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Calapez F, Dias R, Cesário R, Pedras B, Canário J, Martins Z. Spectroscopic Protocol for Biosignature Detection: Arctic Ice Samples as Analogs for Icy Moons. ASTROBIOLOGY 2025; 25:284-295. [PMID: 40151958 DOI: 10.1089/ast.2024.0131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/29/2025]
Abstract
The moons of Jupiter and Saturn, such as Europa and Enceladus, are strong candidates for the search for life outside of Earth. Together with the use of direct observational methods, physical and chemical processes that take place on icy moons may be studied on planetary field analogs, that is, on similar reachable locations on Earth. Fieldwork performed on planetary field analogs can test protocols and technology that may be applied on future space missions to extraterrestrial environments. The Arctic is a strong candidate for such studies. This study assesses a spectroscopic protocol for biosignature detection in the Arctic, as a proxy to icy moons. Samples of ice and the water underneath were collected by our team in different locations at and nearby Hudson Bay, Canada, and spectroscopic analysis detected the presence of humic acid in all the samples. On the contrary, biosignatures such as amino acids and β-carotene may have been present in concentrations below the limit of detection of the equipment used. With proper optimization, it will be possible to implement this simple protocol that relies on lightweight equipment in future space missions to icy moons.
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Affiliation(s)
- Francisco Calapez
- Centro de Química Estrutural, Institute of Molecular Sciences and Department of Chemical Engineering, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
| | - Rodrigo Dias
- Centro de Química Estrutural, Institute of Molecular Sciences and Department of Chemical Engineering, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
| | - Rute Cesário
- Centro de Química Estrutural, Institute of Molecular Sciences and Department of Chemical Engineering, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
| | - Bruno Pedras
- Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
- Associate Laboratory i4HB-Institute for Health and Bioeconomy, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
| | - João Canário
- Centro de Química Estrutural, Institute of Molecular Sciences and Department of Chemical Engineering, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
| | - Zita Martins
- Centro de Química Estrutural, Institute of Molecular Sciences and Department of Chemical Engineering, Instituto Superior Técnico, Universidade de Lisboa, Lisboa, Portugal
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Hong S, Zhang Y, Li X, Teng A, Li L, Chen H. New approach for near-infrared wavelength selection using a combination of MIC and firefly evolution. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 316:124343. [PMID: 38676985 DOI: 10.1016/j.saa.2024.124343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 04/03/2024] [Accepted: 04/23/2024] [Indexed: 04/29/2024]
Abstract
Full-length spectral data analysis has a big problem that the variables are highly in collinearity and correlation. Spectral wavelength selection is a continuing hot topic in quantitative or qualitative analysis. In this paper, we propose a new approach for near-infrared (NIR) wavelength selection. The novel strategy mainly refers to the modification of maximum information coefficient (MIC) method and an improvement of firefly evolutionary algorithm. We introduce the orthogonal decomposition to modify the MIC method, so as to search the informative signals conceived in projection vectors. We also raise the common firefly algorithm (FA) as in the discretized mode, and design a novel adaptive mapping function to improve its intelligent computing effect. In experiment, the modified MIC (MICm) method and the adaptive discrete FA algorithm (DFAadp) are joint together for combined optimization of the NIR calibration model. The proposed combined modeling strategy is applied for quantitative analysis of the fishmeal samples, in the concern to select their informative variables/wavelengths. Experimental results indicate that the combination of MICm and DFAadp perform better than traditional MIC method and common DFA. We conclude that the proposed combined optimization strategy is beneficial for wavelength selection in NIR spectral analysis. It is anticipated to be validated for further applications in a wide range.
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Affiliation(s)
- Shaoyong Hong
- School of Data Science, Guangzhou Huashang College, Guangzhou 511300, China
| | - Youyou Zhang
- Department of General Education, Xuzhou College of Industrial Technology, Xuzhou, 221140, China
| | - Xinyi Li
- School of Data Science, Guangzhou Huashang College, Guangzhou 511300, China
| | - An Teng
- School of Data Science, Guangzhou Huashang College, Guangzhou 511300, China
| | - Linghui Li
- Faculty of Innovation Engineering, Macau University of Science and Technology, Macau SAR 999078, China
| | - Huazhou Chen
- School of Mathematics and Statistics, Guilin University of Technology, Guilin 541004, China.
