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Feng X, Ji F, Xu W, Song C, Xu J, Jia P, Dong X, Xi W, Yan Z, Niu F. Characteristics and environmental driving mechanisms of bacterial communities in the Bohai Sea. MARINE ENVIRONMENTAL RESEARCH 2025; 205:106996. [PMID: 39929087 DOI: 10.1016/j.marenvres.2025.106996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2024] [Revised: 01/24/2025] [Accepted: 02/03/2025] [Indexed: 03/08/2025]
Abstract
The Bohai Sea, a semi-enclosed marginal sea, hosts a diverse array of bacterial communities that play pivotal roles in marine biogeochemical cycles. However, understanding of bacterial communities remains fragmented in the Bohai Sea, with unclear links between environmental factors and key species, and limited insights into the roles of environment and space in shaping the bacterial communities. In this study, we compiled a series of data, and investigated how spatial and environmental factors influence the region's distribution, assembly, and function of bacterial communities using high-throughput sequencing and statistical analyses. The results revealed that the bacterial communities in the Bohai Sea exhibited a high heterogeneity of spatial and environmental factors. Major drivers of community assembly included geographic location, nutrient availability (NO2-N, NO3-N, and NH4-N), temperature, and dissolved oxygen. Additionally, we found that the bacterial community structure in the nearshore waters of the Bohai Sea was distinctly different from that in the distant seas. Furthermore, we identified key bacterial species, including Marinimicrobia, Proteobacteria, Lentisphaerae, and Cyanobacteria that significantly contributed to community structure and function by random forest analysis. Notably, the abundance of Cyanobacteria was strongly correlated with environmental factors (NO2-N, NO3-N, and NH4-N), suggesting their potential as bioindicators of environmental change in marine ecosystems. More importantly, deterministic processes in the assembly of bacterial communities played a greater role than stochastic processes in highly polluted regions (BS3). The results of this research enhanced our understanding of the ecological processes governing bacterial community dynamics and provided valuable insights for monitoring and management marine ecosystem.
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Affiliation(s)
- Xu Feng
- Liaoning Key Laboratory of Chemical Additive Synthesis and Separation, Panjin Institute of Industrial Technology, Dalian University of Technology, Panjin, 124221, China; School of Petrochemical Engineering, Shenyang University of Technology, Liaoyang, 111003, China
| | - Fengyun Ji
- Liaoning Key Laboratory of Chemical Additive Synthesis and Separation, Panjin Institute of Industrial Technology, Dalian University of Technology, Panjin, 124221, China.
| | - Weiping Xu
- Liaoning Key Laboratory of Chemical Additive Synthesis and Separation, Panjin Institute of Industrial Technology, Dalian University of Technology, Panjin, 124221, China; School of Chemical Engineering, Ocean Technology and Life Science (CEOTLS), Dalian University of Technology, Panjin, 124221, China.
| | - Changmin Song
- Marine Ecology Laboratory, Dalian Boyuan Testing and Evaluation Center Co., Ltd., Dalian, 116699, China
| | - Jianqiang Xu
- Liaoning Key Laboratory of Chemical Additive Synthesis and Separation, Panjin Institute of Industrial Technology, Dalian University of Technology, Panjin, 124221, China; School of Chemical Engineering, Ocean Technology and Life Science (CEOTLS), Dalian University of Technology, Panjin, 124221, China
| | - Peng Jia
- School of Petrochemical Engineering, Shenyang University of Technology, Liaoyang, 111003, China
| | - Xiaoying Dong
- Liaoning Key Laboratory of Chemical Additive Synthesis and Separation, Panjin Institute of Industrial Technology, Dalian University of Technology, Panjin, 124221, China
| | - Wenqiu Xi
- Research & Development Center, Panjin Guanghe Crab Industry Co., Ltd., Panjin, 124200, China
| | - Zhigang Yan
- Liaoning Key Laboratory of Chemical Additive Synthesis and Separation, Panjin Institute of Industrial Technology, Dalian University of Technology, Panjin, 124221, China
| | - Fengjuan Niu
- College of Chemistry and Environmental Engineering, Yingkou Institute of Technology, Yingkou, 115014, China
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Malas J, Khoury SC, Tanzillo M, Fischer GA, Bogner JE, Meyer-Dombard DR. Impact of antibiotics, iron oxide, and sodium sulfate on microbial community composition in laboratory-built municipal solid waste microcosms. PLoS One 2025; 20:e0318351. [PMID: 39874355 PMCID: PMC11774356 DOI: 10.1371/journal.pone.0318351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2024] [Accepted: 01/15/2025] [Indexed: 01/30/2025] Open
Abstract
Municipal solid waste (MSW) landfills represent underexplored microbial ecosystems. Landfills contain variable amounts of antibiotic and construction and demolition (C&D) wastes, which have the potential to alter microbial metabolism due to biocidal or redox active components, and these effects are largely underexplored. To circumvent the challenge of MSW heterogeneity, we conducted a 65-day time series study on simulated MSW microcosms to assess microbiome changes using 16S rRNA sequencing in response to 1) Fe(OH)3 and 2) Na2SO4 to represent redox active components of C&D waste as well as 3) antibiotics. The addition of Fe(OH)3 altered the overall community composition and increased Shannon diversity and Chao1 richness. The addition of a mixture of seven antibiotics (1000 ng/L each) altered the community composition without affecting diversity metrics. Sulfate addition had little effect on microbial community composition or diversity. These results suggest that the microbial community composition in fresh MSW may be significantly impacted by influxes of iron waste and a single application of antibiotics.
