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Zhang Q, Yang Y, Yang W, Li M, Zheng F, Zeng X, Deng X, Zou D, Zeng Q. Synergistic effects of rhizosphere microbial communities and low molecular weight organic acids on Cd accumulation in Helianthus annuus L. in low-to-moderate cadmium-contaminated farmland. JOURNAL OF HAZARDOUS MATERIALS 2025; 491:137983. [PMID: 40120276 DOI: 10.1016/j.jhazmat.2025.137983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2025] [Revised: 03/08/2025] [Accepted: 03/15/2025] [Indexed: 03/25/2025]
Abstract
Helianthus annuus L. (oil sunflower) is ideal candidate for phytoremediation of cadmium (Cd)-contaminated soil. To understand the relationship between the Cd accumulation in oil sunflower and its associated rhizosphere bacteria and root endophytic bacteria, this paper discussed the rhizosphere microecological characteristics and Cd accumulation of oil sunflower in various low-moderate Cd-contaminated farmlands. Low-molecular-weight organic acids in rhizosphere soil synergistically promoted Cd absorption by roots: tartaric acid (acidic soils > 2 mg kg-1, alkaline soil < 1 mg kg-1) played a direct role, while oxalic, lactic, and succinic acids indirectly affected Cd absorption through regulating available P (increase rate: 4.73-31.63 %). Organic acids and available P also affect rhizosphere bacteria (e.g., norank Acidobacteria Gp3) and root endophytic bacteria (e.g., norank Candidatus Saccharibacteria), further enhancing Cd absorption. Soil pH had a greater impact on root endophytic bacterial communities than Cd concentration. Although Cd concentrations (all > 2 mg kg-1) and bioaccumulation factors (BCF > 3) in roots, stems, and leaves were significantly higher in acidic soils than in alkaline soil (Cd < 1 mg kg-1, BCF < 1), the Cd concentration in oil remained below food safety standards. Thus, oil sunflower is more suitable for the phytoremediation of low-moderate Cd-contaminated acidic soils.
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Affiliation(s)
- Qiuguo Zhang
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
| | - Yang Yang
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China.
| | - Wenjun Yang
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
| | - Mingming Li
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
| | - Feiyu Zheng
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
| | - Xinyi Zeng
- School of Life Science, Jinggangshan University, Ji'an, Jiangxi 343009, PR China
| | - Xiao Deng
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
| | - Dongsheng Zou
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
| | - Qingru Zeng
- College of Environment and Ecology, Hunan Agricultural University, Changsha, Hunan 410128, PR China; Key Laboratory for Rural Ecosystem Health in Dongting Lake Area of Hunan Province, Changsha 410128, PR China; Yuelushan Laboratory, Changsha, Hunan 410128, PR China
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Zhang X, Zhang C, Liu Y, Huo L, Yang Z, Tong Y, Zhang X, Yu Z, Yang X, Cao Q, Dong Q. Effects of planting patterns on physicochemical properties, metabolites and microbial community structure of rhizosphere soil in perennial cultivated grassland. Sci Rep 2025; 15:12047. [PMID: 40199986 PMCID: PMC11978768 DOI: 10.1038/s41598-025-94366-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2024] [Accepted: 03/13/2025] [Indexed: 04/10/2025] Open
Abstract
Establishing perennial cultivated grasslands on the Qinghai-Tibet Plateau helps address the seasonal imbalance of forage resources and supports the restoration of degraded grasslands. The most common planting patterns-monocropping and mixed cropping-are well-studied in terms of vegetation structure, productivity, and soil nutrients. Despite their significance, the influence of prolonged planting practices on underground soil microbial communities and metabolites has often been neglected. In this study, two characteristic plants, Festuca sinensis 'Qinghai' and Poa pratensis 'Qinghai', from the area around Qinghai Lake were selected as the experimental subjects by employing 16 S and ITS sequencing methods in conjunction with non-targeted metabolomics analysis. The effects of planting patterns (monocropping and mixed cropping) on rhizosphere soil characteristics, metabolites and microbial community structure were examined. The results showed that compared with monocropping, mixed cropping significantly increased the contents of soil nutrients and key metabolites. In addition, it had a greater impact on fungal diversity than bacterial diversity, particularly in terms of β-diversity. While microbial α-diversity and dominant phyla remained stable, soil fungi were more responsive to changes in soil properties and metabolites. These results show that the new niche differentiation between different species in mixed grassland stimulates the secretion of trehalose and valine, which further affects the fungal community structure and enhances the soil nutrients and ecological functions of degraded grasslands. These findings will guide the restoration of degraded grasslands around Qinghai Lake and the selection of planting strategies to improve local sustainable grassland productivity.
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Affiliation(s)
- Xiaofang Zhang
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Chunping Zhang
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Yuzhen Liu
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Lian Huo
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Zengzeng Yang
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Yongshang Tong
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Xue Zhang
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Zehang Yu
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Xiaoxia Yang
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Quan Cao
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China
| | - Quanmin Dong
- Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining, 810016, Qinghai, China.
- Qinghai Provincial Key Laboratory of Adaptive Management on Alpine Grassland, Xining, 810016, Qinghai, China.
- Key Laboratory of the Alpine Grassland Ecology in the Three Rivers Region, Ministry of Education, Qinghai University, Xining, 810016, Qinghai, China.
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Guo B, Wei Y, Liu X, Qian T, Guo J, Yang J, Chen T. Water-soluble carboxymethyl chitosan and rhamnolipids promote the remediation of Cd-contaminated soil by mediating the growth of Hylotelephium spectabile and regulating the rhizospheric ecological environment. JOURNAL OF HAZARDOUS MATERIALS 2025; 486:137040. [PMID: 39764969 DOI: 10.1016/j.jhazmat.2024.137040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Revised: 12/18/2024] [Accepted: 12/28/2024] [Indexed: 03/12/2025]
Abstract
The application of biodegradable chelating agents in phytoremediation is a promising approach. This study aimed to investigate the effects and roles of underlying mechanisms of water-soluble carboxymethyl chitosan (WSCC) and rhamnolipids (RLs) on the remediation of Cd-contaminated soil by Hylotelephium spectabile. WSCC and RLs mediated the growth of H. spectabile by increasing chlorophyll content and the activity of antioxidant enzymes as well as promoted the conversion of water-extractable Cd to HAc-extractable Cd in leaves. WSCC and RLs promoted the secretion of malic acid, acetic acid, and succinic acid by the roots; decreased soil pH; increased the number of functional groups, such as hydroxyl, amino, and carboxyl groups, in the soil; and changed the diversity and structure of bacterial communities in the soil, thereby improving the bioavailability of Cd in the soil and creating a good ecological environment of the rhizosphere. The combined application of WSCC and RLs had a better auxiliary effect than single application of either, especially under CR2 treatment (1.5 g·kg-1 WSCC + 0.2 g·kg-1 RLs), where the accumulation of Cd in plants significantly increased by 159.86 % compared with the control. These findings indicated that WSCC and RLs enhanced the remediation efficiency of H. spectabile by regulating both plant growth and the ecological environment of the rhizosphere.
