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Pattanaik S, Vishwkarma AK, Yadav T, Shakerzadeh E, Sahu D, Chakroborty S, Tripathi PK, Zereffa EA, Malviya J, Barik A, Sarankar SK, Sharma P, Upadhye VJ, Wagadre S. In silico investigation on sensing of tyramine by boron and silicon doped C 60 fullerenes. Sci Rep 2023; 13:22264. [PMID: 38097755 PMCID: PMC10721924 DOI: 10.1038/s41598-023-49414-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 12/07/2023] [Indexed: 12/17/2023] Open
Abstract
The present communication deals with the adsorption of tyramine neurotransmitter over the surface of pristine, Boron (B) and Silicon (Si) doped fullerenes. Density functional theory (DFT) calculations have been used to investigate tyramine adsorption on the surface of fullerenes in terms of stability, shape, work function, electronic characteristics, and density of state spectra. The most favourable adsorption configurations for tyramine have been computed to have adsorption energies of - 1.486, - 30.889, and - 31.166 kcal/mol, respectively whereas for the rest three configurations, it has been computed to be - 0.991, - 6.999, and - 8.796 kcal/mol, respectively. The band gaps for all six configurations are computed to be 2.68, 2.67, 2.06, 2.17, 2.07, and 2.14 eV, respectively. The band gap of pristine, B and Si doped fullerenes shows changes in their band gaps after adsorption of tyramine neurotransmitters. However, the change in band gaps reveals more in B doped fullerene rather than pristine and Si doped fullerenes. The change in band gaps of B and Si doped fullerenes leads a change in the electrical conductivity which helps to detect tyramine. Furthermore, natural bond orbital (NBO) computations demonstrated a net charge transfer of 0.006, 0.394, and 0.257e from tynamine to pristine, B and Si doped fullerenes.
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Affiliation(s)
- S Pattanaik
- Sri Satya Sai University of Technology and Medical Sciences, Sehore, Bhopal, M.P., India
| | - A K Vishwkarma
- Department of Physics, Institute of Science, Banaras Hindu University, Varanasi, India
| | - T Yadav
- Department of Basic Sciences, IITM, IES University, Bhopal, M.P., India
| | - E Shakerzadeh
- Chemistry Department, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - D Sahu
- School of Applied Sciences, Centurion University of Technology and Management, Bhubaneswar, Odisha, India
| | - S Chakroborty
- Department of Basic Sciences, IITM, IES University, Bhopal, M.P., India.
| | - P K Tripathi
- Department of Physics, Sharda University, Greater Noida, U.P., India.
| | - E A Zereffa
- School of Applied Natural Science, Department of Applied Chemistry, Adama Science and Technology University, Adama, Ethiopia.
| | - J Malviya
- Department of Life Sciences and Biological Sciences, IES University, Bhopal, M.P., India
| | - A Barik
- CIPET: Institute of Petrochemicals Technology [IPT], Bhubaneswar, Odisha, India
| | - S K Sarankar
- Faculty of Pharmacy, Mansarovar Global University, Sehore, M.P., 466111, India
| | - P Sharma
- Department of Pharmacy, Barkatullah University, Bhopal, India
| | - V J Upadhye
- Departmentt of Microbiology, Parul Institute of Applied Sciences (PIAS), Parul University, PO Limda, Tal Waghodia, 391760, Vadodara, Gujarat, India
| | - S Wagadre
- Department of Basic Sciences, IITM, IES University, Bhopal, M.P., India
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Lemos Silva RA, Scalabrini Machado DF, de Oliveira HCB, Ribeiro L, da Silva Filho DA. Theoretical study of the interaction of fullerenes with the emerging contaminant carbamazepine for detection in aqueous environments. Sci Rep 2022; 12:15848. [PMID: 36151225 PMCID: PMC9508123 DOI: 10.1038/s41598-022-19258-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Accepted: 08/26/2022] [Indexed: 11/16/2022] Open
Abstract
The global increase in drug consumption exposes the growing need to develop new systems for the detection, capture, and treatment of bioactive molecules. Carbamazepine is one instance of such contaminants at the top of the ranking commonly found in sewage treatment systems. This work, therefore, presents a theoretical study of fullerene C60 and its derivatives with substitutional doping with B, Al, Ga, Si, Ge, N and P, for the detection and capture of carbamazepine is aqueous medium. Solvation effects were included by means of the Polarizable Continuum Solvent method. The results indicate that doped fullerenes are sensitive for the detection of carbamazepine both in gaseous and aquatic environments. Investigation on the intermolecular interactions between the drug and the fullerene molecule were carried out, allowing the characterization of the interactions responsible for stabilizing the adsorption of carbamazepine to the fullerenes. The theoretical survey revealed that fullerenes doped with Al, Ga, Si and Ge chemically adsorb carbamazepine whereas for the case of fullerenes doped with other heteroatoms physisorption is responsible for the molecular recognition. Relying on DFT calculations, the fullerene derivatives C59Al, C59Si and C59Ga are the most suitable to act both as a sensor and to uptake carbamazepine in aquatic environments.
