Coupled biodegradation of p-nitrophenol and p-aminophenol in bioelectrochemical system: Mechanism and microbial functional diversity

Biodegradation mechanisms of p-nitrophenol and microflora dynamics in fluidized bed bioreactors

p-Nitrophenol (PNP), a member of the nitroaromatic family, is widely used in the production of pesticides, dyes, pharmaceuticals, and petroleum products. As a toxic compound, PNP is highly resistance to degradation, posing a significant challenge in agricultural and industrial wastewater treatment. Conventional PNP wastewater treatment methods require complex operational conditions that incur high chemical and equipment costs, and potential secondary pollution. Therefore, this study developed an anoxic fluidized bed bioreactor (AFBBR) and an anaerobic-aerobic fluidized bed bioreactor (AAFBBR) to evaluate the biodegradation performance and underlying mechanisms of PNP over a period of 90 days. The effect of glucose to PNP co-substrate ratios and C/N ratios have been systemically investigated. At an influent PNP concentration of 100 mg/L, a glucose to PNP co-substrate ratio of 6:1, and a C/N ratio of 10:1, the degradation of PNP reached 88.8 ± 1.0% in the AFBBR at an HRT of 8.5 h and 95.3 ± 0.3% in the AAFBBR at an HRT of 12.7 h. Meanwhile, the mechanism of PNP biodegradation and microbial community were also studied. Results of the LC-MS/MS revealed the intermediate products and confirmed that PNP biodegradation in both reactors followed the hydroquinone as well as the hydroxyquinol pathways, with the hydroquinone pathway being dominant. Results of the 16S rRNA high throughput sequencing further revealed a predominant presence of Proteobacteria (34% in the AFBBR, 42 and 65% in the anaerobic as well as aerobic zones of the AAFBBR, respectively), Firmicutes (35, 40, and 4%), Saccharibacteria (14, 9, and 4%) and Bacteroidetes (5, 4, and 19%). In the AFBBR and the AAFBBR, the key bacterial genera responsible for PNP degradation include Lactococcus, Escherichia-Shigella, Saccharibacteria_norank, Acinetobacter, Comamonas, Zoogloea, and Pseudomonas. Notably, the hydroxyquinol pathway was observed only in the AFBBR and the aerobic zone of the AAFBBR, where Pseudomonas were identified as key PNP degrading bacteria. These phenomena can be attributed to the varying dissolved oxygen concentrations across different zones in the two reactors, offering valuable insights into optimizing PNP removal in pilot-scale bioreactors. This study highlights an efficient, sustainable and cost-effective approach for PNP removal from agricultural and industrial wastewater.

Controlling Lampenflora in Heritage Sites: In Situ Testing of Polyoxometalate-Ionic Liquids in the Pommery Champagne Cellar

Artificial lighting, essential for geotouristic purposes in subterranean sites, has facilitated the growth of colored photosynthetic organisms (lampenflora) on monumental 19th century bas-reliefs of the Pommery Champagne cellar-a UNESCO-protected heritage site-causing significant aesthetic and physical deterioration. To sustainably preserve these stone artworks, biocidal polyoxometalate-ionic liquids (POM-ILs) are tested alongside the commercial biocide Preventol RI80 on three trial zones: cleaned and colonized areas of a wall and clean stone samples positioned on a testing station within the cellar. After 1 year, untreated control areas exhibit growth/regrowth of biofilms, whereas surfaces treated with POM-ILs or Preventol RI80 remain biofilm free. Measurements of colorimetry and chlorophyll fluorescence confirm the effectiveness of both biocides in controlling photosynthetic micro-organisms. However, confocal fluorescence microscopy highlights a reduced long-term inhibition by Preventol RI80 compared to POM-ILs, despite the latter being applied at lower concentrations. Metagenomic analysis further validates the performance of POM-ILs, showing a notable decrease in microbial richness and diversity in treated areas. While both products effectively inhibit phototrophs and fungi, their efficacy against Pseudomonadota is limited, likely due to microbial adaptation via antibiotic resistance genes. This study underscores the potential of POM-ILs as a sustainable alternative for preserving cultural heritage against microbial colonization.

