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An L, Lu X, Zhang P, Sun J, Cong B, Sa R, He D. Effects of continuous cropping on bacterial community diversity and soil metabolites in soybean roots. Front Microbiol 2025; 16:1534809. [PMID: 39996076 PMCID: PMC11847879 DOI: 10.3389/fmicb.2025.1534809] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2024] [Accepted: 01/20/2025] [Indexed: 02/26/2025] Open
Abstract
The alternating planting of corn and soybeans is regarded as an effective strategy in addressing the challenges faced in soybean cultivation. However, the precise mechanisms that control the bacterial microbiome in soybean roots in the soil, particularly in continuous cropping and rotational corn-soybean farming rotations, are remain unclear. This study employed both field and pot positioning experiments, using high-throughput and generic metabolomics sequencing techniques to explore the dynamics between soybean plants, root microflora, and soil metabolites, especially in the context of continuous cropping and fluctuating corn-soybean crop rotation. The process that included rotating corn soybeans significantly enhanced their grain yield, dry weight, soil nitrogen concentration, urease activity, as well as the accumulation of nitrogen, phosphorus, and potassium in various plant organs, compared to the traditional practice of continuous soybean cultivation. There is a significant reduction in the transit of bacterial operational taxonomic units (OTUs) from the rhizosphere to the endosphere through rhizoplane. The number of bacterial OTUs that are consumed and enriched on rhizoplane is greater than those that are enriched and absorbed in the endosphere. Continuous cropping practices significantly boost Burkholderiales, whereas chloroplast microorganisms significantly improve crop rotation techniques. Soil environmental factors, such as urease and accessible phosphorus, are crucial in establishing the relative prevalence of Rhodanobacter and other bacterial groups. Soil metabolites, such as benzyl alcohol, show a positive correlation with Cyanobacteria, while acidic compounds, such as D-arabinitol, are positively linked with Burkholderiales. This study indicates that the rotation of corn and soybean crops facilitates the growth of soybeans, increases nutrient accumulation in both plants and soil, enhances the presence of beneficial bacteria, and improves soybean yields.
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Affiliation(s)
- Liwei An
- Pratacultural College, Inner Mongolia Minzu University, Tongliao, China
| | - Xinnan Lu
- Agriculturalc College, Inner Mongolia Minzu University, Tongliao, China
| | - Pengyu Zhang
- Inner Mongolia Agronomy and Animal Husbandry Technology Extension Center, Hohhot, China
| | - Jiayao Sun
- Tongliao Institute of Agricultural and Animal Husbandry Sciences, Tongliao, China
| | - Baiming Cong
- Tongliao Institute of Agricultural and Animal Husbandry Sciences, Tongliao, China
| | - Rula Sa
- Pratacultural College, Inner Mongolia Minzu University, Tongliao, China
| | - Dexin He
- Agriculturalc College, Inner Mongolia Minzu University, Tongliao, China
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Šidlauskaitė G, Toleikienė M, Kadžiulienė Ž. Comparison of Productivity and Quality of Three Perennial Ryegrass Cultivars and Their Mixture in Response to Nitrogen Fertilization and Grass-Legume Mixtures. PLANTS (BASEL, SWITZERLAND) 2024; 13:3130. [PMID: 39599339 PMCID: PMC11597372 DOI: 10.3390/plants13223130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2024] [Revised: 10/17/2024] [Accepted: 11/05/2024] [Indexed: 11/29/2024]
Abstract
We conducted a four-year cutting experiment on herbage yield, with three years focused on testing the effect of perennial ryegrass (PR) cultivars 'Elena DS', 'Raminta', and 'Verseka', along with a cultivar mixture and compositions with white clover (WC) and red clover (RC) diversity, on crude protein (CP), modified acid detergent fibre (MADF), neutral detergent fibre (NDF), water-soluble carbohydrates (WSC), and dry matter digestibility (DMD) content. PR cultivars and cultivar mixtures were sown alone (N150), and the PR 'Elena DS' and PR cultivar mixtures were also sown with each WC, or WC and RC (N0). The average four-year herbage productivity was the lowest in PR 'Elena DS' the and cultivar mixture/WC, followed by all of the pure PR swards, and the highest in PR 'Elena DS' and the cultivar mixture/WC+RC; however, the PR 'Elena DS'/WC+RC mixture had the highest legume proportion and CP content. There was less NDF but also WSC in swards with legumes, but higher CP content than in pure PR swards; however, the highest CP content was in mixtures with RC. Among the grasses, PR 'Verseka' had lower NDF contents and a higher WSC than PR 'Elena DS', 'Raminta', and the cultivar mixture. Overall, this study revealed significant differences in the productivity of PR cultivars with a potential yield difference of up to 1.7 t ha-1.
