The response of benthic foraminifera to heavy metals and grain sizes: A case study from Hainan Island, China

Patterns of ecological quality in Portuguese transitional waters over the last five decades: a framework based on benthic foraminifera for the Sado estuary

This study aimed to examine the validity of benthic foraminifera-based indices - Foraminiferal Stress Index (FSI), diversity index Exp(H'bc), and Ecological Quality Ratio (EQR) - for evaluating estuarine environmental conditions and supporting palaeoecological reconstructions, focusing on the Sado estuary (southwest Portugal). Located near heavily industrialized urban areas and designated as a Nature Reserve, this estuary faces human pressures and high natural values, leading to management conflicts. Foraminiferal assemblages were analysed in surface sediment samples, with known concentrations of several metal(loid)s, and in dated core samples. Correlations were found between metal(loid)s, organic matter, grain size, and salinity (as a proxy for tidal influence) controls on foraminiferal distribution. Despite such hydrodynamic controls, statistical analyses also confirmed that metal(loid) concentrations and enrichment factors (as proxies for ecological quality) influenced foraminiferal distribution. A significant direct correlation was observed between lower ecological quality status (EcoQS), as reflected by FSI and Exp(H'bc), and higher metal(loid) concentrations, particularly for Exp(H'bc) and Ni, Cr, Cu, Zn, Pb, and As, suggesting they can be used in preliminary surveys with varying accuracy. Reconstructions applying Exp(H'bc) and EQR aligned with Portuguese economic cycles, showing that Palaeo-EcoQS tended to be "Good"/"High" during downturns and "Poor"/"Moderate" in recovery and peak periods. While this analysis has limitations, the cost-effective use of foraminiferal data can offer reliable early-stage environmental quality assessments, with the added benefit of supporting historical reconstructions from sedimentary archives. Overall, this work contributes to the ongoing efforts to validate benthic foraminifera as a biological quality element in assessing EcoQS in marine and transitional habitats.

Assessment of responses of cultured benthic foraminiferal communities to copper pollution through environmental RNA metabarcoding analysis

Copper (Cu) is an essential trace element and can accumulate in sedimentary environments. However, beyond a certain concentration threshold, Cu can pose toxicity risks to biota. Benthic foraminifera are widely distributed and exhibit characteristics such as high biodiversity, short life cycle, good preservation potential, and high pollutant sensitivity, making them good bioindicators. In this study, we investigated the responses of benthic foraminiferal communities to various Cu concentrations through environmental RNA metabarcoding under controlled laboratory conditions. Some foraminiferal genera-Glandulina, Pyrgo, Quinqueloculina, Sorites, and Vellaria-exhibited sensitivity to high Cu concentrations. Other genera-Ammonia, Operculina, Reophax, Bolivina, Glabratella, Miliammina, and Parasorites-displayed tolerance to high Cu concentrations. Moreover, high Cu levels led to reduced living benthic foraminifera abundance and interspecific interactions, albeit without inducing test deformities. Our findings provide a novel and efficient approach for exploring the responses of benthic foraminiferal communities to heavy metal pollution.

Distribution, ecological risk, and sediment-influencing mechanisms of heavy metals in surface sediments along the intertidal gradient in typical mangroves in Hainan, China

The relative importance of each sediment physicochemical property to sediment heavy-metal (HM) contents has not yet been quantitatively evaluated. Differences in the HM contents of mangrove surface sediments among the high, middle, and low intertidal zones, and their quantitative relationships to sediment physicochemical properties, were investigated in Dongzhaigang and Qinglan Harbor reserves, Hainan, China. In both reserves, the Cu and Ni concentrations increased significantly from the low to high intertidal zones; the patterns of change in the Mn and Pb contents were opposite in the two reserves. The Cr concentration was significantly lower and the Pb concentration was significantly higher in the dry season than in the wet season. Ecological risks of HM were higher in Dongzhaigang than in Qinglan Harbor. Regression and redundancy (hierarchical partitioning) analyses showed that the sediment total sulfur, nitrogen and potassium contents and pH were key factors affecting the HM contents of mangrove surface sediments.