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Affiliation(s)
- Bingxin Guo
- College of Environment and Ecology, Taiyuan University of Technology, Shanxi Key Laboratory of Earth Surface Processes and Resource Ecological Security in Fenhe River Basin, Shanxi Engineering Research Center of Low Carbon Remediation for Water and Soil Pollution in Yellow River Basin, Jinzhong 030600, China
| | - Yuexing Wei
- College of Environment and Ecology, Taiyuan University of Technology, Shanxi Key Laboratory of Earth Surface Processes and Resource Ecological Security in Fenhe River Basin, Shanxi Engineering Research Center of Low Carbon Remediation for Water and Soil Pollution in Yellow River Basin, Jinzhong 030600, China
| | - Xiaona Liu
- College of Civil Engineering, Taiyuan University of Technology, Jinzhong, Shanxi 030600, China
| | - Tianwei Qian
- College of Civil Engineering, Taiyuan University of Technology, Jinzhong, Shanxi 030600, China
| | - Junmei Guo
- College of Environment and Ecology, Taiyuan University of Technology, Shanxi Key Laboratory of Earth Surface Processes and Resource Ecological Security in Fenhe River Basin, Shanxi Engineering Research Center of Low Carbon Remediation for Water and Soil Pollution in Yellow River Basin, Jinzhong 030600, China.
| | - Junxing Yang
- Center for Environmental Remediation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Tongbin Chen
- Center for Environmental Remediation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
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Zhang N, Zhou Z, Wang Y, Zhou S, Ma J, Sun J, Chen K. Vertical Stratification Reduces Microbial Network Complexity and Disrupts Nitrogen Balance in Seasonally Frozen Ground at Qinghai Lake in Tibet. Microorganisms 2025; 13:459. [PMID: 40005823 PMCID: PMC11858239 DOI: 10.3390/microorganisms13020459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2025] [Revised: 02/18/2025] [Accepted: 02/18/2025] [Indexed: 02/27/2025] Open
Abstract
Global climate change has accelerated the reduction of permafrost regions across different altitude gradients, shortening the duration of the freezing period to varying extents. However, the response of the soil microorganisms of frozen soils along altitude gradients remains unclear. In this study, we employed 16S rRNA sequencing and LC-MS metabolomics to investigate the response of soil microbial communities and soil metabolites to vertical stratification in the permafrost soils of the Qinghai Lake region. The results indicated that Proteobacteria, Firmicutes, and Actinobacteria were key soil bacterial phyla in the permafrost soils of Qinghai Lake during the freezing period, with Proteobacteria and Firmicutes showing significant sensitivity to vertical stratification (p < 0.05). The majority of the physicochemical factors exhibited a trend of initially increasing and then decreasing with increasing altitude, whereas pH showed the opposite trend. pH and moisture content were identified as the most important environmental factors influencing soil bacterial community structure. Deterministic processes dominated the assembly of bacterial communities of frozen soils in the Qinghai Lake basin. Co-occurrence network analysis showed that increasing altitude gradients led to a higher average degree of the bacterial network, while reducing network complexity and inter-species connectivity. Soil metabolomics analysis revealed that vertical stratification altered the metabolic profiles of 27 metabolites, with the significantly changed metabolites primarily associated with carbohydrate and amino acid metabolism. In conclusion, the characteristics of the Qinghai Lake permafrost were regulated by regional vertical stratification, which further influenced microbial community structure and soil metabolic characteristics, thereby altering carbon and nitrogen stocks. Specifically, higher altitudes were more favorable for the retention of the carbon and nitrogen stocks of frozen soils in the Qinghai Lake basin.
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Affiliation(s)
- Ni Zhang
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, College of Geographical Science, Qinghai Normal University, Xining 810008, China; (N.Z.); (Y.W.); (S.Z.); (J.M.)
- Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Ministry of Education, Qinghai Normal University, Xining 810008, China;
- National Positioning Observation and Research Station of Qinghai Lake Wetland Ecosystem in Qinghai, National Forestry and Grassland Administration, Haibei 812300, China
| | - Zhiyun Zhou
- Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Ministry of Education, Qinghai Normal University, Xining 810008, China;
- National Positioning Observation and Research Station of Qinghai Lake Wetland Ecosystem in Qinghai, National Forestry and Grassland Administration, Haibei 812300, China
| | - Yijun Wang
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, College of Geographical Science, Qinghai Normal University, Xining 810008, China; (N.Z.); (Y.W.); (S.Z.); (J.M.)
- Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Ministry of Education, Qinghai Normal University, Xining 810008, China;
- National Positioning Observation and Research Station of Qinghai Lake Wetland Ecosystem in Qinghai, National Forestry and Grassland Administration, Haibei 812300, China
| | - Shijia Zhou
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, College of Geographical Science, Qinghai Normal University, Xining 810008, China; (N.Z.); (Y.W.); (S.Z.); (J.M.)
- Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Ministry of Education, Qinghai Normal University, Xining 810008, China;
- National Positioning Observation and Research Station of Qinghai Lake Wetland Ecosystem in Qinghai, National Forestry and Grassland Administration, Haibei 812300, China
| | - Jing Ma
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, College of Geographical Science, Qinghai Normal University, Xining 810008, China; (N.Z.); (Y.W.); (S.Z.); (J.M.)
- Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Ministry of Education, Qinghai Normal University, Xining 810008, China;
- National Positioning Observation and Research Station of Qinghai Lake Wetland Ecosystem in Qinghai, National Forestry and Grassland Administration, Haibei 812300, China
| | - Jianqing Sun
- Qinghai Lake National Nature Reserve Administration, Xining 810008, China;
| | - Kelong Chen
- Qinghai Province Key Laboratory of Physical Geography and Environmental Process, College of Geographical Science, Qinghai Normal University, Xining 810008, China; (N.Z.); (Y.W.); (S.Z.); (J.M.)
- Key Laboratory of Tibetan Plateau Land Surface Processes and Ecological Conservation, Ministry of Education, Qinghai Normal University, Xining 810008, China;
- National Positioning Observation and Research Station of Qinghai Lake Wetland Ecosystem in Qinghai, National Forestry and Grassland Administration, Haibei 812300, China
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Xu M, Liu X, Chen T, Zhao Y, Ma L, Shi X, Chen X, Shi Y, Adams JM. Dynamics of wheat rhizosphere microbiome and its impact on grain production across growth stages. THE SCIENCE OF THE TOTAL ENVIRONMENT 2025; 964:178524. [PMID: 39837123 DOI: 10.1016/j.scitotenv.2025.178524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2024] [Revised: 01/08/2025] [Accepted: 01/13/2025] [Indexed: 01/23/2025]
Abstract
Crop plant microbiomes are increasingly seen as important in plant nutrition and health, and a key to maintaining food productivity. Currently, little is known of the temporal changes that occur in the wheat rhizosphere microbiome as the plant develops, and how this varies among different sites. We used a pot-based mesocosm experiment with the same modern wheat cultivar grown in eight soils from across the North China Plain, a major wheat producing area. DNA from rhizosphere soil was taken from wheat plants, from seedling up to grain harvesting stage, and amplicon sequenced for prokaryotes and microeukaryotes, followed by community analysis. Our results showed that rhizosphere diversity of prokaryotes and microeukaryotes increased over time in most sites. While there was turnover between earlier- and later-arriving species, the predominant successional model was accumulation, with early arrivals remaining in place as others colonized the rhizosphere. Rhizosphere community network modularity and stability increased during the development and maturation of the wheat plant. The abundances of certain stage-specific keystone species were correlated with eventual grain yield - suggesting a potentially important role in wheat production. Some keystone species belonged to groups previously implicated in various functions. This study provides a basis for further experimental investigation of the wheat rhizosphere microbiome, its role in determining crop yields, and the potential for microbiome engineering to promote yields. The sequential arrival and accumulation of microbiota suggests that deliberate inoculation might accelerate this process.
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Affiliation(s)
- Mengwei Xu
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Xu Liu
- Department of Microbiology, College of Life Sciences, Nanjing Agricultural University, Key Laboratory of Agricultural and Environmental Microbiology, Ministry of Agriculture and Rural Affairs, Nanjing 210095, China; State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China University of Chinese Academy of Sciences, Beijing 100049, China
| | - Tongyao Chen
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Yige Zhao
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Liya Ma
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Xiaoyu Shi
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Xiao Chen
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Yu Shi
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China.
| | - Jonathan M Adams
- School of Geographic and Oceanographic Sciences, Nanjing University, Nanjing 210023, China
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Zhao P, Zhou H, Liao X, Zhao L, Zheng Y, Xiong T, Zhang G, Jiang S, Wang J, He Y, Li J, Zhu J, Zhang Y, Li Y, Nian F, Liu D. The regulation of tobacco growth under preceding crop planting: insights from soil quality, microbial communities, and metabolic profiling. FRONTIERS IN PLANT SCIENCE 2025; 16:1530324. [PMID: 39990714 PMCID: PMC11842363 DOI: 10.3389/fpls.2025.1530324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2024] [Accepted: 01/20/2025] [Indexed: 02/25/2025]
Abstract
Introduction Specific microorganisms and metabolites in soil play key roles in regulating organismal behavior. Currently, the effects of different preceding crops on the rhizosphere soil quality of flue-cured tobacco remain unclear. Methods Four treatments were compared in the study: fallow + tobacco (CK), maize + tobacco (T1), rapeseed + tobacco (T2), and wheat + tobacco (T3). Results and discussion Results showed that preceding crops significantly enhanced soil nutrient levels and improved tobacco growth by altering rhizosphere metabolites and microbial community structure. Previous cultivation of maize and rapeseed significantly promoted tobacco growth, rapeseed and wheat cultivation enhanced the diversity of soil bacterial communities, and notably decreased the abundance of urea-degrading bacteria. In contrast, the preceding crop of maize reduced plant pathogenic fungi and promoted positive microbial interactions. Metabolomics analysis showed that different preceding crops altered lipids, organic acids, flavonoids, alkaloids, and terpenoids, enhancing secondary metabolite synthesis pathways in soil. Preceding crops regulated rhizosphere metabolites which potentially participated in soil carbon and nitrogen cycling, balancing soil nutrients, and improving tobacco yield. Overall, the three preceding crops altered the composition and function of metabolites and microbial community structures in rhizosphere soil, thereby increased soil nutrient concentration. Both maize and rapeseed cultivation significantly boosted tobacco growth and biomass. These findings offer new insights into the potential interactions between rhizosphere metabolites and microbial communities and strategies of comprehensively regulating tobacco growth.