Porous polyurethane biocarriers could enhance system nitrification resilience under high organic loading by retaining key functional bacteria

Resilience to increasing organic loading rates (OLRs) is the key to maintaining stable performance in treating industrial wastewater. First, this study compared the stability, particularly the nitrification performance, of two lab-scale moving bed biofilm reactors (MBBRs) filled with porous polyurethane biocarriers with two conventional activated sludge reactors (ASRs) in the treatment of synthetic coking wastewater under OLRs increasing from 0.3 kg to 1.5 kg COD m-3 day-1. In comparison with the ASRs, which could only achieve complete nitrification (99.31 % ± 0.43 %) at an OLR of 0.7 kg COD m-3 day-1, the MBBRs could achieve efficient NH4+-N removal (99.45 % ± 0.21 %) at an OLR as high as 1.3 kg COD m-3 day-1. Even at an OLR of 1.5 kg COD m-3 day-1 where nitrification was inhibited, the porous polyurethane biocarriers in the MBBRs still maintained a highly diversified bacterial community (Shannon index, 4.34 ± 0.31) by retaining the slow-growing nitrifying bacteria and phenol-degrading bacteria, including Methyloversatilis and Acinetobacter, whose phenol degradation functions were confirmed by metagenome-assembled genome extraction and analysis, while the ASRs lost diversity (Shannon index, 1.41 ± 0.45) due to the sequential occurrence of filamentous and viscous sludge bulking. The advantage of the MBBR was further verified in a full-scale coking wastewater treatment system, where a reactor series filled with 4.35 % porous polyurethane biocarriers exhibited better NH4+-N removal of 99.57 % ± 0.34 % compared to 96.85 % ± 2.56 % for a conventional one under an OLR of 0.54 ± 0.12 kg COD m-3 day-1. The results could contribute to the development of more effective and resilient treatment systems for industrial wastewater.

Removal of ofloxacin and inhibition of antibiotic resistance gene spread during the aerobic biofilm treatment of rural domestic sewage through the micro-nano aeration technology

Micro-nano aeration (MNA) has great potential for emerging contaminant removal. However, the mechanism of antibiotic removal and antibiotic resistance gene (ARG) spread, and the impact of the different aeration conditions remain unclear. This study investigated the adsorption and biodegradation of ofloxacin (OFL) and the spread of ARGs in aerobic biofilm systems under MNA and conventional aeration (CVA) conditions. Results showed that the MNA increased OFL removal by 17.27 %-40.54 % and decreased total ARG abundance by 36.37 %-54.98 %, compared with CVA. MNA-induced biofilm rough morphology, high zeta potential, and reduced extracellular polymeric substance (EPS) secretion enhanced OFL adsorption. High dissolved oxygen and temperature, induced by MNA-enriched aerobic bacteria and their carrying OFL-degrading genes, enhanced OFL biodegradation. MNA inhibited the enrichment of ARG host bacteria, which acquired ARGs possibly via horizontal gene transfer (HGT). Functional profiles involved in the HGT process, including reactive oxygen species production, membrane permeability, mobile genetic elements (MGEs), adenosine triphosphate synthesis, and EPS secretion, were down-regulated by MNA, inhibiting ARG spread. Partial least-squares path modeling revealed that MGEs might be the main factor inhibiting ARG spread. This study provides insights into the mechanisms by which MNA enhances antibiotic removal and inhibits ARG spread in aerobic biofilm systems.

Development of a microbiome for phenolic metabolism based on a domestication approach from lab to industrial application

Despite a lot of efforts devoted to construct efficient microbiomes, there are still major obstacles to moving from the lab to industrial applications due to the inapplicability of existing technologies or limited understanding of microbiome variation regularity. Here we show a domestication strategy to cultivate an effciient and resilient functional microbiome for addressing phenolic wastewater challenges, which involves directional domestication in shaker, laboratory water test in small-scale, gas test in pilot scale, water test in pilot scale, and engineering application in industrial scale. The domestication process includes the transition from water to gas, which provided complex transient environment for screening of a more adaptable and robust microbiome, thereby mitigating the performance disparities encountered when transitioning from laboratory experimentation to industrial engineering applications. Within the domestication and application processes for treating phenolic resin wastewater, a powerful functional microbiome was built by self-assembly. This leads to an augmented biodiversity and the development of more intricate phenol and formaldehyde metabolic pathways. The incorporation of increased stochastic processes and random network characteristics further suggested the stability of the microbial community during the application phase. This study elucidates the self-assembly process of microbial communities during the artificial construction process, showcasing their adaptive evolution under different adverse conditions. It serves as a noteworthy case study for the artificial construction of a microbiome for the engineering application of treating industrial wastewater.

