• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (5071034)   Today's Articles (71)
For: Shen WX, Liang SR, Jiang YY, Chen YZ. Enhanced metagenomic deep learning for disease prediction and consistent signature recognition by restructured microbiome 2D representations. Patterns (N Y) 2022;4:100658. [PMID: 36699735 PMCID: PMC9868677 DOI: 10.1016/j.patter.2022.100658] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Revised: 07/15/2022] [Accepted: 11/15/2022] [Indexed: 12/23/2022]
Number Cited by Other Article(s)
1
Yang SY, Han SM, Lee JY, Kim KS, Lee JE, Lee DW. Advancing Gut Microbiome Research: The Shift from Metagenomics to Multi-Omics and Future Perspectives. J Microbiol Biotechnol 2025;35:e2412001. [PMID: 40223273 PMCID: PMC12010094 DOI: 10.4014/jmb.2412.12001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2024] [Revised: 02/14/2025] [Accepted: 02/24/2025] [Indexed: 04/15/2025]
2
Sirasani JP, Gardner C, Jung G, Lee H, Ahn TH. Bioinformatic approaches to blood and tissue microbiome analyses: challenges and perspectives. Brief Bioinform 2025;26:bbaf176. [PMID: 40269515 PMCID: PMC12018304 DOI: 10.1093/bib/bbaf176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Revised: 03/05/2025] [Accepted: 03/25/2025] [Indexed: 04/25/2025]  Open
3
Przymus P, Rykaczewski K, Martín-Segura A, Truu J, Carrillo De Santa Pau E, Kolev M, Naskinova I, Gruca A, Sampri A, Frohme M, Nechyporenko A. Deep learning in microbiome analysis: a comprehensive review of neural network models. Front Microbiol 2025;15:1516667. [PMID: 39911715 PMCID: PMC11794229 DOI: 10.3389/fmicb.2024.1516667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2024] [Accepted: 12/16/2024] [Indexed: 02/07/2025]  Open
4
Roy G, Prifti E, Belda E, Zucker JD. Deep learning methods in metagenomics: a review. Microb Genom 2024;10:001231. [PMID: 38630611 PMCID: PMC11092122 DOI: 10.1099/mgen.0.001231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Accepted: 03/27/2024] [Indexed: 04/19/2024]  Open
5
Luo F, Wang X, Ye C, Sun H. Microbial Biomarkers in Liquid Biopsy for Cancer: An Overview and Future Directions. Cancer Control 2024;31:10732748241292019. [PMID: 39431347 PMCID: PMC11500238 DOI: 10.1177/10732748241292019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2024] [Revised: 09/23/2024] [Accepted: 09/27/2024] [Indexed: 10/22/2024]  Open
6
Shen WX, Chen YZ. Toward ordered -omics data science: Researchers on the magic of turning metagenomic chaos into image-like patterns. PATTERNS (NEW YORK, N.Y.) 2023;4:100673. [PMID: 36699736 PMCID: PMC9868643 DOI: 10.1016/j.patter.2022.100673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
7
Lee Y, Cappellato M, Di Camillo B. Machine learning-based feature selection to search stable microbial biomarkers: application to inflammatory bowel disease. Gigascience 2022;12:giad083. [PMID: 37882604 PMCID: PMC10600917 DOI: 10.1093/gigascience/giad083] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 08/23/2023] [Accepted: 09/17/2023] [Indexed: 10/27/2023]  Open
PrevPage 1 of 1 1Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA