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Li C, Lv C, Larbi A, Liang J, Yang Q, Wu G, Quan G. Revisiting the Injury Mechanism of Goat Sperm Caused by the Cryopreservation Process from a Perspective of Sperm Metabolite Profiles. Int J Mol Sci 2024; 25:9112. [PMID: 39201798 PMCID: PMC11354876 DOI: 10.3390/ijms25169112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 08/16/2024] [Accepted: 08/19/2024] [Indexed: 09/03/2024] Open
Abstract
Semen cryopreservation results in the differential remodeling of the molecules presented in sperm, and these alterations related to reductions in sperm quality and its physiological function have not been fully understood. Given this, this study aimed to investigate the cryoinjury mechanism of goat sperm by analyzing changes of the metabolic characteristics in sperm during the cryopreservation process. The ultra-high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UHPLC-QTOF-MS) technique was performed to explore metabolite profiles of fresh sperm (C group), equilibrated sperm (E group), and frozen-thawed sperm (F group). In total, 2570 metabolites in positive mode and 2306 metabolites in negative mode were identified, respectively. After comparative analyses among these three groups, 374 differentially abundant metabolites (DAMs) in C vs. E, 291 DAMs in C vs. F, and 189 DAMs in E vs. F were obtained in the positive mode; concurrently, 530 DAMs in C vs. E, 405 DAMs in C vs. F, and 193 DAMs in E vs. F were obtained in the negative mode, respectively. The DAMs were significantly enriched in various metabolic pathways, including 31 pathways in C vs. E, 25 pathways in C vs. F, and 28 pathways in E vs. F, respectively. Among them, 65 DAMs and 25 significantly enriched pathways across the three comparisons were discovered, which may be tightly associated with sperm characteristics and function. Particularly, the functional terms such as TCA cycle, biosynthesis of unsaturated fatty acids, sphingolipid metabolism, glycine, serine and threonine metabolism, alpha-linolenic acid metabolism, and pyruvate metabolism, as well as associated pivotal metabolites like ceramide, betaine, choline, fumaric acid, L-malic acid and L-lactic acid, were focused on. In conclusion, our research characterizes the composition of metabolites in goat sperm and their alterations induced by the cryopreservation process, offering a critical foundation for further exploring the molecular mechanisms of metabolism influencing the quality and freezing tolerance of goat sperm. Additionally, the impacts of equilibration at low temperature on sperm quality may need more attentions as compared to the freezing and thawing process.
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Affiliation(s)
- Chunyan Li
- Yunnan Animal Science and Veterinary Institute, Jindian, Panlong District, Kunming 650224, China; (C.L.); (C.L.); (J.L.); (G.W.)
- Yunnan Provincial Engineering Research Center of Livestock Genetic Resource Conservation and Germplasm Enhancement, Jindian, Panlong District, Kunming 650224, China
- National Regional Genebank (Yunnan) of Livestock and Poultry Genetic Resources, Jindian, Panlong District, Kunming 650224, China
| | - Chunrong Lv
- Yunnan Animal Science and Veterinary Institute, Jindian, Panlong District, Kunming 650224, China; (C.L.); (C.L.); (J.L.); (G.W.)
- Yunnan Provincial Engineering Research Center of Livestock Genetic Resource Conservation and Germplasm Enhancement, Jindian, Panlong District, Kunming 650224, China
- National Regional Genebank (Yunnan) of Livestock and Poultry Genetic Resources, Jindian, Panlong District, Kunming 650224, China
| | - Allai Larbi
- Laboratory of Sustainable Agriculture Management, Higher School of Technology Sidi Bennour, Chouaib Doukkali University El Jadida, El Jadida 24000, Morocco;
| | - Jiachong Liang
- Yunnan Animal Science and Veterinary Institute, Jindian, Panlong District, Kunming 650224, China; (C.L.); (C.L.); (J.L.); (G.W.)
- Yunnan Provincial Engineering Research Center of Livestock Genetic Resource Conservation and Germplasm Enhancement, Jindian, Panlong District, Kunming 650224, China
- National Regional Genebank (Yunnan) of Livestock and Poultry Genetic Resources, Jindian, Panlong District, Kunming 650224, China
| | - Qige Yang
- College of Veterinary Medicine, Yunnan Agricultural University, Fengyuan Road, Panlong District, Kunming 650500, China;
| | - Guoquan Wu
- Yunnan Animal Science and Veterinary Institute, Jindian, Panlong District, Kunming 650224, China; (C.L.); (C.L.); (J.L.); (G.W.)