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Affiliation(s)
| | - Daniel F Scalabrini Machado
- Laboratório de Modelagem de Sistemas Complexos (LMSC), Instituto de Química, Universidade de Brasília, Brasília, 70919-970, Brazil
| | - Heibbe C B de Oliveira
- Laboratório de Estrutura Eletrônica e Dinâmica Molecular (LEEDMOL), Instituto de Química, Universidade Federal de Goiás, Goiânia, Brazil
| | - Luciano Ribeiro
- Grupo de Química Teórica e Estrutural de Anápolis, Campus de Ciências Exatas de Anápolis, Universidade Estadual de Goiás, Anápolis, Brazil
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Bibi S, Urrehman S, Khalid L, Yaseen M, Khan AQ, Jia R. Metal doped fullerene complexes as promising drug delivery materials against COVID-19. ACTA ACUST UNITED AC 2021; 75:6487-6497. [PMID: 34393329 PMCID: PMC8351569 DOI: 10.1007/s11696-021-01815-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Accepted: 08/02/2021] [Indexed: 12/18/2022]
Abstract
An outbreak of respiratory disorder caused by coronavirus has been named as coronavirus infection 2019 (COVID-19). To find a specific treatment against this disease researchers are at the frontline. To cure COVID-19, favipiravir (FPV) has been reported as an effective drug based on its high recovery rate. Among nanomaterials, fullerene C60 has achieved enormous attention as a drug delivery vehicle due to its good bioavailability and low toxicity. Hence, in this work, we have investigated the potential of metal-doped fullerene as a drug carrier, based on DFT calculations by using M06-2X functional and 6-31G(d) basis set in water media. In this research electronic parameters and adsorption energy of FPV on interaction with metal-doped (Cr, Fe, and Ni) fullerene is studied. The charge transfer between drug and doped fullerene has been studied through electrophilicity indexes. The structural and electronic properties are explored in terms of adsorption energy through frontier molecular orbital (FMO) and density of state (DOS). It is observed that doping of fullerene C60 with Cr, Fe, and Ni metals significantly enhances the drug delivery rate and provides numerous advantages including controlled drug release at specific target sites which minimize the generic collection in vivo and reduce the side effects. Thusly, it is suggested that our designed metal-doped complexes might be efficient candidates as drug delivery materials for COVID-19 infection.
