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Oluwatoba DS, Safoah HA, Do TD. The rise and fall of adenine clusters in the gas phase: a glimpse into crystal growth and nucleation. Anal Bioanal Chem 2024; 416:5037-5048. [PMID: 39031229 DOI: 10.1007/s00216-024-05442-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2024] [Revised: 06/27/2024] [Accepted: 07/05/2024] [Indexed: 07/22/2024]
Abstract
The emergence of a crystal nucleus from disordered states is a critical and challenging aspect of the crystallization process, primarily due to the extremely short length and timescales involved. Methods such as liquid-cell or low-dose focal-series transmission electron microscopy (TEM) are often employed to probe these events. In this study, we demonstrate that ion mobility spectrometry-mass spectrometry (IMS-MS) offers a complementary and insightful perspective on the nucleation process by examining the sizes and shapes of small clusters, specifically those ranging from n = 2 to 40. Our findings reveal the significant role of sulfate ions in the growth of adeninediium sulfate clusters, which are the precursors to the formation of single crystals. Specifically, sulfate ions stabilize adenine clusters at the 1:1 ratio. In contrast, guanine sulfate forms smaller clusters with varied ratios, which become stable as they approach the 1:2 ratio. The nucleation size is predicted to be between n = 8 and 14, correlating well with the unit cell dimensions of adenine crystals. This correlation suggests that IMS-MS can identify critical nucleation sizes and provide valuable structural information consistent with established crystallographic data. We also discuss the strengths and limitations of IMS-MS in this context. IMS-MS offers rapid and robust experimental protocols, making it a valuable tool for studying the effects of various additives on the assembly of small molecules. Additionally, it aids in elucidating nucleation processes and the growth of different crystal polymorphs.
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Affiliation(s)
| | - Happy Abena Safoah
- Department of Chemistry, University of Tennessee, Knoxville, TN, 37996, USA
| | - Thanh D Do
- Department of Chemistry, University of Tennessee, Knoxville, TN, 37996, USA.
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Kessentini Y, Ben Ahmed A, Al-Juaid S, Elaoud Z. Phase transition, nonlinear optical parameters and electrical properties in 4-benzylpiperidinium tetraoxoselenate monohydrate. J SOLID STATE CHEM 2022. [DOI: 10.1016/j.jssc.2022.123286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Messoudi N, Messoudi N, Elleuch S, Jarraya K. STRUCTURE STUDY, HIRSHFELD SURFACE ANALYSIS, THERMAL, VIBRATIONAL AND DFT INVESTIGATION OF 2,4,6-TRIAMINO-1,3,5-TRIAZIN-1-IUM SELENATE. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621080175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Takouachet R, Benali-Cherif R, Bendeif EE, Jelsch C, Cherif FY, Rahmouni A, Benali-Cherif N. The supramolecular behavior and molecular recognition of adeninium cations on anionic hydrogen selenite/diselenite frameworks: A structural and theoretical analysis. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129836] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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5
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Ouannassi F, Berrah F, Boursas F, Bouacida S. Structural, spectral and thermal properties of a supramolecular assembly based on p-phenylenediamine and trichloroacetic acid: A combined experimental and computational study. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Messoudi N, Messoudi N, Litaiem H, Jarraya K. Crystal structure, vibrational study and dielectric behavior of a new amino pyridinium selenate monohydrate [C5H7N2]2[SeO4].H2O. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.07.101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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XRD, FT-IR, FT-Raman spectra and ab initio HF vibrational analysis of bis (5-amino-3-carboxy-1H-1,2,4-triazol-4-ium) selenate dihydrate. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.12.037] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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8
