The effect of shrubland and grassland vegetation types on soil fauna and flora activities in a mountainous semi-arid landscape of Iran

Biodiversity in mountain soils above the treeline

Biological diversity in mountain ecosystems has been increasingly studied over the last decade. This is also the case for mountain soils, but no study to date has provided an overall synthesis of the current state of knowledge. Here we fill this gap with a first global analysis of published research on cryptogams, microorganisms, and fauna in mountain soils above the treeline, and a structured synthesis of current knowledge. Based on a corpus of almost 1400 publications and the expertise of 37 mountain soil scientists worldwide, we summarise what is known about the diversity and distribution patterns of each of these organismal groups, specifically along elevation, and provide an overview of available knowledge on the drivers explaining these patterns and their changes. In particular, we document an elevation-dependent decrease in faunal diversity above the treeline, while for cryptogams there is an initial increase above the treeline, followed by a decrease towards the nival belt. Thus, our data confirm the key role that elevation plays in shaping the biodiversity and distribution of these organisms in mountain soils. The response of prokaryote diversity to elevation, in turn, was more diverse, whereas fungal diversity appeared to be substantially influenced by plants. As far as available, we describe key characteristics, adaptations, and functions of mountain soil species, and despite a lack of ecological information about the uncultivated majority of prokaryotes, fungi, and protists, we illustrate the remarkable and unique diversity of life forms and life histories encountered in alpine mountain soils. By applying rule- as well as pattern-based literature-mining approaches and semi-quantitative analyses, we identified hotspots of mountain soil research in the European Alps and Central Asia and revealed significant gaps in taxonomic coverage, particularly among biocrusts, soil protists, and soil fauna. We further report thematic priorities for research on mountain soil biodiversity above the treeline and identify unanswered research questions. Building upon the outcomes of this synthesis, we conclude with a set of research opportunities for mountain soil biodiversity research worldwide. Soils in mountain ecosystems above the treeline fulfil critical functions and make essential contributions to life on land. Accordingly, seizing these opportunities and closing knowledge gaps appears crucial to enable science-based decision making in mountain regions and formulating laws and guidelines in support of mountain soil biodiversity conservation targets.

Long-term landfill leachate pollution suppresses soil health indicators in natural ecosystems of a semi-arid environment

Landfills pose a global issue for soil functionality and health, especially in underdeveloped nations where limited resources impede the adoption of comprehensive waste management policies, such as waste processing and sorting techniques. Leachate emissions from waste landfills are a cause for concern, primarily due to their toxic effect if left uncontrolled in the environment, and the potential for waste storage sites to produce leachate for hundreds of years after closure. Few efforts have been made to improve waste collection and disposal facilities in the world, especially in developing countries. This research aims to investigate the influence of waste leachate on soil health indicators in natural woodland and rangeland ecological systems in a semi-arid mountainous region in the north of Iran. Based on results, forest unpolluted sites (2008) exhibited the highest values of nutrient elements in litter and root components. Landfills led to a rise in soil bulk density and a simultaneous decrease in soil organic matter (SOM), porosity, aggregate stability, particulate organic carbon and nitrogen (POC and PON), as well as available nutrients, ammonium (NH4+) and nitrate (NO3-) levels. Additionally, microbial parameters (respiration and biomass) and enzymes (urease, acid phosphatase, arylsulfatase and invertase) experienced a decrease in areas affected by the landfill sites over time of 2008-2023. Forest and rangeland landfill sites (2023) sites had lower density and biomass of the three earthworm groups. Acari, Collembola, nematodes, protozoans, fungi and bacteria were also reduced in landfill sites (nearly 1-2 times more in uncontaminated forest and rangeland sites). Lumbricus terrestris earthworms exhibited a clear presence in all the studied sites, and this demonstrates the ability of this earthworm species to be active in severe pollution conditions. The spatial pattern of soil cadmium and lead changes indicates the high variance of these characteristics under the influence of landfills in the study sites. Finally, the soil health indicators (according to soil physical, chemical, and biological parameters) decreased from forest unpolluted sites in 2008 to rangeland landfill sites in 2023, which is linked to the release of landfill leachate. These results are noteworthy for all countries and governments that rely on natural ecosystems for waste management without engineering operations or technical intervention. Furthermore, both governments and stakeholders must implement effective waste management systems. The research offers valuable information that can assist decision-makers engaged in sustainable solid waste management in Iran and comparable areas. Besides that, it is highly recommended to prioritize recycling and phytoremediation processes. Ultimately, worldwide efforts to achieve environmental sustainability need a significant focus on the effective management of hazardous waste. Consequently, investigations covering this topic should be continued, as they allow the evaluation of the environmental effects of the gradual accumulation of pollution in soils surrounding uncontrolled municipal solid waste landfills.

