When dewatered swine manure-derived biochar meets swine wastewater in anaerobic digestion: A win-win scenario towards highly efficient energy recovery and antibiotic resistance genes attenuation for swine manure management

Current perspectives on microalgae and extracellular polymers for reducing antibiotic resistance genes in livestock wastewater

Antibiotic resistance genes (ARGs) in livestock wastewater resulting from excessive antibiotics used in animal farming pose significant environmental and public health risks. Conventional treatment methods are often costly, inefficient, and may inadvertently promote ARG transmission. Microalgae, with their long genetic distance from bacteria and strong ability to utilize wastewater nutrients, offer a sustainable solution for ARG mitigation. This review studied the abundance and characterization of ARGs in livestock wastewater, highlighted microalgal-based removal mechanisms of ARGs, including phagocytosis, competition, and absorption by extracellular polymeric substances (EPS), and explored factors influencing their efficacy. Notably, the microalgae-EPS system reduced ARGs by 0.62-3.00 log, demonstrating significant potential in wastewater treatment. Key challenges, such as optimizing algal species, understanding EPS-ARG interactions, targeted reduction of host bacteria, and scaling technologies, were discussed. This work provides critical insights for advancing microalgal-based strategies for ARG removal, promoting environmentally friendly and efficient wastewater management.

Biochar-assisted control of antibiotic-resistant bacteria and methane yield optimization in two-stage anaerobic digestion under organic load and antibiotic stress

This study explores the interactions between microbial communities, antibiotic resistance, and biogas production in anaerobic digestion systems, focusing on the acidogenic (AP) and methanogenic (MP) phases under varying organic loads, cefazolin (CEZ) exposure, and biochar supplementation. High organic loading (10 g/L glucose) significantly suppressed CEZ-resistant bacteria (CEZ-r) during the AP phase. However, their abundance markedly rebounded in MP, rising from 0.30 % to 36.28 % in control, indicating phase-specific dynamics. CEZ residues increased CEZ-r by 2.49 % and 9.30 % at 0 and 5 g/L glucose during AP. Although AP suppressed CEZ-r to 0.23 % in the CEZ-added reactor at 10 g/L glucose, MP rebounded CEZ-r to 8.30 %. In addition, CEZ exposure reduced methane yields by up to 28.14 %, likely due to the suppression of Methanosaetaceae and impaired acetic acid conversion. In contrast, biochar addition effectively reduced CEZ-r abundance to below 1.00 % at moderate to high organic loads and alleviated CEZ-induced inhibition on methane production. Biochar also enhanced Methanosaetaceae abundance (up to +6.55 %) compared to the control and promoted more efficient substrate utilization, possibly by facilitating direct interspecies electron transfer. These findings emphasize the role of organic load and digestion phase in shaping antibiotic resistance and system performance. Furthermore, biochar addition effectively mitigates the negative impacts of antibiotic residues, stabilizes microbial communities, and enhances biogas production.

Anaerobic digestion and biochar/hydrochar enhancement of antibiotic-containing wastewater: Current situation, mechanism and future prospects

The increasing consumption of antibiotics by humans and animals and their inappropriate disposal have increased antibiotic load in municipal and pharmaceutical industry waste, resulting in severe public health risks worldwide. Anaerobic digestion (AD) is the main force of antibiotic-containing wastewater treatment, and the adaptability of biochar/hydrochar (BC/HC) makes it an attractive addition to AD systems, which aim to promote methane production efficiency. Nevertheless, further studies are needed to better understand the multifaceted function of BC/HC and its role in antibiotic-containing wastewater AD. This review article examines the current status of AD of antibiotic-containing wastewater and the effects of different preparation conditions on the physicochemical properties of BC/HC and AD status. The incorporation of BC/HC into the AD process has several potential benefits, contingent upon the physical and chemical properties of BC/HC. These benefits include mitigation of antibiotic toxicity, establishment of a stable system, enrichment of functional microorganisms and enhancement of direct interspecies electron transfer. The mechanism by which BC/HC enhances the AD of antibiotic-containing wastewater, with focus on microbial enhancement, was analysed. A review of the literature revealed that the challenge of optimization and process improvement must be addressed to enhance efficiency and clarify the mechanism of BC/HC in the AD of antibiotic-containing wastewater. This review aims to provide significant insights and details into the BC/HC-enhanced AD of antibiotic-containing wastewater.