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Affiliation(s)
- Gintarė Šidlauskaitė
- Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Instituto al. 1, Kėdainiai District, LT-58344 Akademija, Lithuania; (M.T.); (Ž.K.)
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Kenmotsu H, Masuma T, Murakami J, Hirose Y, Eki T. Distinct prokaryotic and eukaryotic communities and networks in two agricultural fields of central Japan with different histories of maize-cabbage rotation. Sci Rep 2023; 13:15435. [PMID: 37723228 PMCID: PMC10507100 DOI: 10.1038/s41598-023-42291-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Accepted: 09/07/2023] [Indexed: 09/20/2023] Open
Abstract
Crop rotation is an important agricultural practice for homeostatic crop cultivation. Here, we applied high-throughput sequencing of ribosomal RNA gene amplicons to investigate soil biota in two fields of central Japan with different histories of maize-cabbage rotation. We identified 3086 eukaryotic and 17,069 prokaryotic sequence variants (SVs) from soil samples from two fields rotating two crops at three different growth stages. The eukaryotic and prokaryotic communities in the four sample groups of two crops and two fields were clearly distinguished using β-diversity analysis. Redundancy analysis showed the relationships of the communities in the fields to pH and nutrient, humus, and/or water content. The complexity of eukaryotic and prokaryotic networks was apparently higher in the cabbage-cultivated soils than those in the maize-cultivated soils. The node SVs (nSVs) of the networks were mainly derived from two eukaryotic phyla: Ascomycota and Cercozoa, and four prokaryotic phyla: Pseudomonadota, Acidobacteriota, Actinomycetota, and Gemmatimonadota. The networks were complexed by cropping from maize to cabbage, suggesting the formation of a flexible network under crop rotation. Ten out of the 16 eukaryotic nSVs were specifically found in the cabbage-cultivated soils were derived from protists, indicating the potential contribution of protists to the formation of complex eukaryotic networks.
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Affiliation(s)
- Harutaro Kenmotsu
- Department of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan
| | - Tomoro Masuma
- Department of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan
| | - Junya Murakami
- Department of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan
| | - Yuu Hirose
- Department of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan
- Research Center for Agrotechnology and Biotechnology, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan
| | - Toshihiko Eki
- Department of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan.
- Research Center for Agrotechnology and Biotechnology, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi, 441-8580, Japan.
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Dynamic of the Soil Microbiota in Short-Term Crop Rotation. Life (Basel) 2023; 13:life13020400. [PMID: 36836761 PMCID: PMC9961364 DOI: 10.3390/life13020400] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 12/27/2022] [Accepted: 01/06/2023] [Indexed: 02/04/2023] Open
Abstract
Crop rotation is one of the oldest and most effective methods of restoring soil fertility, which declines when the same plant is grown repeatedly. One of the reasons for a reduction in fertility is the accumulation of pathogenic and unfavorable microbiota. The modern crop rotation schemes (a set of plant species and their order in the crop rotation) are highly effective but are designed without considering soil microbiota dynamics. The main goal of this study was to perform a short-term experiment with multiple plant combinations to access the microbiological effects of crop rotation. It could be useful for the design of long-term crop rotation schemes that take the microbiological effects of the crop rotation into account. For the analysis, five plants (legumes: vetch, clover, and cereals: oats, wheat, and barley) were used. These five plants were separately grown in pots with soil. After the first phase of vegetation, the plants were removed from the soil and a new crop was planted. Soil samples from all 25 possible combinations of primary and secondary crops were investigated using v4-16S rDNA gene sequencing. It was shown that the short-term experiments (up to 40 days of growing) are effective enough to find microbial shifts in bulk soil from different plants. Both primary and secondary cultures are significant factors for the microbial composition of microbial soil communities. Changes are the most significant in the microbial communities of vetch soils, especially in the case of vetch monoculture. Growing clover also leads to changes in microbiota, especially according to beta-diversity. Data obtained can be used to develop new crop rotation schemes that take into account the microbiological effects of various crops.
