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Abdelaziz B, Chérif I, Gassoumi B, Patanè S, Ayachi S. Linear and Nonlinear Optical Responses of Nitrobenzofurazan-Sulfide Derivatives: DFT-QTAIM Investigation on Twisted Intramolecular Charge Transfer. J Phys Chem A 2023; 127:9895-9910. [PMID: 37972307 PMCID: PMC10694821 DOI: 10.1021/acs.jpca.3c04277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 10/07/2023] [Accepted: 11/01/2023] [Indexed: 11/19/2023]
Abstract
In this study, we report on the green fluorescence exhibited by nitrobenzofurazan-sulfide derivatives (NBD-Si, i = 1-4). The optical responses of these studied compounds in a polar methanol solvent were simulated by the use of time-dependent density functional theory (TD-DFT) employing the Becke-3-Parameter-Lee-Yang-Parr (B3LYP) functional along with the 6-31G(d,p) basis set. The computed energy and oscillator strength (f) results complement the experimental results. The band gap was calculated as the difference between the lowest unoccupied molecular orbital (LUMO) and the highest occupied molecular orbital (HOMO). Additionally, the density of states (DOS) was computed, providing a comprehensive understanding of the fundamental properties of these materials and further corroborating the experimental data. When the experimental data derived from ultraviolet/visible (UV/visible) and fluorescence spectroscopic techniques and those from simulated spectra are analyzed, the extracted values match up adequately. In addition, the NBD-sulfide compounds exhibit a large Stokes shift up to 85 nm in a polar methanol solvent. They are hypothesized to represent a novel paradigm of excited-state intramolecular charge transfer (ICT). To understand the intrinsic optical properties of NBD-Si materials, an ICT was identified, and its direction within the molecule was evaluated using the ratio of βvect and βtotal, values extracted from the computed nonlinear optical (NLO) properties. Moreover, the reduced density gradient (RDG)-based noncovalent interactions (NCIs) were employed to characterize the strength and type of NBD-Si interactions. Furthermore, noncovalent interactions were identified and categorized using the Quantum Theory of Atoms in Molecules (QTAIM) analysis. Ultimately, the combination of Hirshfeld surface analysis and DFT calculations was utilized to enhance the characterization and rationalization of these NCIs.
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Affiliation(s)
- Balkis Abdelaziz
- Laboratory
of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, University of Monastir, Avenue of the Environment, 5019 Monastir, Tunisia
- Department
of Mathematical and Computer Sciences, Physical Sciences and Earth
Sciences, University of Messina, I-98166 Messina, Italy
| | - Imen Chérif
- Laboratory
of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, University of Monastir, Avenue of the Environment, 5019 Monastir, Tunisia
| | - Bouzid Gassoumi
- Laboratoire
Interfaces et Matériaux Avancés (LIMA), Faculté
des Sciences, Université de Monastir, Avenue de l’Environnement, 5019 Monastir, Tunisia
| | - Salvatore Patanè
- Department
of Mathematical and Computer Sciences, Physical Sciences and Earth
Sciences, University of Messina, I-98166 Messina, Italy
| | - Sahbi Ayachi
- Laboratory
of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, University of Monastir, Avenue of the Environment, 5019 Monastir, Tunisia
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Azaid A, Abram T, Alaqarbeh M, Raftani M, Kacimi R, Sbai A, Lakhlifi T, Bouachrine M. Design new organic material based on triphenylamine (TPA) with D-π-A-π-D structure used as an electron donor for organic solar cells: A DFT approach. J Mol Graph Model 2023; 122:108470. [PMID: 37116334 DOI: 10.1016/j.jmgm.2023.108470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 03/29/2023] [Accepted: 04/02/2023] [Indexed: 04/30/2023]
Abstract
Because of the increasing scarcity of fossil fuels and the growing need for energy, it has become necessary to research new renewable energy resources. In this study, five new high-performance materials (TP-FA1F-TP - TP-FA5F-TP) of the D-π-A-π-D configuration based on triphenylamine (TPA) were theoretically investigated by applying DFT and TD-DFT methods for future application as heterojunction organic solar cells (BHJ). The influence of the modification of the acceptor (A) of the parent molecule TP-FTzF-TP on the structural, electronic, photovoltaic and optical properties of the TP-FA1F-TP - TP-FA5F-TP organic molecules was investigated in detail. TP-FA1F-TP - TP-FA5F-TP showed Egap in the interval of 1.44-2.01 eV with λabs in the range of 536-774 nm, open-circuit voltage (Voc) values varied between 0.3 and 0.56 V and power conversion efficiencies (PCE) ranging from (3-6) %. Our results also show that the donor molecules suggested in this research exhibit an improved performance compared to the recently synthesized TP-FTzF-TP, such as a lowest HOMO energy, a smaller Egap, and a greater absorption spectrum, and can lead to higher performance. Indeed, this theoretical research could lead to the future synthesis of better compounds as active substances used in BHJ.
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Affiliation(s)
- Ahmed Azaid
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco
| | - Tayeb Abram
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco
| | - Marwa Alaqarbeh
- National Agricultural Research Center, Al-Baqa, 19381, Jordan.
| | - Marzouk Raftani
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco
| | - Rchid Kacimi
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco
| | - Abdelouahid Sbai
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco
| | - Tahar Lakhlifi
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco
| | - Mohammed Bouachrine
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Sciences, University Moulay Ismail, Meknes, Morocco; EST Khenifra, University Sultan Moulay Sliman, Morocco.