Geobatteries in environmental biogeochemistry: Electron transfer and utilization

The efficiency of direct electron flow from electron donors to electron acceptors in redox reactions is significantly influenced by the spatial separation of these components. Geobatteries, a class of redox-active substances naturally present in soil-water systems, act as electron reservoirs, reversibly donating, storing, and accepting electrons. This capability allows the temporal and spatial decoupling of redox half-reactions, providing a flexible electron transfer mechanism. In this review, we systematically examine the critical role of geobatteries in influencing electron transfer and utilization in environmental biogeochemical processes. Typical redox-active centers within geobatteries, such as quinone-like moieties, nitrogen- and sulfur-containing groups, and variable-valent metals, possess the potential to repeatedly charge and discharge. Various characterization techniques, ranging from qualitative methods like elemental analysis, imaging, and spectroscopy, to quantitative techniques such as chemical, spectroscopic, and electrochemical methods, have been developed to evaluate this reversible electron transfer capacity. Additionally, current research on the ecological and environmental significance of geobatteries extends beyond natural soil-water systems (e.g., soil carbon cycle) to engineered systems such as water treatment (e.g., nitrogen removal) and waste management (e.g., anaerobic digestion). Despite these advancements, challenges such as the complexity of environmental systems, difficulties in accurately quantifying electron exchange capacity, and scaling-up issues must be addressed to fully unlock their potential. This review underscores both the promise and challenges associated with geobatteries in responding to environmental issues, such as climate change and pollutant transformation.

Livestock and poultry breeding farms as a fixed and underestimated source of antibiotic resistance genes

The excessive use of antibiotics, disinfectants, and drugs in livestock and poultry breeding has resulted in a rise in the presence of antibiotic resistance genes (ARGs). Antibiotic-resistant bacteria (ARB) and ARGs have been widely found in animal feces, farm wastewater, and farm air. ARGs can not only spread across media through adsorption and migration, but also transfer resistance across bacterial genera through horizontal gene transfer. Livestock breeding has become a fixed and unavoidable source of ARGs in the environment. Existing technologies for controlling ARGs, such as composting, disinfection, and sewage treatment, are not efficient in removing ARB and ARGs from waste. Furthermore, the remaining ARGs still possess a strong capacity for dissemination. At present, antibiotics used in animal husbandry are difficult to replace in a short period of time. The growth and potential risks of resistance genes in livestock and poultry breeding sources in the receiving environment are not yet clear. In this paper, we summarize the current situation of ARGs in the livestock and poultry breeding environment. We also explain the key environmental processes, main influencing factors, and corresponding ecological risks associated with ARGs in this environment. The advantages and disadvantages of current technologies for the removal of ARGs are primarily discussed. There is a particular emphasis on clarifying the spatiotemporal evolution patterns and environmental process mechanisms of ARGs, as well as highlighting the importance and urgency of developing efficient pollution control technologies.

An overview of the occurrence, impact of process parameters, and the fate of antibiotic resistance genes during anaerobic digestion processes

Antibiotic resistance genes (ARGs) have emerged as a significant global health threat, contributing to fatalities worldwide. Wastewater treatment plants (WWTPs) and livestock farms serve as primary reservoirs for these genes due to the limited efficacy of existing treatment methods and microbial adaptation to environmental stressors. Anaerobic digestion (AD) stands as a prevalent biological treatment for managing sewage sludge and manure in these settings. Given the agricultural utility of AD digestate as biofertilizers, understanding ARGs' fate within AD processes is essential to devise effective mitigation strategies. However, understanding the impact of various factors on ARGs occurrence, dissemination, and fate remains limited. This review article explores various AD treatment parameters and correlates to various resistance mechanisms and hotspots of ARGs in the environment. It further evaluates the dissemination and occurrence of ARGs in AD feedstocks and provides a comprehensive understanding of the fate of ARGs in AD systems. This review explores the influence of key AD parameters such as feedstock properties, pretreatments, additives, and operational strategies on ARGs. Results show that properties such as high solid content and optimum co-digestion ratios can enhance ARG removal, while the presence of heavy metals, microplastics, and antibiotics could elevate ARG abundance. Also, operational enhancements, such as employing two-stage digestion, have shown promise in improving ARG removal. However, certain pretreatment methods, like thermal hydrolysis, may exhibit a rebounding effect on ARG levels. Overall, this review systematically addresses current challenges and offers future perspectives associated with the fate of ARGs in AD systems.