Litter and soil properties under woody and non-woody vegetation types: Implication for ecosystem management in a mountainous semi-arid landscape

There are contrasting reports about whether and how vegetation types influence litter and soil properties. Accurate and comprehensive assessment of the complex relationship between vegetation types, litter and soil characteristics in semi-arid mountain landscapes is almost unknown. Thus, the purpose of this research was to study the effects of (1) Carpinus orientalis Miller., (2) Crataegus melanocarpa M.B., (3) Rhamnus pallasii Fisch. and C.A.Mey, (4) Agropyron longiaristatum Boiss, (5) Bromus tomentolus Bioss. and (6) Hordeum vulgare L. on litter properties and soil physical, chemical, biochemical and biological features in northern Iran. A sampling of the organic layer (litter) and mineral soil (30 × 30 cm) from a depth of 0-10 cm was done for all characteristics in the summer season and for soil microclimate and biological characteristics in the summer and fall seasons. A total of 90 litter samples, 90 soil samples in summer and 90 soil samples in fall (6 vegetation types × 2 seasons × 15 samples) were taken from the area and transferred to the laboratory. Results showed that the Carpinus improved litter properties, soil organic matter contents, total N and available nutrients (P, K, Ca and Mg) and enzyme activities (urease, acid phosphatase, arylsulfatase and invertase). In addition, the population of earthworm groups (epigeic, anecic, and endogeic), acarina, collembola, nematodes, protozoa (especially in the fall season) and bacteria and fungi (especially in the summer season) under Carpinus significantly increased. Data analysis demonstrated higher soil fertility and biological activities in the woody vegetation, which can be assigned to the higher litter input and nutrients. Overall, the findings of this study showed that woody vegetation, especially Carpinus, can improve soil properties at high altitudes of mountainous, semi-arid sites that are often considered as especially fragile and sensitive ecosystems.

Degree of urbanization and vegetation type shape soil biodiversity in city parks

Urbanization negatively impacts aboveground biodiversity, such as bird and insect communities. City parks can reduce these negative impacts by providing important habitat. However, it remains poorly understood how the degree of urbanization and vegetation types within city parks (e.g., lawns, woodland) impact soil biodiversity. Here we investigated the impact of the degree of urbanization (urban vs. suburban) and vegetation type (lawn, shrub-lawn, tree-lawn and tree-shrub mixtures) on soil biodiversity in parkland systems. We used eDNA metabarcoding to characterize soil biodiversity of bacteria, fungi, protists, nematodes, meso- and macrofauna across park vegetation types in urban and suburban regions in Xiamen, China. We observed a strong effect of the degree of urbanization on the richness of different soil biota groups, with higher species richness of protists and meso/macrofauna in urban compared to suburban areas, while the richness of bacteria and fungi did not differ, and the difference of nematode richness depended on vegetation type. At the functional level, increased degree of urbanization associated with greater species richness of bacterivores, plant pathogens and animal parasites. These urbanization effects were at least partly modulated by higher soil phosphorous levels in urban compared to suburban sites. Also, the vegetation type impacted soil biodiversity, particularly fungal richness, with the richness of pathogenic and saprotrophic fungi increasing from lawn to tree-shrub mixtures. Tree-shrub mixtures also had the highest connectedness between biotas and lowest variation in the soil community structure. Overall, we show that soil biodiversity is strongly linked to the degree of urbanization, with overall richness increasing with urbanization, especially in bacterivores, plant pathogens and animal parasites. Targeted management of vegetation types in urban areas should provide a useful way to help mitigate the negative effect of urbanization on soil biodiversity.

Non-native and native tree species plantations and seasonality could have substantial impacts on the diversity of indigenous soil fauna in a semi-arid forest ecosystem

