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McPeak JE, Segantini M, Marcozzi G, Dona I, Künstner S, Chu A, Kern M, Poncelet M, Driesschaert B, Anders J, Lips K. Operando detection of dissolved oxygen in fluid solution using a submersible rapid scan EPR on a chip dipstick sensor. Sci Rep 2025; 15:9872. [PMID: 40119031 PMCID: PMC11928686 DOI: 10.1038/s41598-025-93591-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2024] [Accepted: 03/07/2025] [Indexed: 03/24/2025] Open
Abstract
Electron paramagnetic resonance (EPR) is an accurate and efficient technique to probe unpaired electrons in many applications across materials science, chemistry, and biology. Dynamic processes are investigated using EPR; however, these applications are limited by the use of resonator-based spectrometers such that the entire process must be confined to the resonator. The EPR-on-a-chip (EPRoC) device circumvents this limitation by integrating the entire EPR spectrometer into a single microchip. In this approach, the coil of a voltage-controlled oscillator (VCO) is used as the microwave source and detector simultaneously, operating under a protective coating such that the device may be placed in the sample solution directly. Additionally, improvements in sensitivity via rapid scan EPR (RS-EPR/RS-EPRoC) increase the accessible applications where SNR per measurement time is the fundamental limit. The herein reported device combines a dipstick EPRoC sensor with the enhanced sensitivity of frequency-swept frequency modulated rapid scan to measure triarylmethyl (trityl, Ox071) oxygen-sensitive probes dissolved in aqueous solutions. EPR spectra of Ox071 solutions were recorded using the RS-EPRoC sensor while varying the oxygen concentration of the solution between normal atmosphere and after purging the solution with nitrogen gas. We demonstrate that EPRoC may be employed to monitor dissolved oxygen in fluid solution in an online fashion.
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Affiliation(s)
- Joseph E McPeak
- Berlin Joint EPR Laboratory and EPR4Energy, Department Spins in Energy Conversion and Quantum Information Science (ASPIN), Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Berlin, Germany.
- Department of Chemistry, Novo Nordisk Foundation Pulse EPR Center, University of Copenhagen, Copenhagen, Denmark.
| | - Michele Segantini
- Berlin Joint EPR Laboratory and EPR4Energy, Department Spins in Energy Conversion and Quantum Information Science (ASPIN), Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Berlin, Germany
| | - Gianluca Marcozzi
- Berlin Joint EPR Laboratory and EPR4Energy, Department Spins in Energy Conversion and Quantum Information Science (ASPIN), Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Berlin, Germany
| | - Irene Dona
- Berlin Joint EPR Laboratory and EPR4Energy, Department Spins in Energy Conversion and Quantum Information Science (ASPIN), Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Berlin, Germany
| | - Silvio Künstner
- Berlin Joint EPR Laboratory and EPR4Energy, Department Spins in Energy Conversion and Quantum Information Science (ASPIN), Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Berlin, Germany
| | - Anh Chu
- Institute of Smart Sensors, Universität Stuttgart, Stuttgart, Germany
| | - Michal Kern
- Institute of Smart Sensors, Universität Stuttgart, Stuttgart, Germany
| | - Martin Poncelet
- Department of Pharmaceutical Sciences, School of Pharmacy, West Virginia University, Morgantown, WV, USA
- In Vivo Multifunctional Magnetic Resonance Center, Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV, USA
| | - Benoit Driesschaert
- Department of Pharmaceutical Sciences, School of Pharmacy, West Virginia University, Morgantown, WV, USA
- In Vivo Multifunctional Magnetic Resonance Center, Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV, USA
| | - Jens Anders
- Institute of Smart Sensors, Universität Stuttgart, Stuttgart, Germany
- Center for Integrated Quantum Science and Technology (IQST), Stuttgart and Ulm, Germany
| | - Klaus Lips
- Berlin Joint EPR Laboratory and EPR4Energy, Department Spins in Energy Conversion and Quantum Information Science (ASPIN), Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Berlin, Germany
- Berlin Joint EPR Laboratory, Fachbereich Physik, Freie Universität Berlin, Berlin, Germany
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Price BD, Sojka A, Maity S, Chavez IM, Starck M, Wilson MZ, Han S, Sherwin MS. Field-domain rapid-scan EPR at 240GHz for studies of protein functional dynamics at room temperature. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2024; 366:107744. [PMID: 39096714 DOI: 10.1016/j.jmr.2024.107744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Revised: 07/22/2024] [Accepted: 07/24/2024] [Indexed: 08/05/2024]
Abstract
We present field-domain rapid-scan (RS) electron paramagnetic resonance (EPR) at 8.6T and 240GHz. To enable this technique, we upgraded a home-built EPR spectrometer with an FPGA-enabled digitizer and real-time processing software. The software leverages the Hilbert transform to recover the in-phase (I) and quadrature (Q) channels, and therefore the raw absorptive and dispersive signals, χ' and χ'', from their combined magnitude (I2+Q2). Averaging a magnitude is simpler than real-time coherent averaging and has the added benefit of permitting long-timescale signal averaging (up to at least 2.5×106 scans) because it eliminates the effects of source-receiver phase drift. Our rapid-scan (RS) EPR provides a signal-to-noise ratio that is approximately twice that of continuous wave (CW) EPR under the same experimental conditions, after scaling by the square root of acquisition time. We apply our RS EPR as an extension of the recently reported time-resolved Gd-Gd EPR (TiGGER) [Maity et al., 2023], which is able to monitor inter-residue distance changes during the photocycle of a photoresponsive protein through changes in the Gd-Gd dipolar couplings. RS, opposed to CW, returns field-swept spectra as a function of time with 10ms time resolution, and thus, adds a second dimension to the static field transients recorded by TiGGER. We were able to use RS TiGGER to track time-dependent and temperature-dependent kinetics of AsLOV2, a light-activated phototropin domain found in oats. The results presented here combine the benefits of RS EPR with the improved spectral resolution and sensitivity of Gd chelates at high magnetic fields. In the future, field-domain RS EPR at high magnetic fields may enable studies of other real-time kinetic processes with time resolutions that are otherwise difficult to access in the solution state.