Multi-criteria-based decision-making assessment for anaerobic digestion of ammonia-rich distillery wastewater: Effect of pyrochar and temperature

Energy-efficient wastewater treatment units are imperative to achieve carbon neutrality and a circular economy at the industrial scale. In the present study, pyrochar loading and digestion temperature were tested to assess their impact on the performance of an anaerobic digester running on distillery wastewater. The digestion temperature (37 °C and 55 °C) and pyrochar loading (7.5 - 30 g/L.feed) were selected as two primary design factors. Experiments were designed using Taguchi's design of experiments and specific methane yield, total ammonia nitrogen, pH and buffering capacity were selected as experimental outputs for multi-criteria assessment. The results from the confirmation test indicated that the addition of pyrochar (7.5 g/Lfeed) improved the methane yield (276 ± 15 L/kg VS) significantly compared to the control (167 ± 15 L/kg VS) at 37 °C. The detailed post-digestion analysis showed that the adsorption of ammonia on pyrochar may be the primary reason for enhanced digester performance.

Mechanistic insights into synergistic facilitation of copper/zinc ions and dewatered swine manure-derived biochar on anaerobic digestion of swine wastewater

Biochar-assisted anaerobic digestion (AD) has been proposed an advanced system for swine wastewater (SW) management. However, the effects of metallic nutrients in SW, such as copper/zinc ions (Cu2+/Zn2+), on the biochar-assisted AD of SW are not well understood. This study investigated the influences of individual Cu2+/Zn2+ or dewatered swine manure-derived biochar, as well as their combined additions, on the AD of SW. The results showed that exposure to 50 mg/L Cu2+/Zn2+ temporary inhibited methane production, but the addition of 20 g/L biochar alleviated this inhibition by shortening the methanogenic lag time and increasing methane yield. Following a period of acclimation, both Cu2+/Zn2+ and biochar promoted methane production, although metagenomic analysis revealed distinct mechanisms underlying their promotion. Cu2+/Zn2+ enhanced ATP processing, including electron exchange between NADH/NAD+ and succinate/fumarate transformation, by 26.0-35.8%. Additionally, the gene encoding Coenzyme M methylation was upregulated by 36.2% along with enrichments of Methanocullus and Methanosarcina, contributing to accelerated hydrolysis and methanogenesis rates by 54.7% and 44.8%, respectively. On the other hand, biochar mainly stimulated bacterial F-type ATPase activities by 28.4%, likely facilitating direct interspecies electron transfer between Geobacter and Methanosarcina for syntrophic methanogenesis. The combined addition of Cu2+/Zn2+ and biochar resulted in "win-win" benefits, significantly increasing the maximum methane production rate from 40.3 mL CH4/d to 53.7 mL CH4/d. Moreover, the introduction of biochar into AD of SW facilitated the transformation of more Cu2+/Zn2+ from a reducible Fe-Mn oxides form to a residual form, which potentially reduced the metallic toxicity of the digestate for soil amendment. The findings of this study provide novel insights into understanding the synergistic impacts of heavy metals and biochar in regulating SW during AD, as well as the management of associated digestate.

A thematic review on livestock manure treatment strategies focusing on thermochemical conversion

Livestock manure (LSM) management is emerging as a challenge due to increasing livestock consumption. Owing to the decreased agricultural land area, it is necessary to ensure LSM utilization in non-agricultural fields. LSM can be a valuable resource if managed as a circulating resource. This study discusses research trends based on a literature review and classifies LSM treatments. The analysis of each treatment is presented according to research trends, and implications for the future LSM processing are discussed. "Biological treatment" accounted for the largest portion at 48%, "manure management," which suggests improvement in manure treatment through systematic thinking or LSM management practices, accounted for 16%, and "thermochemical conversion" accounted for 11%. In addition, "life cycle assessment (LCA) research," "solid-liquid separation approach," and "nutrient-recovery/losses" were derived. Studies on biological treatments are increasing. Although anaerobic digestion (AD) is the most used method, it has the disadvantages of long processing time and waste generation after processing. As a key supplement, thermochemical conversion (TCC) technology, which could overcome the disadvantages of AD, was reviewed.