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Affiliation(s)
- Peiyan Zhao
- College of Tobacco Science, Yunnan Agricultural University, Kunming, Yunnan, China
| | - Houfa Zhou
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Xiaolin Liao
- College of Food Science and Technology, Yunnan Agricultural University, Kunming, Yunnan, China
| | - Leifeng Zhao
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming, Yunnan, China
| | - Yuanxian Zheng
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Tiane Xiong
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Gaorun Zhang
- College of Tobacco Science, Yunnan Agricultural University, Kunming, Yunnan, China
| | - Sirong Jiang
- College of Tobacco Science, Yunnan Agricultural University, Kunming, Yunnan, China
| | - Jiming Wang
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Yuansheng He
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Jiangtao Li
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Jieying Zhu
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Yongjun Zhang
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Yanrun Li
- Technology and Research Center, Lincang Branch Company of Yunnan Tobacco Company, Lincang, Yunnan, China
| | - Fuzhao Nian
- College of Tobacco Science, Yunnan Agricultural University, Kunming, Yunnan, China
| | - Di Liu
- College of Tobacco Science, Yunnan Agricultural University, Kunming, Yunnan, China
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Zhang J, Chen G, Li Y, Zhang J, Zhong L, Li L, Zhong S, Gu R. Phlomoides rotata adapts to low-nitrogen environments by promoting root growth and increasing root organic acid exudate. BMC PLANT BIOLOGY 2024; 24:1234. [PMID: 39710688 DOI: 10.1186/s12870-024-05962-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Accepted: 12/11/2024] [Indexed: 12/24/2024]
Abstract
Nitrogen (N) is one of the three major elements required for plant growth and development. It is of great significance to study the effects of different nitrogen application levels on the growth and root exudates of Phlomoides rotata, and can provide a theoretical basis for its scientific application of fertilizer to increase production. In this study, Phlomoides rotata were grown under different nitrogen conditions for two months. Soil and plant analyzer development (SPAD) values, bioaccumulation, root morphology, root exudate composition, nitrogen metabolism enzyme and antioxidant enzyme activity were evaluated. The results showed that compared with CK (no N fertilizer), N2 (CO(NH2)2 80 mg/kg) and N3 (CO(NH2)2 160 mg/kg) through significantly improved the activities of nitrogen metabolism enzyme nitrite reductase (NiR), glutamate dehydrogenase (GDH) and glutamine synthetase (GS), enhanced the nitrogen metabolism process, and increased the accumulation of plant soluble sugars (SS) and soluble protein (SP), thus improving Phlomoides rotata biomass yield. After 60 days of treatment, low nitrogen (N1, CO(NH2)2 40 mg/kg) increased root length, root volume, root surface area, average root diameter, significantly increased the diversity of organic acids in root exudates, and enhanced the activity of antioxidant enzymes to adapt the nitrogen deficiency environment. This study can provide new ideas for understanding the mechanism of nitrogen tolerance in Phlomoides rotata and developing scientific fertilization management strategies for plateau plants and medicinal plants.
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Affiliation(s)
- Jielin Zhang
- School of Ethnic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China
| | - Guopeng Chen
- School of Ethnic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China
| | - Yuan Li
- School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China
| | - Jie Zhang
- School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China
| | - Liwen Zhong
- School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China
| | - Ling Li
- School of Pharmacy, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China
| | - Shihong Zhong
- College of Pharmacy, Southwest Minzu University, Chengdu, 610041, China.
| | - Rui Gu
- School of Ethnic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, China.
- State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, No. 1166 Liutai Avenue, Chengdu, 611137, China.
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Xing Y, Wang X. Precise application of water and fertilizer to crops: challenges and opportunities. FRONTIERS IN PLANT SCIENCE 2024; 15:1444560. [PMID: 39711591 PMCID: PMC11659019 DOI: 10.3389/fpls.2024.1444560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/05/2024] [Accepted: 11/18/2024] [Indexed: 12/24/2024]
Abstract
Precision water and fertilizer application technologies have emerged as crucial innovations in sustainable agriculture, addressing the pressing need to enhance crop yield and quality while optimizing resource use and minimizing environmental impacts. This review systematically explores the latest advancements in precision water and fertilizer application technologies. It examines the integration of advanced sensors, remote sensing, and machine learning algorithms in precision agriculture, assessing their roles in optimizing irrigation and nutrient management. The study evaluates various precision techniques, including micro-irrigation systems, variable rate technology (VRT), and predictive modeling, along with their implementation in diverse agricultural settings. Furthermore, the review addresses the challenges posed by soil environmental heterogeneity and emphasizes the necessity for a scientific index system to guide precise applications. Advanced irrigation methods, such as subsurface drip irrigation and micro-sprinkling, improve water-use efficiency and reduce salinity levels, while precision fertilization techniques optimize nutrient uptake and minimize leaching. The integration of machine learning and remote sensing facilitates real-time monitoring and adaptive management, resulting in increased resource use efficiency and reduced environmental pollution. However, the effectiveness of these technologies is contingent upon addressing soil heterogeneity and developing standardized application indices. This review highlights the novel combination of advanced sensing technologies and data analytics in precision agriculture, enabling targeted interventions tailored to specific field conditions. It underscores the importance of integrating soil microbial community dynamics and biochemical indicators with precision management practices to enhance soil fertility and crop performance. Furthermore, the development of predictive models and time series analysis tools represents a significant advancement in anticipating and responding to changing environmental conditions. Precision water and fertilizer application technologies offer substantial benefits for sustainable agricultural practices by improving crop yields, enhancing resource efficiency, and mitigating environmental impacts. The strategic integration of these technologies with tailored agricultural practices and robust monitoring systems is essential for optimizing nutrient cycling and maintaining soil health. Addressing existing challenges through interdisciplinary research and collaborative efforts will further advance the implementation of precision agriculture, contributing to long-term soil sustainability and global food security.
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Affiliation(s)
| | - Xiukang Wang
- Key Laboratory of Applied Ecology of Loess Plateau, College of Life Science, Yan’an University, Yan’an, Shaanxi, China
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Zhao XY, Gao JL, Yu XF, Borjigin QG, Qu J, Zhang BZ, Zhang SN, Li Q, Guo JA, Li DB. Evaluation of the microbial community in various saline alkaline-soils driven by soil factors of the Hetao Plain, Inner Mongolia. Sci Rep 2024; 14:28931. [PMID: 39572617 PMCID: PMC11582701 DOI: 10.1038/s41598-024-80328-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Accepted: 11/18/2024] [Indexed: 11/24/2024] Open
Abstract
Soil microbial communities play a crucial role in maintaining diverse ecosystem functions within the saline-alkali soil ecosystems. Therefore, in this study, we collected various saline-alkaline soils from across the Inner Mongolia Hetao irrigation area. The soil chemical properties were analyzed, and the microbial diversity of bacteria and fungi was measured using 16 S rRNA and ITS rRNA amplicon sequencing. The dynamic relationship between the soil microbial community and soil factors was analyzed using the ABT (Aggregate Enhanced tree) model, the co-occurrence network, and the structural equation model. The results indicated that electrical conductivity (EC) was the biggest driving force of various saline-alkaline soils, affecting the community structure of bacteria (22.80%) and fungi (21.30%). The soil samples were categorized into three treatment levels based on their EC values: the low-salinity group (L, EC: 0-1 ms/cm, n = 10), the medium-salinity group (M, EC: 1-2 ms/cm, n = 8), and the high-salinity group (H, EC > 2 ms/cm, n = 6). The results demonstrated a negative correlation between microbial abundance and salinity-alkalinity, while revealing an enhanced interrelationship among species. The alterations in bacterial (12.36%) and fungal (22.92%) communities in various saline-alkali soils were primarily driven by saline-alkali ions, which served as the principal direct factors. The negative correlation between EC and SOM exhibited the highest magnitude, whereas the positive correlation between soil organic carbon and EC demonstrated the greatest strength. Therefore, it was further substantiated that EC played a pivotal role in shaping the distinct microbial communities in saline-alkali soils.