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Affiliation(s)
- Brad D Price
- Department of Physics, University of California, Santa Barbara, 93106, CA, USA; Institute for Terahertz Science and Technology, University of California, Santa Barbara, 93106, CA, USA.
| | - Antonín Sojka
- Department of Physics, University of California, Santa Barbara, 93106, CA, USA; Institute for Terahertz Science and Technology, University of California, Santa Barbara, 93106, CA, USA
| | - Shiny Maity
- Department of Chemistry, University of California, Santa Barbara, 93106, CA, USA; Department of Chemistry, Northwestern University, 633 Clark Street, Evanston, 60208, IL, USA
| | - I Marcelo Chavez
- Department of Chemistry, University of California, Santa Barbara, 93106, CA, USA
| | - Matthieu Starck
- Department of Chemistry, Durham University, Durham, DH13LE, UK
| | - Maxwell Z Wilson
- Department Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, 93106, CA, USA
| | - Songi Han
- Department of Chemistry, University of California, Santa Barbara, 93106, CA, USA; Department of Chemistry, Northwestern University, 633 Clark Street, Evanston, 60208, IL, USA
| | - Mark S Sherwin
- Department of Physics, University of California, Santa Barbara, 93106, CA, USA; Institute for Terahertz Science and Technology, University of California, Santa Barbara, 93106, CA, USA.
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Wehbi M, Harkemanne E, Mignion L, Joudiou N, Tromme I, Baurain JF, Gallez B. Towards Characterization of Skin Melanoma in the Clinic by Electron Paramagnetic Resonance (EPR) Spectroscopy and Imaging of Melanin. Mol Imaging Biol 2024; 26:382-390. [PMID: 37389709 PMCID: PMC11211150 DOI: 10.1007/s11307-023-01836-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Revised: 06/05/2023] [Accepted: 06/23/2023] [Indexed: 07/01/2023]
Abstract
The incidence of melanoma is continuously increasing over time. Melanoma is the most aggressive skin cancer, significantly reducing quality of life and survival rates of patients at advanced stages. Therefore, early diagnosis remains the key to change the prognosis of patients with melanoma. In this context, advanced technologies are under evaluation to increase the accuracy of the diagnostic, to better characterize the lesions and visualize their possible invasiveness in the epidermis. Among the innovative methods, because melanin is paramagnetic, clinical low frequency electron paramagnetic resonance (EPR) that characterizes the melanin content in the lesion has the potential to be an adjunct diagnostic method of melanoma. In this review, we first summarize the challenges faced by dermatologists and oncologists in melanoma diagnostic and management. We also provide a historical perspective on melanin detection with a focus on EPR spectroscopy/imaging of melanomas. We describe key elements that allow EPR to move from in vitro studies to in vivo and finally to patients for melanoma studies. Finally, we provide a critical view on challenges to meet to make EPR operational in the clinic to characterize pigmented lesions.
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Affiliation(s)
- Mohammad Wehbi
- Biomedical Magnetic Resonance Research Group, Louvain Drug Research Institute, Université catholique de Louvain (UCLouvain), Avenue Mounier 73.08, B -, 1200, Brussels, Belgium
| | - Evelyne Harkemanne
- Department of Dermatology, Melanoma Clinic, King Albert II Institute, St Luc Hospital, Université catholique de Louvain (UCLouvain), Brussels, Belgium
| | - Lionel Mignion
- Nuclear and Electron Spin Technologies (NEST) Platform, Louvain Drug Research Institute, |Université catholique de Louvain (UCLouvain), Brussels, Belgium
| | - Nicolas Joudiou
- Nuclear and Electron Spin Technologies (NEST) Platform, Louvain Drug Research Institute, |Université catholique de Louvain (UCLouvain), Brussels, Belgium
| | - Isabelle Tromme
- Department of Dermatology, Melanoma Clinic, King Albert II Institute, St Luc Hospital, Université catholique de Louvain (UCLouvain), Brussels, Belgium
| | - Jean-François Baurain
- Department of Oncology, Melanoma Clinic, King Albert II Institute, St Luc Hospital, Université catholique de Louvain (UCLouvain), Brussels, Belgium
| | - Bernard Gallez
- Biomedical Magnetic Resonance Research Group, Louvain Drug Research Institute, Université catholique de Louvain (UCLouvain), Avenue Mounier 73.08, B -, 1200, Brussels, Belgium.
- Nuclear and Electron Spin Technologies (NEST) Platform, Louvain Drug Research Institute, |Université catholique de Louvain (UCLouvain), Brussels, Belgium.
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Oba M, Taguchi M, Kudo Y, Yamashita K, Yasui H, Matsumoto S, Kirilyuk IA, Inanami O, Hirata H. Partial Acquisition of Spectral Projections Accelerates Four-dimensional Spectral-spatial EPR Imaging for Mouse Tumor Models: A Feasibility Study. Mol Imaging Biol 2024; 26:459-472. [PMID: 38811467 DOI: 10.1007/s11307-024-01924-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Revised: 05/16/2024] [Accepted: 05/20/2024] [Indexed: 05/31/2024]
Abstract
PURPOSE Our study aimed to accelerate the acquisition of four-dimensional (4D) spectral-spatial electron paramagnetic resonance (EPR) imaging for mouse tumor models. This advancement in EPR imaging should reduce the acquisition time of spectroscopic mapping while reducing quality degradation for mouse tumor models. PROCEDURES EPR spectra under magnetic field gradients, called spectral projections, were partially measured. Additional spectral projections were later computationally synthesized from the measured spectral projections. Four-dimensional spectral-spatial images were reconstructed from the post-processed spectral projections using the algebraic reconstruction technique (ART) and assessed in terms of their image qualities. We applied this approach to a sample solution and a mouse Hs766T xenograft model of human-derived pancreatic ductal adenocarcinoma cells to demonstrate the feasibility of our concept. The nitroxyl radical imaging agent 2H,15N-DCP was exogenously infused into the mouse xenograft model. RESULTS The computation code of 4D spectral-spatial imaging was tested with numerically generated spectral projections. In the linewidth mapping of the sample solution, we achieved a relative standard uncertainty (standard deviation/| mean |) of 0.76 μT/45.38 μT = 0.017 on the peak-to-peak first-derivative EPR linewidth. The qualities of the linewidth maps and the effect of computational synthesis of spectral projections were examined. Finally, we obtained the three-dimensional linewidth map of 2H,15N-DCP in a Hs766T tumor-bearing leg in vivo. CONCLUSION We achieved a 46.7% reduction in the acquisition time of 4D spectral-spatial EPR imaging without significantly degrading the image quality. A combination of ART and partial acquisition in three-dimensional raster magnetic field gradient settings in orthogonal coordinates is a novel approach. Our approach to 4D spectral-spatial EPR imaging can be applied to any subject, especially for samples with less variation in one direction.