Rosettibacter primus gen. nov., sp. nov., and Rosettibacter firmus sp. nov., facultatively anaerobic moderately thermophilic bacteria of the class Ignavibacteria from hot springs of North Ossetia

A novel facultatively anaerobic moderately thermophilic bacteria, strains 4137-MeT and 4148-MeT, were isolated from hot springs of Karmadon and Ursdon, respectively (North Ossetia, Russian Federation). Gram-negative, motile rods were present singly, in pairs, rosettes, and aggregates, or formed biofilms. Both strains grew optimally at 50-55 °C, pH 7.0 and did not require sodium chloride or yeast extract for growth. They were chemoorganoheterotrophs, growing on mono-, di- and polysaccharides (cellulose, starch, xylan, lichenan, galactan, xyloglucan, mannan, xanthan gum, guar gum) as well as proteinaceous substrates (gelatin, peptone, beef and yeast extract). Growth under anaerobic conditions was observed in presence and absence of external electron acceptors. Sulfur, thiosulfate, arsenate, Fe-citrate, and ferrihydrite were reduced with acetate, starch, or yeast extract as electron donors. The respiratory quinone was MK-7. Major cellular fatty acids of both strains were iso-C15:0, anteiso-C17:0, C15:0, iso-C16:0 and additionally iso-C17:0 for strain 4137-MeT. The size of the genome and genomic DNA G + C content of strain 4137-MeT were 3.24 Mb. and 29.9 %, respectively; for strain 4148-MeT - 3.33 Mb and 30.7 %. According to the 16S rRNA gene sequence and conserved protein sequences phylogenies, strains 4137-MeT and 4148-MeT represented a distinct lineage of the family Melioribacteraceae within the class Ignavibacteria. Based on phylogenetic analysis and phenotypic features, the novel isolates were assigned to a novel genus, for which the name Rosettibacter gen. nov. is proposed. Strain 4148-MeT represents its type species Rosettibacter primus sp. nov., while strain 4137-MeT represents a new species Rosettibacter firmus sp. nov.

Optimizing ciprofloxacin removal through regulations of trophic modes and FNA levels in a moving bed biofilm reactor performing sidestream partial nitritation

The performance of partial nitritation (PN)-moving bed biofilm reactor (MBBR) in removal of antibiotics in the sidestream wastewater has not been investigated so far. In this work, the removal of ciprofloxacin was assessed under varying free nitrous acid (FNA) levels and different trophic modes. For the first time, a positive correlation was observed between ciprofloxacin removal and FNA levels, either in the autotrophic PN-MBBR or in the mixotrophic PN-MBBR, mainly ascribed to the FNA-stimulating effect on heterotrophic bacteria (HB)-induced biodegradation. The maximum ciprofloxacin removal efficiency (∼98 %) and removal rate constant (0.021 L g-1 SS h-1) were obtained in the mixotrophic PN-MBBR at an average FNA level of 0.056 mg-N L-1, which were 5.8 and 51.2 times higher than the corresponding values in the autotrophic PN-MBBR at 0 mg FNA-N L-1. Increasing FNA from 0.006 to 0.056 mg-N L-1 would inhibit ammonia oxidizing bacteria (AOB)-induced cometabolism and metabolism from 10.2 % and 6.9 % to 6.2 % and 6.4 %, respectively, while HB-induced cometabolism and metabolism increased from 31.2 % and 22.7 % to 41.9 % and 34.5 %, respectively. HB-induced cometabolism became the predominant biodegradation pathway (75.9 %-85.8 %) in the mixotrophic mode. Less antimicrobial biotransformation products without the piperazine or fluorine were newly identified to propose potential degradation pathways, corresponding to microbial-induced metabolic types and FNA levels. This work shed light on enhancing antibiotic removal via regulating both FNA accumulation and organic carbon addition in the PN-MBBR process treating sidestream wastewater.

