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Singla D, Sharma P, Luxami V, Paul K. In Vitro Cytotoxicity and Mechanistic Investigation of Quinazolin-4(1H)-One Linked Coumarin as a Potent Anticancer Agent. Chem Biol Drug Des 2024; 104:e70011. [PMID: 39496463 DOI: 10.1111/cbdd.70011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2024] [Revised: 09/29/2024] [Accepted: 10/09/2024] [Indexed: 11/06/2024]
Abstract
Quinazolinone-coumarin conjugates synthesized through Late-Stage Functionalization approach are evaluated for their in vitro biological activity for 60 human cancer cell lines representing nine different cancer types. Among the synthesized compounds, eight displayed significant growth inhibitory activity across a spectrum of cancer types, with compound 23 demonstrating particularly notable cytotoxicity. Further investigation involved a five-dose assay of compound 23 against NCI-60 cancer cell lines, revealing its efficacy at different concentrations. Additionally, binding studies elucidated its interaction with Human Serum Albumin (HSA) and DNA. The results indicated a strong binding affinity of 23 with HSA, evidenced by a high binding constant (2.26 × 105 M-1). Moreover, its interaction with DNA occurred via intercalation, specifically between the base pairs of DNA strands, with a binding constant of 5.51 × 104 M-1. This suggests that compound 23 has the ability to bind to both DNA and transport proteins, making it a promising pharmacophore with potential therapeutic applications.
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Affiliation(s)
- Dinesh Singla
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala, India
| | - Palak Sharma
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala, India
| | - Vijay Luxami
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala, India
| | - Kamaldeep Paul
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala, India
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Vakili M, Romano E, Darugar V, Brandán SA. Behaviours of antiviral Oseltamivir in different media: DFT and SQMFF calculations. J Mol Model 2021; 27:357. [PMID: 34812947 PMCID: PMC8608578 DOI: 10.1007/s00894-021-04962-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Accepted: 10/20/2021] [Indexed: 01/18/2023]
Abstract
The synthetic cyclohexenecarboxylate ester antiviral Oseltamivir (O) have been theoretically studied by B3LYP/6–311 + + G** calculations to estimate its reactivity and behaviour in gas and aqueous media. The most stable structure obtained in above media is consistent with that reported experimental for Oseltamivir phosphate. The solvation energy value of (O) in aqueous media is between the predicted for antiviral Idoxuridine and Ribavirin. Besides, (O) containing a NH2 group and NH group reveals lower solvation energy compared with other antiviral agents with an NH2 group, such as Ribavirin, Cidofovir, and Brincidofovir. Atomic charges on N and O atoms in acceptors and donor groups reveal different behaviours in both media, while the natural bond orbital (NBO) studies show a raised stability of (O) in aqueous solution. This latter resulted is in concordance with the lower reactivity evidenced in water. Frontier orbital studies have revealed that (O) in gas phase has a very similar gap value to antiviral Cidofovir used against the ebola disease, while Chloroquine in the two media are more reactive than (O). This study will allow to identify (O) by using vibrational spectroscopy because the 144 vibration modes expected have been assigned using the harmonic force fields calculated from the scaled mechanical force field methodology (SQMFF). Scaled force constants for (O) in the mentioned media are also reported for first time. Due to hydration of the C = O and NH2 groups by solvent molecules, the calculations in solution produce variations not only in the IR wavenumbers bands, but also in their intensities.
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Affiliation(s)
- Mohammad Vakili
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Elida Romano
- Cátedra de Química General, Instituto de Química Inorgánica, Facultad de Bioquímica. Química Y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, (4000) San Miguel de Tucuman, Tucumán, Argentina
| | - Vahidreza Darugar
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Silvia Antonia Brandán
- Cátedra de Química General, Instituto de Química Inorgánica, Facultad de Bioquímica. Química Y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, (4000) San Miguel de Tucuman, Tucumán, Argentina.