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Affiliation(s)
- Misa Oba
- Division of Bioengineering and Bioinformatics, Graduate School of Information Science and Technology, Hokkaido University, North 14, West 9, Kita-ku, Sapporo, 060-0814, Japan
| | - Mai Taguchi
- Division of Bioengineering and Bioinformatics, Graduate School of Information Science and Technology, Hokkaido University, North 14, West 9, Kita-ku, Sapporo, 060-0814, Japan
| | - Yohei Kudo
- Division of Bioengineering and Bioinformatics, Graduate School of Information Science and Technology, Hokkaido University, North 14, West 9, Kita-ku, Sapporo, 060-0814, Japan
| | - Koya Yamashita
- Laboratory of Radiation Biology, Graduate School of Veterinary Medicine, Hokkaido University, North 18, West 9, Kita-ku, Sapporo, 060-0818, Japan
| | - Hironobu Yasui
- Laboratory of Radiation Biology, Faculty of Veterinary Medicine, Hokkaido University, North 18, West 9, Kita-ku, Sapporo, 060-0818, Japan
| | - Shingo Matsumoto
- Division of Bioengineering and Bioinformatics, Faculty of Information Science and Technology, Hokkaido University, North 14, West 9, Kita-ku, Sapporo, 060-0814, Japan
| | - Igor A Kirilyuk
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, 9, Ac. Lavrentieva Ave, Novosibirsk, 630090, Russia
| | - Osamu Inanami
- Laboratory of Radiation Biology, Faculty of Veterinary Medicine, Hokkaido University, North 18, West 9, Kita-ku, Sapporo, 060-0818, Japan
| | - Hiroshi Hirata
- Division of Bioengineering and Bioinformatics, Faculty of Information Science and Technology, Hokkaido University, North 14, West 9, Kita-ku, Sapporo, 060-0814, Japan.
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Epel B, Kao JPY, Eaton SS, Eaton GR, Halpern HJ. Direct Measurement and Imaging of Redox Status with Electron Paramagnetic Resonance. Antioxid Redox Signal 2024; 40:850-862. [PMID: 36680741 PMCID: PMC11386996 DOI: 10.1089/ars.2022.0216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Significance: Fundamental to the application of tissue redox status to human health is the quantification and localization of tissue redox abnormalities and oxidative stress and their correlation with the severity and local extent of disease to inform therapy. The centrality of the low-molecular-weight thiol, glutathione, in physiological redox balance has long been appreciated, but direct measurement of tissue thiol status in vivo has not been possible hitherto. Recent advances in instrumentation and molecular probes suggest the feasibility of real-time redox assessment in humans. Recent Advances: Recent studies have demonstrated the feasibility of using low-frequency electron paramagnetic resonance (EPR) techniques for quantitative imaging of redox status in mammalian tissues in vivo. Rapid-scan (RS) EPR spectroscopy and imaging, new disulfide-dinitroxide spin probes, and novel analytic techniques have led to significant advances in direct, quantitative imaging of thiol redox status. Critical Issues: While novel RS EPR imaging coupled with first-generation molecular probes has demonstrated the feasibility of imaging thiol redox status in vivo, further technical advancements are desirable and ongoing. These include developing spin probes that are tailored for specific tissues with response kinetics tuned to the physiological environment. Equally critical are RS instrumentation with higher signal-to-noise ratio and minimal signal distortion, as well as optimized imaging protocols for image acquisition with sparsity adapted to image information content. Future Directions: Quantitative images of tissue glutathione promise to enable acquisition of a general image of mammalian and potentially human tissue health.
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Affiliation(s)
- Boris Epel
- Department of Radiation and Cellular Oncology, Center for EPR Imaging In Vivo Physiology, University of Chicago, Chicago, Illinois, USA
| | - Joseph P Y Kao
- Center for Biomedical Engineering and Technology, Department of Physiology, University of Maryland School of Medicine, Baltimore, Maryland, USA
| | - Sandra S Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, USA
| | - Gareth R Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, USA
| | - Howard J Halpern
- Department of Radiation and Cellular Oncology, Center for EPR Imaging In Vivo Physiology, University of Chicago, Chicago, Illinois, USA
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Sato-Akaba H, Sakai T, Hirata H. Generation of transmission wave with low AM noise for sub-GHz CW-EPR spectrometer. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2024; 360:107633. [PMID: 38394999 DOI: 10.1016/j.jmr.2024.107633] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Revised: 01/13/2024] [Accepted: 02/05/2024] [Indexed: 02/25/2024]
Abstract
This study describes a technique to clean amplitude modulation (AM) noise of RF transmission waves, which is used to observe the sub-GHz CW-EPR spectrum. An RF transmitter amplifier that has the function of cleaning AM noise has been developed. Cleaning of the AM noise was owing to saturation of the output at the amplifier. Three stages of the amplifiers in series could effectively suppress the AM noise to about -176 dBc/Hz and -183 dBc/Hz at offset frequency of 10 kHz and 100 kHz, respectively at the carrier frequency of 750 MHz and the output power of 29 dBm. Since phase modulation (PM) noise is suppressed by phase sensitive detection, the AM noise in the transmission is dominant cause of the noise in the sub-GHz CW-EPR absorption spectrum using a reflection bridge, which depends on the quality factor of the resonator and the power of the RF transmission. The additive phase modulation (PM) noise of this amplifier was -171 dBc/Hz at an offset frequency of 100 kHz, which indicated that the frequency modulation (FM) of the transmission wave was not distorted with this amplifier. Therefore, conventional CW-EPR spectrometers that typically require FM for automatic frequency control or automatic tunning control can use this technique to increase sensitivity.