- Yunnan Provincial Engineering Research Center of Livestock Genetic Resource Conservation and Germplasm Enhancement, Jindian, Panlong District, Kunming 650224, China
- National Regional Genebank (Yunnan) of Livestock and Poultry Genetic Resources, Jindian, Panlong District, Kunming 650224, China
| | - Guobo Quan
- Yunnan Animal Science and Veterinary Institute, Jindian, Panlong District, Kunming 650224, China; (C.L.); (C.L.); (J.L.); (G.W.)
- Yunnan Provincial Engineering Research Center of Livestock Genetic Resource Conservation and Germplasm Enhancement, Jindian, Panlong District, Kunming 650224, China
- National Regional Genebank (Yunnan) of Livestock and Poultry Genetic Resources, Jindian, Panlong District, Kunming 650224, China
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Yap YT, Li W, Huang Q, Zhou Q, Zhang D, Sheng Y, Mladenovic-Lucas L, Yee SP, Orwig KE, Granneman JG, Williams DC, Hess RA, Toure A, Zhang Z. DNALI1 interacts with the MEIG1/PACRG complex within the manchette and is required for proper sperm flagellum assembly in mice. eLife 2023; 12:e79620. [PMID: 37083624 PMCID: PMC10185345 DOI: 10.7554/elife.79620] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Accepted: 03/12/2023] [Indexed: 04/22/2023] Open
Abstract
The manchette is a transient and unique structure present in elongating spermatids and required for proper differentiation of the germ cells during spermatogenesis. Previous work indicated that the MEIG1/PACRG complex locates in the manchette and is involved in the transport of cargos, such as SPAG16L, to build the sperm flagellum. Here, using co-immunoprecipitation and pull-down approaches in various cell systems, we established that DNALI1, an axonemal component originally cloned from Chlamydomonas reinhardtii, recruits and stabilizes PACRG and we confirm in vivo, the co-localization of DNALI1 and PACRG in the manchette by immunofluorescence of elongating murine spermatids. We next generated mice with a specific deficiency of DNALI1 in male germ cells, and observed a dramatic reduction of the sperm cells, which results in male infertility. In addition, we observed that the majority of the sperm cells exhibited abnormal morphology including misshapen heads, bent tails, enlarged midpiece, discontinuous accessory structure, emphasizing the importance of DNALI1 in sperm differentiation. Examination of testis histology confirmed impaired spermiogenesis in the mutant mice. Importantly, while testicular levels of MEIG1, PACRG, and SPAG16L proteins were unchanged in the Dnali1 mutant mice, their localization within the manchette was greatly affected, indicating that DNALI1 is required for the formation of the MEIG1/PACRG complex within the manchette. Interestingly, in contrast to MEIG1 and PACRG-deficient mice, the DNALI1-deficient mice also showed impaired sperm spermiation/individualization, suggesting additional functions beyond its involvement in the manchette structure. Overall, our work identifies DNALI1 as a protein required for sperm development.
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Affiliation(s)
- Yi Tian Yap
- Department of Physiology, Wayne State University School of MedicineDetroitUnited States
| | - Wei Li
- Department of Physiology, Wayne State University School of MedicineDetroitUnited States
| | - Qian Huang
- Department of Physiology, Wayne State University School of MedicineDetroitUnited States
- Department of Occupational and Environmental Medicine, School of Public Health, Wuhan University of Science and TechnologyWuhanChina
| | - Qi Zhou
- Department of Physiology, Wayne State University School of MedicineDetroitUnited States
- Department of Occupational and Environmental Medicine, School of Public Health, Wuhan University of Science and TechnologyWuhanChina
| | - David Zhang
- College of William and MaryWilliamsburgUnited States
| | - Yi Sheng
- Molecular Genetics and Developmental Biology Graduate Program, Department of Obstetrics, Gynecology and Reproductive Sciences, Magee-Womens Research Institute, University of Pittsburgh School of MedicinePittsburghUnited States
| | - Ljljiana Mladenovic-Lucas
- Center for Molecular Medicine and Genetics, Wayne State University School of MedicineDetroitUnited States
| | - Siu-Pok Yee
- Department of Cell Biology, University of Connecticut Health CenterFarmingtonUnited States
| | - Kyle E Orwig
- Molecular Genetics and Developmental Biology Graduate Program, Department of Obstetrics, Gynecology and Reproductive Sciences, Magee-Womens Research Institute, University of Pittsburgh School of MedicinePittsburghUnited States
| | - James G Granneman
- Center for Molecular Medicine and Genetics, Wayne State University School of MedicineDetroitUnited States
| | - David C Williams
- Department of Pathology and Laboratory Medicine, University of North CarolinaChapel HillUnited States
| | - Rex A Hess
- Department of Comparative Biosciences, College of Veterinary Medicine, University of IllinoisUrbanaUnited States
| | - Aminata Toure
- University Grenoble Alpes, Inserm U 1209, CNRS UMR 5309, Team Physiology and Pathophysiology of Sperm cells, Institute for Advanced BiosciencesGrenobleFrance
| | - Zhibing Zhang
- Department of Physiology, Wayne State University School of MedicineDetroitUnited States
