1
|
Opoku E, Pawłowski F, Ortiz JV. Electron Propagator Theory of Vertical Electron Detachment Energies of Anions: Benchmarks and Applications to Nucleotides. J Phys Chem A 2023; 127:1085-1101. [PMID: 36656801 DOI: 10.1021/acs.jpca.2c08372] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
A new generation of ab initio electron-propagator self-energy approximations that are free of adjustable parameters is tested on a benchmark set of 55 vertical electron detachment energies of closed-shell anions. Comparisons with older self-energy approximations indicate that several new methods that make the diagonal self-energy approximation in the canonical Hartree-Fock orbital basis provide superior accuracy and computational efficiency. These methods and their acronyms, mean absolute errors (in eV), and arithmetic bottlenecks expressed in terms of occupied (O) and virtual (V) orbitals are the opposite-spin, non-Dyson, diagonal second-order method (os-nD-D2, 0.2, OV2), the approximately renormalized quasiparticle third-order method (Q3+, 0.15, O2V3) and the approximately renormalized, non-Dyson, linear, third-order method (nD-L3+, 0.1, OV4). The Brueckner doubles with triple field operators (BD-T1) nondiagonal electron-propagator method provides such close agreement with coupled-cluster single, double, and perturbative triple replacement total energy differences that it may be used as an alternative means of obtaining standard data. The new methods with diagonal self-energy matrices are the foundation of a composite procedure for estimating basis-set effects. This model produces accurate predictions and clear interpretations based on Dyson orbitals for the photoelectron spectra of the nucleotides found in DNA.
Collapse
Affiliation(s)
- Ernest Opoku
- Department of Chemistry and Biochemistry, Auburn University, Auburn, Alabama 36849-5312, United States
| | - Filip Pawłowski
- Department of Chemistry and Biochemistry, Auburn University, Auburn, Alabama 36849-5312, United States
| | - J V Ortiz
- Department of Chemistry and Biochemistry, Auburn University, Auburn, Alabama 36849-5312, United States
| |
Collapse
|
2
|
Cyraniak A, Faron D, Freza S, Anusiewicz I, Skurski P. Superhalogen Anions Supported by the Systems Comprising Alternately Aligned Boron and Nitrogen Central Atoms. Front Chem 2022; 10:863408. [PMID: 35529695 PMCID: PMC9068874 DOI: 10.3389/fchem.2022.863408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 04/07/2022] [Indexed: 11/13/2022] Open
Abstract
Using DFT/(B3LYP/wB97XD/B2PLYPD) and OVGF electronic structure methods with flexible atomic orbital basis sets, we examined the series of polynuclear superhalogen anions matching the (BF3(BN) n F4n+1)- formula (for n = 1-10,13,18-20) containing alternately aligned boron and nitrogen central atoms decorated with fluorine ligands. It was found that the equilibrium structures of these anions correspond to fully extended chains (with each B and N central atom surrounded by four substituents arranged in a tetrahedral manner) and thus mimic the globally stable fully extended (all-trans) conformations of higher n-alkanes. The vertical electron detachment energies of the (BF3(BN) n F4n+1)- anions were found to exceed 8 eV in all cases and gradually increase with the increasing number of n. The approximate limiting value of vertical electron binding energy that could be achieved for such polynuclear superhalogen anions was estimated as equal to ca. 10.7 eV.
Collapse
Affiliation(s)
- Adrianna Cyraniak
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, Poland
| | - Dawid Faron
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, Poland
| | - Sylwia Freza
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, Poland
| | - Iwona Anusiewicz
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, Poland
| | - Piotr Skurski
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Gdańsk, Poland
| |
Collapse
|
3
|
Tripodal Podand Ligand with a Superhalogen Nature as an Effective Molecular Trap. Symmetry (Basel) 2020. [DOI: 10.3390/sym12091441] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Tris(2-methoxyethyl) fluoroborate anion (TMEFA), anovel tripodal ligand based on the BF4− superhalogen anion, is proposed and was investigated theoretically using ab initio MP2 (second-order Møller-Plesset perturbational method) and OVGF (outer valence Green function) methods. The studied molecule comprises three 2-methoxyethoxy groups (-O-CH2-CH2-O-CH3) connected to a central boron atom, which results in the C3-symmetry of the compound. The resulting anion was stable against fragmentation processes and its vertical electron detachment energy was found to be 5.72 eV. Due to its equilibrium structure resembling that of classical tripodal podands, the [F-B(O-CH2-CH2-O-CH3)3]− anion is capable of binding metal cations using its three arms, and thus may form strongly bound ionic complexes such as [F-B(O-CH2-CH2-O-CH3)3]−/Li+ and [F-B(O-CH2-CH2-O-CH3)3]−/Mg2+. The binding energies predicted for such compounds far exceed those of the similar neutral classical podand ligands, which likely makes the [F-B(O-CH2-CH2-O-CH3)3]− system a more effective molecular trap or steric shielding agent with respect to selected metal cations.