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3
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UZUN S, DEMİRCİOĞLU Z, KOÇ E, CEYLAN M. Synthesis, Crystal structure, Theoretical Chemical Activitiy, Electrophilicity-Based Charge Transfer (ECT) with DNA bases and Molecular Docking Studies of 2-amino-4-(2,4-dimethoxyphenyl)-5,6-dihydrobenzo[H]quinoline-3-carbonitrile. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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4
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Azaid A, Raftani M, Alaqarbeh M, Kacimi R, Abram T, Khaddam Y, Nebbach D, Sbai A, Lakhlifi T, Bouachrine M. New organic dye-sensitized solar cells based on the D-A-π-A structure for efficient DSSCs: DFT/TD-DFT investigations. RSC Adv 2022; 12:30626-30638. [PMID: 36337973 PMCID: PMC9597288 DOI: 10.1039/d2ra05297k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 10/10/2022] [Indexed: 11/16/2022] Open
Abstract
Global energy consumption has increased due to population growth and economic development. Solar energy is one of the most important renewable energy sources for human consumption. In this research, four novel organic dyes (D2-D5) of the D-A-π-A structure based on triphenylamine (TPA) were studied theoretically using DFT and TD-DFT techniques for future usage as dye-sensitized solar cells (DSSCs). The effects of modifying the π-spacer of the reference molecule D1 on the structural, electronic, photovoltaic, and optical characteristics of the D2-D5 dyes were studied in detail. D2-D5 exhibited band gaps (E gap) in the range from 1.89 to 2.10 eV with λ abs in the range of 508 to 563 nm. The results obtained show that modifying the π-spacer of the dye D1 increased its hole injection and reinforced the intramolecular charge-transfer (ICT) impact, which resulted in a red-shifted ICT absorption with a greater molar extinction coefficient. The theoretically calculated open-circuit voltage (V oc) values ranged from 0.69 to 1.06 eV, while the light-harvesting efficiency (LHE) values varied from 0.95 to 0.99. Indeed, this theoretical research could guide chemists to synthesize effective dyes for DSSCs.
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Affiliation(s)
- Ahmed Azaid
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Marzouk Raftani
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | | | - Rchid Kacimi
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Tayeb Abram
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Youness Khaddam
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Diae Nebbach
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Abdelouahid Sbai
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Tahar Lakhlifi
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco
| | - Mohammed Bouachrine
- Molecular Chemistry and Natural Substances Laboratory, Faculty of Science, University Moulay IsmailMeknesMorocco,Superior School of Technology – Khenifra (EST-Khenifra), University of Sultan My SlimanePB 170Khenifra 54000Morocco
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5
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Feride Akman, Kazachenko AS, Issaoui N. DFT Calculations of Some Important Radicals Used in the Nitroxide-Mediated Polymerization and Their HOMO‒LUMO, Natural Bond Orbital, and Molecular Electrostatic Potential Comparative Analysis. POLYMER SCIENCE SERIES B 2022. [DOI: 10.1134/s156009042270035x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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6
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Feride Akman, Kazachenko AS, Issaoui N. DFT Calculations of Some Important Radicals Used in the Nitroxide-Mediated Polymerization and Their HOMO‒LUMO, Natural Bond Orbital, and Molecular Electrostatic Potential Comparative Analysis. POLYMER SCIENCE SERIES B 2022. [DOI: doi.org/10.1134/s156009042270035x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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7
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Nebbach D, Agda F, Kaya S, Siddique F, Lakhlifi T, Aziz Ajana M, Bouachrine M. Non-fullerene acceptor IDIC based on indacinodithiophene used as an electron donor for organic solar cells: A computational study. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2021.118289] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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8
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Shang C, Wang L, Cao Y, Yu X, Li Y, Sun C, Cui J. Is it possible to switch ESIPT-channel of hydroxyanthraquinones with the strategy of modifying electronic groups? J Mol Liq 2022. [DOI: 10.1016/j.molliq.2021.118343] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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9
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Yağcı NK, Kansız S, Özcandan E. Synthesis, crystal structure, DFT studies, Hirshfeld surface analysis and drug delivery performance of bis(2-chloro-4,6-diaminopyrimidine)copper(II)-dichloride. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.131142] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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10
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Mansouri G, Ghobadi M, Notash B. Synthesis, spectroscopic, structural, DFT and antibacterial studies of cyclometalated rhodium(III) complex based on morpholinedithiocarbamate ligand. INORG CHEM COMMUN 2021. [DOI: 10.1016/j.inoche.2021.108707] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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11