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Affiliation(s)
- Xiao-Yu Zhao
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China
- Institute of Maize Research, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Huhehaote, China
| | - Ju-Lin Gao
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China.
| | - Xiao-Fang Yu
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China.
| | - Qing-Geer Borjigin
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China
| | - Jiawei Qu
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China
| | - Bi-Zhou Zhang
- Institute of Maize Research, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Huhehaote, China
| | - Sai-Nan Zhang
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China
- Institute of Maize Research, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Huhehaote, China
| | - Qiang Li
- Institute of Maize Research, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Huhehaote, China
| | - Jiang-An Guo
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China
- Institute of Maize Research, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Huhehaote, China
| | - Dong-Bo Li
- Inner Mongolia Autonomous Region Engineering Research Center for In-Situ Maize Stalk Returning Microbiology, Inner Mongolia Agricultural University, Huhehaote, China
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10
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Xu F, Qiu D, Hu Y, Chen X, Li Z, Li Q. Metabolomic Analysis of Specific Metabolites in Codonopsis pilosula Soil Under Different Stubble Conditions. Molecules 2024; 29:5333. [PMID: 39598722 PMCID: PMC11596127 DOI: 10.3390/molecules29225333] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2024] [Revised: 11/03/2024] [Accepted: 11/09/2024] [Indexed: 11/29/2024] Open
Abstract
To investigate the soil-specific metabolites of Codonopsis pilosula under different stubble management practices, this study analyzed differentially abundant metabolites in the rhizosphere soils of rotational (DS) and continuous (LS) cropping systems via liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based metabolomic approaches. The results revealed that 66 metabolites, including amino acids and their derivatives, nucleic acids, alcohols, organic acids, amines, fatty acids, purines, and sugars, were significantly different (p < 0.05) between the DS and LS groups. Under continuous cropping, the levels of amines, fatty acids, organic acids, and sugars in the rhizosphere soil were significantly greater (p < 0.05) than those under rotational cropping, whereas the levels of amino acids and their derivatives, nucleic acids, and purines and pyrimidines were significantly lower (p < 0.05). KEGG pathway enrichment analysis revealed that these differentially abundant metabolites were enriched in metabolic pathways such as amino acid metabolism (e.g., alanine, aspartate, and glutamate metabolism), carbon metabolism, the cAMP signaling pathway, ABC transporter proteins, phenylalanine metabolism, and the biosynthesis of plant secondary metabolites. These metabolic pathways were involved in osmoregulation, energy supply, and resilience in plants. In conclusion, inter-root soil metabolites in rotational and continuous cropping of Codonopsis pilosula were able to influence soil physicochemical properties and microbial populations by participating in various biological processes.
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Affiliation(s)
- Fengbin Xu
- State Key Laboratory of Aridland Crop Science, Agronomy College, Gansu Agricultural University, Lanzhou 730070, China; (F.X.); (Y.H.); (X.C.); (Q.L.)
| | - Daiyu Qiu
- State Key Laboratory of Aridland Crop Science, Agronomy College, Gansu Agricultural University, Lanzhou 730070, China; (F.X.); (Y.H.); (X.C.); (Q.L.)
| | - Yurong Hu
- State Key Laboratory of Aridland Crop Science, Agronomy College, Gansu Agricultural University, Lanzhou 730070, China; (F.X.); (Y.H.); (X.C.); (Q.L.)
| | - Xianxian Chen
- State Key Laboratory of Aridland Crop Science, Agronomy College, Gansu Agricultural University, Lanzhou 730070, China; (F.X.); (Y.H.); (X.C.); (Q.L.)
| | - Zhonghu Li
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, Life Sciences College, Northwest University, Xi’an 710069, China;
| | - Qian Li
- State Key Laboratory of Aridland Crop Science, Agronomy College, Gansu Agricultural University, Lanzhou 730070, China; (F.X.); (Y.H.); (X.C.); (Q.L.)
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11
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Sun Y, Yang X, Elsgaard L, Du T, Siddique KHM, Kang S, Butterbach-Bahl K. Diversified crop rotations improve soil microbial communities and functions in a six-year field experiment. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 370:122604. [PMID: 39303593 DOI: 10.1016/j.jenvman.2024.122604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 09/09/2024] [Accepted: 09/17/2024] [Indexed: 09/22/2024]
Abstract
Diversified crop rotations can help mitigate the negative impacts of increased agricultural intensity on the sustainability of agroecosystems. However, the impact of crop rotation diversity on the complexity of soil microbial association networks and ecological functions is still not well understood. In this study, a 6-year field experiment was conducted to evaluate how six different crop rotations change the composition and network complexity of soil microbial communities, as well as their related ecological functions. Microbial traits were measured in six crop rotations with different crop diversity index (CDI) during 2016-2022, including winter wheat-summer maize (CDI 1, WM) as the control, sweet potato→winter wheat-summer maize (CDI 1.5, SpWM), peanut→winter wheat-summer maize (CDI 1.5, PWM), soybean→winter wheat-summer maize (CDI 1.5, SWM), spring maize→winter wheat-summer maize (CDI 1.5, SmWM), and ryegrass-sweet sorghum→winter wheat-summer maize (CDI 2, RSWM). The study findings indicated that diversified crop rotations significantly increased ASV richness of both bacterial and fungal communities after 6-year treatments, and the β-diversity profiles of bacterial and fungal communities significantly distinguished at the year of 2022 from 2016. The relative abundance of Acidobacteria and Chloroflexi was significantly enriched in SpWM rotation at 2022, while Basidiomycota significantly declined in five diversified rotations compared to WM. Diversified crop rotations at 2022 increased the complexity and density of bacterial and fungal networks than 2016. SpWM and PWM rotations had the highest functional groups involved in chemoheterotrophy and saprotroph, respectively. Structural equation modelling (SEM) also revealed that diversified crop rotations increased soil nutrients through improving the composition of bacterial communities and the augmented intricacy of the interconnections within both bacterial and fungal communities. This research underscores the importance of preserving the diversity and ecological functions of soil microorganisms in the nutrient-recycling processes for efficient agricultural practices.