Collapse
|
4
|
Brzeski J, Czapla M, Skurski P. Icosahedral Carborane Superacids and their Conjugate Bases Comprising H, F, Cl, and CN Substituents: A Theoretical Investigation of Monomeric and Dimeric Cages. Chempluschem 2020; 85:312-318. [PMID: 32031331 DOI: 10.1002/cplu.202000007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2019] [Revised: 01/29/2020] [Indexed: 11/08/2022]
Abstract
Theoretical investigation of the H(CHB11 X11 ) (X=H, F, Cl, CN), H(CHB11 Xn Y11-n ) (X,Y=F, Cl; n=1,5), and dimeric (H(CHB11 X11 ))2 (X=F, Cl) carborane superacids performed at the B3LYP/6-311++G(d,p) theory level revealed the similarity of their equilibrium structures and the possibility of nearly barrierless hydrogen atom migration among the substituents attached to one side of the icosahedral CB11 cage. The vertical electron detachment energies predicted at the OVGF/6-311++G(3df,2pd) theory level for the conjugate bases (CHB11 X11 )- were found to span the 5.82-9.00 ev range. The acid strengths (manifested by the Gibbs free deprotonation energies spanning the 213-266 kcal/mol range) predicted for the icosahedral H(CHB11 X11 ) carborane systems confirm their superacidic properties which might be increased even further by the attachment of the second carborane H(CHB11 X11 ) unit that leads to a dimeric structure mimicking a part of an experimentally observed H-bridged polymeric chain. The Gibbs free deprotonation energy of the dimeric (H(CHB11 Cl11 ))2 acid was predicted to be smaller by 17 kcal/mol than that of the corresponding monomeric H(CHB11 Cl11 ) acid.
Collapse
Affiliation(s)
- Jakub Brzeski
- Laboratory of Quantum Chemistry Department of Theoretical Chemistry Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308, Gdańsk, Poland
| | - Marcin Czapla
- Laboratory of Quantum Chemistry Department of Theoretical Chemistry Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308, Gdańsk, Poland
| | - Piotr Skurski
- Laboratory of Quantum Chemistry Department of Theoretical Chemistry Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308, Gdańsk, Poland
| |
Collapse
|
5
|
Sikorska C. Magnesium-Based Clusters as Building Blocks of Electrolytes in Lithium-Ion Batteries. Chemphyschem 2019; 20:2236-2246. [PMID: 31309658 DOI: 10.1002/cphc.201900318] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2019] [Revised: 05/30/2019] [Indexed: 11/06/2022]
Abstract
Superhalogens, owing to their large electron affinity (EA, exceeding those of any halogen atom), play an essential role in physical chemistry as well as new material design. They have applications in hydrogen storage and lithium-ion batteries. Owing to the unique geometries and electronic features of magnesium-based clusters, their potential to form a new class of lithium salts has been investigated here theoretically. The idea is assessed by conducting ab initio computations on Li+ /Mgn F2n+1-2m Om - compounds (n=2, 3; m=0-3) and analyzing their performance as potential Li-ion battery electrolytes. The Mg3 F7 - cluster, with large electron binding energy (EA of 7.93 eV), has been proven to serve as a building block for lithium salts. It is shown that, apart from high electronic stability, the new superhalogen-based electrolytes exhibit a set of desirable properties, including a large band gap, high electrolyte stability window, easy mobility of the Li+ , and favorable insensitivity to water.