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Darugar V, Vakili M, Tayyari SF, Hansen PE, Kamounah FS. Molecular structure, intramolecular hydrogen bond strength, vibrational assignment, and spectroscopic insight of 4-phenylamino-3-penten-2-one and its derivatives: A theoretical and experimental study. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.116035] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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12
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Experimental and theoretical approach: Local and global chemical activity, charge transfer method with DNA bases, spectroscopic, structural and electronic properties of (E)-2-(((4-fluorophenyl)imino)methyl)-4-methoxyphenol. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127451] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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Bourass M, Bouachrine M. Étude structurale des systèmes dissymétriques de structure D-π-A à base de thiénopyrazine destinés aux cellules solaires organiques de type « bulk heterojunction » (BHJ). CAN J CHEM 2019. [DOI: 10.1139/cjc-2019-0053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Onze nouvelles molécules organiques de structure donneurs-espaceur-accepteurs (D-π-A) utilisées pour les cellules solaires organiques (OSC) basées sur la thiénopyrazine et le thiophène ont été étudiées par la théorie de la densité fonctionnelle (DFT) et la théorie de la densité fonctionnelle dépendante de temps DFT (TD-DFT), pour expliquer comment l’ordre de conjugaison influe sur les performances des cellules solaires. Le groupe accepteur d’électrons (ancrage) était composé de 2-cyanoacrylique pour tous les composés, tandis que l’unité donneuse d’électrons était variée et que son influence fut étudiée. Les résultats théoriques ont montré que les calculs TD-DFT, avec une fonction hybride d’échange – corrélation utilisant la méthode d’atténuation de Coulomb (CAM-B3LYP) en conjonction avec un modèle de solvatation à cycle continu polarisable (modèle de continuum polarisable, PCM) combinée avec la base 6-31G(d,p), était raisonnablement capable de prédire les énergies d’excitation, les spectres d’absorption et d’émission des molécules étudiées. Les niveaux d’énergie des orbitales moléculaires frontières (orbitale moléculaire occupée de plus haute énergie (HOMO) et orbitale moléculaire inoccupée de plus basse énergie (LUMO) de ces composés peuvent avoir un effet positif sur le processus d’injection et de régénération d’électrons. La tendance des lacunes calculées HOMO-LUMO se compare bien avec les données spectrales. En outre, les valeurs estimées de photovoltage en circuit ouvert (Voc) pour ces composés ont été présentées. L’étude des propriétés structurelles, électroniques et optiques de ces composés pourrait aider à concevoir des matériaux organiques photovoltaïques fonctionnels plus efficaces.
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Affiliation(s)
- Mohamed Bourass
- MCNS Laboratoire, Faculté des Sciences, Université Moulay Ismail, Meknes, Maroc
| | - Mohammed Bouachrine
- MCNS Laboratoire, Faculté des Sciences, Université Moulay Ismail, Meknes, Maroc
- ESTM, (LASMAR), Université Moulay Ismail, Meknes, Maroc
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14
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Spectroscopic, XRD, Hirshfeld surface and DFT approach (chemical activity, ECT, NBO, FFA, NLO, MEP, NPA& MPA) of (E)-4-bromo-2-[(4-bromophenylimino)methyl]-6-ethoxyphenol. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.03.060] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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15
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Structural studies of 3-[(E)-[(2E)-2-methyl-3-phenylprop-2-en-1-ylidene] amino]-1-phenylthiourea: Combined experimental and computational studies. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.04.062] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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16
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Bourass M, El Alamy A, Bouachrine M. Structural and photophysical studies of triphenylamine-based nonlinear optical dyes: effects of π-linker moieties on the D-π-A structure. CR CHIM 2019. [DOI: 10.1016/j.crci.2019.05.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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17
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P.R. KR, Mary Y, Fernandez A, S AP, Mary Y, Thomas R. Single crystal XRD, DFT investigations and molecular docking study of 2- ((1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)amino)naphthalene-1,4-dione as a potential anti- cancer lead molecule. Comput Biol Chem 2019; 78:153-164. [DOI: 10.1016/j.compbiolchem.2018.11.022] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Revised: 11/18/2018] [Accepted: 11/25/2018] [Indexed: 12/29/2022]
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18
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Khojasteh V, Kakanejadifard A, Zabardasti A, Azarbani F. Spectral, structural, solvatochromism, biological and computational investigation of some new azo–azomethines containing N-alkylpyridinium salts. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.08.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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19
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Bourass M, Komiha N, Kabbaj OK, Wazzan N, Chemek M, Bouachrine M. The photophysical properties and electronic structures of bis[1]benzothieno[6,7-d:6′,7′-d′]benzo[1,2-b:4,5-b′]dithiophene (BBTBDT) derivatives as hole-transporting materials for organic light-emitting diodes (OLEDs). NEW J CHEM 2019. [DOI: 10.1039/c9nj02756d] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The compounds with the D–π–A structure are found to be good candidates for blue-emitting materials.
