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Besnard C, Marie A, Sasidharan S, Harper RA, Shelton RM, Landini G, Korsunsky AM. Synchrotron X-ray Studies of the Structural and Functional Hierarchies in Mineralised Human Dental Enamel: A State-of-the-Art Review. Dent J (Basel) 2023; 11:98. [PMID: 37185477 PMCID: PMC10137518 DOI: 10.3390/dj11040098] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 03/19/2023] [Accepted: 03/28/2023] [Indexed: 05/17/2023] Open
Abstract
Hard dental tissues possess a complex hierarchical structure that is particularly evident in enamel, the most mineralised substance in the human body. Its complex and interlinked organisation at the Ångstrom (crystal lattice), nano-, micro-, and macro-scales is the result of evolutionary optimisation for mechanical and functional performance: hardness and stiffness, fracture toughness, thermal, and chemical resistance. Understanding the physical-chemical-structural relationships at each scale requires the application of appropriately sensitive and resolving probes. Synchrotron X-ray techniques offer the possibility to progress significantly beyond the capabilities of conventional laboratory instruments, i.e., X-ray diffractometers, and electron and atomic force microscopes. The last few decades have witnessed the accumulation of results obtained from X-ray scattering (diffraction), spectroscopy (including polarisation analysis), and imaging (including ptychography and tomography). The current article presents a multi-disciplinary review of nearly 40 years of discoveries and advancements, primarily pertaining to the study of enamel and its demineralisation (caries), but also linked to the investigations of other mineralised tissues such as dentine, bone, etc. The modelling approaches informed by these observations are also overviewed. The strategic aim of the present review was to identify and evaluate prospective avenues for analysing dental tissues and developing treatments and prophylaxis for improved dental health.
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Affiliation(s)
- Cyril Besnard
- MBLEM, Department of Engineering Science, University of Oxford, Parks Road, Oxford OX1 3PJ, Oxfordshire, UK
| | - Ali Marie
- MBLEM, Department of Engineering Science, University of Oxford, Parks Road, Oxford OX1 3PJ, Oxfordshire, UK
| | - Sisini Sasidharan
- MBLEM, Department of Engineering Science, University of Oxford, Parks Road, Oxford OX1 3PJ, Oxfordshire, UK
| | - Robert A. Harper
- School of Dentistry, University of Birmingham, 5 Mill Pool Way, Edgbaston, Birmingham B5 7EG, West Midlands, UK
| | - Richard M. Shelton
- School of Dentistry, University of Birmingham, 5 Mill Pool Way, Edgbaston, Birmingham B5 7EG, West Midlands, UK
| | - Gabriel Landini
- School of Dentistry, University of Birmingham, 5 Mill Pool Way, Edgbaston, Birmingham B5 7EG, West Midlands, UK
| | - Alexander M. Korsunsky
- MBLEM, Department of Engineering Science, University of Oxford, Parks Road, Oxford OX1 3PJ, Oxfordshire, UK
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2
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Scatigno C, Festa G. Neutron Imaging and Learning Algorithms: New Perspectives in Cultural Heritage Applications. J Imaging 2022; 8:jimaging8100284. [PMID: 36286378 PMCID: PMC9605401 DOI: 10.3390/jimaging8100284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Revised: 10/04/2022] [Accepted: 10/12/2022] [Indexed: 11/06/2022] Open
Abstract
Recently, learning algorithms such as Convolutional Neural Networks have been successfully applied in different stages of data processing from the acquisition to the data analysis in the imaging context. The aim of these algorithms is the dimensionality of data reduction and the computational effort, to find benchmarks and extract features, to improve the resolution, and reproducibility performances of the imaging data. Currently, no Neutron Imaging combined with learning algorithms was applied on cultural heritage domain, but future applications could help to solve challenges of this research field. Here, a review of pioneering works to exploit the use of Machine Learning and Deep Learning models applied to X-ray imaging and Neutron Imaging data processing is reported, spanning from biomedicine, microbiology, and materials science to give new perspectives on future cultural heritage applications.