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Affiliation(s)
- Hideo Sato-Akaba
- Department of Systems Innovation, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan.
| | - Tsukasa Sakai
- Department of Systems Innovation, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | - Hiroshi Hirata
- Division of Bioengineering and Bioinformatics, Faculty of Information Science and Technology, Hokkaido University, North 14, West 9, Kita-ku, Sapporo 060-0814, Japan
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O'Connell RC, Tseytlin O, Bobko AA, Eubank TD, Tseytlin M. Rapid scan EPR: Automated digital resonator control for low-latency data acquisition. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2022; 345:107308. [PMID: 36356489 PMCID: PMC10266206 DOI: 10.1016/j.jmr.2022.107308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2022] [Revised: 10/05/2022] [Accepted: 10/06/2022] [Indexed: 06/05/2023]
Abstract
Automation has become an essential component of modern scientific instruments which often capture large amounts of complex dynamic data. Algorithms are developed to read multiple sensors in parallel with data acquisition and to adjust instrumental parameters on the fly. Decisions are made on a time scale unattainable to the human operator. In addition to speed, automation reduces human error, improves the reproducibility of experiments, and improves the reliability of acquired data. An automatic digital control (ADiC) was developed to reliably sustain critical coupling of a resonator over a wide range of time-varying loading conditions. The ADiC uses the computational power of a microcontroller that directly communicates with all system components independent of a personal computer (PC). The PC initiates resonator tuning and coupling by sending a command to MC via serial port. After receiving the command, ADiC establishes critical coupling conditions within approximately 5 ms. A printed circuit board resonator was designed to permit digital control. The performance of the resonator together with the ADiC was evaluated by varying the resonator loading from empty to heavily loaded. For the loading, samples containing aqueous sodium chloride that strongly absorb electromagnetic waves were used. A previously reported rapid scan (RS) electron paramagnetic resonance (EPR) imaging instrument was upgraded by the incorporation of ADiC. RS spectra and an in vivo image of oxygen in a mouse tumor model have been acquired using the upgraded system. ADiC robustly sustained critical coupling of the resonator to the transmission line during these measurements. The design implemented in this study can be used in slow-scan and pulsed EPR with modifications.
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Affiliation(s)
- Ryan C O'Connell
- Department of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, WV 26506, USA; In Vivo Multifunctional Magnetic Resonance Center at Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506, USA
| | - Oxana Tseytlin
- Department of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, WV 26506, USA; In Vivo Multifunctional Magnetic Resonance Center at Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506, USA
| | - Andrey A Bobko
- Department of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, WV 26506, USA; In Vivo Multifunctional Magnetic Resonance Center at Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506, USA
| | - Timothy D Eubank
- In Vivo Multifunctional Magnetic Resonance Center at Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506, USA; Department of Microbiology, Immunology and Cell Biology, West Virginia University, Morgantown, WV 26506, USA
| | - Mark Tseytlin
- Department of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, WV 26506, USA; West Virginia University Cancer Institute, Morgantown, WV 26506, USA; In Vivo Multifunctional Magnetic Resonance Center at Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506, USA.
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Abstract
Progress has been made in hardware for low frequencies, demonstrations of rapid frequency scans, hybrid instrumentation, and improved deconvolution software. The recent availability of the commercial Bruker BioSpin rapid scan accessory for their X-band EMX and Elexsys systems makes this technique available to a wide range of users without the need to construct their own system. Developments at lower frequencies are underway in several labs with the goal of facilitating in vivo and preclinical rapid scan imaging. Development of new deconvolution algorithms will make data processing more robust. Frequency scans have substantial promise at higher frequencies. New examples of applications show the wide applicability and advantages of rapid scan.
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Affiliation(s)
- Gareth R Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO, United States.
| | - Sandra S Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO, United States
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Site directed spin labeling to elucidating the mechanism of the cyanobacterial circadian clock. Methods Enzymol 2022; 666:59-78. [PMID: 35465929 DOI: 10.1016/bs.mie.2022.02.011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electron Paramagnetic Resonance (EPR) is a spectroscopic technique that provides structural and dynamic information on unpaired spins and their surrounding environments. Introduction of exogenous spin labels via site directed spin labeling (SDSL) enables characterization of systems of interests lacking intrinsic unpaired spins. This chapter describes the use of SDSL in quantifying KaiB-KaiC binding in the cyanobacterial circadian clock (Kai Clock), exploiting the changes in mobility of the local environment around the spin label on KaiB-KaiC interactions. While the Kai system serves as our model system to demonstrate SDSL-EPR utility in quantifying protein-protein interactions, this technique is readily amenable to other systems of interest whenever specific protein-protein interactions need to be isolated. We first present a protocol for spin labeling KaiB. Then, we detail the sample preparation and acquisition processes to maximize signal-to-noise for downstream analysis. We close this chapter by highlighting recent advances in SDSL technology to incorporate spin labels into proteins of interest and in EPR technology to improve detection sensitivity that may allow greater flexibilities to the types of experiments possible.
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Rane V. Harnessing Electron Spin Hyperpolarization in Chromophore-Radical Spin Probes for Subcellular Resolution in Electron Paramagnetic Resonance Imaging: Concept and Feasibility. J Phys Chem B 2022; 126:2715-2728. [PMID: 35353514 DOI: 10.1021/acs.jpcb.1c10920] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Obtaining a subcellular resolution for biological samples doped with stable radicals at room temperature (RT) is a long-sought goal in electron paramagnetic resonance imaging (EPRI). The spatial resolution in current EPRI methods is constrained either because of low electron spin polarization at RT or the experimental limitations associated with the field gradients and the radical linewidth. Inspired by the recent demonstration of a large electron spin hyperpolarization in chromophore-nitroxyl spin probe molecules, the present work proposes a novel optically hyperpolarized EPR imaging (OH-EPRI) method, which combines the optical method of two-photon confocal microscopy for hyperpolarization generation and the rapid scan (RS) EPR method for signal detection. An important aspect of OH-EPRI is that it is not limited by the abovementioned restrictions of conventional EPRI since the large hyperpolarization in the spin probes overcomes the poor thermal spin polarization at RT, and the use of two-photon optical excitation of the chromophore naturally generates the required spatial resolution, without the need for any magnetic field gradient. Simulations based on time-dependent Bloch equations, which took into account both the RS field modulation and the hyperpolarization generation by optical means, were performed to examine the feasibility of OH-EPRI. The simulation results revealed that a spatial resolution of up to 2 fL can be achieved in OH-EPRI at RT under in vitro conditions. Notably, the majority of the requirements for an OH-EPRI experiment can be fulfilled by the currently available technologies, thereby paving the way for its easy implementation. Thus, the proposed method could potentially bridge the sensitivity gap between the optical and magnetic imaging techniques.