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Affiliation(s)
- Shamsa Bibi
- Department of Chemistry, University of Agriculture Faisalabad, Faisalabad, 38000 Pakistan
| | - Shafiq Urrehman
- Department of Chemistry, University of Agriculture Faisalabad, Faisalabad, 38000 Pakistan
| | - Laryeb Khalid
- Department of Chemistry, University of Agriculture Faisalabad, Faisalabad, 38000 Pakistan
| | - Muhammad Yaseen
- Spin-Optoelectronics and Ferro-Thermoelectric (SOFT) Materials and Devices Laboratory, Department of Physics, University of Agriculture Faisalabad, Faisalabad, 38000 Pakistan
| | - Abdul Quyyam Khan
- Pakistan Council of Scientific and Industrial Research Laboratories Complex, , Ferozepur Road, Lahore, 54600 Pakistan
| | - Ran Jia
- Institute of Theoretical Chemistry and College of Chemistry, Jilin University, Changchun, 130000 China
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Manafi Moghadam M, Zamani M. Electronic structure and spectroscopy of C60 nitroaryl radical adducts. COMPUT THEOR CHEM 2021. [DOI: 10.1016/j.comptc.2021.113185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Rahman H, Hossain MR, Ferdous T. The recent advancement of low-dimensional nanostructured materials for drug delivery and drug sensing application: A brief review. J Mol Liq 2020; 320:114427. [PMID: 33012931 PMCID: PMC7525470 DOI: 10.1016/j.molliq.2020.114427] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Revised: 09/17/2020] [Accepted: 09/23/2020] [Indexed: 01/07/2023]
Abstract
In this review article, we have presented a detailed analysis of the recent advancement of quantum mechanical calculations in the applications of the low-dimensional nanomaterials (LDNs) into biomedical fields like biosensors and drug delivery systems development. Biosensors play an essential role for many communities, e.g. law enforcing agencies to sense illicit drugs, medical communities to remove overdosed medications from the human and animal body etc. Besides, drug delivery systems are theoretically being proposed for many years and experimentally found to deliver the drug to the targeted sites by reducing the harmful side effects significantly. In current COVID-19 pandemic, biosensors can play significant roles, e.g. to remove experimental drugs during the human trials if they show any unwanted adverse effect etc. where the drug delivery systems can be potentially applied to reduce the side effects. But before proceeding to these noble and expensive translational research works, advanced theoretical calculations can provide the possible outcomes with considerable accuracy. Hence in this review article, we have analyzed how theoretical calculations can be used to investigate LDNs as potential biosensor devices or drug delivery systems. We have also made a very brief discussion on the properties of biosensors or drug delivery systems which should be investigated for the biomedical applications and how to calculate them theoretically. Finally, we have made a detailed analysis of a large number of recently published research works where theoretical calculations were used to propose different LDNs for bio-sensing and drug delivery applications.
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Affiliation(s)
- Hamidur Rahman
- Department of Physics, Jahangirnagar University, Savar, Dhaka 1342, Bangladesh
| | - Md Rakib Hossain
- Department of Physics, Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Gopalganj 8100, Bangladesh
| | - Tahmina Ferdous
- Department of Physics, Jahangirnagar University, Savar, Dhaka 1342, Bangladesh
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Mahboobeh Kian, Elham Tazikeh-Lemeski. Adsorption Behavior of Aromasin onto C20 and C24 Nano-Cages: Density Functional Theory Study. RUSS J INORG CHEM+ 2020. [DOI: 10.1134/s0036023620120074] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Parlak C, Tepe M, Bağlayan Ö, Alver Ö. Investigation of detection and adsorption properties of β-propiolactone with silicon and aluminum doped fullerene C60 using density functional theory. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128346] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Omri N, Bu Y. Azomethine ylide addition impact on functionalized [60]Fullerene and [60]Boron-Nitride: Anticancer Doxorubicin and Boronic Chalcone drugs binding characteristics with mono- and bis-nanocarriers. Colloids Surf B Biointerfaces 2020; 196:111277. [PMID: 32750606 DOI: 10.1016/j.colsurfb.2020.111277] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2020] [Revised: 07/13/2020] [Accepted: 07/23/2020] [Indexed: 12/11/2022]
Abstract
By functionalizing [60]Fullerene (C60) and [60]Boron-Nitride ([60]BN), novel systems are proposed under two alternatives according to the intruder localization modes. To detail their bindings with Doxorubicin (DOX) and Boronic Chalcone (BCHA), we studied the azomethine ylide (AZMYtrp and AZMYtyr) addition impact on the drug-loading efficacy. As a result, the formation of reactive [60]CBNAZMYtrp nanocarriers mainly proceeded through photoexcitation on the triplet state, in contrast to those of [60]BNCAZMYtrp. The addition of amino acids strongly improved the interaction between DOX/BCHA and mono- and bis-nanocarriers compared to isolated anticancer drugs randomly dispersed in the solvent. Eight possible bis-nanocarriers regioisomers are cheeked for the second AZMYtrp addition sites. In fact, the trans1 isomer is considered as the most stable to adsorb DOX-DOX, DOX-BCHA or BCHA-BCHA with mole fraction of about 84 %. The lowest electronic bandgap (0.529 eV) of B25N25C10AZMYtyrAZMYtyr confirmed that the presence of hydrogen-bonding and OH-π, CH-π and CO-π interactions improved the binding affinity of bis-nanocarriers with DOX-DOX. The AZMYtrp indole ring hydrogen is bonded with the anticancer drug hydroxyl group and stabilized DOX-DOX-bis-nanocarriers complexes. The formation of new sp3 regions and π-π interactions with the carbon-doped [60]BN decreased the bandgap (0.64 eV) and stabilized the B25N25C10AZMYtyrAZMYtyr-DOX-BCHA complex.