- Department of Obstetrics & Gynecology, Wayne State UniversityDetroitUnited States
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Jia Y, Zheng J, Liu S, Li F, Chi M, Cheng S, Gu Z. A Chromosome-Level Genome Assembly of the Dark Sleeper Odontobutis potamophila. Genome Biol Evol 2021; 13:6134080. [PMID: 33576781 PMCID: PMC7883661 DOI: 10.1093/gbe/evaa271] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/22/2020] [Indexed: 01/20/2023] Open
Abstract
The dark sleeper, Odontobutis potamophila, is a commercially valuable fish that widely distributed in China and Southeast Asia countries. The phenomenon of sexual dimorphism in growth is conspicuous, which the males grow substantially larger and faster than the females. However, the high-quality genome resources for gaining insight into sex-determining mechanisms to develop sex-control breeding are still lacking. Here, a chromosomal-level genome assembly of O. potamophila was generated from a combination of Illumina reads, 10× Genomics sequencing, and Hi-C chromatin interaction sequencing. The assembled genome was 1,134.62 Mb with a contig N50 of 22.25 Mb and a scaffold N50 of 24.85 Mb, representing 94.4% completeness (Benchmarking Universal Single-Copy Orthologs). Using Hi-C data, 96.49% of the total contig bases were anchored to the 22 chromosomes, with a contig N50 of 22.25 Mb and a scaffold N50 of 47.68 Mb. Approximately 54.18% of the genome were identified as repetitive elements, and 23,923 protein-coding genes were annotated in the genome. The assembled genome can be used as a valuable resource for molecular breeding and functional studies of O. potamophila in the future.
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Affiliation(s)
- Yongyi Jia
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
| | - Jianbo Zheng
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
| | - Shili Liu
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
| | - Fei Li
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
| | - Meili Chi
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
| | - Shun Cheng
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
| | - Zhimi Gu
- Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China
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Wang T, Wei X, Sun Y, Hu Y, Li J, Zhang X, Yin S, Shi Y, Zhu Y. Copper nanoparticles induce the formation of fatty liver in Takifugu fasciatus triggered by the PERK-EIF2α- SREBP-1c pathway. NANOIMPACT 2021; 21:100280. [PMID: 35559772 DOI: 10.1016/j.impact.2020.100280] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Revised: 11/09/2020] [Accepted: 11/22/2020] [Indexed: 06/15/2023]
Abstract
Copper nanoparticles (CuNPs), a new pollutant in water environments, were widely used in various industrial and commercial applications. This study indicated that the presence of CuNPs exposure under environmental related concentration is an inducing factor that contributes to the fatty liver formation in Takifugu fasciatus. Furthermore, we explored the fatty liver formation mechanism. The results shown, (1) the cloned genes related to endoplasmic reticulum stress (ERS) (GRP78, IRE-1α, PERK, and ATF-6α) were highly expressed in the liver of T. fasciatus. (2) after 30-days exposure, CuNPs accumulated in the endoplasmic reticulum of liver and induced the appearance of ERS, then activated unfolded protein response (UPR) signaling pathway. Furthermore, the SREBP-1c pathway that plays a key role in lipid synthesis was activated. (3) by using 4-PBA and GSK inhibitors to respectively stimulate ERS and PKR-like ER kinase (PERK) through in vitro experiments, we confirmed that CuNPs induced the fatty liver formation in T. fasciatus triggered by the PERK-EIF2α pathway by activating the SREBP-1c pathway to promote fatty liver formation. This study provides a new perspective for identifying the pathogens of fatty liver formation, and adds to the knowledge of the ecological safety data service of CuNPs in water.
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Affiliation(s)
- Tao Wang
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China
| | - Xiaozhen Wei
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China
| | - Yiru Sun
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China
| | - Yadong Hu
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China
| | - Jie Li
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China
| | - Xinyu Zhang
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China
| | - Shaowu Yin
- College of Marine Science and Engineering, Jiangsu Province Engineering Research Center for Aquatic Animals Breeding and Green Efficient Aquacultural Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, China; Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu 222005, China.
| | - Yonghai Shi
- Shanghai Fisheries Research Institute, Shanghai 200433, China
| | - Yongxiang Zhu
- Jiangsu Zhongyang Group Company Limited, Haian, Jiangsu 226600, China
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Qi Y, Zang R, Lu H, Wang Z, Ma Z. Network pharmacology and bioinformatics approach reveals the hypolipidemic mechanism of Dan Tian Jiang Zhi pill. Med Chem Res 2019. [DOI: 10.1007/s00044-019-02478-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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