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S-C Yang C, Jin F, Trivedi S, Hommerich U, Nemes L, Samuels AC. Long-wave infrared laser-induced breakdown spectroscopy of complex gas molecules in the vicinity of a laser-induced plasma. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 294:122536. [PMID: 36841136 DOI: 10.1016/j.saa.2023.122536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 02/06/2023] [Accepted: 02/19/2023] [Indexed: 06/18/2023]
Abstract
Vibration-rotation signatures of intact water and complex organic molecules in vapor phase were detected, identified, and mode-assigned in the long-wave infrared emissions of laser-induced plasma. Time resolved long-wave infrared emissions were also studied to assess the temporal behaviors of these gaseous molecular emitters. The temperatures of these molecular vapors in the hot and transient vapor-plasma plume of the laser-induced plasma were estimated to be well above room temperatures during their existence. The temperatures of the water vapors in the vapor-plasma plume were found to be evolving with time and ranging from > 2700 K at 10 µs to ∼ 1500 K at 200 µs after plasma initiations using HITRAN/HAPI based molecular spectral analysis. The observations in the present study comprise (to our knowledge) the first direct evidence of hot water and intact complex organic gas molecules in the vicinity of the laser-induced plasma. The findings presented in this work serve as an important step forward in improving the understanding of the thermodynamic characteristics (such as temperatures and phases) of intact complex molecules in a hot and intricate system such as the vapor-plasma plume of a laser-induced plasma, which is essential in both fundamental studies of plasmas and of laser-induced plasma based analytical applications.
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Affiliation(s)
| | - Feng Jin
- Brimrose Corporation of America, Baltimore, MD 21152, USA
| | - Sudhir Trivedi
- Brimrose Corporation of America, Baltimore, MD 21152, USA
| | - Uwe Hommerich
- Department of Physics Hampton University, Hampton, VA 23668, USA
| | - Laszlo Nemes
- Research Center for Natural Sciences, Institute of Materials and Environmental Chemistry, Hungarian Academy of Sciences, Budapest 1519, Hungary
| | - Alan C Samuels
- Edgewood Chemical Biological Center, Aberdeen Proving Ground, MD 21010, USA
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Yang CSC, Jin F, Trivedi S, Hommerich U, Samuels AC. Comparative Long-Wave Infrared Laser-Induced Breakdown Spectroscopy Employing 1-D and 2-D Focal Plane Array Detectors. SENSORS (BASEL, SWITZERLAND) 2023; 23:1366. [PMID: 36772407 PMCID: PMC9921144 DOI: 10.3390/s23031366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 01/16/2023] [Accepted: 01/24/2023] [Indexed: 06/18/2023]
Abstract
Long-wave infrared (LWIR) emissions of laser-induced plasma on solid potassium chloride and acetaminophen tablet surfaces were studied using both a one-dimensional (1-D) linear array detection system and, for the first time, a two-dimensional (2-D) focal plane array (FPA) detection system. Both atomic and molecular infrared emitters in the vicinity of the plasma were identified by analyzing the detected spectral signatures in the infrared region. Time- and space-resolved long-wave infrared emissions were also studied to assess the temporal and spatial behaviors of atomic and molecular emitters in the plasma. These pioneer temporal and spatial investigations of infrared emissions from laser-induced plasma would be valuable to the modeling of plasma evolutions and the advances of the novel LWIR laser-induced breakdown spectroscopy (LIBS). When integrated both temporally (≥200 µs) and spatially using a 2-D FPA detector, the observed intensities and signal-to-noise-ratio (SNR) of single-shot LWIR LIBS signature emissions from intact molecules were considerably enhanced (e.g., with enhancement factors up to 16 and 3.76, respectively, for a 6.62 µm band of acetaminophen molecules) and, in general, comparable to those from the atomic emitters. Pairing LWIR LIBS with conventional ultraviolet-visible-near infrared (UV/Vis/NIR) LIBS, a simultaneous UV/Vis/NIR + LWIR LIBS detection system promises unprecedented capability of in situ, real-time, and stand-off investigation of both atomic and molecular target compositions to detect and characterize a range of chemistries.