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Törnquist E, Le Cann S, Tengattini A, Helfen L, Kok J, Hall SA, Isaksson H. The Hydration State of Bone Tissue Affects Contrast in Neutron Tomographic Images. Front Bioeng Biotechnol 2022; 10:911866. [PMID: 35782510 PMCID: PMC9247154 DOI: 10.3389/fbioe.2022.911866] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Accepted: 05/24/2022] [Indexed: 12/25/2022] Open
Abstract
Neutron tomography has emerged as a promising imaging technique for specific applications in bone research. Neutrons have a strong interaction with hydrogen, which is abundant in biological tissues, and they can penetrate through dense materials such as metallic implants. However, in addition to long imaging times, two factors have led to challenges in running in situ mechanical characterization experiments on bone tissue using neutron tomography: 1) the high water content in specimens reduces the visibility of internal trabecular structures; 2) the mechanical properties of bone are dependent on the hydration state of the tissue, with drying being reported to cause increased stiffness and brittleness. This study investigates the possibility of improving image quality in terms of neutron transmission and contrast between material phases by drying and rehydrating in heavy water. Rat tibiae and trabecular bovine bone plugs were imaged with neutron tomography at different hydration states and mechanical testing of the bone plugs was carried out to assess effects of drying and rehydration on the mechanical properties of bone. From analysis of image histograms, it was found that drying reduced the contrast between bone and soft tissue, but the contrast was restored with rehydration. Contrast-to-noise ratios and line profiles revealed that the contrast between bone tissue and background was reduced with increasing rehydration duration but remained sufficient for identifying internal structures as long as no free liquid was present inside the specimen. The mechanical analysis indicated that the proposed fluid exchange protocol had no adverse effects on the mechanical properties.
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Affiliation(s)
- Elin Törnquist
- Department of Biomedical Engineering, Lund University, Lund, Sweden
| | - Sophie Le Cann
- CNRS, Université Paris Est Créteil, Université Gustave Eiffel, UMR 8208, MSME, F-94010, Créteil, France
| | - Alessandro Tengattini
- Institut Laue-Langevin, Grenoble, France
- Université Grenoble Alpes, CNRS, Grenoble INP 3SR, Grenoble, France
| | | | - Joeri Kok
- Department of Biomedical Engineering, Lund University, Lund, Sweden
| | | | - Hanna Isaksson
- Department of Biomedical Engineering, Lund University, Lund, Sweden
- *Correspondence: Hanna Isaksson,
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4
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Törnquist E, Le Cann S, Tudisco E, Tengattini A, Andò E, Lenoir N, Hektor J, Raina DB, Tägil M, Hall SA, Isaksson H. Dual modality neutron and x-ray tomography for enhanced image analysis of the bone-metal interface. Phys Med Biol 2021; 66. [PMID: 34010812 DOI: 10.1088/1361-6560/ac02d4] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Accepted: 05/19/2021] [Indexed: 11/11/2022]
Abstract
The bone tissue formed at the contact interface with metallic implants, particularly its 3D microstructure, plays a pivotal role for the structural integrity of implant fixation. X-ray tomography is the classical imaging technique used for accessing microstructural information from bone tissue. However, neutron tomography has shown promise for visualising the immediate bone-metal implant interface, something which is highly challenging with x-rays due to large differences in attenuation between metal and biological tissue causing image artefacts. To highlight and explore the complementary nature of neutron and x-ray tomography, proximal rat tibiae with titanium-based implants were imaged with both modalities. The two techniques were compared in terms of visualisation of different material phases and by comparing the properties of the individual images, such as the contrast-to-noise ratio. After superimposing the images using a dedicated image registration algorithm, the complementarity was further investigated via analysis of the dual modality histogram, joining the neutron and x-ray data. From these joint histograms, peaks with well-defined grey value intervals corresponding to the different material phases observed in the specimens were identified and compared. The results highlight differences in how neutrons and x-rays interact with biological tissues and metallic implants, as well as the benefits of combining both modalities. Future refinement of the joint histogram analysis could improve the segmentation of structures and tissues, and yield novel information about specimen-specific properties such as moisture content.