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Affiliation(s)
- Judy Malas
- Department of Earth and Environmental Sciences, University of Illinois at Chicago, Chicago, IL, United States of America
| | - Sarah C. Khoury
- Department of Earth and Environmental Sciences, University of Illinois at Chicago, Chicago, IL, United States of America
| | - Michael Tanzillo
- Department of Earth and Environmental Sciences, University of Illinois at Chicago, Chicago, IL, United States of America
| | - Gracie A. Fischer
- Department of Earth and Environmental Sciences, University of Illinois at Chicago, Chicago, IL, United States of America
| | - Jean E. Bogner
- Department of Earth and Environmental Sciences, University of Illinois at Chicago, Chicago, IL, United States of America
| | - D’Arcy R. Meyer-Dombard
- Department of Earth and Environmental Sciences, University of Illinois at Chicago, Chicago, IL, United States of America
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Zhang X, Fang K, Zhang C, Jiang X, Gong M, Han L, Wang X. Earthworms-enhanced bacterial degradation of the chiral fungicide penflufen R-enantiomer. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 954:176395. [PMID: 39304137 DOI: 10.1016/j.scitotenv.2024.176395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Revised: 09/05/2024] [Accepted: 09/17/2024] [Indexed: 09/22/2024]
Abstract
The widespread application of chiral fungicides as seed-coating agents in agriculture has led to serious residue accumulation in soil, increasingly drawing attention to soil pollution remediation strategies for chiral pesticides. This study explored the role of earthworms and soil microorganisms in selectively accelerating the degradation of penflufen in soil. The results showed that soil microorganisms significantly accelerated penflufen enantiomer degradation, particularly the R-enantiomer. Nocardioides, Variovorax, Arthrobacter, and Pseudomonas were identified as key degrading microorganisms associated with the preferential degradation of the R-enantiomer. The addition of earthworms further significantly enhanced the preferential degradation of the R-enantiomer. Importantly, earthworms markedly promoted the growth and reproduction of the four aforementioned degrading microorganisms in soil treated with enantiomers. Notably, the relative abundance of these degrading microorganisms was significantly higher in R-enantiomer-treated soil with earthworms than in soil treated with the S-enantiomer. Additionally, earthworms significantly increased the relative abundance of degradation genes p450, bphA1, and benA in the soil, especially in the R-enantiomer treated soil. Nocardioides, Variovorax, Arthrobacter, and Pseudomonas were identified as potential hosts for the degradation gene benA. More importantly, twelve strains of penflufen-degrading bacteria were isolated from the treated soil, of which eight belonged to the aforementioned four microorganisms and exhibited a remarkable ability to preferentially degrade the R-enantiomer. This finding highlights the potential of adding earthworms to soil, in conjunction with key degrading microorganisms, which preferentially accelerates penflufen R-enantiomer degradation.
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Affiliation(s)
- Xin Zhang
- Plant Protection Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China
| | - Kuan Fang
- Shanghai Jiao Tong University School of Agriculture and Biology, Shanghai 201109, China
| | - Chengzhi Zhang
- Plant Protection Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China
| | - Xiaoke Jiang
- Plant Protection Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China
| | - Mingxiang Gong
- Plant Protection Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China
| | - Lingxi Han
- College of Horticulture, Qingdao Agricultural University, Qingdao 266109, China.
| | - Xiuguo Wang
- Plant Protection Research Center, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China.
