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Srivastava A, Dumpala RMR, Kumar P, Kumar R, Rawat N. Chemical and Redox Speciation of Uranyl with Three Environmentally Relevant Bifunctional Chelates: Multi-Technique Approach Combined with Theoretical Estimations. Inorg Chem 2022; 61:15452-15462. [PMID: 36123167 DOI: 10.1021/acs.inorgchem.2c01991] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Carbon and phosphorous are two primary elements common to the bio-geosphere and are omnipresent in both biotic and abiotic arenas. Phosphonate and carboxylate are considered as building blocks of glyphosate and humic substances and constituents of the cellular wall of bacteria and are the driving functionalities for most of the chemical interactions involving these two elements. Phosphonocarboxylates, a combination of both the functionalities in one moiety, are ideal models to dig deep into for understanding the chemical interactions of the two functional groups with metal ions. Phosphorous and carbon majorly exist as inorganic/organic phosphate and carboxylate, respectively, in the bio-geosphere. Aquatic contamination is a major concern for uranium, and the presence of complexing agents would alter the uranium concentrations in aquifers. Determination of solution thermodynamic parameters, speciation plots, redox patterns, Eh-pH diagrams, coordination structures, and molecular-level understanding by density functional theory calculations was carried out to interpret the uranyl (UO22+) interaction with three environmentally relevant phosphonocarboxylates, namely, phosphono-formic acid (PFA), phosphono-acetic acid (PAA), and phosphono-propanoic acid (PPA). UO22+ forms 1:1 complexes with the three phosphonocarboxylates in the monoprotonated form, having nearly the same stability, and the complexes [UO2(PFAH)], [UO2(PAAH)], and [UO2(PPAH)] involve chelate formation of five, six, and seven membered rings, respectively, through the participation of an oxygen each from the carboxylate and phosphonate, strengthened by an intra-molecular hydrogen bonding through the proton of the phosphonate moiety with uranyl oxygen. The complex formations are favored both enthalpically and entropically, with the latter being more contributive to the overall free energy of formation. The redox speciation showed an aqueous soluble complex formation over a wide pH range of 1-8. Electrospray ionization mass spectrometry and extended X-ray absorption fine structure established the coordination modes, which are further corroborated by density functional calculations. The knowledge gained from the present studies provide potential inputs in framing the cleanup, sequestering, microbial, and bio-remediation strategies for uranyl from aquatic environments.
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Affiliation(s)
- Ashutosh Srivastava
- Radiochemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
| | - Rama Mohana Rao Dumpala
- Radiochemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India.,Institute for Nuclear Waste Disposal, Karlsruhe Institute of Technology, P.O. Box 3640, Karlsruhe 76021, Germany
| | - Pranaw Kumar
- Fuel Chemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
| | - Ravi Kumar
- Atomic and Molecular Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
| | - Neetika Rawat
- Radiochemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
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Luo H, Yang RG, Chen ZH, Zhong GQ. Three bismuth(III) complexes constructed by N-containing heterocyclic carboxylic acids: Synthesis, crystal structure and photocatalytic activity. J SOLID STATE CHEM 2021. [DOI: 10.1016/j.jssc.2021.122256] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Dumpala RMR, Srivastava A, Rawat N. Experimental and theoretical approach to probe the aquatic speciation of transuranic (neptunyl) ion in presence of two omnipresent organic moieties. CHEMOSPHERE 2021; 273:129745. [PMID: 33524762 DOI: 10.1016/j.chemosphere.2021.129745] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2020] [Revised: 01/06/2021] [Accepted: 01/18/2021] [Indexed: 06/12/2023]
Abstract
Pyrazines are omnipresent in nature and have their occurrence in plants, microbes, food supplies, marine arenas. The present studies aimed at aquatic speciation of the neptunyl ion (NpO2+) with two pyrazine compounds namely pyrazine monocarboxylic acid (PMC) and pyrazine dicarboxylic acid (PDC). Absorption spectrophotometry was used to probe the stability, speciation and spectral properties for the complexation process. NpO2+ forms a more stable complex with PMC than PDC for 1:1 (ML), while for 1:2 (ML2) the opposite trend is observed. The extent of shift in λmax, which is also an indicator for the strength of complexation, reflected similar trends for the complexation process. Isothermal titration calorimetry was employed to determine the enthalpies of complex formation, which is found to be endothermic. The complexation process is entropy driven. Linear free energy correlations were established to retrieve the coordination modes of the complexes. The variation in peak potentials (the cyclic voltammograms) with change in pH and metal to ligand ratio were explored to understand redox speciation, electron transfer kinetics and Eh-pH characteristics for the interaction of NpO2+ with pyrazine carboxylate ligands. Density functional theory calculations were employed to optimize the geometries and to calculate the bond distances and partial charges on key atoms of the optimized geometries. The theoretical calculations helped to reveal the contributions from two different configurations of the same geometry towards the optical absorption. The bond distances and partial charges estimated theoretically helped to understand the aqueous interactions at the molecular level.