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Affiliation(s)
- Elin Törnquist
- Department of Biomedical Engineering, Lund University, Lund, Sweden
| | - Sophie Le Cann
- Department of Biomedical Engineering, Lund University, Lund, Sweden.,MSME, CNRS UMR 8208, Univ Paris Est Creteil, Univ Gustave Eiffel, Creteil, France
| | - Erika Tudisco
- Division of Geotechnical Engineering, Lund University, Lund, Sweden
| | - Alessandro Tengattini
- Institut Laue-Langevin (ILL), Grenoble, France.,Univ. Grenoble Alpes, CNRS, Grenoble INP, 3SR, Grenoble, France
| | - Edward Andò
- Univ. Grenoble Alpes, CNRS, Grenoble INP, 3SR, Grenoble, France
| | - Nicolas Lenoir
- Institut Laue-Langevin (ILL), Grenoble, France.,Univ. Grenoble Alpes, CNRS, Grenoble INP, 3SR, Grenoble, France
| | - Johan Hektor
- LUNARC-Centre for Scientific and Technical Computing at Lund University, Lund University, Lund, Sweden
| | - Deepak Bushan Raina
- Orthopaedics, Department of Clinical Sciences, Lund, Lund University, Lund, Sweden
| | - Magnus Tägil
- Orthopaedics, Department of Clinical Sciences, Lund, Lund University, Lund, Sweden
| | - Stephen A Hall
- Division of Solid Mechanics, Lund University, Lund, Sweden.,Lund Institute of Advanced Neutron and X-ray Science (LINXS), Lund, Sweden
| | - Hanna Isaksson
- Department of Biomedical Engineering, Lund University, Lund, Sweden.,Orthopaedics, Department of Clinical Sciences, Lund, Lund University, Lund, Sweden
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Zanolli C, Schillinger B, Kullmer O, Schrenk F, Kelley J, Rössner GE, Macchiarelli R. When X-Rays Do Not Work. Characterizing the Internal Structure of Fossil Hominid Dentognathic Remains Using High-Resolution Neutron Microtomographic Imaging. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.00042] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
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6
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Jones MEH, Lucas PW, Tucker AS, Watson AP, Sertich JJW, Foster JR, Williams R, Garbe U, Bevitt JJ, Salvemini F. Neutron scanning reveals unexpected complexity in the enamel thickness of an herbivorous Jurassic reptile. J R Soc Interface 2019; 15:rsif.2018.0039. [PMID: 29899156 PMCID: PMC6030635 DOI: 10.1098/rsif.2018.0039] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Accepted: 05/18/2018] [Indexed: 11/12/2022] Open
Abstract
Eilenodontines are one of the oldest radiation of herbivorous lepidosaurs (snakes, lizards and tuatara) characterized by batteries of wide teeth with thick enamel that bear mammal-like wear facets. Unlike most reptiles, eilenodontines have limited tooth replacement, making dental longevity particularly important to them. We use both X-ray and neutron computed tomography to examine a fossil tooth from the eilenodontine Eilenodon (Late Jurassic, USA). Of the two approaches, neutron tomography was more successful and facilitated measurements of enamel thickness and distribution. We find the enamel thickness to be regionally variable, thin near the cusp tip (0.10 mm) but thicker around the base (0.15–0.30 mm) and notably greater than that of other rhynchocephalians such as the extant Sphenodon (0.08–0.14 mm). The thick enamel in Eilenodon would permit greater loading, extend tooth lifespan and facilitate the establishment of wear facets that have sharp edges for orally processing plant material such as horsetails (Equisetum). The shape of the enamel dentine junction indicates that tooth development in Eilenodon and Sphenodon involved similar folding of the epithelium but different ameloblast activity.
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Affiliation(s)
- Marc E H Jones
- Department of Earth Sciences, The Natural History Museum, London, UK .,Department of Genetics and Evolution, School of Biological Sciences, The University of Adelaide, North Terrace, Adelaide, South Australia 5005, Australia.,South Australian Museum, North Terrace, Adelaide, South Australia 5001, Australia
| | - Peter W Lucas
- Smithsonian Tropical Research Institute, Balboa, Panama
| | - Abigail S Tucker
- Craniofacial Development and Stem Cell Biology, King's College London, London, UK
| | - Amy P Watson
- Department of Genetics and Evolution, School of Biological Sciences, The University of Adelaide, North Terrace, Adelaide, South Australia 5005, Australia
| | - Joseph J W Sertich
- Department of Earth Sciences, Denver Museum of Nature and Science, Denver, CO, USA
| | | | - Ruth Williams
- Department of Adelaide Microscopy, The University of Adelaide, Adelaide, South Australia 5001, Australia
| | - Ulf Garbe
- Australian Centre for Neutron Scattering, Australian Nuclear Science and Technology Organisation, Sydney, Australia
| | - Joseph J Bevitt
- Australian Centre for Neutron Scattering, Australian Nuclear Science and Technology Organisation, Sydney, Australia
| | - Floriana Salvemini
- Australian Centre for Neutron Scattering, Australian Nuclear Science and Technology Organisation, Sydney, Australia
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Evidence for increased hominid diversity in the Early to Middle Pleistocene of Indonesia. Nat Ecol Evol 2019; 3:755-764. [PMID: 30962558 DOI: 10.1038/s41559-019-0860-z] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2018] [Accepted: 02/28/2019] [Indexed: 11/08/2022]
Abstract
Since the first discovery of Pithecanthropus (Homo) erectus by E. Dubois at Trinil in 1891, over 200 hominid dentognathic remains have been collected from the Early to Middle Pleistocene deposits of Java, Indonesia, forming the largest palaeoanthropological collection in South East Asia. Most of these fossils are currently attributed to H. erectus. However, because of the substantial morphological and metric variation in the Indonesian assemblage, some robust specimens, such as the partial mandibles Sangiran 5 and Sangiran 6a, were formerly variably allocated to other taxa (Meganthropus palaeojavanicus, Pithecanthropus dubius, Pongo sp.). To resolve the taxonomic uncertainty surrounding these and other contentious Indonesian hominid specimens, we used occlusal fingerprint analysis (OFA) to reconstruct their chewing kinematics; we also used various morphometric approaches based on microtomography to examine the internal dental structures. Our results confirm the presence of Meganthropus as a Pleistocene Indonesian hominid distinct from Pongo, Gigantopithecus and Homo, and further reveal that Dubois's H. erectus paratype molars from 1891 are not hominin (human lineage), but instead are more likely to belong to Meganthropus.