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Affiliation(s)
- Vinayak Rane
- Radiochemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
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Weaver J, Liu KJ. A Review of Low-Frequency EPR Technology for the Measurement of Brain pO2 and Oxidative Stress. APPLIED MAGNETIC RESONANCE 2021; 52:1379-1394. [PMID: 35340811 PMCID: PMC8945541 DOI: 10.1007/s00723-021-01384-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Revised: 06/24/2021] [Accepted: 06/30/2021] [Indexed: 06/14/2023]
Abstract
EPR can uniquely measure paramagnetic species. Although commercial EPR was introduced in 1950s, the early studies were mostly restricted to chemicals in solution or cellular experiments using X-band EPR equipment. Due to its limited penetration (<1 mm), experiments with living animals were almost impossible. To overcome these difficulties, Swartz group, along with several other leaders in field, pioneered the technology of low frequency EPR (e.g., L-band, 1-2 GHz). The development of low frequency EPR and the associated probes have dramatically expanded the application of EPR technology into the biomedical research field, providing answers to important scientific questions by measuring specific parameters that are impossible or very difficult to obtain by other approaches. In this review, which is aimed at highlighting the seminal contribution from Swartz group over the last several decades, we will focus on the development of EPR technology that was designed to deal with the potential challenges arising from conducting EPR spectroscopy in living animals. The second half of the review will be concentrated on the application of low frequency EPR in measuring cerebral tissue pO2 changes and oxidative stress in various physiological and pathophysiological conditions in the brain of animal disease models.
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Affiliation(s)
- John Weaver
- Department of Pharmaceutical Sciences, College of Pharmacy, University of New Mexico Health Sciences Center, Albuquerque, NM 87131
| | - Ke Jian Liu
- Department of Pharmaceutical Sciences, College of Pharmacy, University of New Mexico Health Sciences Center, Albuquerque, NM 87131
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Samouilov A, Komarov D, Petryakov S, Iosilevich A, Zweier JL. Development of an L-band resonator optimized for fast scan EPR imaging of the mouse head. Magn Reson Med 2021; 86:2316-2327. [PMID: 33938574 PMCID: PMC8295191 DOI: 10.1002/mrm.28821] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 04/07/2021] [Accepted: 04/08/2021] [Indexed: 12/11/2022]
Abstract
PURPOSE To develop a novel resonator for high-quality fast scan electron paramagnetic resonance (EPR) and EPR/NMR co-imaging of the head and brain of mice at 1.25 GHz. METHODS Resonator dimensions were scaled to fit the mouse head with maximum filling factor. A single-loop 6-gap resonator of 20 mm diameter and 20 mm length was constructed. High resonator stability was achieved utilizing a fixed position double coupling loop. Symmetrical mutually inverted connections rendered it insensitive to field modulation and fast scan. Coupling adjustment was provided by a parallel-connected variable capacitor located at the feeding line at λ/4 distance. To minimize radiation loss, the shield around the resonator was supplemented with a planar conductive disc that focuses return magnetic flux. RESULTS Coupling of the resonator loaded with the mouse head was efficient and easy. This resonator enabled high-quality in vivo 3D EPR imaging of the mouse head following intravenous infusion of nitroxide probes. With this resonator and rapid scan EPR system, 4 ms scans were acquired in forward and reverse directions so that images with 2-scan 3,136 projections were acquired in 25 s. Head images were achieved with resolutions of 0.4 mm, enabling visualization of probe localization and uptake across the blood-brain barrier. CONCLUSIONS This resonator design provides good sensitivity, high stability, and B1 field homogeneity for in vivo fast scan EPR of the mouse head and brain, enabling faster measurements and higher resolution imaging of probe uptake, localization, and metabolism than previously possible.
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Affiliation(s)
- Alexandre Samouilov
- Davis Heart and Lung Research Institute, and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, OH 43210 USA
| | - Denis Komarov
- Davis Heart and Lung Research Institute, and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, OH 43210 USA
| | - Sergey Petryakov
- Davis Heart and Lung Research Institute, and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, OH 43210 USA
| | - Arkadiy Iosilevich
- Davis Heart and Lung Research Institute, and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, OH 43210 USA
| | - Jay L. Zweier
- Davis Heart and Lung Research Institute, and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, OH 43210 USA
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13
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McPeak J, Höfer P, Kacprzak S, Carl P, Weber R, Eaton SS, Eaton GR. Rapid-Scan Electron Paramagnetic Resonance of Highly Resolved Hyperfine Lines in Organic Radicals. Chemphyschem 2020; 21:2564-2570. [PMID: 32935420 PMCID: PMC12053915 DOI: 10.1002/cphc.202000701] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 09/09/2020] [Indexed: 11/12/2022]
Abstract
X-band (ca. 9 GHz) fluid solution rapid-scan electron paramagnetic resonance spectra are reported for radicals with multiline spectra and resolution of hyperfine lines as narrow as 30 mG. Highly-resolved spectra of 3-carbamoyl-2,2,5,5-tetramethylpyrrolidin-1-yloxy, diphenylnitroxide, galvinoxyl, and perylene cation radical with excellent signal-to-noise are shown, demonstrating the capabilities of the rapid-scan technique to characterize very small, well-resolved hyperfine couplings. To acquire high resolution spectra the signal bandwidth must be less than the resonator bandwidth. Signal bandwidth is inversely proportional to linewidth and proportional to scan rate. Resonator bandwidth is inversely proportional to resonator Q. Proper selection of scan rate and resonator Q is needed to achieve resolution of closely-spaced narrow EPR lines.
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Affiliation(s)
- Joseph McPeak
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80210, USA
| | - Peter Höfer
- Bruker Biospin GMBH, Silberstreifen 4, Rheinstetten, Germany
| | - Sylwia Kacprzak
- Bruker Biospin GMBH, Silberstreifen 4, Rheinstetten, Germany
| | - Patrick Carl
- Bruker Biospin GMBH, Silberstreifen 4, Rheinstetten, Germany
| | - Ralph Weber
- Bruker BioSpin Corporation, Billerica, MA 01821, USA
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80210, USA
| | - Gareth R. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80210, USA
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14
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Tseytlin O, Bobko AA, Tseytlin M. Rapid Scan EPR imaging as a Tool for Magnetic Field Mapping. APPLIED MAGNETIC RESONANCE 2020; 51:1117-1124. [PMID: 33642700 PMCID: PMC7909464 DOI: 10.1007/s00723-020-01238-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 07/24/2020] [Indexed: 06/05/2023]
Abstract
Functional four-dimensional spectral-spatial electron paramagnetic imaging (EPRI) is routinely used in biomedical research. Positions and widths of EPR lines in the spectral dimension report oxygen partial pressure, pH, and other important parameters of the tissue microenvironment. Images are measured in the homogeneous external magnetic field. An application of EPRI is proposed in which the field is perturbed by a magnetized object. A proof-of-concept imaging experiment was conducted, which permitted visualization of the magnetic field created by this object. A single-line lithium octa-n-butoxynaphthalocyanine spin probe was used in the experiment. The spectral position of the EPR line directly measured the strength of the perturbation field with spatial resolution. A three-dimensional magnetic field map was reconstructed as a result. Several applications of this technology can be anticipated. First is EPRI/MPI co-registration, where MPI is an emerging magnetic particle imaging technique. Second, EPRI can be an alternative to magnetic field cameras that are used for the development of high-end permanent magnets and their assemblies, consumer electronics, and industrial sensors. Besides the high resolution of magnetic field readings, EPR probes can be placed in the internal areas of various assemblies that are not accessible by the standard sensors. Third, EPRI can be used to develop systems for magnetic manipulation of cell cultures.