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Affiliation(s)
| | - Ashutosh Srivastava
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai, 400085, India
| | - Neetika Rawat
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai, 400085, India
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Dumpala RMR, Das SK, Ali M, Boda A, Kumar P, Rawat N, Kumar A, Ali SM. Characterization of Thorium-Pyrazinoic acid complexation and its decorporation efficacy in human cells and blood. CHEMOSPHERE 2021; 271:129547. [PMID: 33445029 DOI: 10.1016/j.chemosphere.2021.129547] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 12/30/2020] [Accepted: 01/01/2021] [Indexed: 06/12/2023]
Abstract
Thorium (Th) exposure to the human beings is a radiochemical hazard and the chelation therapy by suitable drugs is the major prevention approach to deal with. The present studies aimed at usage of pyrazinoic acid (PCA), which is a prodrug to treat tuberculosis, for its usage as decorporating agent for thorium from human body. The present studies provide a comprehensive knowledge on the chemical interaction and biological efficacy of pyrazinoic acid (PCA) for decorporation of Thorium from the human body. The thermodynamic parameters for Th-PCA speciation are determined by both experiment and theory. The potentiometric data analysis and Electro-Spray Ionization Mass Spectrometry (ESI-MS) studies revealed the formation of MLi (i = 1-4) species with the decrease in stepwise stability constants. All the species formations are endothermic reactions and are predominantly entropy-driven. Biological experiments using human erythrocytes, whole blood and normal human lung cells showed cytocompatibility and decorporation ability of PCA for Thorium. Density functional calculations have been carried out to get insights on interaction process at molecular level. The experimental results and theoretical predictions found to be in line with each other. Present findings on complexation of Th by PCA and its evaluation in human cells and blood would further motivate determination of its safety levels and decorporation efficacy in animal models.
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Affiliation(s)
| | - Sourav Kumar Das
- Radiation Biology & Health Sciences Division, Bhabha Atomic Research Centre, Mumbai, 400094, India
| | - Manjoor Ali
- Radiation Biology & Health Sciences Division, Bhabha Atomic Research Centre, Mumbai, 400094, India
| | - Anil Boda
- Chemical Engineering Division, Bhabha Atomic Research Centre, Mumbai, 400094, India
| | - Pranaw Kumar
- Fuel Chemistry Division, Bhabha Atomic Research Centre, Mumbai, 400094, India
| | - Neetika Rawat
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai, 400094, India
| | - Amit Kumar
- Radiation Biology & Health Sciences Division, Bhabha Atomic Research Centre, Mumbai, 400094, India.