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Affiliation(s)
- Yifei Sun
- State Key Laboratory of Efficient Utilization of Agricultural Water Resources, Beijing, 100083, China
| | - Xiaolin Yang
- State Key Laboratory of Efficient Utilization of Agricultural Water Resources, Beijing, 100083, China; Center for Agricultural Water Research in China, China Agricultural University, Beijing, 100083, China.
| | - Lars Elsgaard
- Department of Agroecology, Aarhus University, Blichers Alle 20, 8830, Tjele, Denmark
| | - Taisheng Du
- State Key Laboratory of Efficient Utilization of Agricultural Water Resources, Beijing, 100083, China; Center for Agricultural Water Research in China, China Agricultural University, Beijing, 100083, China
| | - Kadambot H M Siddique
- The UWA Institute of Agriculture, The University of Western Australia, Perth, WA 6001, Australia
| | - Shaozhong Kang
- State Key Laboratory of Efficient Utilization of Agricultural Water Resources, Beijing, 100083, China; Center for Agricultural Water Research in China, China Agricultural University, Beijing, 100083, China
| | - Klaus Butterbach-Bahl
- Land-CRAFT, Department of Agroecology, Aarhus University, Aarhus, Denmark; Institute of Meteorology and Climate Research, Atmospheric Environmental Research (IMK-IFU), Karlsruhe Institute of Technology (KIT), Garmisch Partenkirchen, Germany
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12
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Luo X, Yan G, Wang Q, Xing Y. Community structure, diversity and function of endophytic and soil microorganisms in boreal forest. Front Microbiol 2024; 15:1410901. [PMID: 39417072 PMCID: PMC11480031 DOI: 10.3389/fmicb.2024.1410901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 09/23/2024] [Indexed: 10/19/2024] Open
Abstract
Introduction Despite extensive studies on soil microbial community structure and functions, the significance of plant-associated microorganisms, especially endophytes, has been overlooked. To comprehensively anticipate future changes in forest ecosystem function under future climate change scenarios, it is imperative to gain a thorough understanding of the community structure, diversity, and function of both plant-associated microorganisms and soil microorganisms. Methods In our study, we aimed to elucidate the structure, diversity, and function of leaf endophytes, root endophytes, rhizosphere, and soil microbial communities in boreal forest. The microbial structure and composition were determined by high-throughput sequencing. FAPROTAX and FUNGuild were used to analyze the microbial functional groups. Results Our findings revealed significant differences in the community structure and diversity of fungi and bacteria across leaves, roots, rhizosphere, and soil. Notably, we observed that the endophytic fungal or bacterial communities associated with plants comprised many species distinct from those found in the soil microbial communities, challenging the assumption that most of endophytic fungal or bacterial species in plants originate from the soil. Furthermore, our results indicated noteworthy differences in the composition functional groups of bacteria or fungi in leaf endophytes, root endophytes, rhizosphere, and soil, suggesting distinct roles played by microbial communities in plants and soil. Discussion These findings underscore the importance of recognizing the diverse functions performed by microbial communities in both plant and soil environments. In conclusion, our study emphasizes the necessity of a comprehensive understanding of the structure and function microbial communities in both plants and soil for assessing the functions of boreal forest ecosystems.
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Affiliation(s)
- Xi Luo
- School of Life Sciences, Qufu Normal University, Qufu, China
- Library, Qufu Normal University, Qufu, China
| | - Guoyong Yan
- School of Life Sciences, Qufu Normal University, Qufu, China
| | - Qinggui Wang
- School of Life Sciences, Qufu Normal University, Qufu, China
| | - Yajuan Xing
- School of Life Sciences, Qufu Normal University, Qufu, China
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13
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Cai X, Chen C, Singh AK, Zhu X, Liu W. Anthropogenic restoration exhibits more complex and stable microbial co-occurrence patterns than natural restoration in rubber plantations. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 948:174935. [PMID: 39053530 DOI: 10.1016/j.scitotenv.2024.174935] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 07/05/2024] [Accepted: 07/19/2024] [Indexed: 07/27/2024]
Abstract
Forest restoration is an effective method for restoring degraded soil ecosystems (e.g., converting primary tropical forests into rubber monoculture plantations; RM). The effects of forest restoration on microbial community diversity and composition have been extensively studied. However, how rubber plantation-based forest restoration reshapes soil microbial communities, networks, and inner assembly mechanisms remains unclear. Here, we explored the effects of jungle rubber mixed (JRM; secondary succession and natural restoration of RM) plantation and introduction of rainforest species (AR; anthropogenic restoration established by mimicking the understory and overstory tree species of native rainforests) to RM stands on soil physico-chemical properties and microbial communities. We found that converting tropical rainforest (RF) to RM decreased soil fertility and simplified microbial composition and co-occurrence patterns, whereas the conversion of RM to JRM and AR exhibited opposite results. These changes were significantly correlated with pH, soil moisture content (SMC), and soil nutrients, suggesting that vegetation restoration can provide a favorable soil microenvironment that promotes the development of soil microorganisms. The complexity and stability of the bacterial-fungal cross-kingdom, bacterial, and fungal networks increased with JRM and AR. Bacterial community assembly was primarily governed by stochastic (78.79 %) and deterministic (59.09 %) processes in JRM and AR, respectively, whereas stochastic processes (limited dispersion) predominantly shaped fungal assembly across all forest stands. AR has more significant benefits than JRM, such as a relatively slower and natural vegetation succession with more nutritive soil conditions, microbial diversity, and complex and stable microbial networks. These results highlight the importance of sustainable forest management to restore soil biodiversity and ecosystem functions after extensive soil degradation and suggest that anthropogenic restoration can more effectively improve soil quality and microbial communities than natural restoration in degraded rubber plantations.