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Affiliation(s)
- Oxana Tseytlin
- Department of Biochemistry, West Virginia University,
Morgantown, WV 26506, USA
- In Vivo Multifunctional Magnetic Resonance center at Robert
C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506,
USA
| | - Andrey A. Bobko
- Department of Biochemistry, West Virginia University,
Morgantown, WV 26506, USA
- In Vivo Multifunctional Magnetic Resonance center at Robert
C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506,
USA
| | - Mark Tseytlin
- Department of Biochemistry, West Virginia University,
Morgantown, WV 26506, USA
- West Virginia University Cancer Institute, Morgantown, WV
26506, USA
- In Vivo Multifunctional Magnetic Resonance center at Robert
C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506,
USA
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15
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Tseytlin M. General solution for rapid scan EPR deconvolution problem. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2020; 318:106801. [PMID: 32862080 PMCID: PMC7575242 DOI: 10.1016/j.jmr.2020.106801] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Revised: 07/27/2020] [Accepted: 07/28/2020] [Indexed: 06/05/2023]
Abstract
A general solution for the RS EPR deconvolution problem has been derived. This solution permits the use of arbitrary magnetic field scans. As a result, constraints on the current experimental designs can be lifted. For example, a trapezoidal waveform can be used to accelerate the scan rate without affecting the signal bandwidth. The assumptions made to develop the previous algorithms are mathematically validated.
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Affiliation(s)
- Mark Tseytlin
- Biochemistry Department, West Virginia University, Morgantown, WV 26506, USA; West Virginia University Cancer Institute, Morgantown, WV 26506, USA; In Vivo Multifunctional Magnetic Resonance Center at Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV 26506, USA.
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16
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Bakker MG, Fowler B, Bowman MK, Patience GS. Experimental methods in chemical engineering: Electron paramagnetic resonance spectroscopy‐EPR/ESR. CAN J CHEM ENG 2020. [DOI: 10.1002/cjce.23784] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Martin G. Bakker
- Department of Chemistry and BiochemistryThe University of Alabama Tuscaloosa Alabama USA
| | - Benjamin Fowler
- Department of Chemistry and BiochemistryThe University of Alabama Tuscaloosa Alabama USA
| | - Michael K. Bowman
- Department of Chemistry and BiochemistryThe University of Alabama Tuscaloosa Alabama USA
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17
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Chow GK, Chavan AG, Heisler JC, Chang YG, LiWang A, Britt RD. Monitoring Protein-Protein Interactions in the Cyanobacterial Circadian Clock in Real Time via Electron Paramagnetic Resonance Spectroscopy. Biochemistry 2020; 59:2387-2400. [PMID: 32453554 PMCID: PMC7346098 DOI: 10.1021/acs.biochem.0c00279] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
![]()
The cyanobacterial circadian clock
in Synechococcus elongatus consists of three proteins,
KaiA, KaiB, and KaiC. KaiA and KaiB
rhythmically interact with KaiC to generate stable oscillations of
KaiC phosphorylation with a period of 24 h. The observation of stable
circadian oscillations when the three clock proteins are reconstituted
and combined in vitro makes it an ideal system for understanding its
underlying molecular mechanisms and circadian clocks in general. These
oscillations were historically monitored in vitro by gel electrophoresis
of reaction mixtures based on the differing electrophoretic mobilities
between various phosphostates of KaiC. As the KaiC phospho-distribution
represents only one facet of the oscillations, orthogonal tools are
necessary to explore other interactions to generate a full description
of the system. However, previous biochemical assays are discontinuous
or qualitative. To circumvent these limitations, we developed a spin-labeled
KaiB mutant that can differentiate KaiC-bound KaiB from free KaiB
using continuous-wave electron paramagnetic resonance spectroscopy
that is minimally sensitive to KaiA. Similar to wild-type (WT-KaiB),
this labeled mutant, in combination with KaiA, sustains robust circadian
rhythms of KaiC phosphorylation. This labeled mutant is hence a functional
surrogate of WT-KaiB and thus participates in and reports on autonomous
macroscopic circadian rhythms generated by mixtures that include KaiA,
KaiC, and ATP. Quantitative kinetics could be extracted with improved
precision and time resolution. We describe design principles, data
analysis, and limitations of this quantitative binding assay and discuss
future research necessary to overcome these challenges.
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Affiliation(s)
- Gary K Chow
- Department of Chemistry, University of California, Davis, California 95616, United States
| | | | | | | | - Andy LiWang
- Center for Circadian Biology, University of California, San Diego, La Jolla, California 92093, United States
| | - R David Britt
- Department of Chemistry, University of California, Davis, California 95616, United States
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18
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Höfel S, Fix MK, Zwicker F, Sterpin E, Drescher M. EPR imaging of magnetic field effects on radiation dose distributions around millimeter-size air cavities. Phys Med Biol 2019; 64:175013. [PMID: 31307018 DOI: 10.1088/1361-6560/ab325b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
New hybrid radiotherapy treatment systems combining an MRI scanner with a source of ionizing radiation are being introduced in the clinic. The strong magnetic fields of MRI considerably affect radiation dose distributions, especially at tissue-air interfaces due to the electron return effect (ERE). Experimental investigation of the ERE within a sub-millimeter thick surface layer is still highly challenging. In the present work, we examine and quantify the magnetic field induced perturbations of dose distributions within a 0.5 mm layer surrounding millimeter-size air cavities by applying electron paramagnetic resonance imaging (EPRI). Air-filled fused quartz tubes (inner diameter 3 or 4 mm) mimic small air cavities and serve as model systems. The tubes were irradiated inside a PMMA phantom by a 6 MV photon beam. The irradiations were performed in the presence or absence of a transverse, magnetic field providing a magnetic field strength of 1.0 Tesla. The spatial distributions of radiation induced paramagnetic defects in the quartz tubes were subsequently determined by applying field-swept echo-detected EPRI and were then converted to relative dose distributions. The transverse magnetic field leads to considerable local dose enhancements and reductions (up to 35%) with respect to the mean dose within the quartz tubes. The experimentally determined dose distributions are in good quantitative agreement with Monte Carlo radiation transport simulations. The results of this work demonstrate the feasibility of field-swept echo-detected EPRI to measure magnetic field induced perturbations of dose distributions within a sub-millimeter thick surface layer at the dosimeter-air interface.