Microbial electricity-driven anaerobic phenol degradation in bioelectrochemical systems

Microbial electrochemical technologies have been extensively employed for phenol removal. Yet, previous research has yielded inconsistent results, leaving uncertainties regarding the feasibility of phenol degradation under strictly anaerobic conditions using anodes as sole terminal electron acceptors. In this study, we employed high-performance liquid chromatography and gas chromatography-mass spectrometry to investigate the anaerobic phenol degradation pathway. Our findings provide robust evidence for the purely anaerobic degradation of phenol, as we identified benzoic acid, 4-hydroxybenzoic acid, glutaric acid, and other metabolites of this pathway. Notably, no typical intermediates of the aerobic phenol degradation pathway were detected. One-chamber reactors (+0.4 V vs. SHE) exhibited a phenol removal rate of 3.5 ± 0.2 mg L-1 d-1, while two-chamber reactors showed 3.6 ± 0.1 and 2.6 ± 0.9 mg L-1 d-1 at anode potentials of +0.4 and + 0.2 V, respectively. Our results also suggest that the reactor configuration certainly influenced the microbial community, presumably leading to different ratios of phenol consumers and microorganisms feeding on degradation products.

Recovery of electron and carbon source from agricultural waste corncob by microbial electrochemical system to enhance wastewater denitrification

The denitrification process in wastewater treatment plants (WWTPs) is limited by insufficient carbon sources. Agricultural waste corncob was investigated for its feasibility as a low-cost carbon source for efficient denitrification. The results showed that the corncob as the carbon source exhibited a similar denitrification rate (19.01 ± 0.03 gNO₃^--N/m³d) to that of the traditional carbon source sodium acetate (19.13 ± 0.37 gNO₃^--N/m³d). When filling corncob into a microbial electrochemical system (MES) three-dimensional anode, the release of corncob carbon sources was well controlled with an improved denitrification rate (20.73 ± 0.20 gNO₃^--N/m³d). Carbon source and electron recovered from corncob led to autotrophic denitrification and heterotrophic denitrification occurred in the MES cathode, which synergistically improved the denitrification performance of the system. The proposed strategy for enhanced nitrogen removal by autotrophic coupled with heterotrophic denitrification using agricultural waste corncob as the sole carbon source opened up an attractive route for low-cost and safe deep nitrogen removal in WWTPs and resource utilization for agricultural waste corncob.

Sequentially modified carbon felt for enhanced p-nitrophenol biodegradation through direct interspecific electron transfer

The widely applied aromatic nitration in modern industry leads to toxic p-nitrophenol (PNP) in environment. Exploring its efficient degradation routes is of great interests. In this study, a novel four-step sequential modification procedure was developed to increase the specific surface area, functional group, hydrophilicity, and conductivity of carbon felt (CF). The implementation of the modified CF promoted reductive PNP biodegradation, attaining 95.2 ± 0.8% of removal efficiency with less accumulation of highly toxic organic intermediates (e.g., p-aminophenol), compared to carrier-free and CF-packed biosystems. The constructed anaerobic-aerobic process with modified CF in 219-d continuous operation achieved further removal of carbon and nitrogen containing intermediates and partial mineralization of PNP. The modified CF promoted the secretion of extracellular polymeric substances (EPS) and cytochrome c (Cyt c), which were essential components to facilitate direct interspecies electron transfer (DIET). Synergistic relationship was deduced that glucose was converted into volatile fatty acids by fermenters (e.g., Longilinea and Syntrophobacter), which donated electrons to the PNP degraders (e.g., Bacteroidetes_vadinHA17) through DIET channels (CF, Cyt c, EPS) to complete PNP removal. This study proposes a novel strategy using engineered conductive material to enhance the DIET process for efficient and sustainable PNP bioremediation.