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Faulstich L, Wollenweber S, Reinhardt-Imjela C, Arendt R, Schulte A, Hollert H, Schiwy S. Ecotoxicological evaluation of surface waters in Northern Namibia. ENVIRONMENTAL MONITORING AND ASSESSMENT 2024; 196:456. [PMID: 38630192 PMCID: PMC11024038 DOI: 10.1007/s10661-024-12613-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Accepted: 04/04/2024] [Indexed: 04/19/2024]
Abstract
The increasing pressure on freshwater systems due to intensive anthropogenic use is a big challenge in central-northern Namibia and its catchment areas, the Kunene and the Kavango Rivers, and the Cuvelai-Etosha Basin, that provide water for more than 1 million people. So far, there is no comprehensive knowledge about the ecological status and only few knowledge about the water quality. Therefore, it is crucial to learn about the state of the ecosystem and the ecological effects of pollutants to ensure the safe use of these resources. The surface waters of the three systems were sampled, and three bioassays were applied on three trophic levels: algae, daphnia, and zebrafish embryos. Additionally, in vitro assays were performed to analyze mutagenicity (Ames fluctuation), dioxin-like potential (micro-EROD), and estrogenicity (YES) by mechanism-specific effects. The results show that acute toxicity to fish embryos and daphnia has mainly been detected at all sites in the three catchment areas. The systems differ significantly from each other, with the sites in the Iishana system showing the highest acute toxicity. At the cellular level, only weak effects were identified, although these were stronger in the Iishana system than in the two perennial systems. Algae growth was not inhibited, and no cytotoxic effects could be detected in any of the samples. Mutagenic effects and an estrogenic potential were detected at three sites in the Iishana system. These findings are critical in water resource management as the effects can adversely impact the health of aquatic ecosystems and the organisms within them.
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Affiliation(s)
- L Faulstich
- Freie Universität Berlin, Berlin, Germany.
- Goethe-Universität Frankfurt, Frankfurt, Germany.
| | | | | | - R Arendt
- Freie Universität Berlin, Berlin, Germany
| | - A Schulte
- Freie Universität Berlin, Berlin, Germany
| | - H Hollert
- Goethe-Universität Frankfurt, Frankfurt, Germany
| | - S Schiwy
- Goethe-Universität Frankfurt, Frankfurt, Germany
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Wu Y, Liu Y, Kamyab H, Manivasagan R, Rajamohan N, Ngo GH, Xia C. Physico-chemical and biological remediation techniques for the elimination of endocrine-disrupting hazardous chemicals. ENVIRONMENTAL RESEARCH 2023:116363. [PMID: 37295587 DOI: 10.1016/j.envres.2023.116363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2023] [Revised: 05/27/2023] [Accepted: 06/07/2023] [Indexed: 06/12/2023]
Abstract
Due to their widespread occurrence and detrimental effects on human health and the environment, endocrine-disrupting hazardous chemicals (EDHCs) have become a significant concern. Therefore, numerous physicochemical and biological remediation techniques have been developed to eliminate EDHCs from various environmental matrices. This review paper aims to provide a comprehensive overview of the state-of-the-art remediation techniques for eliminating EDHCs. The physicochemical methods include adsorption, membrane filtration, photocatalysis, and advanced oxidation processes. The biological methods include biodegradation, phytoremediation, and microbial fuel cells. Each technique's effectiveness, advantages, limitations, and factors affecting their performance are discussed. The review also highlights recent developments and future perspectives in EDHCs remediation. This review provides valuable insights into selecting and optimizing remediation techniques for EDHCs in different environmental matrices.
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Affiliation(s)
- Yingji Wu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, International Innovation Center for Forest Chemicals and Materials, College of Materials Science and Engineering, Nanjing Forestry University, Nanjing, Jiangsu, 210037, China
| | - Yubo Liu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, International Innovation Center for Forest Chemicals and Materials, College of Materials Science and Engineering, Nanjing Forestry University, Nanjing, Jiangsu, 210037, China
| | - Hesam Kamyab
- Faculty of Architecture and Urbanism, UTE University, Calle Rumipamba S/N and Bourgeois, Quito, Ecuador; Department of Biomaterials, Saveetha Dental College and Hospital, Saveetha Institute of Medical and Technical Sciences, Chennai, 600 077, India; Malaysia-Japan International Institute of Technology Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia
| | - Rajasimman Manivasagan
- Department of Chemical Engineering, Annamalai University, Annamalai Nagar, 608002, India.
| | - Natarajan Rajamohan
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman
| | - Gia Huy Ngo
- Center for Advanced Chemistry, Institute of Research and Development, Duy Tan University, 03 Quang Trung, Da Nang, 550000, Viet Nam; Department of Pharmacy, Duy Tan University, 03 Quang Trung, Da Nang, 550000, Viet Nam
| | - Changlei Xia
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, International Innovation Center for Forest Chemicals and Materials, College of Materials Science and Engineering, Nanjing Forestry University, Nanjing, Jiangsu, 210037, China.
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