Cloning, high yield overexpression, purification, and characterization of AlgH, a regulator of alginate biosynthesis in Pseudomonas aeruginosa

Effects of Sub-Minimum Inhibitory Concentrations of Gentamicin on Alginate Produced by Clinical Isolates of Pseudomonas aeruginosa

Background

Bacterial virulence factors may be influenced by sub-minimum inhibitory concentrations (sub-MICs) of antibiotics. The main purpose of this study was to investigate the effects of gentamicin at sub-MICs (0.5 MIC and 0.25 MIC) on alginate production of clinical isolates of Pseudomonas aeruginosa.

Materials and Methods

The minimum inhibitory concentrations of gentamicin against 88 clinical isolates of P. aeruginosa were determined using the broth microdilution method. Alginate production of the isolates in the absence and presence of gentamicin at sub-MICs was assessed by the carbazole method. The presence of alginate in clinical isolates was confirmed by the detection of alginate genes (algD and algU) using the PCR method.

Results

All the isolates had the ability of alginate production and were positive for algD and algU genes. sub-MICs of gentamicin significantly increased alginate production of 34 isolates (38.6%). On the other hand, in 49 isolates (55.7%), alginate production was significantly increased after treatment with sub-MICs of gentamicin. In five isolates (5.7%), the alginate production was reduced in exposure to 0.5 MIC of gentamicin while it was increased by gentamicin at 0.25 MIC.

Conclusion

This study showed different effects of gentamicin at sub-MICs on the alginate production of clinical isolates of P. aeruginosa. Further research is highly recommended to understand the mechanism of different responses of P. aeruginosa isolates to the exposure of sub-MICs of gentamicin.

Solution structure and properties of AlgH from Pseudomonas aeruginosa

In Pseudomonas aeruginosa, the algH gene regulates the cellular concentrations of a number of enzymes and the production of several virulence factors, and is suggested to serve a global regulatory function. The precise mechanism by which the algH gene product, the AlgH protein, functions is unknown. The same is true for AlgH family members from other bacteria. In order to lay the groundwork for understanding the physical underpinnings of AlgH function, we examined the structure and physical properties of AlgH in solution. Under reducing conditions, results of NMR, electrophoretic mobility, and sedimentation equilibrium experiments indicate AlgH is predominantly monomeric and monodisperse in solution. Under nonreducing conditions intra and intermolecular disulfide bonds form, the latter promoting AlgH oligomerization. The high-resolution solution structure of AlgH reveals alpha/beta-sandwich architecture fashioned from ten beta strands and seven alpha helices. Comparison with available structures of orthologues indicates conservation of overall structural topology. The region of the protein most strongly conserved structurally also shows the highest amino acid sequence conservation and, as revealed by hydrogen-deuterium exchange studies, is also the most stable. In this region, evolutionary trace analysis identifies two clusters of amino acid residues with the highest evolutionary importance relative to all other AlgH residues. These frame a partially solvent exposed shallow hydrophobic cleft, perhaps identifying a site for intermolecular interactions. The results establish a physical foundation for understanding the structure and function of AlgH and AlgH family proteins and should be of general importance for further investigations of these and related proteins.

The characterisation of a novel, covalently modified, amphiphilic alginate derivative, which retains gelling and non-toxic properties

The characterisation of a novel amphiphilic material, Alg-C4, produced from butanol linked by esterification to alginate is presented. The novel derivative retains the gelling and non-toxic properties of native alginate. FTIR spectra of Alg-C4 contained the characteristic hydroxyl and carboxyl bands, but also featured additional peaks at 1736 and 1134 cm(-1), indicating the presence of ester bonds. NMR studies showed the presence of butyl groups. The endothermic peak and exothermic peak present in the DSC thermogram of native alginate were also apparent in the Alg-C4 thermogram, but had shifted to lower temperatures (from 106 to 87 degrees C and from 254 to 247 degrees C, respectively). In addition, the exothermic peak was significantly reduced for Alg-C4 (5 mW compared to 20 mW in native alginate). Scanning electron microscopy was used to examine surface topography. The native alginate beads appeared smooth while Alg-C4 beads had a different, rougher appearance. Using circular dichroism it was found that the ratio of mannuronic to guluronic residues in the Alg-C4 was markedly increased compared to the native alginate (1.33 to 2.47), suggesting the preferential esterification of butanol to the guluronic residues. Exposure of ovarian granulosa cells in vitro to the Alg-C4 material demonstrated that granulosa cell viability (MTT test) was unchanged when compared to native alginate, which is regarded as non-toxic. The novel material is very stable, giving identical FTIR, DSC and gelling performance after 12 months storage at temperatures ranging from 10 to 20 degrees C. The data support the successful preparation of a stable modified alginate with characteristic hydrophilic properties and, in addition, a novel hydrophobic character.