The temporal and spatial dynamics of soil fauna in many terrestrial ecosystems are still not fully understood, while soil fauna is one of the most critical characteristics in assessing soil quality. Therefore, the effects of native [Quercus brantii (QP) and Amygdalus scoparia (AMP)] and non-native [Cupressus arizonica (CUP) and Pinus eldarica (PIN)] plantations and natural trees [Quercus brantii coppice trees (QNC), standard (QNS), and Amygdalus scoparia (AMN)] on diversity and abundance of macro- and mesofauna were done in the semi-arid forest of Zagros, Iran. Samples were collected beneath the canopy of woody species and the outer edge of the canopy in spring and summer seasons. For this purpose, soil samples [(7 samples per woody species + control) × 2 seasons × 3 replicates] were taken from 0 to 20 cm depths. Each soil sample was a mix of three soil cores. For the macrofauna, 15 species belonging to four families (in spring) and 17 species in nine families (in summer) were collected and identified. For the soil mesofauna, 14 species belonging to 14 families (in spring) and 13 species in 13 different families (in summer) were identified, respectively. The fauna diversity indices under the canopy of studied species were higher in summer season than in spring. The result showed that the macrofauna diversity was affected by tree species, while mesofauna was affected by seasonal changes. Macrofauna biodiversity was higher under the canopy of PIN and CUP than other trees. Principle component analysis showed that the diversity of the macrofauna was higher under the canopy of PIN and CUP, and influenced by soil characteristic properties, soil properties did not influence them. Yet the diversity of the mesofauna was affected by soil characteristics and was higher in areas with higher organic carbon, nitrogen, substrate-induced respiration, basal respiration, microbial carbon biomass, and alkaline phosphatase. In addition, mesofauna biodiversity had a significant positive correlation with the soil quality index (SQI). SQI was higher under the canopy of natural stands, especially the QNS. Conservation of native species (QNS, QNC, and AMN) and plantation with native deciduous species (QP and AMP) seem to moderate environmental conditions and increase soil macro- and mesofauna diversity and SQI.

The role of topographic and soil factors on woody plant encroachment in mountainous rangelands: A mini literature review

Mountainous rangelands provide key ecosystem goods and services, particularly for human benefit. In spite of these benefits, mountain grasslands are undergoing extensive land-cover change as a result of woody plant encroachment. However, the influence of topographic and soil factors on woody plant encroachment is complex and has not yet been studied comprehensively. The aim of this review was to establish current knowledge on the influence of topographic and soil factors on woody plant encroachment in mountainous rangelands. To find relevant literature for our study on the impact of topographic and soil factors on woody plant encroachment in mountain rangelands, we conducted a thorough search on ScienceDirect and Google Scholar using various search terms. Initially, we found 27,745 papers. We narrowed down the search to include only 66 papers published in English that directly addressed the research area. The effect of slope aspect and slope position on woody plant encroachment is complex and dynamic, with no universal consensus on their impact. Some studies found higher woody plant encroachment on the cooler slopes, while others found increased woody plant encroachment on the warmer slopes. Slope gradient has a significant impact on woody plant encroachment, with steeper slopes tending to have more woody plant encroachment than gentle slopes. Soil texture and depth are important soil factors affecting woody plant encroachment. Coarse-textured soils promote the growth of woody plants, while fine-textured soils limit it. The effect of soil depth on woody plant encroachment remain unclear and requires further research. Soil moisture availability, soil nutrient content and soil microbial community are influenced by topography, which in turn affect the woody plant growth and distribution. In conclusion, the spread of woody plants in mountainous rangelands is a complex and dynamic process influenced by a range of factors. Further research is needed to fully understand the mechanisms behind these interactions and to develop effective strategies for managing woody plant encroachment in mountainous rangelands.

Soil quality cannot be improved after thirty years of land use change from forest to rangeland

Soil quality can be assessed by measuring its physical, chemical and biological properties. In terrestrial ecosystems, the knowledge of the status of soil quality under different land use/cover can increase our understanding of processes related to soil functioning and help to properly managing ecosystems and increase their services. Conversion of the forest to rangelands is one of the most common forms of land use change having a significant effect on soil quality indicators. Here, we addressed the following objectives: (ii) to study the current status of soil physical, chemical and biological characteristics after more than thirty years of land use change from forest (dominated by Carpinus betulus and Parrotia persica) to rangeland, and (ii) to provide an overview of the spatial distributions of soil properties in forest and rangeland covers using a geostatistical method. For this, two sites (i.e., forest and rangeland) were selected in northern Iran. Within each site, 50 soil samples were collected at 0-10 cm depth along two sampling lines (250 m length) with a total of 100 soil samples for each site. Results showed that following the change of land use from forest to rangeland soil porosity, aggregate stability, pH, electrical conductivity and nutrient (i.e., total N and available P, K, Ca and Mg) contents increased, whereas soil bulk density and C/N ratio decreased. In addition, the population of soil biota (i.e., earthworms, acarina, collembola, nematode, protozoa, bacteria and fungi), microbial and enzyme activities decreased after more than thirty years of land use change from forest to rangeland. Principal component analysis confirmed that forest site had a more fertile soil and a higher biological activity than rangeland cover. Based on heat plots of soil properties, forest ecosystems created hot spots of soil quality indicators in the study area. Based on the geostatistical approach, most of the soil variables in the rangeland site followed a linear model, while in the forest site, most models were exponential and spherical. The fractal dimension values of the soil properties in the forest (1.62-1.99) had larger variations than in the rangeland (1.75-1.99) site. As a general conclusion, soil quality was not improved after more than thirty years of land use change from forest to rangeland, suggesting that degraded forest habitats should be restored by native tree species rather than converted to other land uses.