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Affiliation(s)
- Mohamed Bourass
- Université de Bordeaux
- Institut des Sciences Moléculaires
- ISM UMR 5255 CNRS
- Talence Cédex
- France
| | - Najia Komiha
- CERNE2D: Laboratory of Spectroscopy
- Molecular Modeling, Materials, Nanomaterials, Water and Environment (LS3MN2E)
- Faculty of Sciences
- University Mohammed V
- Rabat
| | - Oum Keltoum Kabbaj
- CERNE2D: Laboratory of Spectroscopy
- Molecular Modeling, Materials, Nanomaterials, Water and Environment (LS3MN2E)
- Faculty of Sciences
- University Mohammed V
- Rabat
| | - Nuha Wazzan
- King Abdulaziz University
- Chemistry Department
- Faculty of Science
- Jeddah 21589
- Saudi Arabia
| | - Mourad Chemek
- Université de Monastir
- LR: Synthèse asymétrique et ingénierie moléculaire de matériaux organiques pour l’électronique organique
- Faculté des Sciences de Monastir
- Monastir
- Tunisia
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20
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Molecular structure, Hirshfeld surface analysis, spectroscopic (FT-IR, Laser-Raman, UV–vis. and NMR), HOMO-LUMO and NBO investigations on N-(12-amino-9,10-dihydro-9,10-ethanoanthracen-11-yl)-4-methylbenzenesulfonamide. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.06.038] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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21
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Gökce H, Öztürk N, Sert Y, El-Azab AS, A. AlSaif N, Abdel-Aziz AAM. 4-[(1, 3-Dioxoisoindolin-2-yl)methyl]benzenesulfonamide: Full Structural and Spectroscopic Characterization and Molecular Docking with Carbonic Anhydrase II. ChemistrySelect 2018. [DOI: 10.1002/slct.201802484] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Halil Gökce
- Vocational School of Health Services; Giresun University; 28200 Giresun Turkey
| | - Nuri Öztürk
- Dereli Vocational School; Giresun University; 28950 Giresun Turkey
| | - Yusuf Sert
- Sorgun Vocational School; Bozok University; 66100 Yozgat Turkey
| | - Adel S. El-Azab
- Department of Pharmaceutical Chemistry; College of Pharmacy; King Saud University; 11451 Riyadh Saudi Arabia
- Department of Organic Chemistry; Faculty of Pharmacy; Al-Azhar University; 11884 Cairo Egypt
| | - Nawaf A. AlSaif
- Department of Pharmaceutical Chemistry; College of Pharmacy; King Saud University; 11451 Riyadh Saudi Arabia
| | - Alaa A.-M. Abdel-Aziz
- Department of Pharmaceutical Chemistry; College of Pharmacy; King Saud University; 11451 Riyadh Saudi Arabia
- Department of Medicinal Chemistry; Faculty of Pharmacy; Mansoura University; 35516 Mansoura Egypt
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22
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Bakić MT, Nuskol M, Mikac L. Structural and Spectroscopic Properties of 2-Bromoacetylnaphthalene: Experimental and Computational (DFT) Analysis. ChemistrySelect 2018. [DOI: 10.1002/slct.201800282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Marina Tranfić Bakić
- University of Zagreb, Faculty of Food Technology and Biotechnology; Department of Chemistry and Biochemistry; Pierottijeva 6 10000 Zagreb Croatia
| | - Marko Nuskol
- University of Zagreb, Faculty of Food Technology and Biotechnology; Department of Chemistry and Biochemistry; Pierottijeva 6 10000 Zagreb Croatia
| | - Lara Mikac
- Ruđer Bošković Institute; Center of Excellence for Advanced Materials and Sensing Devices; Bijenička cesta 54 10000 Zagreb Croatia
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23
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Kuppuswamy S, Wofford JD, Joseph C, Xie ZL, Ali AK, Lynch VM, Lindahl PA, Rose MJ. Structures, Interconversions, and Spectroscopy of Iron Carbonyl Clusters with an Interstitial Carbide: Localized Metal Center Reduction by Overall Cluster Oxidation. Inorg Chem 2017; 56:5998-6012. [PMID: 28441025 DOI: 10.1021/acs.inorgchem.7b00741] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The syntheses, interconversions, and spectroscopic properties of a set of iron carbonyl clusters containing an interstitial carbide are reported. This includes the low temperature X-ray structures of the six-iron clusters (Y)2[Fe6(μ6-C)(μ2-CO)4(CO)12] (1a-c; where Y = NMe4, NEt4, PPh4); the five-iron cluster [Fe5(μ5-C)(CO)15] (3); and the novel formulation of the five-iron cluster (NMe4)2[Fe5(μ5-C)(μ2-CO)(CO)13] (4). Also included in this set is the novel charge-neutral cluster, [Fe6(μ6-C)(CO)18] (2), for which we were unable to obtain a crystallographic structure. As synthetic proof for the identity of 2, we performed a closed loop of interconversions within a family of crystallographically defined species (1, 3, and 4): [Fe6]2- → [Fe6]0 → [Fe5]0 → [Fe5]2- → [Fe6]2-. The structural, spectroscopic, and electronic properties of this "missing link" cluster 2 were investigated by IR, Raman, XPS, and Mössbauer spectroscopies-as well as by DFT calculations. A single νCO feature (1965 cm-1) in the IR spectrum of 2, as well as a prominent Raman feature (νsymm = 1550 cm-1), are consistent with the presence of terminal carbonyls and a {(μ6-C)Fe6} arrangement of iron centers around the central carbide. The XPS of 2 exhibits a higher energy Fe 2p3/2 feature (707.4 eV) as compared to that of 1 (705.5 eV), consistent with the two-electron oxidation induced by treatment of 1 with two equivalents of [Fc](PF6) under CO atmosphere (for the two added CO ligands). DFT calculations indicate two axial and four equatorial Fe sites in 1, all of which have the same or similar oxidation states, for example, two Fe(0) and four Fe(+0.5). These assignments are supported by Mössbauer spectra for 1, which exhibit two closely spaced quadrupole doublets with δ = 0.076 and 0.064 mm s-1. The high-field Mössbauer spectrum of 2 (4.2 K) exhibits three prominent quadrupole doublets with δ = -0.18, -0.11, and +0.41 mm s-1. This indicates three pairs of chemically equivalent Fe sites. The first two pairs arise from irons of a similar oxidation state, while the last pair arises from irons in a different oxidation state, indicating a mixed-valent cluster. Variable field Mössbauer spectra for 2 were simulated assuming these two groups and a diamagnetic ground state. Taken together, the Mössbauer results and DFT calculations for 2 indicate two axial Fe(II) sites and four equatorial sites of lower valence, probably Fe(0). In the DFT optimized pentagonal bipyramidal structure for 2, the Fe(II)-Ccarbide distances are compressed (∼1.84 Å), while the Fe(0)-Ccarbide distances are elongated (∼2.05 Å). Analysis of the formulations for 1 (closo-square bipyramid) and 2 (nido-pentagonal bipyramid) is considered in the context of the textbook electron-counting rules of 14n+2 and 14n+4 for closo and nido clusters, respectively. This redox-dependent intracluster disproportionation of Fe oxidation states is concluded to arise from changes in bonding to the central carbide. A similar phenomenon may be promoted by the central carbide of the FeMoco cluster of nitrogenase, which may in turn stimulate N2 reduction.