| | - Sk Musharaf Ali
- Chemical Engineering Division, Bhabha Atomic Research Centre, Mumbai, 400094, India
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Hou C, Sun S, Liu Z, Zhang H, Liu Y, An Q, Zhao J, Ma J, Sun Z, Chu W. Visible‐Light‐Induced Decarboxylative Acylation of Pyridine
N
‐Oxides with α‐Oxocarboxylic Acids Using Fluorescein Dimethylammonium as a Photocatalyst. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202100168] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Chuanfu Hou
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Shouneng Sun
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Ziqi Liu
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Hui Zhang
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Yue Liu
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Qi An
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Jian Zhao
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Junjie Ma
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Zhizhong Sun
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
| | - Wenyi Chu
- School of Chemistry and Materials Science Heilongjiang University Harbin 150080 People's Republic of China
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Sharma S, Dumpalan RMR, Rawat N. Experimental and DFT studies on complexation of uranyl with N-(2-Hydroxyethyl)iminodiacetic acid in aqueous medium. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2020.119653] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Dumpala RMR, Boda A, Kumar P, Rawat N, Ali SM. Reduction in Coordination Number of Eu(III) on Complexation with Pyrazine Mono- and Di-Carboxylates in Aqueous Medium. Inorg Chem 2019; 58:11180-11194. [DOI: 10.1021/acs.inorgchem.9b01772] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
| | - Anil Boda
- Chemical Engineering Division, Bhabha Atomic Research Centre, Mumbai 400085, India
| | - Pranaw Kumar
- Fuel Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400085, India
| | - Neetika Rawat
- Radioanalytical Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400085, India
| | - Sk. Musharaf Ali
- Chemical Engineering Division, Bhabha Atomic Research Centre, Mumbai 400085, India
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Qu W, Yuan D, Zhao L, Zong W, Liu R. Exploring the binding interaction between copper ions and Candida rugosa lipase. Toxicol Res (Camb) 2018; 7:1100-1107. [PMID: 30542604 PMCID: PMC6249630 DOI: 10.1039/c8tx00158h] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Accepted: 09/16/2018] [Indexed: 01/20/2023] Open
Abstract
The wide range of applications of copper have caused widespread concern about its toxicity. However, few studies have reported the mechanism of the binding interaction between copper ions and digestive enzymes, which play an important role in physiological health and industrial production. In this study, the effects of copper ions on the conformation and activity of Candida rugosa lipase (CRL) were evaluated by isothermal titration calorimetry (ITC), multiple spectral techniques, molecular simulation and enzyme activity assays. The results showed that copper ions can be combined with lipase, the binding affinity constant (K) was (2.91 ± 0.619) × 10-3 M-1, the binding process was a spontaneous process, and the main force was the hydrophobic force. Rather than increasing the hydrophobicity of the amino acid microenvironment of CRL, the spectral methods demonstrated that copper can also make the protein peptide bond structure compact, changing its secondary structure. In addition, molecular simulation results showed that copper ions opened the "lid" of the CRL and entered the active center, which consequently changed the conformation of the CRL molecule. Structural changes may cause changes in enzyme activity. The increased activity of CRL with the addition of copper ions was verified by enzyme activity assay. In summary, copper showed an effect on CRL at the molecular level, which means its toxicity should receive more attention.
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Affiliation(s)
- Wenjun Qu
- School of Environmental Science and Engineering , Shandong University , China-America CRC for Environment & Health , Shandong Province , 72# Jimo Binhai Road , Qingdao , Shandong 266237 , P.R. China . ; ; Tel: +86-531-88365489
| | - Dong Yuan
- Department of Chemistry and Chemical Engineering , Qilu Normal University , Jinan 250013 , P.R. China
| | - Lining Zhao
- School of Environmental Science and Engineering , Shandong University , China-America CRC for Environment & Health , Shandong Province , 72# Jimo Binhai Road , Qingdao , Shandong 266237 , P.R. China . ; ; Tel: +86-531-88365489
| | - Wansong Zong
- College of Population , Resources and Environment , Shandong Normal University , 88# East Wenhua Road , Jinan 250014 , P. R. China
| | - Rutao Liu
- School of Environmental Science and Engineering , Shandong University , China-America CRC for Environment & Health , Shandong Province , 72# Jimo Binhai Road , Qingdao , Shandong 266237 , P.R. China . ; ; Tel: +86-531-88365489
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