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Affiliation(s)
| | - Feng Jin
- Brimrose Corporation of America, Baltimore, MD 21152, USA
| | - Sudhir Trivedi
- Brimrose Corporation of America, Baltimore, MD 21152, USA
| | - Uwe Hommerich
- Department of Physics, Hampton University, Hampton, VA 23668, USA
| | - Alan C. Samuels
- Edgewood Chemical Biological Center, Aberdeen Proving Ground, MD 21010, USA
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Stuart MB, Davies M, Hobbs MJ, Pering TD, McGonigle AJS, Willmott JR. High-Resolution Hyperspectral Imaging Using Low-Cost Components: Application within Environmental Monitoring Scenarios. SENSORS 2022; 22:s22124652. [PMID: 35746433 PMCID: PMC9227882 DOI: 10.3390/s22124652] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 06/14/2022] [Accepted: 06/17/2022] [Indexed: 01/04/2023]
Abstract
High-resolution hyperspectral imaging is becoming indispensable, enabling the precise detection of spectral variations across complex, spatially intricate targets. However, despite these significant benefits, currently available high-resolution set-ups are typically prohibitively expensive, significantly limiting their user base and accessibility. These limitations can have wider implications, limiting data collection opportunities, and therefore our knowledge, across a wide range of environments. In this article we introduce a low-cost alternative to the currently available instrumentation. This instrument provides hyperspectral datasets capable of resolving spectral variations in mm-scale targets, that cannot typically be resolved with many existing low-cost hyperspectral imaging alternatives. Instrument metrology is provided, and its efficacy is demonstrated within a mineralogy-based environmental monitoring application highlighting it as a valuable addition to the field of low-cost hyperspectral imaging.
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Affiliation(s)
- Mary B. Stuart
- Department of Electronic and Electrical Engineering, University of Sheffield, Sheffield S1 4DE, UK; (M.B.S.); (M.D.); (M.J.H.)
| | - Matthew Davies
- Department of Electronic and Electrical Engineering, University of Sheffield, Sheffield S1 4DE, UK; (M.B.S.); (M.D.); (M.J.H.)
| | - Matthew J. Hobbs
- Department of Electronic and Electrical Engineering, University of Sheffield, Sheffield S1 4DE, UK; (M.B.S.); (M.D.); (M.J.H.)
| | - Tom D. Pering
- Department of Geography, University of Sheffield, Sheffield S10 2TN, UK; (T.D.P.); (A.J.S.M.)
| | - Andrew J. S. McGonigle
- Department of Geography, University of Sheffield, Sheffield S10 2TN, UK; (T.D.P.); (A.J.S.M.)
| | - Jon R. Willmott
- Department of Electronic and Electrical Engineering, University of Sheffield, Sheffield S1 4DE, UK; (M.B.S.); (M.D.); (M.J.H.)
- Correspondence:
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Muñoz-Iglesias V, Sánchez-García L, Carrizo D, Molina A, Fernández-Sampedro M, Prieto-Ballesteros O. Raman spectroscopic peculiarities of Icelandic poorly crystalline minerals and their implications for Mars exploration. Sci Rep 2022; 12:5640. [PMID: 35379897 PMCID: PMC8979959 DOI: 10.1038/s41598-022-09684-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2021] [Accepted: 03/28/2022] [Indexed: 11/09/2022] Open
Abstract
In this work, we have analyzed natural samples collected at three hydrothermal areas of Iceland by Raman spectroscopy. The studied high-latitude regions are considered environmentally and mineralogically appropriate Martian analogues since they are rich in weathered basalts that have been altered by hydrothermalism to mineral phases such as silica, clay minerals, sulfates, oxides, and sulfur. The main objective of this work was to assess the relation of the spectroscopic signatures of alteration to hydrothermal processes and biomediation, considering previous studies focused on the detection of lipid biomarkers in the same samples. The recorded Raman spectra, taken with optical parameters similar to the ExoMars 2022 Raman spectrometer, showed structural modifications in all secondary minerals in the form of peak shifts (in the case of sulfur and clay minerals), changes in the relative ratio intensity (in anatase) and/or shape broadening (in sulfates and hematite). These results reveal the suitability of Raman spectroscopy to examine areas rich in water-altered minerals, where a mixture of crystalline and amorphous phases can co-exist. The detection of silica is singularly interesting since, on the one hand, it can imply the past existence of hydrothermal hot springs rich in nutrient and redox gradients and, on the other hand, provides excellent matrix for biosignature preservation. The data can be helpful as an astrobiological database for the forthcoming missions to Mars, where potential upwelling groundwater systems could have altered the mineral phases in a similar way to that observed in this work.