Benthic foraminiferal community structure and its response to environmental factors revealed using high-throughput sequencing in the Zhoushan Fishing Ground, East China Sea

Benthic foraminifera are excellent tools for monitoring marine environments and reconstructing paleoenvironments. This study investigated the structure and diversity of benthic foraminiferal communities in 20 superficial sediment samples obtained from the Zhoushan Fishing Ground (ZFG) using high-throughput sequencing based on small subunit ribosomal DNA and RNA amplification. The results revealed Rotaliida as the most dominant group, with spatial heterogeneity in foraminiferal distribution. Total benthic foraminiferal communities exhibited higher species richness and diversity compared to active communities. While heavy metal pollution in the ZFG was moderate, areas with elevated concentrations of heavy metals exhibited low diversity and richness in foraminiferal communities. Total foraminiferal community structure was primarily influenced by factors such as water depth and Hg, Pb, Cd, and Zn levels. Notably, Hg levels emerged as a critical factor impacting the structure and diversity of the active foraminiferal community. The dominant species, Operculina, exhibited tolerance toward heavy metal pollution.

Benthic foraminifera as bioindicators for the heavy metals in the severely polluted Hurghada Bay, Red Sea coast, Egypt

Twenty-nine sediment samples were collected from the Hurghada Bay, a heavily polluted bay on the Red Sea of Egypt, to inspect the environmental quality status and anthropogenic consequences on benthic foraminifera. Some foraminiferal species showed deformations in their apertures and coiling directions as a response to environmental stresses. In addition, the FoRAM index, an index used for evaluating the growth of coral reefs, indicated a hazard in the proximity of nearshore stations. To elucidate the relationships between the biological response and chemistry of sediments, eight heavy metals concentrations (Cu, Cd, Zn, Pb, As, Cr, Ni, and Mn) were analyzed using inductively coupled plasma-atomic emission spectrometers (ICP-AES). Interestingly, two groups of benthic foraminiferal associations were illustrated using multivariate statistical analyses. Group I have extremely high heavy metal concentrations, an enriched total organic matter (TOM)%, high deformation percentages, and mud content. Moreover, it is dominated by Ammonia tepida which is regarded as an opportunistic species. Group II includes low to moderately polluted stations, highly enriched living foraminiferal assemblages, and is dominated by the sensitive rotaliids Neorotalia calcar and Amphistegina lobifera. Alternatively, four geochemical indices, EF, CF, I_geo, and PLI, are used to assess the contamination level that shown ominous spots for the nearshore stations of the Hurghada Bay. The pollution indices (HQ and HI) were also conducted to evaluate the risks of carcinogenic heavy metals on human health. Our findings demonstrated that ingestion and dermal exposure have greater carcinogenic hazards for adults and children than inhalation. The lifetime carcinogenic risk (LCR) is significantly higher than the permissible limit and follows this order: Pb > As > Cr > Cd > Ni. To that end, developing strategies to lessen the negative impact of pollution on human health and/or the Red Sea's biodiversity is an inevitable issue in the present day and future.

Lead and cadmium exposure alters shell morphogenesis in a single-chambered, agglutinated foraminiferan protist

Changes to calcareous foraminiferal shell morphology are well documented in heavy metal-polluted marine environments, however less is known about how these toxicants affect agglutinated foraminifera, particularly single-chambered (monothalamid) species. Here we used an agglutinated monothalamic foraminifer, Astrammina rara, to study shell morphogenesis during exposure to lead (Pb) and cadmium (Cd). Isolated cell bodies incubated with artificial sediment and control, Pb-, or Cd-spiked artificial seawater constructed new agglutinated shells in four weeks. Time-lapse recordings showed normal motile behavior during treatments. SEM imaging of reconstructed shells, however, revealed dramatic deformations in the bioadhesive of Pb-exposed shells, and less so in Cd-exposed shells. ICP-MS analysis of the isolated shells showed elevated levels of Pb, but not Cd, in the bioadhesive of treated specimens, indicating that the two metals exert their effects differentially. These findings show that certain agglutinated foraminifera may be useful indicator species in studies of heavy metal-polluted benthic marine environments.