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Affiliation(s)
- Xiaoyi Cai
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chunfeng Chen
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303, China.
| | - Ashutosh Kumar Singh
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303, China
| | - Xiai Zhu
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303, China.
| | - Wenjie Liu
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303, China.
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14
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Su H, Lai H, Gao F, Zhang R, Wu S, Ge F, Li Y, Yao H. The proliferation of beneficial bacteria influences the soil C, N, and P cycling in the soybean-maize intercropping system. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:25688-25705. [PMID: 38483720 DOI: 10.1007/s11356-024-32851-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2023] [Accepted: 03/06/2024] [Indexed: 04/19/2024]
Abstract
Soybean-maize intercropping system can improve the utilization rate of farmland and the sustainability of crop production systems. However, there is a significant gap in understanding the interaction mechanisms between soil carbon (C), nitrogen (N), and phosphorus (P) cycling functional genes, rhizosphere microorganisms, and nutrient availability. To reveal the key microorganisms associated with soil nutrient utilization and C, N, and P cycling function in the soybean-maize intercropping system, we investigated the changes in soil properties, microbial community structure, and abundance of functional genes for C, N, and P cycling under soybean-maize intercropping and monocropping at different fertility stages in a pot experiment. We found that there was no significant difference in the rhizosphere microbial community between soybean-maize intercropping and monocropping at the seeding stage. As the reproductive period progressed, differences in microbial community structure between intercropping and monocropping gradually became significant, manifesting the advantages of intercropping. During the intercropping process of soybean and maize, the relative abundance of beneficial bacteria in soil rhizosphere significantly increased, particularly Streptomycetaceae and Pseudomonadaceae. Moreover, the abundances of C, N, and P cycling functional genes, such as abfA, mnp, rbcL, pmoA (C cycling), nifH, nirS-3, nosZ-2, amoB (N cycling), phoD, and ppx (P cycling), also increased significantly. Redundancy analysis and correlation analysis showed that Streptomycetaceae and Pseudomonadaceae were significantly correlated with soil properties and C, N, and P cycling functional genes. In brief, soybean and maize intercropping can change the structure of microbial community and promote the proliferation of beneficial bacteria in the soil rhizosphere. The accumulation of these beneficial bacteria increased the abundance of C, N, and P cycling functional genes in soil and enhanced the ability of plants to fully utilize environmental nutrients and promoted growth.
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Affiliation(s)
- Hao Su
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, Fujian Province, China
- Zhejiang Provincial Key Laboratory of Urban Environmental Process and Pollution Control, Ningbo (Beilun) Zhongke Haixi Industry Technology Innovation Center, Ningbo, 315800, Zhejiang Province, China
- College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Huiling Lai
- Lianhe Equator Environmental Impact Assessment Co., Ltd, Tianjin, 300042, China
| | - Fuyun Gao
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, Fujian Province, China
- Zhejiang Provincial Key Laboratory of Urban Environmental Process and Pollution Control, Ningbo (Beilun) Zhongke Haixi Industry Technology Innovation Center, Ningbo, 315800, Zhejiang Province, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ruipeng Zhang
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, Fujian Province, China
- Zhejiang Provincial Key Laboratory of Urban Environmental Process and Pollution Control, Ningbo (Beilun) Zhongke Haixi Industry Technology Innovation Center, Ningbo, 315800, Zhejiang Province, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Sixuan Wu
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, Fujian Province, China
- Zhejiang Provincial Key Laboratory of Urban Environmental Process and Pollution Control, Ningbo (Beilun) Zhongke Haixi Industry Technology Innovation Center, Ningbo, 315800, Zhejiang Province, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Furong Ge
- Beilun District Agriculture and Rural Bureau, Ningbo, 315800, Zhejiang Province, China
| | - Yaying Li
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, Fujian Province, China.
- Zhejiang Provincial Key Laboratory of Urban Environmental Process and Pollution Control, Ningbo (Beilun) Zhongke Haixi Industry Technology Innovation Center, Ningbo, 315800, Zhejiang Province, China.
| | - Huaiying Yao
- Wuhan Institute of Technology, Wuhan, 430074, China
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Cui X, Yuan J, Yang X, Wei C, Bi Y, Sun Q, Meng J, Han X. Biochar application alters soil metabolites and nitrogen cycle-related microorganisms in a soybean continuous cropping system. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 917:170522. [PMID: 38309356 DOI: 10.1016/j.scitotenv.2024.170522] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Revised: 01/15/2024] [Accepted: 01/26/2024] [Indexed: 02/05/2024]
Abstract
Biochar application is a promising practice to enhance soil fertility. However, it is unclear how field-aged biochar affects the soil metabolites and microbial communities in soybean fields. Here, the rhizosphere soil performance after amending with biochar addition rates at 0 (CK), 20 (B20), 40 (B40), and 60 t ha-1 (B60) was examined via a five-year in-situ field experiment based on a soybean continuous cropping system. Untargeted metabolomics and metagenomics analysis techniques were applied to study the regulatory mechanism of biochar on soybean growth from metabolomics and N cycle microbiology perspectives. We found that the contents of soil total N (TN), available N (Ava N), NH4+-N, and NO3--N were significantly increased with biochar addition amounts by 20.0-65.7 %, 3.6-10.7 %, 29.5-57.1 %, and 24.4-46.7 %, respectively. The B20, B40, and B60 triggered 259 (236 were up-regulated and 23 were down-regulated), 236 (220 were up-regulated and 16 were down-regulated), and 299 (264 were up-regulated and 35 were down-regulated) differential metabolites, respectively. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis and topology analysis demonstrated that differential metabolites were highly enriched in seven metabolic pathways such as Oxidative phosphorylation and Benzoxazinoid biosynthesis. Moreover, ten differential metabolites were up-regulated in all three treatments with biochar. Biochar treatments decreased the Nitrospira abundance in soybean rhizosphere soil while increasing Bradyrhizobium abundance significantly in B60. Mantel test revealed that as the biochar addition rate grows, the correlation between Nitrospira and soil properties other than NO3--N became stronger. In conclusion, the co-application of biochar with fertilizers is a feasible and effective way to improve soil N supply, even though biochar has undergone field aging. This work offers new insights into the variations in soil metabolites and microbial communities associated with N metabolism processes under biochar addition in soybean continuous cropping soils.