Biochar facilitates methanogens evolution by enhancing extracellular electron transfer to boost anaerobic digestion of swine manure under ammonia stress

This study explored the mechanisms by which biochar mitigates ammonia inhibition in anaerobic digestion (AD) of swine manure. Findings show 2-8 g/L exogenous ammonia dosages gradually inhibited AD, leading to decreases in the efficiencies of hydrolysis, acidogenesis and methanogenesis by 3.4-70.8%, 6.0-82.0%, and 4.9-93.8%, respectively. However, biochar addition mitigated this inhibition and facilitated methane production. Biochar enhanced microbial activities related to electron transport and extracellular electron transfer. Moreover, biochar primarily enriched Methanosarcina, which, consequently, upregulated the genes encoding formylmethanofuran dehydrogenase and methenyltetrahydromethanopterin cyclohydrolase for the CO2-reducing methanogenesis pathway by 26.9-40.8%. It is believed that biochar mediated direct interspecies electron transfer between syntrophic partners, thereby enhancing methane production under ammonia stress. Interestingly, biochar removal did not significantly impact the AD performance of the acclimated microbial community. This indicated the pivotal role of biochar in triggering methanogen evolution to mitigate ammonia stress rather than the indispensable function after the enrichment of ammonia-resistance methanogen.

Stimulating anaerobic digestion to degrade recalcitrant organic pollutants: Potential role of conductive materials-led direct interspecies electron transfer

This review aims to provide a comprehensive understanding of the potential of CMs-dominated DIET in the degradation of recalcitrant organic pollutants in AD. The review covers the mechanisms and efficiencies of recalcitrant organic pollutant degradation by CMs-dominated DIET, the comparison of degradation pathways between DIET and chemical treatment, recent insights on DIET-enhanced degradation, and the evaluation of the potential and future development of CMs-dominated DIET. The review emphasizes the importance of coupled syntrophic microorganisms, electron flux, and physicochemical properties of CMs in enhancing the degradation performance of AD. Additionally, it highlights the advantages of DIET-led syntrophic metabolism over traditional oxidation technologies in terms of environmental friendliness and efficiency. Finally, the review acknowledges the potential risks associated with introducing CMs into AD systems and provides guidance for waste treatment and energy recovery.

Occurrence and transformation of heavy metals during swine waste treatment: A full scale study

This study tracked the fate of nine detected heavy metals in an industrial swine farm with integrated waste treatment, including anoxic stabilization, fixed-film anaerobic digestion, anoxic-oxic (A/O), and composting. Results show that heavy metals exhibited different transformation behaviors in the treatment streamline with Fe, Zn, Cu and Mn as the most abundant ones in raw swine waste. The overall removal of water-soluble heavy metals averaged at 30 %, 24 % and 42 % by anoxic stabilization, anaerobic digestion and A/O unit, respectively. In particular, anoxic stabilization could effectively remove Cu, Mn and Ni; while A/O unit was highly effective for Fe, Cr and Zn elimination from water-soluble states. As such, the environmental risk of liquid products for agricultural irrigation decreased gradually to the safe pollution level in swine waste treatment. Furthermore, heavy metals in the solid (slurry) phase of these bioprocesses could be immobilized with the passivation rate in the range of 42-70 %. Nevertheless, heavy metals preferably transformed from liquid to biosolids to remain their environmental risks when biosolids were used as organic fertilizer in agriculture, thereby requiring effective strategies to advance their passivation in all bioprocesses, particularly composting as the last treatment unit.