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Affiliation(s)
- Sebastian Höfel
- Department of Chemistry and Konstanz Research School Chemical Biology, University of Konstanz, Konstanz, Germany. Klinik und Praxis für Strahlentherapie am Klinikum Konstanz, Konstanz, Germany
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19
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Jeschke G. Quo vadis EPR? JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 306:36-41. [PMID: 31345773 DOI: 10.1016/j.jmr.2019.07.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Revised: 03/21/2019] [Accepted: 07/08/2019] [Indexed: 06/10/2023]
Abstract
Complexity of paramagnetic catalysts and materials increases, and the same applies to systems targeted by integrative structural biology. Hence, EPR spectroscopists must find ways to enhance information content of their data. I argue that a third major wave of method development in EPR spectroscopy, which is triggered by recent advances in digital electronics and computing, can achieve this. Transfer of NMR methods to EPR will go on, but part of the new EPR methodology will depend on completely new concepts.
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Affiliation(s)
- Gunnar Jeschke
- ETH Zurich, Lab. Phys. Chem., Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland.
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20
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Merging Preclinical EPR Tomography with other Imaging Techniques. Cell Biochem Biophys 2019; 77:187-196. [PMID: 31440878 PMCID: PMC6742609 DOI: 10.1007/s12013-019-00880-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Accepted: 07/30/2019] [Indexed: 12/21/2022]
Abstract
This paper presents a survey of electron paramagnetic resonance (EPR) image registration. Image registration is the process of overlaying images (two or more) of the same scene taken at different times, from different viewpoints and/or different techniques. EPR-imaging (EPRI) techniques belong to the functional-imaging modalities and therefore suffer from a lack of anatomical reference which is mandatory in preclinical imaging. For this reason, it is necessary to merging EPR images with other modalities which allow for obtaining anatomy images. Methodological analysis and review of the literature were done, providing a summary for developing a good foundation for research study in this field which is crucial in understanding the existing levels of knowledge. Out of these considerations, the aim of this paper is to enhance the scientific community’s understanding of the current status of research in EPR preclinical image registration and also communicate to them the contribution of this research in the field of image processing.
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21
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Sato-Akaba H, Tseytlin M. Development of an L-band rapid scan EPR digital console. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 304:42-52. [PMID: 31100585 PMCID: PMC7549020 DOI: 10.1016/j.jmr.2019.05.003] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 05/09/2019] [Accepted: 05/10/2019] [Indexed: 06/05/2023]
Abstract
The development of a digital console for in-vivo rapid scan electron paramagnetic resonance (RS-EPR) spectroscopy and imaging is described in detail. The console was build using field programmable gate array (FGPA) technology that permits real-time control of the resonator and scanning magnetic fields during the measurements. Automatic resonator tuning and matching are achieved by implementing a digital feedback control system and using voltage-tunable capacitors. A band-pass subsampling method is used to directly digitize EPR signals at the carrier frequencies of about 1.2 GHz. The magnetic field scan waveforms, excitation EPR frequency, and sampling clock are all internally synchronized. Full-cycle RS-EPR signals are accumulated in the FPGA in real time without any time gaps. The result is the elimination of the re-arm time, during which data are not acquired. The proposed design in this manuscript has a small footprint and is relatively low cost. The FPGA-based RS-EPR system was tested using standard LiNc-BuO and tempone-d16 samples. The RS-EPR linewidth of the LiNc-BuO sample was consistent with an independent pulsed EPR measurement.
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Affiliation(s)
- Hideo Sato-Akaba
- Department of Systems Innovation, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan.
| | - Mark Tseytlin
- Department of Biochemistry, School of Medicine, West Virginia University, Morgantown, WV, USA
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22
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Samouilov A, Ahmad R, Boslett J, Liu X, Petryakov S, Zweier JL. Development of a fast-scan EPR imaging system for highly accelerated free radical imaging. Magn Reson Med 2019; 82:842-853. [PMID: 31020713 DOI: 10.1002/mrm.27759] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Revised: 03/07/2019] [Accepted: 03/11/2019] [Indexed: 01/01/2023]
Abstract
PURPOSE In continuous wave EPR imaging, the acquisition of high-quality images was previously limited by the requisite long acquisition times of each image projection that was typically greater than 1 second. To accelerate the process of image acquisition facilitating greater numbers of projections and higher image resolution, instrumentation was developed to greatly accelerate the magnetic field scan that is used to obtain each EPR image projection. METHODS A low-inductance solenoidal coil for field scanning was used along with a spherical solenoid air core magnet, and scans were driven by triangular symmetric waves, allowing forward and reverse spectrum acquisition as rapid as 3.8 ms. The uniform distribution of projections was used to optimize the contribution of projections for 3D image reconstruction. RESULTS Using this fast-scan EPR system, high-quality EPR images of phantoms and perfused rat hearts were performed using trityl or nanoparticulate LiNcBuO (lithium octa-n-butoxy-substituted naphthalocyanine) probes with fast-scan EPR imaging at L-band, achieving spatial resolutions of up to 250 micrometers in 1 minute. CONCLUSION Fast-scan EPR imaging can greatly facilitate the efficient and precise mapping of the spatial distribution of free radical and other paramagnetic probes in living systems.