Ecological risk assessment and phytomanagement of trace metals in the sediments of mangroves associated with the Ramsar sites of Kerala, southern India

The study investigated trace metal accumulation in the sediments of three major mangrove ecosystems associated with the Ramsar sites of Kerala state, the ecological risks they pose, and the absorption, accumulation, and translocation of metals in five dominant mangrove species, as these systems are heavily impacted by anthropogenic interventions. The trace metal concentrations (mg kg^-1) in the sediment of different mangrove habitats of Kerala ranged from 20 to 295 for Cu, 65 to 350 for Zn, 72 to 151 for Pb, 11 to 210 for Ni, 42 to 228 for Mn, 0 to 6 for Cd,124 to 565 for Cr, and 0 to 2.9 for Ag. An overall enrichment of metals was recorded in sediment, exceeding the prescribed effects range median (ERM) of consensus-based sediment quality guidelines (SQGs) for Cu and Cr concentrations at Munroe Island and Ni at Vypin, indicating a detrimental risk to biota in the sediments. Principal component analysis and a higher geoaccumulation index indicated the contribution of trace metals from industries, agricultural runoff, and urban waste disposal. The ecological risk index suggested that cadmium poses a very high risk to the mangrove ecosystem at Vypin. Furthermore, the bioconcentration factor for various trace metals in Avicennia marina and Lumnitzera racemosa in Ayiramthengu was > 2, suggesting that these species can accumulate trace metals, particularly Cr, Cd, and Pb. Further, our findings suggest that A. marina may be considered as an efficient metal trap for Cd in aerial parts, as indicated by the significant translocation factor (> 1) combined with the bioconcentration factor. Therefore, the study revealed that Munroe island and Vypin had a considerable level of contamination for toxic metals and Avicennia marina could be a promising candidate species for the phytoremediation of these trace metals in the coastal settings of Kerala state.

Spatial distribution of pollution levels and assessment of benthic foraminifera in Apapa-Badagry Creek, Nigeria

The Apapa and Badagry creeks in Nigeria are a corridor of long-term anthropogenic activities, including mangrove removal, urban expansion, and industrialization. Consequently, this uncontrolled development led to the release of untreated effluents and wastes, which resulted in sediment and water quality degradation. This area has the highest degree of pollution (Enrichment and Contamination Factors) especially north of Tincan Island where potentially toxic element (PTE) depocenters occur. Our data shows that salinity and pH are the two main factors favoring foraminiferal distributions, but the sediments in the depocenters with the highest degree of PTE pollution are barren of foraminifera. Bioavailable sediment-bound PTEs have been found to negatively impact the assemblage distribution and diversity. It is important to highlight that dissolved phosphorous was the only PTE that negatively impacted species richness. This study highlights the significance of implementing PTE bioavailability as an integral part of ecosystem functioning in all nearshore environments.

Total and active benthic foraminiferal community and their response to heavy metals revealed by high throughput DNA and RNA sequencing in the Zhejiang coastal waters, East China Sea

Benthic foraminifera, large protists abundant in marine environments, have been widely used as bioindicators of environmental conditions. In this study, high-throughput sequencing based on small subunit rDNA and rRNA amplifications was used to investigate total and active benthic foraminifera community composition and diversity from nineteen and twelve superficial marine sediment samples in the Zhejiang coastal waters, respectively. The results showed that the dominant taxa of total foraminifera changed from Buliminellidae (hyaline) to Saccamminidae (agglutinated) from north to south along the coastal waters of Zhejiang Province. According to our survey, heavy metal contamination was moderate in Zhejiang coastal waters, and the potential ecological risks posed by Cd and Hg were higher. The contamination level of heavy metals at Yueqing Bay was the highest, followed by those at Sanmen Bay and Hangzhou Bay. Cd, Cu and grain size may be key factors affecting the distribution and composition of active foraminiferal communities.