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Affiliation(s)
- Nabil Omri
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, People's Republic of China
| | - Yuxiang Bu
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, People's Republic of China.
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Adsorption behavior of letrozole on pure, Ge- and Si-doped C60 fullerenes: a comparative DFT study. MONATSHEFTE FUR CHEMIE 2020. [DOI: 10.1007/s00706-019-02524-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Parlak C, Alver Ö. Single and double silicon decoration of fullerene C60 and single walled carbon nanotubes for adsorption and detection of TNT. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.126881] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Osikoya AO, Opoku F, Dikio ED, Govender PP. High-Throughput 2D Heteroatom Graphene Bioelectronic Nanosculpture: A Combined Experimental and Theoretical Study. ACS APPLIED MATERIALS & INTERFACES 2019; 11:11238-11250. [PMID: 30817112 DOI: 10.1021/acsami.9b01914] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
In this study, chemical vapor deposition-synthesized heteroatom graphene (HGr) bioelectronic interfaces have been developed for ultrafast, all-electronic detection and analysis of molecules by driving them through tiny holes-or atompores-in a thin lattice of the graphene sheet, including the efforts toward facilitating enhanced electrocatalytic and mapping electron transport activities. The presence of chlorine, nitrogen, and oxygen in the crystalline graphitic layers (<7) has been confirmed using Raman spectroscopy, X-ray photoelectron spectroscopy, and high-resolution transmission electron microscopy. We report a swift bioelectrocatalytic response to step-by-step additions of the substrate with the achievement of a steady current within a few seconds. The response limit was 2.07 μM with a dynamic range of sensing from 2.07 μM to 2.97 mM. The electronic properties and adsorption energies of hydroquinone and p-benzophenone molecule adsorption on pristine, O-, N-, and Cl-doped graphene nanosheet surfaces were systematically investigated using first-principles calculations. The results revealed that the adsorption capacity was improved upon doping graphene nanosheets with O, N, and Cl atoms. Hence, Cl-doped graphene nanosheets were shown as a promising adsorbent toward hydroquinone and p-benzophenone detection.
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Affiliation(s)
- Adeniyi Olugbenga Osikoya
- Department of Applied Chemistry , University of Johannesburg , P.O. Box 17011, Doornfontein 2028 Johannesburg , South Africa
| | - Francis Opoku
- Department of Applied Chemistry , University of Johannesburg , P.O. Box 17011, Doornfontein 2028 Johannesburg , South Africa
| | - Ezekiel Dixon Dikio
- Applied Chemistry and Nanoscience Laboratory, Department of Chemistry , Vaal University of Technology , P.O. Box X021, 1900 Vanderbijlpark , South Africa
| | - Penny Poomani Govender
- Department of Applied Chemistry , University of Johannesburg , P.O. Box 17011, Doornfontein 2028 Johannesburg , South Africa
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