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Affiliation(s)
- Alexandre Samouilov
- Davis Heart and Lung Research Institute and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, Ohio
| | - Rizwan Ahmad
- Davis Heart and Lung Research Institute and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, Ohio
| | - James Boslett
- Davis Heart and Lung Research Institute and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, Ohio
| | - Xiaoping Liu
- Davis Heart and Lung Research Institute and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, Ohio
| | - Sergey Petryakov
- Geisel School of Medicine, Dartmouth College, Hanover, New Hampshire
| | - Jay L Zweier
- Davis Heart and Lung Research Institute and the Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University College of Medicine, Columbus, Ohio
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23
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Buchanan LA, Woodcock LB, Rinard GA, Quine RW, Shi Y, Eaton SS, Eaton GR. 250 MHz Rapid Scan Cross Loop Resonator. APPLIED MAGNETIC RESONANCE 2019; 50:333-345. [PMID: 30799909 PMCID: PMC6380496 DOI: 10.1007/s00723-018-1078-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
A 25 mm diameter 250 MHz crossed-loop resonator was designed for rapid scan electron paramagnetic resonance imaging. It has a saddle coil for the driven resonator and a fine wire, loop gap resonator for the sample resonator. There is good separation of E and B fields and high isolation between the two resonators, permitting a wide range of sample types to be measured. Applications to imaging of nitroxide, trityl, and LiPc samples illustrate the utility of the resonator. Using this resonator and a trityl sample the signal-to-noise of a rapid scan absorption spectrum is about 20 times higher than for a first-derivative CW spectrum.
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Affiliation(s)
- Laura A. Buchanan
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80210
| | - Lukas B. Woodcock
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80210
| | - George A. Rinard
- School of Engineering and Computer Science, University of Denver, Denver, CO 80210
| | - Richard W. Quine
- School of Engineering and Computer Science, University of Denver, Denver, CO 80210
| | - Yilin Shi
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80210
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80210
| | - Gareth R. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80210
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24
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Molecular Probes for Evaluation of Oxidative Stress by In Vivo EPR Spectroscopy and Imaging: State-of-the-Art and Limitations. MAGNETOCHEMISTRY 2019. [DOI: 10.3390/magnetochemistry5010013] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Oxidative stress, defined as a misbalance between the production of reactive oxygen species and the antioxidant defenses of the cell, appears as a critical factor either in the onset or in the etiology of many pathological conditions. Several methods of detection exist. However, they usually rely on ex vivo evaluation or reports on the status of living tissues only up to a few millimeters in depth, while a whole-body, real-time, non-invasive monitoring technique is required for early diagnosis or as an aid to therapy (to monitor the action of a drug). Methods based on electron paramagnetic resonance (EPR), in association with molecular probes based on aminoxyl radicals (nitroxides) or hydroxylamines especially, have emerged as very promising to meet these standards. The principles involve monitoring the rate of decrease or increase of the EPR signal in vivo after injection of the nitroxide or the hydroxylamine probe, respectively, in a pathological versus a control situation. There have been many successful applications in various rodent models. However, current limitations lie in both the field of the technical development of the spectrometers and the molecular probes. The scope of this review will mainly focus on the latter.
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25
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Laguta O, Tuček M, van Slageren J, Neugebauer P. Multi-frequency rapid-scan HFEPR. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 296:138-142. [PMID: 30261338 DOI: 10.1016/j.jmr.2018.09.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Revised: 09/11/2018] [Accepted: 09/12/2018] [Indexed: 06/08/2023]
Abstract
Gaining access to electron spin dynamics at (sub-)THz frequencies is highly challenging. However, this information is highly relevant for the understanding and development of spin polarization agents in dynamic nuclear polarization methods and single-molecule magnets for quantum computation. Here we demonstrate the first rapid-scan EPR experiment in 200 GHz frequency region. A voltage controlled oscillator (VCO) generated fast sinusoidal frequency sweeps with scan rates up to 3×105 THz/s after the frequency multiplication, which is equal to 107 T/s in field representation. Such high scan rates provide access to extremely short relaxation times T2=2π×sweeprate-0.5≈1 ns. The absence of a microwave cavity allowed us to perform multi-frequency experiments in the 170-250 GHz range. A further advantage of a cavity-less approach is the possibility to use vast sweeps, which in turn, allows the deconvolution using a linear sweep function. The deconvoluted spectra obtained with this method are identical to the slow-rate spectrum. We find spin-spin relaxation times of several nanoseconds for pure LiPc samples in this frequency range. These values cannot be obtained by means of conventional pulsed EPR methods.
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Affiliation(s)
- O Laguta
- Institute for Physical Chemistry and Center for Integrated Quantum Science and Technology, Universität Stuttgart, Pfaffenwaldring 55, Stuttgart D-70569, Germany
| | - M Tuček
- Central European Institute of Technology, Brno University of Technology, Purkyňova 656/123, Brno 61200, Czech Republic
| | - J van Slageren
- Institute for Physical Chemistry and Center for Integrated Quantum Science and Technology, Universität Stuttgart, Pfaffenwaldring 55, Stuttgart D-70569, Germany
| | - P Neugebauer
- Central European Institute of Technology, Brno University of Technology, Purkyňova 656/123, Brno 61200, Czech Republic.
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26
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Buchanan LA, Rinard GA, Quine RW, Eaton SS, Eaton GR. Tabletop 700 MHz electron paramagnetic resonance imaging spectrometer. CONCEPTS IN MAGNETIC RESONANCE. PART B, MAGNETIC RESONANCE ENGINEERING 2018; 48B:e21384. [PMID: 30804714 PMCID: PMC6386469 DOI: 10.1002/cmr.b.21384] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Accepted: 08/11/2018] [Indexed: 06/05/2023]
Abstract
Low frequency electron paramagnetic resonance imaging is a powerful tool to non-invasively measure the physiological status of tumors. Here, we report on the design and functionality of a rapid scan and pulse table-top imaging spectrometer based around an arbitrary waveform generator and 25mm cross-loop resonator operating at 700 MHz. Two and four-dimensional rapid scan spectral-spatial images are presented. This table-top imager is a prototype for future pre-clinical imagers.
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Affiliation(s)
- Laura A. Buchanan
- Department of Chemistry and Biochemistry and Center for EPR Imaging of In Vivo Physiology, University of
Denver, Denver, CO 80210
| | - George A. Rinard
- School of Engineering and Computer Science and Center for EPR Imaging of In Vivo Physiology, University of
Denver, Denver, CO 80210
| | - Richard W. Quine
- School of Engineering and Computer Science and Center for EPR Imaging of In Vivo Physiology, University of
Denver, Denver, CO 80210
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry and Center for EPR Imaging of In Vivo Physiology, University of
Denver, Denver, CO 80210
| | - Gareth R. Eaton
- Department of Chemistry and Biochemistry and Center for EPR Imaging of In Vivo Physiology, University of
Denver, Denver, CO 80210
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