Pilot-scale investigation of conductive carbon cloth amendment for enhancing high-solids anaerobic digestion and mitigating antibiotic resistance

This study examined the effectiveness of introducing conductive carbon cloth into a pilot-scale high-solids anaerobic digestion (HSAD) system. Adding carbon cloth increased methane production by 22 % and improved the maximum methane production rate by 39 %. Microbial community characterization indicated a possible direct interspecies electron transfer-based syntrophic association among microbes. Using carbon cloth also enhanced microbial richness, diversity, and evenness. Carbon cloth effectively reduced the total abundance of antibiotic resistance genes (ARGs) by 44.6 %, mainly by inhibiting horizontal gene transfer, as shown by the significant decrease in the relative abundance of integron genes (particularly intl1). The multivariate analysis further demonstrated strong correlations of intl1 with most of the targeted ARGs. These findings suggest that carbon cloth amendment can promote efficient methane production and attenuate the spread of ARGs in HSAD systems.

A review of the impact of conductive materials on antibiotic resistance genes during the anaerobic digestion of sewage sludge and animal manure

The urgent need to reduce the environmental burden of antibiotic resistance genes (ARGs) has become even more apparent as concerted efforts are made globally to tackle the dissemination of antimicrobial resistance. Concerning levels of ARGs abound in sewage sludge and animal manure, and their inadequate attenuation during conventional anaerobic digestion (AD) compromises the safety of the digestate, a nutrient-rich by-product of AD commonly recycled to agricultural land for improvement of soil quality. Exogenous ARGs introduced into the natural environment via the land application of digestate can be transferred from innocuous environmental bacteria to clinically relevant bacteria by horizontal gene transfer (HGT) and may eventually reach humans through food, water, and air. This review, therefore, discusses the prospects of using carbon- and iron-based conductive materials (CMs) as additives to mitigate the proliferation of ARGs during the AD of sewage sludge and animal manure. The review spotlights the core mechanisms underpinning the influence of CMs on the resistome profile, the steps to maximize ARG attenuation using CMs, and the current knowledge gaps. Data and information gathered indicate that CMs can profoundly reduce the abundance of ARGs in the digestate by easing selective pressure on ARGs, altering microbial community structure, and diminishing HGT.

Biochar-assisted anaerobic membrane bioreactor towards high-efficient energy recovery from swine wastewater: Performances and the potential mechanisms

A high-efficient energy recovery system of biochar-assisted anaerobic membrane bioreactor (BC-AnMBR) was established for swine wastewater treatment. Comparing with a conventional AnMBR, biochar addition accelerated volatile fatty acids (VFA) degradation during start-up stage, thereby shortened start-up duration by 44.0 %. Under a high organic loading rate (OLR) of 21.1 gCOD/L/d, BC-AnMBR promoted COD removal efficiency from 90.1 % to 95.2 %, and maintained a high methane production rate of 4.8L CH₄/L/d. The relative abundance of Methanosaeta declined from 53.9 % in conventional AnMBR to 21.0 % in BC-AnMBR, whereas that of Methanobrevibacter dramatically increased from 10.3 % to 70.9 %, respectively. Metabolic pathway analysis revealed that biochar not only strengthened hydrogenotrophic methanogenesis pathway, but also upregulated the genes encoding electron transfer carriers and riboflavin metabolism, suggesting the role of biochar facilitating direct interspecies electron transfer for syntrophic methanogenesis. The excellent energy yield performances under high OLR confirmed BC-AnMBR as an advanced system for high-strength swine wastewater treatment.

Enhanced energy production and biological treatment of swine wastewater using anaerobic membrane bioreactor: Fouling mechanism and microbial community

This study aimed to reveal the membrane fouling mechanisms during anaerobic membrane bioreactor (AnMBR) operation for swine wastewater treatment under different organic loading rates (OLR). Results showed that AnMBR could achieve high pollutant removal (71.9-83.6 %) and energy recovery (0.18-0.23 L-CH₄/g-COD) at an OLR range of 0.25-0.5 g-COD/g-VSS.d, realizing energy production. However, higher OLR would aggravate the membrane fouling due to accumulation of fine sludge particles, organic foulants, and extracellular polymeric substances (EPS) on cake layer. Based on the high-throughput sequencing, microbial communities significantly changed and fouling-causing bacteria (e.g. Pseudomonas, Methanosarcina and Methanothrix) enriched in the cake layer at higher OLR conditions, leading to lower membrane permeability. Backwash can effectively remove the cake layer from the membrane surface and recover membrane permeability. The present study provides important information about membrane fouling and microbial information that could have significant impact on large-scale AnMBR application.

