. [PMID: 38689840 PMCID: PMC11058941 DOI: 10.3389/fpls.2024.1390019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 04/01/2024] [Indexed: 05/02/2024]
Abstract
Reservoirs, heavily influenced by artificial management, often harbor phytoplankton assemblages dominated by cyanobacteria or dinoflagellates, triggering significant changes in aquatic ecosystems. However, due to limited sampling frequency and insufficient attention to species composition, the bloom processes and key characteristics of phytoplankton community structure have not been systematically elucidated. During the low-water level period when blooms are most likely to occur (June to September) in a tributary bay of the Three Gorges Reservoir, daily sampling was conducted to investigate phytoplankton community composition, identify significant environmental factors, and evaluate important structure characteristics of phytoplankton community. The results showed that Microcystis aeruginosa maintained a clear dominance for almost a month in stage 1, with low Shannon and evenness but a high dominance index. Phytoplankton total density and biomass decreased drastically in stage 2, but Microcystis aeruginosa still accounted for some proportion. The highest Shannon and evenness but the lowest dominance index occurred in stage 3. Peridiniopsis niei occurred massively in stage 4, but its dominant advantages lasted only one to two days. NH4-N was responsible for the dominance of Microcystis aeruginosa, while TP and PO4-P was responsible for the dominance of Peridiniopsis niei; however, precipitation contributed to their drastic decrease or disappearance to some extent. The TN : TP ratio could be considered as an important indicator to determine whether Microcystis aeruginosa or Peridiniopsis niei dominated the phytoplankton community. Throughout the study period, physiochemical factors explained more variation in phytoplankton data than meteorological and hydrological factors. Pairwise comparisons revealed an increase in average β diversity with stage progression, with higher β diversities based on abundance data than those based on presence/absence data. Repl had a greater effect on β diversity differences based on presence/absence data, whereas RichDiff had a greater effect on β diversity differences based on species abundance data. Co-occurrence networks for stage 1 showed the most complex structure, followed by stage 4, while the network for stage 3 was relatively sparse, although the overall community division remained compact. This study provides a useful attempt to explore the status and changes in phytoplankton community structure during the bloom process through high-resolution investigation.
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Affiliation(s)
- Lu Tan
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Lan Wang
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei, China
- Hubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China
| | - Qinghua Cai
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei, China
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Dash SP, Manu S, Kim JY, Rastogi G. Spatio-temporal structuring and assembly of abundant and rare bacteria in the benthic compartment of a marginally eutrophic lagoon. MARINE POLLUTION BULLETIN 2024; 200:116138. [PMID: 38359478 DOI: 10.1016/j.marpolbul.2024.116138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2023] [Revised: 02/01/2024] [Accepted: 02/05/2024] [Indexed: 02/17/2024]
Abstract
The investigations on ecological processes that structure abundant and rare sub-communities are limited from the benthic compartments of tropical brackish lagoons. We examined the spatial and temporal patterns in benthic bacterial communities of a brackish lagoon; Chilika. Abundant and rare bacteria showed differences in niche specialization but exhibited similar distance-decay patterns. Abundant bacteria were mostly habitat generalists due to their broader niche breadth, environmental response thresholds, and greater functional redundancy. In contrast, rare bacteria were mostly habitat specialists due to their narrow niche breadth, lower environmental response thresholds, and functional redundancy. The spatial patterns in abundant bacteria were largely shaped by stochastic processes (88.7 %, mostly dispersal limitation). In contrast, rare bacteria were mostly structured by deterministic processes (56.4 %, mostly heterogeneous selection). These findings provided a quantitative assessment of the different forces namely spatial, environmental, and biotic that together structured bacterial communities in the benthic compartment of a marginally eutrophic lagoon.
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Affiliation(s)
- Stiti Prangya Dash
- Wetland Research and Training Centre, Chilika Development Authority, Balugaon 752030, Odisha, India; KIIT School of Biotechnology, Kalinga Institute of Industrial Technology, Bhubaneswar 751024, Odisha, India
| | - Shivakumara Manu
- CSIR-Centre for Cellular and Molecular Biology, Hyderabad 500048, India
| | - Ji Yoon Kim
- Department of Biological Science, Kunsan National University, Gunsan 54150, Republic of Korea
| | - Gurdeep Rastogi
- Wetland Research and Training Centre, Chilika Development Authority, Balugaon 752030, Odisha, India.