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Affiliation(s)
- Subramaniam Kuppuswamy
- Department of Chemistry, The University of Texas at Austin , Austin, Texas 78712, United States
| | - Joshua D Wofford
- Department of Chemistry, Texas A&M University , College Station, Texas 77840, United States
| | - Chris Joseph
- Department of Chemistry, The University of Texas at Austin , Austin, Texas 78712, United States
| | - Zhu-Lin Xie
- Department of Chemistry, The University of Texas at Austin , Austin, Texas 78712, United States
| | - Azim K Ali
- Department of Chemistry, The University of Texas at Austin , Austin, Texas 78712, United States
| | - Vincent M Lynch
- Department of Chemistry, The University of Texas at Austin , Austin, Texas 78712, United States
| | - Paul A Lindahl
- Department of Chemistry, Texas A&M University , College Station, Texas 77840, United States
| | - Michael J Rose
- Department of Chemistry, The University of Texas at Austin , Austin, Texas 78712, United States
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Ünver H, Boyacıoğlu B, Zeyrek CT, Yıldız M, Demir N, Yıldırım N, Karaosmanoğlu O, Sivas H, Elmalı A. Synthesis, spectral and quantum chemical studies and use of ( E )-3-[(3,5-bis(trifluoromethyl)phenylimino)methyl]benzene-1,2-diol and its Ni(II) and Cu(II) complexes as an anion sensor, DNA binding, DNA cleavage, anti-microbial, anti-mutagenic and anti-cancer agent. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.06.058] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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25
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Crystal structure, spectroscopic investigations and quantum chemical calculation studies of (3aR,6S,7aR)-7a-bromo-6-methyl-2-[(4-methylphenyl)sulfonyl]-1,2,3,6,7,7a-hexahydro-3a,6-epoxyisoindole: A combined experimental and theoretical studies. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.06.039] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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26
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Durgun M, Ceylan Ü, Yalçın ŞP, Türkmen H, Özdemir N, Koyuncu İ. Synthesis, molecular structure, spectroscopic characterization, NBO, NLO and NPA analysis and in vitro cytotoxicity study of 3-chloro-N-(4-sulfamoylphenethyl)propanamide with experimental and computational study. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.02.062] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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27
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Ceylan Ü, Tarı GÖ, Gökce H, Ağar E. Spectroscopic (FT–IR and UV–Vis) and theoretical (HF and DFT) investigation of 2-Ethyl-N-[(5-nitrothiophene-2-yl)methylidene]aniline. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.01.019] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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28
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Structural studies on some dithiophosphonato complexes of Ni(II), Cd(II), Hg(II) and theoretical studies on a dithiophosphonato Ni(II) complex using density functional theory. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.06.087] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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29
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Zeyrek CT, Koçak SB, Ünver H, Pektaş S, Başterzi NS, Çelik Ö. Molecular structure and density functional modelling studies of 2-[(E)-2-(4-hydroxyphenyl)ethyliminomethyl]phenol. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.07.068] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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30
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Yıldız M, Karpuz Ö, Zeyrek CT, Boyacıoğlu B, Dal H, Demir N, Yıldırım N, Ünver H. Synthesis, biological activity, DNA binding and anion sensors, molecular structure and quantum chemical studies of a novel bidentate Schiff base derived from 3,5-bis(triflouromethyl)aniline and salicylaldehyde. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.03.047] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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31
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Zeyrek CT, Alpaslan G, Alyar H, Yıldız M, Dilek N, Ünver H. Synthesis, molecular structure, spectroscopic and theoretical studies on E-2-ethoxy-4-[(4-ethoxyphenylimino)methyl]phenol. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.02.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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32
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Polat T, Yurdakul Ş. Quantum chemical and spectroscopic (FT-IR and FT-Raman) investigations of 3-methyl-3h-imidazole-4-carbaldehyde. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 133:683-696. [PMID: 24996210 DOI: 10.1016/j.saa.2014.05.039] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2014] [Revised: 05/02/2014] [Accepted: 05/09/2014] [Indexed: 06/03/2023]
Abstract
FT-IR and FT-Raman spectra of 3-methyl-3h-imidazole-4-carbaldehyde (3M3HI4C) were recorded in the region 4000-400cm(-1) and 3500-50cm(-1), respectively. Optimized geometric parameters, conformational equilibria, normal mode frequencies, and corresponding vibrational assignments of 3M3HI4C were theoretically examined by quantum chemical methods for the first time. All vibrational frequencies were assigned in detail with the help of total energy distribution (TEDs). The experimental wavenumbers were compared with the scaled vibrational frequencies determined by DFT/B3LYP method. The results showed that the B3LYP/6-311++G(d,p) method predicts vibrational frequencies and the structural parameters effectively. The most stable conformer of the title compound was determined. The total electron density and molecular electrostatic potential surfaces of the molecule were constructed by using B3LYP/6-311++G(d,p) method to display electrostatic potential (electron+nuclei) distribution. The electronic properties HOMO and LUMO energies were measured. The lower energy band was assigned to the HOMO→LUMO transition. Natural bond orbital analysis of title molecule has been performed to indicate the presence of intramolecular charge transfer. Energies, relative stabilities, and dipole moments of title molecule were also compared and analyzed in the gas phase and in solvents. Furthermore, solvent effects on the geometry and vibrational frequency of 3M3HI4C were studied theoretically at the DFT/B3LYP level in combination with the conductor polarizable continuum model (C-PCM).