Collapse
Affiliation(s)
- Celina Sikorska
- Laboratory of Molecular Modeling Department of Theoretical Chemistry Faculty of Chemistry, University of Gdansk Wita Stwosza 63, 80-308, Gdansk, Poland.,MacDiarmid Institute for Advanced Materials and Nanotechnology Department of Physics, The University of Auckland, 38 Princes Street, Auckland, 1010, New Zealand
| |
Collapse
|
6
|
Bian S, Ma Y, Shi Y, Fan X, Kong X. Superhalogen Species of Titanium Oxide Related Clusters Generated by Laser Ablation. J Phys Chem A 2019; 123:6787-6791. [DOI: 10.1021/acs.jpca.9b06282] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
7
|
Reddy GN, Parida R, Jena P, Jana M, Giri S. Superhalogens as Building Blocks of Super Lewis Acids. Chemphyschem 2019; 20:1607-1612. [PMID: 30989750 DOI: 10.1002/cphc.201900267] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Revised: 04/12/2019] [Indexed: 11/07/2022]
Abstract
Lewis acids play an important role in synthetic chemistry. Using first-principle calculations on some newly designed molecules containing boron and organic heterocyclic superhalogen ligands, we show that the acid strength depends on the charge of the central atom as well as on the ligands attached to it. In particular, the strength of the Lewis acid increases with increasing electron withdrawing power of the ligand. With this insight, we highlight the importance of superhalogen-based ligands in the design of strong Lewis acids. Calculated fluoride ion affinity (FIA) values of B[C2 BNO(CN)3 ]3 and B[C2 BNS(CN)3 ]3 show that these are super Lewis acids.
Collapse
Affiliation(s)
- G Naaresh Reddy
- Department of Chemistry, National Institute of Technology Rourkela, Odisha, 769008, India
| | - Rakesh Parida
- Department of Chemistry, National Institute of Technology Rourkela, Odisha, 769008, India
| | - Puru Jena
- Department of Physics, Virginia Commonwealth Unoiversity, Richmond, VA, USA
| | - Madhurima Jana
- Department of Chemistry, National Institute of Technology Rourkela, Odisha, 769008, India
| | - Santanab Giri
- School of Applied Sciences and Humanities Haldia Institute of Technology, ICARE Complex, West Bengal, 721657, India
| |
Collapse
|
8
|
Cyraniak A, Skurski P, Czapla M. The presence of two different central atoms increases the strength of Lewis-Brønsted superacids. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.01.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
9
|
Brzeski J, Skurski P. The acid strength of the HF/AlX3 Lewis-Brønsted complexes involving various electron acceptors as ligands. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2018.12.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|
10
|
Czapla M, Ciepła O, Brzeski J, Skurski P. Formation of Enormously Strongly Bound Anionic Clusters Predicted in Binary Superacids. J Phys Chem A 2018; 122:8539-8548. [DOI: 10.1021/acs.jpca.8b07514] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Marcin Czapla
- Laboratory of Quantum Chemistry, Department of Theoretical Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
| | - Olimpia Ciepła
- Laboratory of Quantum Chemistry, Department of Theoretical Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
| | - Jakub Brzeski
- Laboratory of Quantum Chemistry, Department of Theoretical Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
| | - Piotr Skurski
- Laboratory of Quantum Chemistry, Department of Theoretical Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
| |
Collapse
|
11
|
Czapla M, Simons J, Skurski P. Dissociative electron attachment to HGaF 4 Lewis-Brønsted superacid. Phys Chem Chem Phys 2018; 20:21739-21745. [PMID: 30105336 DOI: 10.1039/c8cp04007a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The consequences of an excess electron attachment to HGaF4 (HF/GaF3) superacid are investigated on the basis of theoretical calculations employing ab initio methods. It is found that the dipole potential of HGaF4 plays an important role in the initial formation of a dipole-bound anionic state. Due to the kinetic instability of that initially formed anion, a fragmentation reaction occurs promptly and leads to (GaF4)- and H as the final products. The energy profile of this process, its rate, and mechanism are presented and discussed.
Collapse
Affiliation(s)
- Marcin Czapla
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, Gdańsk 80-308, Poland.
| | | | | |
Collapse
|
12
|
Rybacka O, Brzeski J, Anusiewicz I, Skurski P. The acid strength of the datively bound complexes involving AlF3 lone pair acceptor and various lone pair donors. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2018.06.059] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|