Effects of land use on the heavy metal pollution in mangrove sediments: Study on a whole island scale in Hainan, China

In recent decades, mangrove ecosystems at coastal zone are experiencing rapid land-use conversion, however effects of land use on the heavy metal pollution in mangrove sediments still are not clear. This study investigated the concentration and distribution of heavy metals (including chromium (Cr), zinc (Zn), lead (Pb), copper (Cu), arsenic (As) and cadmium (Cd)) in different mangrove sediments with different land-use patterns along seashore of the whole Hainan island (with the third largest mangrove area of China). The effects of land use on the accumulation of heavy metals in these mangrove sediments are also analyzed. The results showed contaminations of ∑6Metals in this study following the order of arable lands (ARAB) > aquaculture ponds (AQUA) > riverine area (RIVER) > ecological area (ECOL) > construction area (CONS). Accumulation degree of As and Cd were high in the AQUA, ARAB, and RIVER area. As metal hotspots, ARAB, RIVER and AQUA area showed the deteriorated sediment quality with high pollution load index (>1). Redundancy discriminate analysis revealed that mangrove, paddy lands and aquaculture ponds related activities correlated well with the metal pollution. The results clearly revealed that different land uses would not only change the accumulation capacity of mangrove soil for heavy metals, but also contribute different sources of heavy metal pollution. These findings do help to facilitate land-use planning and contribute to guide a better mangrove wetland management at coastal zone.

Response of Living Benthic Foraminifera to Anthropogenic Pollution and Metal Concentrations in Saronikos Gulf (Greece, Eastern Mediterranean)

The Saronikos Gulf, including the industrial zone of Elefsis Bay, is subjected to a variety of urban and industrial impacts that significantly contribute to environmental degradation. Benthic foraminifera comprise a significant component of meiobenthic communities and they are widely used as reliable indicators for the determination of the natural environmental and anthropogenic impact in shallow coastal systems. The present study analyses the living benthic foraminifera composition and its relation to environmental parameters such as grain size, organic carbon content, and heavy metal concentrations, from the surficial sediment layer collected in the Elefsis Bay and the Inner Saronikos Gulf in February 2016. Canonical correspondence analysis and Spearman’s rho correlation show that the foraminiferal species composition is significantly influenced by the increase of organic carbon and Cu, Pb, Zn content. In particular, a relatively low diversity fauna dominated by the stress-tolerant species Ammonia tepida, Bulimina elongata, Bulimina marginata, and Nonionella turgida occurs in the restricted environment of the Elefsis Bay, demonstrating the negative environmental impact caused by the relatively elevated organic carbon and heavy metal contents.

The spatial distribution of benthic foraminifera in the Pearl River Estuary, South China and its environmental significance

Thirty surface sediment samples were collected from the Pearl River Estuary, South China, and benthic foraminifera were analyzed in order to understand the relationship between foraminiferal assemblages and environmental parameters. Multivariate analyses showed that the foraminferal assemblages (i.e., abundance and diversity) are correlated with the hydro-sedimentary gradients within the estuary. In addition, the dominant faunal composition seems to be largely influenced by food availability and trace metal contamination in surface sediments. A comparison with historical data from 1980s demonstrated that the foraminiferal abundance and diversity in the lower estuary have dramatically decreased over the last three decades, together with a significant shift in the dominant species. This is most likely due to the cumulative impacts of eutrophication and Cu contamination caused by human activities in the Pearl River basin. This work confirms the value of benthic foraminifera as bio-indicators in polluted estuarine environments.