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Affiliation(s)
- Turgay Polat
- Department of Physics, Faculty of Arts and Sciences, Kastamonu University, Kuzeykent, 37100 Kastamonu, Turkey.
| | - Şenay Yurdakul
- Department of Physics, Faculty of Science, Gazi University, Teknikokullar, 06500 Ankara, Turkey
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33
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Chidan Kumar CS, Fun HK, Parlak C, Rhyman L, Ramasami P, Tursun M, Chandraju S, Quah CK. Synthesis, molecular structure, FT-IR, Raman, XRD and theoretical investigations of (2E)-1-(5-chlorothiophen-2-yl)-3-(naphthalen-2-yl)prop-2-en-1-one. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 132:174-182. [PMID: 24858359 DOI: 10.1016/j.saa.2014.04.155] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2014] [Revised: 04/17/2014] [Accepted: 04/23/2014] [Indexed: 06/03/2023]
Abstract
A novel (2E)-1-(5-chlorothiophen-2-yl)-3-(naphthalen-2-yl)prop-2-en-1-one [C17H11ClOS] compound has been synthesized and its structure has been characterized by FT-IR, Raman and single-crystal X-ray diffraction techniques. The isomers, optimized geometrical parameters, normal mode frequencies and corresponding vibrational assignments of the compound have been examined by means of the density functional theory method, employing, the Becke-3-Lee-Yang-Parr functional and the 6-311+G(3df,p) basis set. Reliable vibrational assignments and molecular orbitals have been investigated by the potential energy distribution and natural bonding orbital analyses, respectively. The compound crystallizes in the monoclinic space group P2₁/c with the unit cell parameters a=5.7827(8)Å, b=14.590(2)Å, c=16.138(2)Å and β=89.987 (°). The CC bond of the central enone group adopts an E configuration. There is a good agreement between the theoretically predicted structural parameters and vibrational frequencies and those obtained experimentally.
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Affiliation(s)
| | - Hoong Kun Fun
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia; Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia
| | - Cemal Parlak
- Department of Physics, Dumlupinar University, Kütahya 43100, Turkey
| | - Lydia Rhyman
- Computational Chemistry Group, Department of Chemistry, Faculty of Science, University of Mauritius, Réduit, Mauritius
| | - Ponnadurai Ramasami
- Computational Chemistry Group, Department of Chemistry, Faculty of Science, University of Mauritius, Réduit, Mauritius.
| | - Mahir Tursun
- Department of Physics, Dumlupinar University, Kütahya 43100, Turkey
| | - Siddegowda Chandraju
- Department of Sugar Technology and Chemistry, Sir M. Visvesvaraya PG Center, University of Mysore, Tubinakere, Mandya 571402, India
| | - Ching Kheng Quah
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
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34
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Tamer Ö, Dege N, Demirtaş G, Avcı D, Atalay Y, Macit M, Şahin S. Crystal structure and spectroscopic characterization of (E)-2-(((4-bromo-2-(trifluoromethoxy)phenyl)imino)methyl)-4-nitrophenol: A combined experimental and computational study. J Mol Struct 2014. [DOI: 10.1016/j.molstruc.2014.01.079] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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35
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Tamer Ö, Dege N, Demirtaş G, Avcı D, Atalay Y, Macit M, Ağar AA. An experimental and theoretical study on the novel (Z)-1-((naphthalen-2-ylamino)methylene)naphthalen-2(1H)-one crystal. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 117:13-23. [PMID: 23978793 DOI: 10.1016/j.saa.2013.07.098] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2013] [Revised: 07/24/2013] [Accepted: 07/31/2013] [Indexed: 06/02/2023]
Abstract
A novel compound has been synthesized, and its structure has been characterized by IR, UV-vis, NMR and X-ray single-crystal determination techniques. The title compound crystallizes in the orthorhombic space group P212121 with a=6.2120(4)Å, b=10.8242(7)Å, c=22.3857(15)Å and Z=4. The crystal structure has intramolecular N-H···O hydrogen bond and C-H···Cg interaction. These hydrogen bonds and interactions are effective in crystal packing. The optimum molecular geometry, conformational analysis, normal mode wavenumbers, infrared and Raman intensities, corresponding vibrational assignments, chemical shift assignments, and thermo-dynamical parameters have been investigated with the help of Density Functional Theory (DFT). Detailed vibrational assignments have been made on the basis of potential energy distribution (PED). In order to understand the electronic transitions of the compound, time dependent DFT (TD-DFT) calculations were performed in gas phase. Also, the dipole moment, linear polarizabilities, anisotropy and first hyperpolarizabilities values have been computed.