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Singh N, Kumar N, Rathee G, Sood D, Singh A, Tomar V, Dass SK, Chandra R. Privileged Scaffold Chalcone: Synthesis, Characterization and Its Mechanistic Interaction Studies with BSA Employing Spectroscopic and Chemoinformatics Approaches. ACS OMEGA 2020; 5:2267-2279. [PMID: 32064388 PMCID: PMC7016911 DOI: 10.1021/acsomega.9b03479] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Accepted: 01/15/2020] [Indexed: 05/28/2023]
Abstract
Chalcone, a privileged structure, is considered as an effective template in the field of medicinal chemistry for potent drug discovery. In the present study, a privileged template chalcone was designed, synthesized, and characterized by various spectroscopic techniques (NMR, high-resolution mass spectrometry, Fourier transform infrared (FT-IR) spectroscopy, UV spectroscopy, and single-crystal X-ray diffraction). The mechanism of binding of chalcone with bovine serum albumin (BSA) was determined by multispectroscopic techniques and computational methods. Steady-state fluorescence spectroscopy suggests that the intrinsic fluorescence of BSA was quenched upon the addition of chalcone by the combined dynamic and static quenching mechanism. Time-resolved spectroscopy confirms complex formation. FT-IR and circular dichroism spectroscopy suggested the presence of chalcone in the BSA molecule microenvironment and also the possibility of rearrangement of the native structure of BSA. Moreover, molecular docking studies confirm the moderate binding of chalcone with BSA and the molecular dynamics simulation analysis shows the stability of the BSA-drug complex system with minimal deformability fluctuations and potential interaction by the covariance matrix. Moreover, pharmacodynamics and pharmacological analysis show good results through Lipinski rules, with no toxicity profile and high gastrointestinal absorptions by boiled egg permeation assays. This study elucidates the mechanistic profile of the privileged chalcone scaffold to be used in therapeutic applications.
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Affiliation(s)
- Nidhi Singh
- Department
of Chemistry, University of Delhi, Delhi 110007, India
| | - Neeraj Kumar
- Department
of Chemistry, University of Delhi, Delhi 110007, India
| | - Garima Rathee
- Department
of Chemistry, University of Delhi, Delhi 110007, India
| | - Damini Sood
- Department
of Chemistry, University of Delhi, Delhi 110007, India
| | - Aarushi Singh
- Department
of Chemistry, University of Delhi, Delhi 110007, India
| | - Vartika Tomar
- Department
of Chemistry, University of Delhi, Delhi 110007, India
| | - Sujata K. Dass
- BLK
Super Speciality Hospital, Pusa Road, Delhi, New Delhi 110005, India
| | - Ramesh Chandra
- Department
of Chemistry, University of Delhi, Delhi 110007, India
- Dr.
B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India
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Probing the interaction between 7-O-β-d-glucopyranosyl-6-(3-methylbut-2-enyl)-5,4′-dihydroxyflavonol with bovine serum albumin (BSA). J Photochem Photobiol A Chem 2017. [DOI: 10.1016/j.jphotochem.2016.12.015] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Luo Q, Wang Y, Yang H, Liu C, Ding Y, Xu H, Wang Q, Liu Y, Xie Y. Modeling the Interaction of Interferon α-1b to Bovine Serum Albumin as a Drug Delivery System. J Phys Chem B 2014; 118:8566-74. [DOI: 10.1021/jp5041713] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Qi Luo
- Soft
Matter Research Center and Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310027, P.R. China
| | - Yihui Wang
- State
Key Laboratory of Natural and Biomimetic Drugs, Department of Pharmaceutics,
School of Pharmaceutical Sciences, Peking University, Beijing 100191, P.R. China
| | - Hongge Yang
- State
Key Laboratory of Natural and Biomimetic Drugs, Department of Pharmaceutics,
School of Pharmaceutical Sciences, Peking University, Beijing 100191, P.R. China
| | - Chang Liu
- State
Key Laboratory of Natural and Biomimetic Drugs, Department of Pharmaceutics,
School of Pharmaceutical Sciences, Peking University, Beijing 100191, P.R. China
| | - Yuan Ding
- State
Key Laboratory of Natural and Biomimetic Drugs, Department of Pharmaceutics,
School of Pharmaceutical Sciences, Peking University, Beijing 100191, P.R. China
| | - Haifeng Xu
- State
Key Laboratory of Natural and Biomimetic Drugs, Department of Pharmaceutics,
School of Pharmaceutical Sciences, Peking University, Beijing 100191, P.R. China
| | - Qi Wang
- Soft
Matter Research Center and Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310027, P.R. China
| | - Yingchun Liu
- Soft
Matter Research Center and Department of Chemistry, Zhejiang University, Hangzhou, Zhejiang 310027, P.R. China
| | - Ying Xie
- State
Key Laboratory of Natural and Biomimetic Drugs, Department of Pharmaceutics,
School of Pharmaceutical Sciences, Peking University, Beijing 100191, P.R. China
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