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Urciuoli A, Zanolli C, Fortuny J, Almécija S, Schillinger B, Moyà‐Solà S, Alba DM. Neutron‐based computed microtomography:
Pliobates cataloniae
and
Barberapithecus huerzeleri
as a test‐case study. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2018; 166:987-993. [DOI: 10.1002/ajpa.23467] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2017] [Revised: 02/21/2018] [Accepted: 03/06/2018] [Indexed: 11/06/2022]
Affiliation(s)
- Alessandro Urciuoli
- Institut Català de Paleontologia Miquel CrusafontUniversitat Autònoma de Barcelona, Edifici ICTA‐ICPc/Columnes s/n, Campus de la UAB, 08193 Cerdanyola del Vallès, Barcelona Spain
| | - Clément Zanolli
- Laboratoire AMIS, UMR 5288 CNRSUniversité Toulouse III Paul SabatierToulouse France
| | - Josep Fortuny
- Institut Català de Paleontologia Miquel CrusafontUniversitat Autònoma de Barcelona, Edifici ICTA‐ICPc/Columnes s/n, Campus de la UAB, 08193 Cerdanyola del Vallès, Barcelona Spain
- Centre de Recherches en Paléobiodiversité et PaléoenvironnementsMuséum National d'Histoire Naturelle, Bâtiment de PaléontologieCP38, 8 rue Buffon, Paris 75005 France
| | - Sergio Almécija
- Institut Català de Paleontologia Miquel CrusafontUniversitat Autònoma de Barcelona, Edifici ICTA‐ICPc/Columnes s/n, Campus de la UAB, 08193 Cerdanyola del Vallès, Barcelona Spain
- Center for the Advanced Study of Human Paleobiology, Department of AnthropologyThe George Washington UniversityWashington DC 20052
| | - Burkhard Schillinger
- Technische Universität MünchenFakultat für Physik E21, James‐Franck‐Str.1, Garching D‐85747 Germany
| | - Salvador Moyà‐Solà
- Institut Català de Paleontologia Miquel CrusafontUniversitat Autònoma de Barcelona, Edifici ICTA‐ICPc/Columnes s/n, Campus de la UAB, 08193 Cerdanyola del Vallès, Barcelona Spain
- Institució Catalana de Recerca i Estudis AvançatsPg. Lluís Companys 23, Barcelona 08010 Spain
- Unitat d'Antropologia, Departament de Biologia Animal, Biologia Vegetal i EcologiaUniversitat Autònoma de BarcelonaCerdanyola del Vallès, Barcelona 08193 Spain
| | - David M. Alba
- Institut Català de Paleontologia Miquel CrusafontUniversitat Autònoma de Barcelona, Edifici ICTA‐ICPc/Columnes s/n, Campus de la UAB, 08193 Cerdanyola del Vallès, Barcelona Spain
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9
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Neutron Imaging in Cultural Heritage Research at the FRM II Reactor of the Heinz Maier-Leibnitz Center. J Imaging 2018. [DOI: 10.3390/jimaging4010022] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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10
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Beaudet A. The Emergence of Language in the Hominin Lineage: Perspectives from Fossil Endocasts. Front Hum Neurosci 2017; 11:427. [PMID: 28878641 PMCID: PMC5572361 DOI: 10.3389/fnhum.2017.00427] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2017] [Accepted: 08/09/2017] [Indexed: 12/27/2022] Open
Affiliation(s)
- Amélie Beaudet
- School of Geography, Archaeology and Environmental Studies, University of the WitwatersrandJohannesburg, South Africa.,Department of Anatomy, University of PretoriaPretoria, South Africa
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