Electron shuttles enhanced the removal of antibiotics and antibiotic resistance genes in anaerobic systems: A review

The environmental and epidemiological problems caused by antibiotics and antibiotic resistance genes have attracted a lot of attention. The use of electron shuttles based on enhanced extracellular electron transfer for anaerobic biological treatment to remove widespread antibiotics and antibiotic resistance genes efficiently from wastewater or organic solid waste is a promising technology. This paper reviewed the development of electron shuttles, described the mechanism of action of different electron shuttles and the application of enhanced anaerobic biotreatment with electron shuttles for the removal of antibiotics and related genes. Finally, we discussed the current issues and possible future directions of electron shuttle technology.

The effects of biochar on antibiotic resistance genes (ARGs) removal during different environmental governance processes: A review

Antibiotic resistance genes (ARGs) pollution has been considered as one of the most significant emerging environmental and health challenges in the 21st century, many efforts have been paid to control the proliferation and dissemination of ARGs in the environment. Among them, the biochar performs a positive effect in reducing the abundance of ARGs during different environmental governance processes and has shown great application prospects in controlling the ARGs. Although there are increasing studies on employing biochar to control ARGs, there is still a lack of review paper on this hotspot. In this review, firstly, the applications of biochar to control ARGs in different environmental governance processes were summarized. Secondly, the processes and mechanisms of ARGs removal promoted by biochar were proposed and discussed. Then, the effects of biochar properties on ARGs removal were highlighted. Finally, the future prospects and challenges of using biochar to control ARGs were proposed. It is hoped that this review could provide some new guidance for the further research of this field.

Biochar can mitigate co-selection and control antibiotic resistant genes (ARGs) in compost and soil

Heavy metals (HMs) contamination raises the expression of antibiotic resistance (AR) in bacteria through co-selection. Biochar application in composting improves the effectiveness of composting and the quality of compost. This improvement includes the elimination and reduction of antibiotic resistant genes (ARGs). The use of biochar in contaminated soils reduces the bioaccessibility and bioavailability of the contaminants hence reducing the biological and environmental toxicity. This decrease in contaminant bioavailability reduces contaminants induced co-selection pressure. Conditions which favour reduction in HMs bioavailable fraction (BF) appear to favour reduction in ARGs in compost and soil. Biochar can prevent horizontal gene transfer (HGT) and can eliminate ARGs carried by mobile genetic elements (MGEs). This effect reduces maintenance and propagation of ARGs. Firmicutes, Proteobacteria, and Actinobacteria are the major bacteria phyla identified to be responsible for dissipation, maintenance, and propagation of ARGs. Biochar application rate at 2-10% is the best for the elimination of ARGs. This review provides insight into the usefulness of biochar in the prevention of co-selection and reduction of AR, including challenges of biochar application and future research prospects.

Enhanced methane production coupled with livestock wastewater treatment using anaerobic membrane bioreactor: Performance and membrane filtration properties

The present study introduced a new method for enhanced biomethane production and pollution control of swine wastewater (SW) using anaerobic membrane bioreactor (AnMBR). Results confirmed 35 °C as the optimum temperature for enhanced anaerobic digestion which resulted in relatively higher methane production rate and potential. In AnMBR system, robust pollutants removal and conversion rate were achieved under various hydraulic retention time (HRT) ranging from 20 to 10 days, while the highest methane yield (0.24 L/g-COD_removed) and microbial activity (6.65 mg-COD/g-VSS·h) were recorded at HRT of 15 days. Reduction of HRT to 10 days resulted in serious membrane fouling due to accumulation of extracellularpolymericsubstances(EPS) and cake layer on the membrane. However, cake layer as the dominant membrane foulant could be effectively removed through periodic physical backwash to recover the membrane permeability. Overall, the suggested AnMBR is a promising technology to enhance SW treatment and energy recovery.