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Gao X, Feng W, Zhang J, Zhang H, Huo S. Synthesis of Cu 2+ doped biochar and its inactivation performance of Microcystis aeruginosa: Significance of synergetic effect. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 334:122186. [PMID: 37442327 DOI: 10.1016/j.envpol.2023.122186] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2023] [Revised: 07/05/2023] [Accepted: 07/11/2023] [Indexed: 07/15/2023]
Abstract
The harmful cyanobacteria bloom is frequently occurring in the aquatic environment and poses a tremendous threat to both aquatic organisms and ecological function. In this study, a series of Cu2+ doped biochar (BC) composites (Cu-BCs) with different loading ratios (0.1 %-5 wt %) (Cu-BC-0.1/0.5/1/2.5/5) was successfully fabricated through a one-step adsorption method for in-situ inactivation of Microcystis aeruginosa and simultaneous removal of microcystin-LR (MC-LR). Compared with the single BC/CuSO4 and other Cu-BCs composites, the Cu-BC-2.5 exhibited the best algae inactivation performance with the lowest 72 h medium effective concentration (EC50) value of 0.34 mg/L and highest chlorophyll α degradation efficiency of 8.31 g/g. Notably, the as-prepared Cu-BC-2.5 maintained good inactivation performance in the near-neutral pH (6.5-8.5), and the presence of humic acid and salts such as Na2CO3 and NaCl. The outstanding inhibitory effect of the Cu-BC-2.5 could be explained by the synergetic effect between biochar and Cu2+, which greatly elevated reactive oxygen species (ROS) intensity and in turn led to severe membrane damage and collapse of the antioxidant system. Additionally, the Cu-BC-2.5 could simultaneously remove the released microcystin-LR (MC-LR) throughout the inactivation process and prevent secondary pollution, thus offering a new insight into the alleviation of harmful cyanobacteria in aquatic environment.
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Affiliation(s)
- Xing Gao
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing, 100012, China; State Key Laboratory for Pollution Control and Resource Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai, 200092, China
| | - Weiying Feng
- School of Space and Environment, Beihang University, Beijing, 100191, China
| | - Jingtian Zhang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing, 100012, China
| | - Hanxiao Zhang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing, 100012, China
| | - Shouliang Huo
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing, 100012, China.
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Huan J, Yang B, Li M, Zhang H, Sun W, Shi B. Growth prediction of Microcystis aeruginosa based on a secondary decomposition integration model. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2023; 88:829-850. [PMID: 37651324 PMCID: wst_2023_211 DOI: 10.2166/wst.2023.211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
Abstract
Microcystis aeruginosa is the dominant species in the blooms of eutrophic lakes such as Taihu Lake in China. Chlorophyll-a is one of the most common indicators to characterize its biomass. The nonlinearity and unsteadiness of the chlorophyll-a sequence decrease the prediction accuracy. In this paper, a secondary decomposition prediction method based on the integration of wavelet decomposition, variational modal decomposition, and gated recurrent unit (WD-VMD-GRU) is proposed. First, the original sequence is decomposed once using wavelet decomposition (WD). Then, the components with higher sample entropy values are decomposed using variational modal decomposition (VMD). Finally, each component is predicted using a gated recurrent unit (GRU), and the final prediction results are obtained by reconstructing each component result. The decomposition effect is ranked as VMD > WD > CEEMDAN > EMD. The WD-VMD-GRU model has a significant advantage compared to the basic model, with an increase of over 6.5% in R2. The secondary decomposition reduces the difficulty of predicting GRU components and has better prediction performance. The RMSE, MAE, and R2 were 1.752, 1.450, 0.969 at 2-day prediction, and 3.169, 2.711, 0.908 at 6-day prediction. Therefore, the WD-VMD-GRU model is superior in accuracy to other methods and can provide a scientific basis for the growth prediction research of M. aeruginosa.
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Affiliation(s)
- Juan Huan
- School of Computer Science and Artificial Intelligence, Aliyun School of Big Data, School of Software, Changzhou University, Changzhou 213164, Jiangsu, China E-mail:
| | - Beier Yang
- School of Computer Science and Artificial Intelligence, Aliyun School of Big Data, School of Software, Changzhou University, Changzhou 213164, Jiangsu, China
| | - Mingbao Li
- School of Computer Science and Artificial Intelligence, Aliyun School of Big Data, School of Software, Changzhou University, Changzhou 213164, Jiangsu, China
| | - Hao Zhang
- School of Computer Science and Artificial Intelligence, Aliyun School of Big Data, School of Software, Changzhou University, Changzhou 213164, Jiangsu, China
| | - Wendi Sun
- School of Computer Science and Artificial Intelligence, Aliyun School of Big Data, School of Software, Changzhou University, Changzhou 213164, Jiangsu, China
| | - Bing Shi
- School of Computer Science and Artificial Intelligence, Aliyun School of Big Data, School of Software, Changzhou University, Changzhou 213164, Jiangsu, China
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