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Adagbasa EG, Mukwada G. Mapping vegetation species succession in a mountainous grassland ecosystem using Landsat, ASTER MI, and Sentinel-2 data. PLoS One 2022; 17:e0256672. [PMID: 35081107 PMCID: PMC8791488 DOI: 10.1371/journal.pone.0256672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Accepted: 11/25/2021] [Indexed: 01/12/2023] Open
Abstract
Vegetation species succession and composition are significant factors determining the rate of ecosystem biodiversity recovery after being disturbed and subsequently vital for sustainable and effective natural resource management and biodiversity. The succession and composition of grasslands ecosystems worldwide have significantly been affected by accelerated environmental changes due to natural and anthropogenic activities. Therefore, understanding spatial data on the succession of grassland vegetation species and communities through mapping and monitoring is essential to gain knowledge on the ecosystem and other ecosystem services. This study used a random forest machine learning classifier on the Google Earth Engine platform to classify grass vegetation species with Landsat 7 ETM+ and ASTER multispectral imager (MI) data resampled with the current Sentinel-2 MSI data to map and estimate the changes in vegetation species succession. The results indicate that ASTER MI has the least accuracy of 72%, Landsat 7 ETM+ 84%, and Sentinel-2 had the highest of 87%. The result also shows that other species had replaced four dominant grass species totaling about 49 km2 throughout the study.
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Affiliation(s)
- Efosa Gbenga Adagbasa
- Department of Geography, University of the Free State, Bloemfontein, South Africa
- * E-mail:
| | - Geofrey Mukwada
- Department of Geography, University of the Free State, Bloemfontein, South Africa
- Afromontane Research Unit, University of the Free State, Bloemfontein, South Africa
- Department of Geography, W.A. Franke College of Forestry & Conservation of the University of Montana, Missoula, Montana, United States of America
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Liu C, Yang M, Hou Y, Xue X. Ecosystem service multifunctionality assessment and coupling coordination analysis with land use and land cover change in China's coastal zones. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 797:149033. [PMID: 34303237 DOI: 10.1016/j.scitotenv.2021.149033] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Revised: 07/09/2021] [Accepted: 07/09/2021] [Indexed: 06/13/2023]
Abstract
Ecosystem services (ESs) have received widespread attention worldwide for their potential to solve sustainability issues. However, extensive land use and land cover change (LUCC) driven by human activities has raised concerns regarding its impacts on ESs, especially in coastal zones. More importantly, spatial-temporal changes, their coupling relationships with LUCC, and their underlying drivers have not been thoroughly analyzed. This study focuses on China's coastal zones to investigate the spatial-temporal changes of ecosystem service multifunctionality (ESM) from 2000 to 2018. Coupling coordination degree (CCD) analysis of the relationship between ESM and comprehensive intensity of land use was applied to identify coastal cities with low-level coordination and their main drivers in 2018. The results show that: (1) the proportion with high levels of ESM decreased by 1.01% from 2000 to 2010 and then increased by 3.29% from 2010 to 2018; (2) the ESM of China's coastal zones present significant spatial heterogeneity, and the low levels of ESM are mainly distributed in the north and urban areas, while most areas in the southern coastal zones have high levels of ESM; (3) forest land is the leading land cover type for ESM, and China's forest conservation policies significantly contribute to the increase in ESM; (4) the CCD of most cities in the southern coastal zones, apart from Shanghai and the Pearl River Delta, is at a relatively high level and experiences no significant changes, while most cities in the northern coastal zones display an improving trend; (5) the land use type, landform type, and leaf area index are the determinants of ESM, and the annual average temperature, population density, and surface elevation are the greatest influences on the CCD. The findings of this study can inform ecological conservation and landscape planning and are beneficial to the sustainable development of coastal zones in China.
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Affiliation(s)
- Chao Liu
- Coastal and Ocean Management Institute, Xiamen University, 361102, China; College of the Environment & Ecology, Xiamen University, 361102, China
| | - Minghui Yang
- International Business School, Guangzhou City University of Technology, 510800, China; Research Centre of Accounting and Economic Development for Guangdong-Hong Kong-Macau Bay Area, Guangdong University of Foreign Studies, 510006, China; Faculty of Informatics and Management, University of Hradec Kralove, Hradec Kralove, 50003, Czech Republic
| | - Yuting Hou
- Coastal and Ocean Management Institute, Xiamen University, 361102, China; College of the Environment & Ecology, Xiamen University, 361102, China
| | - Xiongzhi Xue
- Coastal and Ocean Management Institute, Xiamen University, 361102, China; College of the Environment & Ecology, Xiamen University, 361102, China; Fujian Institute for Sustainable Oceans, Xiamen University, 361102, China.
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