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Indicator Minerals, Pathfinder Elements, and Portable Analytical Instruments in Mineral Exploration Studies. MINERALS 2022. [DOI: 10.3390/min12040394] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Until recently, the classic approach to mineral exploration studies was to bring the field samples/drill cores collected during field studies to the laboratory, followed by laborious analysis procedures to generate the analytical data. This is very expensive, time-consuming, and difficult for exploring vast areas. However, rapid technological advances in field-portable analytical instruments, such as portable visible and near-infrared spectrophotometers, gamma-ray spectrometer, pXRF, pXRD, pLIBS, and µRaman spectrometer, have changed this scenario completely and increased their on-site applications in mineral exploration studies. LED fluorimeter is a potential portable tool in the hydrogeochemical prospecting studies of uranium. These instruments are currently providing direct, rapid, on-site, real-time, non-destructive, cost-effective identification, and determination of target elements, indicator minerals and pathfinder elements in rock, ore, soil, sediment, and water samples. These portable analytical instruments are currently helping to obtain accurate chemical and mineralogical information directly in the field with minimal or no sample preparation and providing decision-making support during fieldwork, as well as during drilling operations in several successful mineral exploration programs. In this article, the developments in these portable devices, and their contributions in the platinum group elements (PGE), rare earth elements (REE), gold, base metals, and lithium exploration studies both on land and on the ocean bed, have been summarized with examples.
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Yang CS, Bower DM, Jin F, Hewagama T, Aslam S, Nixon CA, Kolasinski J, Samuels AC. Raman and UVN+LWIR LIBS Detection System for In-situ Surface Chemical Identification. MethodsX 2022; 9:101647. [PMID: 35308253 PMCID: PMC8924681 DOI: 10.1016/j.mex.2022.101647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2021] [Accepted: 02/22/2022] [Indexed: 12/01/2022] Open
Abstract
Laser Induced Breakdown Spectroscopy (LIBS) in the Ultra Violet/Visible/Near-IR (UVN) spectral range is a powerful analytical tool that facilitates the interpretation of Raman spectroscopic data by providing additional details in elemental chemistry. To acquire the complete information of molecular vibrations for more accurate and precise chemical bonding and structural analysis, an ideal in situ optical sensing facility should be able to rapidly probe the broad vibrational dipole and polarizability responses of molecules by acquiring both Raman scattering and mid-IR emission spectroscopic signatures. Recently, the research team at Brimrose has developed a novel optical technology, Long-Wave IR (LWIR) LIBS. Critical experimental approaches were made to capture the infrared molecular emission signatures from vibrationally excited intact samples excited by laser-induced plasma in a LIBS event. LWIR LIBS is the only fieldable mid-IR emission spectroscopic technique to-date that that offers the same instrumental and analytical advantages of both UVN LIBS and Raman spectroscopy in in-situ stand-off field applications and can perform rapid and comprehensive molecular structure analysis without any sample-preparation.A single excitation laser pulse is used to trigger both UVN and LWIR spectrometers simultaneously. Time-resolved UVN-LWIR LIBS measurements showed the evolution of both atomic and molecular signature emissions of target compounds in the laser-induced plasma. The technique was applied to the characterization of mineral and organic compounds in planetary analog samples.
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Affiliation(s)
- Clayton S.C. Yang
- Brimrose Corporation of America, Sparks-Glencoe, MD, USA
- Corresponding author.
| | | | - Feng Jin
- Brimrose Corporation of America, Sparks-Glencoe, MD, USA
| | | | - Shahid Aslam
- NASA Goddard Space Flight Center, Greenbelt, MD, USA
| | | | | | - Alan C. Samuels
- Edgewood Chemical Biological Center, Aberdeen Proving Ground, MD, USA
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