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Affiliation(s)
- Ömer Tamer
- Sakarya University, Faculty of Arts and Sciences, Department of Physics, 54140 Sakarya, Turkey
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36
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Krishnakumar V, Mangaiarkkarasi K, Mathammal R, Prabavathi N, Surumbarkuzhali N. FTIR, FT-Raman and NMR studies on 2,6-dichlorotoluene and 2-chloro-6-fluorotoluene based on density functional theory. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2013; 112:429-439. [PMID: 23728077 DOI: 10.1016/j.saa.2013.04.037] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2012] [Revised: 04/01/2013] [Accepted: 04/10/2013] [Indexed: 06/02/2023]
Abstract
In the present work, we reported a combined experimental and theoretical study on molecular structure and vibrational analysis of 2,6-dichlorotoluene (DCT) and 2-chloro-6-fluorotoluene (CFT). FTIR and FT-Raman spectra of the title compounds in the solid phase are recorded in the region 4000-400 cm(-1) and 4000-50 cm(-1) respectively. The structural and spectroscopic data of the molecules in the ground state is calculated using Hartree-Fock (HF) and density functional methods (B3LYP) with 3-21 and 6-31G* basis sets. The DFT (B3LYP/31G*) calculations have been giving energies, optimized structures, harmonic vibrational frequencies, IR intensities and Raman activities. The study is extended to the HOMO-LUMO analysis to calculate the energy gap, ionization potential, electron affinity, global hardness, chemical potential and thermodynamic properties of DCT and CFT. A complete vibrational assignment aided by the theoretical harmonic frequency analysis has been proposed. The calculated HOMO and LUMO energies show the charge transfer occurs in the molecule. The harmonic vibrational frequencies have been compared experimental FTIR and FT-Raman spectra. The observed and calculated frequencies are found to be in good agreement. The complete vibrational assignments are performed on the basis of the Total Energy Distribution (TED) of the vibrational modes calculated with scaled quantum mechanical (SQM) method. (13)C NMR chemical shifts results are compared with the experimental values. The experimental spectra also coincide satisfactorily with those of theoretically constructed spectrograms.
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Affiliation(s)
- V Krishnakumar
- Department of Physics, Periyar University, Salem 636 011, India.
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37
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Yang Y, Gao H. Theoretical structure and vibrational spectra of ciprofloxacin: density functional theory study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2013; 102:134-141. [PMID: 23220528 DOI: 10.1016/j.saa.2012.10.029] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2012] [Revised: 10/16/2012] [Accepted: 10/17/2012] [Indexed: 06/01/2023]
Abstract
The molecular structure and vibrational spectra of ciprofloxacin(1-cyclopropyl-6-fluoro-1,4-dihydro-4-oxo-7-(1-piperazinyl)-3-quinolinecarboxylic acid) have been calculated using the different density functional theory (DFT) methods and various basis sets. This paper examines the comparative performance of different DFT methods at various basis sets in predicting molecular and vibrational spectra of ciprofloxacin. The calculation results show that SVWN/LANL2DZ level and SVWN/6-31G level offer the highest certainty to predict the structure and vibrational spectra of ciprofloxacin, respectively.
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Affiliation(s)
- Yue Yang
- Institute of Watershed Science and Environmental Ecology, Wenzhou Medical College, Zhejiang 325035, China
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38
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Yang Y, Gao H. Density functional theory study on the molecular structure and vibration spectra of fenbufen. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2013; 101:119-126. [PMID: 23099169 DOI: 10.1016/j.saa.2012.09.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2012] [Revised: 08/31/2012] [Accepted: 09/16/2012] [Indexed: 06/01/2023]
Abstract
This paper examines the comparative performance of different density functional theory (DFT) methods at various basis sets in predicting molecular and vibration spectra of gamma-oxo-[1,1'-biphenyl]-4-butanoic acid (fenbufen). DFT methods including mPW1PW91, HCTH, SVWN, PBEPBE, B3PW91 and B3LYP were investigated. Different basis sets including LANL2DZ, SDD, LANL2MB, CEP-4G, CEP-31G, and CEP-121G were also considered. It is remarkable that the mPW1PW91/LANL2DZ and mPW1PW91/SDD levels are clearly superior to all of the remaining DFT levels in predicting the structure of fenbufen. The calculated results also indicate that SVWN/LANL2DZ level show better performance in the vibration spectra prediction of fenbufen comparing other DFT methods.