Horseradish Peroxidase-Coupled Ag3 PO4 /BiVO4 Photoanode for Biophotoelectrocatalytic Degradation of Organic Contaminants

Photoelectrocatalysis (PEC) is regarded as a promising and sustainable process for removal of organic contaminants from wastewater. Meanwhile, enzymatic catalysis also provides an effective way to carry out polluted environment remediation under mild conditions. In this study, a biophotoelectrocatalytic (BPEC) system is designed to remove 4-nitrophenol (4-NP) based on a combination of PEC and enzymatic catalysis. The developed BPEC system is constructed with a Ag₃ PO₄ /BiVO₄ photoanode and a horseradish peroxidase (HRP)-loaded carbon cloth (CC) cathode. On the photoanode, the construction of a direct Z-scheme Ag₃ PO₄ /BiVO₄ heterojunction enhanced the separation efficiency of photogenerated carriers, which promoted the PEC degradation of 4-NP under visible light irradiation. After HRP was immobilized on the cathode, the degradation efficiency of 4-NP reached 97.1 % after 60 min PEC treatment. The result could be ascribed to the HRP-catalyzed oxidation reaction via in situ-generated H₂ O₂ from the CC cathode during the PEC process. Moreover, the possible degradation pathways of 4-NP in such a BPEC system are also discussed.

State-of-art advances on removal, degradation and electrochemical monitoring of 4-aminophenol pollutants in real samples: A review

p_Aminophenol, namely 4-aminophenol (4-AP), is an aromatic compound including hydroxyl and amino groups contiguous together on the benzene ring, which are suitable chemically reactive, amphoteric, and alleviating agents in nature. Amino phenols are appropriate precursors for synthesizing oxazoles and oxazines. However, since the toxicity of aniline and phenol can harm human and herbal organs, it is essential to improve a reliable technique for the determination of even a trace amount of amino phenols, as well as elimination or (bio)degradation/photodegradation of it to protect both the environment and people's health. For this purpose, various analytical methods have been suggested up till now, including spectrophotometry, liquid chromatography, spectrofluorometric and capillary electrophoresis, etc. However, some drawbacks such as the requirement of complex instruments, high costs, not being portable, slow response time, low sensitivity, etc. prevent them to be employed in a wide range and swift in-situ applications. In this regard, besides the efforts such as (bio)degradation/photodegradation or removal of 4-AP pollutants from real samples, electroanalytical techniques have become a promising alternative for monitoring them with high sensitivity. In this review, it was aimed to emphasize and summarize the recent advances, challenges, and opportunities for removal, degradation, and electrochemical sensing 4-AP in real samples. Electroanalytical monitoring of amino phenols was reviewed in detail and explored the various types of electrochemical sensors applied for detecting and monitoring in real samples. Furthermore, the various technique of removal and degradation of 4-AP in industrial and urban wastes were also deliberated. Moreover, deep criticism of multifunctional nanomaterials to be utilized as a catalyst, adsorbent/biosorbent, and electroactive material for the fabrication of electrochemical sensors was covered along with their unique properties. Future perspectives and conclusions were also criticized to pave the way for further studies in the field of application of up-and-coming nanostructures in environmental applications.

A strategy for fast anammox biofilm formation under mainstream conditions

One of the bottlenecks to applying anaerobic ammonium oxidation (Anammox) is the long start-up time, especially under mainstream conditions. This study proposed a strategy for fast anammox biofilm formation under mainstream conditions. By first cultivating an aerobic heterotrophic biofilm, and then transferring to anoxic conditions, a pre-cultivated heterotrophic biofilm can be formed in 12 days. The pre-cultivated heterotrophic biofilm then functions as a "glue" to accelerate anammox bacteria adhesion and biofilm formation. Secondary settled effluent with externally added 15-30 mg-N·L^-1 ammonium and nitrite was applied as reactor influent. With a single inoculation of suspended growth anammox-laden biomass and no bioaugmentation, an anammox-enriched biofilm formed after 5 months of operation under uncontrolled temperature of 15-20 °C. Both the nitrogen removal rate and specific anammox activity exponentially increased over the course of study, corresponding to an estimated anammox doubling time of 10.8 days. The biofilm thickness on primed carriers was 2-3 times higher than on the non-primed carriers over the first 5 months of operation, and the hszA gene copy number in primed biofilms revealed was consistently 1 to 2 times higher than the non-primed carrier biofilm, indicating that biofil m carrier priming via selection for a pre-cultivated heterotrophic biofilm base can effectively improve the anammox enrichment rate at early stages of reactor operation. Time, rather than the type of biofilm (primed versus non-primed), had a stronger influence on microbial community structure over the full 230 days of reactor operation. Candidatus Brocadia was the only detected anammox bacteria genus. Overall, pre-cultivation of heterotrophs on biofilm carriers provides a simple route to accelerate anammox-enriched biofilm formation under mainstream conditions.