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Affiliation(s)
- Xin Cui
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China
| | - Jun Yuan
- Liaodong University, Dandong 118001, China
| | - Xu Yang
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China.
| | - Chaoqun Wei
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China
| | - Yinghui Bi
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China
| | - Qiang Sun
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China
| | - Jun Meng
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China
| | - Xiaori Han
- Key Laboratory of Biochar and Soil Improvement of Ministry of Agriculture and Rural Affairs, Shenyang Agricultural University, Shenyang 110866, China
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Zhang H, Zhang K, Duan Y, Sun X, Lin L, An Q, Altaf MM, Zhu Z, Liu F, Jiao Y, Yin J, Xie C, Wang B, Feng H, Zhang X, Li D. Effect of EDDS on the rhizosphere ecology and microbial regulation of the Cd-Cr contaminated soil remediation using king grass combined with Piriformospora indica. JOURNAL OF HAZARDOUS MATERIALS 2024; 465:133266. [PMID: 38118201 DOI: 10.1016/j.jhazmat.2023.133266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 12/08/2023] [Accepted: 12/12/2023] [Indexed: 12/22/2023]
Abstract
The negative impacts of soil heavy metals composite pollution on agricultural production and human health are becoming increasingly prevalent. The applications of green chelating agents and microorganisms have emerged as promising alternate methods for enhancing phytoremediation. The regulatory effects of root secretion composition, microbial carbon source utilization, key gene expression, and soil microbial community structure were comprehensively analyzed through a combination of HPLC, Biolog EcoPlates, qPCR, and high-throughput screening techniques. The application of EDDS resulted in a favorable rhizosphere ecological environment for the king grass Piriformospora indica, characterized by a decrease in soil pH by 0.41 units, stimulation of succinic acid and fumaric acid secretion, and an increase in carbon source metabolic activity of amino acids and carbohydrates. Consequently, this improvement enhanced the bioavailability of Cd/Cr and increased the biomass of king grass by 25.7%. The expression of dissimilatory iron-reducing bacteria was significantly upregulated by 99.2%, while there was no significant difference in Clostridium abundance. Furthermore, the richness of the soil rhizosphere fungal community (Ascomycota: 45.8%, Rozellomycota: 16.7%) significantly increased to regulate the proportion of tolerant microbial dominant groups, promoting the improvement of Cd/Cr removal efficiency (Cd: 23.4%, Cr: 18.7%). These findings provide a theoretical basis for the sustainable development of chelating agent-assisted plants-microorganisms combined remediation of heavy metals in soil.
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Affiliation(s)
- Haixiang Zhang
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Kailu Zhang
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Yali Duan
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Xiaoyan Sun
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Li Lin
- Key Laboratory of Sugarcane Biotechnology and Genetic Improvement (Guangxi) / Guangxi Key Laboratory of Sugarcane Genetic Improvement, Ministry of Agriculture and Rural Affairs, Nanning 530007, China
| | - Qianli An
- State Key Laboratory of Rice Biology and Breeding, Key Laboratory of Molecular Biology of Crop Pathogens and Insects Ministry of Agriculture and Rural Affairs, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Muhammad Mohsin Altaf
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Zhiqiang Zhu
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China.
| | - Fan Liu
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Yangqiu Jiao
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Jing Yin
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Can Xie
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Baijie Wang
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Huiping Feng
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Xin Zhang
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Dong Li
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China; Key Laboratory for Environmental Toxicology of Haikou / Center for Eco-Environmental Restoration aboratory of Marine Resource Utilization in South China Sea / Key Laboratory of Agro-Forestry Environmental Processes and Ecological Regulation of Hainan Province, Hainan University, Haikou 570228, China.
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17
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Yu B, Xu D, Li Y, Wang W. Influence of Fertilization on Growth and Lead Content of Pepper under Lead Stress. PLANTS (BASEL, SWITZERLAND) 2023; 12:2960. [PMID: 37631171 PMCID: PMC10460004 DOI: 10.3390/plants12162960] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/04/2023] [Accepted: 08/07/2023] [Indexed: 08/27/2023]
Abstract
To investigate the effect of fertilization on Pb content in vegetables, pepper was planted in L1645 (the 5 influencing factors are fertilizers (N, P, K), organic fertilizers (sheep manure) and Pb2+; the 4 levels are blank, low, medium and high; a total of 16 treatments) pot orthogonal experiment. The effects of fertilizers on the growth and Pb content in various parts of pepper under Pb stress were analyzed. The results showed that: (1) The Pb content in pepper fruit ranged from 0.011 mg·kg-1 to 0.085 mg·kg-1, which did not exceed the limit value (0.1 mg·kg-1) in the National Standard for Food Safety-Limit of Contaminants in Food (GB2762-2017); (2) The effect order of fertilization on pepper fruit weight was P2O5 > sheep manure > N > K2O; The horizontal combination of factors that promoted the maximum fruit weight of pepper was N (0.15 g·kg-1), P2O5 (0.225 g·kg-1), K2O (0.15 g·kg-1) and sheep manure (9 g·kg-1); (3) The order of fertilizer effects on Pb content in pepper fruit was Pb2+ > K2O > N = sheep manure > P2O5; the factor level combination that resulted in the maximum Pb content in pepper fruits was N (0.15 g·kg-1), P2O5 (0 g·kg-1), K2O (0.45 g·kg-1), sheep manure (6 g·kg-1) and Pb2+ (350 mg·kg-1); (4) Based on the soil fertility characteristics of Urumqi, the recommended optimal fertilizer application rate was: high phosphorus fertilizer P2O5 (495 kg·hm-2), low-level potassium fertilizer K2O (330 kg·hm-2), medium-level nitrogen fertilizer N (660 kg·hm-2) (or low-level nitrogen fertilizer N (330 kg·hm-2) + high-level organic manure sheep manure (19,800 kg·hm-2), which can achieve high yield while ensuring that the Pb content in the fruits does not exceed the standard. Strengthening control of effective and reasonable fertilization methods in Urumqi agricultural land is helpful to reduce the Pb content in vegetables.
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Affiliation(s)
| | | | | | - Wenquan Wang
- College of Resources and Environment Sciences, Xinjiang Agricultural University, Urumqi 830052, China; (B.Y.); (D.X.); (Y.L.)
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