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Affiliation(s)
- Yue Yang
- Institute of Watershed Science and Environmental Ecology, Wenzhou Medical College, Zhejiang 325035, China
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39
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Moré R, Scholz M, Busse G, Busse L, Paulmann C, Tolkiehn M, Techert S. Hydrogen bond dynamics in crystalline β-9-anthracene carboxylic acid--a combined crystallographic and spectroscopic study. Phys Chem Chem Phys 2012; 14:10187-95. [PMID: 22735829 DOI: 10.1039/c2cp40216e] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We compare results from single crystal X-ray diffraction and FTIR spectroscopy to elucidate the nature of hydrogen bonding in β-9-anthracene carboxylic acid (β-9AC, C(15)H(10)O(2)). The crystallographic studies indicate a disorder for the protons in the cyclic hydrogen bond. This disorder allows the determination of the energy difference between two proton sites along the hydrogen bond. The temperature dependent Fourier transform infrared spectroscopy (FTIR) underpins the crystallographic results. The combination of both methods allows the estimation of a one-dimensional potential curve describing the OH-stretching motion. The dynamical properties of the proton transfer along the hydrogen bond are extracted from this potential. The work presented here has profound implication on future studies of photochemical dynamics of crystalline β-9AC, which can deliver a deeper understanding of the mechanism of photochemical driven molecular machines and the optical and electronic properties of molecular organic semiconductors.
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Affiliation(s)
- René Moré
- Max-Planck-Institut für biophysikalische Chemie, Strukturdynamik (bio)chemischer Systeme, Am Fassberg 11, 37070 Göttingen, Germany.
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40
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Chandran A, Varghese HT, Mary YS, Panicker CY, Manojkumar TK, Van Alsenoy C, Rajendran G. Vibrational spectroscopic and quantum chemical calculations of (E)-N-Carbamimidoyl-4-((naphthalen-1-yl-methylene)amino)benzene sulfonamide. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 87:29-39. [PMID: 22153592 DOI: 10.1016/j.saa.2011.10.073] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2011] [Accepted: 10/31/2011] [Indexed: 05/31/2023]
Abstract
FT-IR and FT-Raman spectra of (E)-N-Carbamimidoyl-4-((naphthalen-1-yl-methylene)amino)benzene sulfonamide were recorded and analyzed. The vibrational wavenumbers were computing at various levels of theory. The data obtained from theoretical calculations are used to assign vibrational bands obtained experimentally. The results indicate that B3LYP method is able to provide satisfactory results for predicting vibrational frequencies and structural parameters. The calculated first hyperpolarizability is comparable with reported values of similar derivatives and is an attractive object for future studies of non-linear optics. The geometrical parameters of the title compound are in agreement with that of similar derivatives.
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Affiliation(s)
- Asha Chandran
- Department of Chemistry, TKM College of Arts and Science, Kollam, Kerala, India
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41
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Li Y, Zhang H, Liu Q. FT-IR spectroscopy and DFT calculation study on the solvent effects of benzaldehyde in organic solvents. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 86:51-55. [PMID: 22051410 DOI: 10.1016/j.saa.2011.09.056] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2011] [Revised: 09/19/2011] [Accepted: 09/27/2011] [Indexed: 05/31/2023]
Abstract
FT-IR spectra of benzaldehyde in 11 different organic solvents were recorded and analyzed. The density functional theory (DFT) B3LYP/6-31G* method was chosen to calculate the infrared spectrum of benzaldehyde in gaseous state. The electrostatic effects of different solvents in benzaldehyde solutions were calculated using DFT with the self-consistent isodensity polarizable continuum model (SCI-PCM). Two remarkable carbonyl (C=O) peaks of benzaldehyde were observed by FT-IR in alcohol solvents, which were caused by different hydrogen bond species and explained by ab initio calculation. The results showed that the combination of SCI-PCM model and ab initio calculation could give excellent agreements with FT-IR spectra of title compound in solutions.
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Affiliation(s)
- Yi Li
- Department of Chemistry, Zhejiang University, Zheda Road No. 38, Hangzhou 310027, Zhejiang, PR China
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42
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Shoba D, Karabacak M, Periandy S, Ramalingam S. FT-IR and FT-Raman vibrational analysis, ab initio HF and DFT simulations of isocyanic acid 1-naphthyl ester. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2011; 81:504-518. [PMID: 21764630 DOI: 10.1016/j.saa.2011.06.044] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2011] [Revised: 06/14/2011] [Accepted: 06/19/2011] [Indexed: 05/31/2023]
Abstract
The Fourier transform infrared and Fourier transform Raman spectra of isocyanic acid 1-naphthyl ester (C(11)H(7)NO) [ICANE] are recorded in solid phase, the harmonic vibrational frequencies, infrared intensities, Raman activities, bond length, bond angle and dihedral angle are calculated by HF and DFT methods by using different basis set. A detailed vibrational spectral analysis has been carried out and assignments of observed fundamental bands have been proposed on basis of peak positions and relative intensities. The scaled theoretical frequencies showed very good agreement with experimental values. A detailed interpretations of the infrared and Raman spectra of isocyanic acid 1-naphthyl ester are reported, the theoretical spectra for infrared and Raman spectrum of title molecule have been constructed. The effect due to the substitutions of isocyanato group is also investigated. A study on the electronic properties, such as excitation energies and wavelengths, are performed with different solvent by time-dependent DFT (TD-DFT) approach. HOMO and LUMO energies are calculated that these energies show charge transfer occurs within the molecule.
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Affiliation(s)
- D Shoba
- Department of Physics, Alpha College of Engineering & Technology, Puducherry, India
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43
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Yamamoto S, Watarai H, Bouř P. Monitoring the Backbone Conformation of Valinomycin by Raman Optical Activity. Chemphyschem 2011; 12:1509-18. [DOI: 10.1002/cphc.201000917] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2010] [Revised: 01/18/2011] [Indexed: 11/11/2022]
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