A novel biosensor-based method for the detection of p-nitrophenol in agricultural soil

Directly measurement of the bioavailable concentration of soil contaminants is essential for their accurate risk assessment. In this study, we successfully modified and identified the key genetic elements (pobR1-3) for the bio-detection of p-nitrophenol and synthesized five novel whole-cell biosensors (Escherichia coli BL21/pPNP-mrfp, E. coli BL21/pPNP-CFP, E. coli BL21/pPNP-YFP, E. coli BL21/pPNP-GFP, and E. coli BL21/pPNP-amilCP) to directly detect the concentration of p-nitrophenol in soils. These biosensor methods contained a simple biosensor activation and sample extraction step, a cost-effective detection means, and a fast detection process (5 h) by using a 96-microwell plate with a low background value and high-reliability equation for p-nitrophenol detection. These biosensors had a detection limit of 6.21-25.2 μg/kg and a linear range of 10-10000 μg/kg for p-nitrophenol in four soils. All biosensors showed better detection performance in the detection of p-nitrophenol in soil samples. The biosensors method can help to quickly and directly assess the actual bioavailable fractions of p-nitrophenol in soils, thus facilitating to understand the environmental cycling of p-nitrophenol.

Microbial community and carbon-nitrogen metabolism pathways in integrated vertical flow constructed wetlands treating wastewater containing antibiotics

This study demonstrates effects of sulfamethoxazole (SMX) on carbon-nitrogen transformation pathways and microbial community and metabolic function response mechanisms in constructed wetlands. Findings showed co-metabolism of SMX with organic pollutants resulted in high removal of 98.92 ± 0.25% at influent concentrations of 103.08 ± 13.70 μg/L (SMX) and 601.92 ± 22.69 mg/L (COD), and 2 d hydraulic retention. Microbial community, co-occurrence networks, and metabolic pathways analyses showed SMX promoted enrichment of COD and SMX co-metabolizing bacteria like Mycobacterium, Chryseobacterium and Comamonas. Relative abundances of co-metabolic pathways like Amino acid, carbohydrate, and Xenobiotics biodegradation and metabolism were elevated. SMX also increased relative abundances of the resistant heterotrophic nitrification-aerobic denitrification bacteria Paracoccus and Comamonas and functional genes nxrA, narI, norC and nosZ involved in simultaneous heterotrophic nitrification-aerobic denitrification. Consequently, denitrification rate increased by 1.30 mg/(L∙d). However, insufficient reaction substrate and accumulation of 15.29 ± 2.30 mg/L NO₃^--N exacerbate inhibitory effects of SMX on expression of some denitrification genes.

Impact of microbial inoculants combined with humic acid on the fate of estrogens during pig manure composting under low-temperature conditions

To investigate the efficiency of psychrotrophic cellulose-degrading fungal strains (PCDFSs) and estrogen-degrading bacteria (EDBs) combined with humic acid (HA) on estrone (E1) and 17-β-estradiol (E2) degradation, five compost groups (T, HA, EDB, PCDFS, and CK) were prepared and composted for 32 days at 11-14°C. The results indicated that inoculation increased the temperature to 62.2°C and promoted E1 degradation to the lowest level of 100.1 ng/kg, while E2 was undetected from day 16. Metagenomic analysis revealed that inoculation altered the microbial community structure by increasing the abundance of cellulose-degrading fungi, especially Meyerozyma (16.7%) (among PCDFSs), and of estrogen-degrading bacteria, particularly Microbacterium (13.4%) (involved in EDBs). Moreover, inoculation increased the levels (>0.500%) of Gene Ontology (GO) associated with estrogen degradation, like 3-β-hydroxy-delta 5-steroid dehydrogenase and monooxygenase. Redundancy analysis demonstrated that temperature and Microbacterium were positively correlated with estrogen degradation. Structural equation model indicated that temperature and estrogen-degrading bacterial genera exhibited positive, significant (p < 0.001) and direct impacts on estrogen degradation. This is the first study to suggest that applying microbial inoculants and HA could accelerate estrogen degradation during composting in cold regions. The research outcomes offer a practical reference for managing compost safety, thereby decreasing its potential environmental and human health impacts.