Latitudinal shifts of soil microbial biomass seasonality

Soil microbes ultimately drive the mineralization of soil organic carbon and thus ecosystem functions. We compiled a dataset of the seasonality of microbial biomass carbon (MBC) and developed a semi-mechanistic model to map monthly MBC across the globe. MBC exhibits an equatorially symmetric seasonality between the Northern and Southern Hemispheres. In the Northern Hemisphere, MBC peaks in autumn and is minimal in spring at low latitudes (<25°N), peaks in the spring and is minimal in autumn at mid-latitudes (25°N to 50°N), while peaks in autumn and is minimal in spring at high latitudes (>50°N). This latitudinal shift of MBC seasonality is attributed to an interaction of soil temperature, soil moisture, and substrate availability. The MBC seasonality is inconsistent with patterns of heterotrophic respiration, indicating that MBC as a proxy for microbial activity is inappropriate at this resolution. This study highlights the need to explicitly represent microbial physiology in microbial models. The interactive controls of environments and substrate on microbial seasonality provide insights for better representing microbial mechanisms in simulating ecosystem functions at the seasonal scale.

Soil Fauna of Ranibari Community Forest, Kathmandu, Nepal

Ranibari Community Forest (RCF) is the important forest patch present within the highly urbanized Kathmandu Valley with information gaps on soil fauna. This study aimed to explore the soil meso and macrofauna of the forest. Fourteen random quadrats (1 × 1 m2) were laid within seven blocks. Leaf litter samples and soil cores were collected, screened, sieved, and searched under a white sheet, once a fortnight from May to November 2019. The results showed that the diversity, abundance, and richness of soil fauna were the highest in the summer season (H´ = 2.897, abundance = 1,973, S = 84) dominated by Collembola. The Soil Biological Quality Index (QBS-ar) value was also found to be the highest in summer (QBS-ar = 417) and successively decreased in succeeding seasons. Soil fauna was diverse and evenly distributed in soil layers throughout the seasons, but the abundance was greater in leaf litters, particularly in summer. Fauna like Chilopoda, Diplopoda, Haplotaxida, and Isopoda were seen to be affected negatively by soil temperature in summer and autumn seasons. Soil moisture content was found to be positively correlated with immature insects, earthworms, and millipedes in the rainy and autumn seasons. Besides, the pH of the soil was seen to affect Diplura only in the autumn season. The relation of fauna with the physicochemical parameters (temperature, moisture, and pH) and also with other taxa showed their ecological roles and adaptation to a specific microclimate.

Plants-Derived Biomolecules as Potent Antiviral Phytomedicines: New Insights on Ethnobotanical Evidences against Coronaviruses

SARS-CoV-2 infection (COVID-19) is in focus over all known human diseases, because it is destroying the world economy and social life, with increased mortality rate each day. To date, there is no specific medicine or vaccine available against this pandemic disease. However, the presence of medicinal plants and their bioactive molecules with antiviral properties might also be a successful strategy in order to develop therapeutic agents against SARS-CoV-2 infection. Thus, this review will summarize the available literature and other information/data sources related to antiviral medicinal plants, with possible ethnobotanical evidence in correlation with coronaviruses. The identification of novel antiviral compounds is of critical significance, and medicinal plant based natural compounds are a good source for such discoveries. In depth search and analysis revealed several medicinal plants with excellent efficacy against SARS-CoV-1 and MERS-CoV, which are well-known to act on ACE-2 receptor, 3CLpro and other viral protein targets. In this review, we have consolidated the data of several medicinal plants and their natural bioactive metabolites, which have promising antiviral activities against coronaviruses with detailed modes of action/mechanism. It is concluded that this review will be useful for researchers worldwide and highly recommended for the development of naturally safe and effective therapeutic drugs/agents against SARS-CoV-2 infection, which might be used in therapeutic protocols alone or in combination with chemically synthetized drugs.