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Crystal structure, Hirshfeld surface analysis, thermal behavior and IR investigation of a new organic selenate-selenide [C 3 H 12 N 2 ] 2 (SeO 4 )(SeO 3 )·4H 2 O. JOURNAL OF SAUDI CHEMICAL SOCIETY 2017. [DOI: 10.1016/j.jscs.2017.05.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Bouaziz E, Ben Hassen C, Chniba-Boudjada N, Daoud A, Mhiri T, Boujelbene M. Crystal structure, Hirshfeld surface analysis, vibrational, thermal behavior and UV spectroscopy of (2,6-diaminopyridinium) dihydrogen arsenate. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.05.043] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Diallo W, Diop L, Diop CAK, Plasseraud L, Cattey H. Two new organic-selenate salts: syntheses and crystal structures of bis(di- iso-propylammonium) selenate and di- n-butylammonium hydrogenoselenate. ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES 2017. [DOI: 10.1515/znb-2017-0032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Two new dialkyammonium selenate salts [i-Pr2NH2]2[SeO4] (1) and [n-Bu2NH2][HSeO4] (2) have been isolated and characterized by single-crystal X-ray diffraction. Salt 1 crystallizes in the monoclinic system, space group P21/n with a=8.7190(5), b=8.8500(4), c=22.5953(9) Å, β=94.6290(17)°, V=1737.84(14) Å3 and Z=4. Salt 2 crystallizes in the monoclinic system space group P21/n with a=10.9328(9), b=8.1700(6), c=13.8095(11) Å, β=97.130(3)°, V=1223.94(17) Å3 and Z=4. In both salts, dialkylammonium cations and selenate anions are connected through NH···O and OH···O hydrogen bonds. In the crystal structure, 1 and 2 are organized in layer-like arrangements. Structural characterizations were completed by infrared and 1H, 13C{1H} and 77Se NMR spectroscopy and elemental analysis which corroborate the X-ray elucidations.
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Affiliation(s)
- Waly Diallo
- Laboratoire de Chimie Minérale et Analytique , Département de Chimie, Faculté des Sciences et Techniques , Université Cheikh Anta Diop , Dakar , Sénégal
| | - Libasse Diop
- Laboratoire de Chimie Minérale et Analytique , Département de Chimie, Faculté des Sciences et Techniques , Université Cheikh Anta Diop , Dakar , Sénégal
| | - Cheikh Abdoul Khadir Diop
- Laboratoire de Chimie Minérale et Analytique , Département de Chimie, Faculté des Sciences et Techniques , Université Cheikh Anta Diop , Dakar , Sénégal
| | - Laurent Plasseraud
- ICMUB UMR CNRS 6302, Université de Bourgogne Franche-Comté , Faculté des Sciences, 9 avenue Alain Savary , F-2100 Dijon , France
| | - Hélène Cattey
- ICMUB UMR CNRS 6302, Université de Bourgogne Franche-Comté , Faculté des Sciences, 9 avenue Alain Savary , F-2100 Dijon , France
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Thirunarayanan S, Arjunan V, Marchewka M, Mohan S. Structure, vibrations and quantum chemical investigations of hydrogen bonded complex of bis(1–hydroxy–2–methylpropan–2–aminium)selenate. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.12.065] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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12
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Ben Hassen C, Dammak T, Chniba-Boudjada N, Mhiri T, Boujelbene M. Chemical synthesis, crystal structure, vibrational spectroscopy, non-linear optical properties and DFT calculation of bis (2,6-diaminopyridinium) sulfate monohydrate. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.07.060] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Bisson PJ, Whitten JE. A compact Raman converter for UV-VIS spectrometers. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2015; 86:055107. [PMID: 26026558 DOI: 10.1063/1.4921235] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
A small form factor, easily constructed converter that adapts fiber coupled UV/VIS CCD detector-based spectrometers into a right angle scattering Raman spectrometer is described. Its design philosophy and design are discussed. An example measurement, the depolarization ratio of carbon tetrachloride, a classic Raman test compound, is presented. The unique instrument features a blue-violet (405 nm wavelength) diode laser that takes advantage of the inverse fourth power wavelength dependence of Raman scattering. The converter also features Glan-Thompson polarizing prisms that enable measurement of depolarization ratios. The spectrometer is also capable of measuring a standard Raman spectrum. A fiber optic link offers flexibility when adapting the converter to any spectrometer system that accepts a fiber optic input. The performance of the instrument is critically discussed in the context of an example measurement.
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Affiliation(s)
- Patrick J Bisson
- Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854, USA
| | - James E Whitten
- Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854, USA
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