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Ruiz-Ferrer C, Román-Marín LU, Hernández-Hernández JD, Cerda-García-Rojas CM, Joseph-Nathan P. Novel Sesquiterpenoid Skeletons by Wagner-Meerwein Rearrangements of Longipinane-9,13-diol-1-one Derivatives. JOURNAL OF NATURAL PRODUCTS 2021; 84:1087-1095. [PMID: 33733766 DOI: 10.1021/acs.jnatprod.0c01160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The partial or total hydrolysis of (3R,4S,5S,6S,9R,10R,11R)-9,13-diangeloyloxylongipinan-1-one (1), isolated from the roots of Stevia viscida, gave alcohols 2 or 3, respectively, which were subjected to molecular rearrangements with boron trifluoride etherate. Compound 2 afforded (3R,4R,5R,6S,9R,10S,11S)-11,13-oxyneomorelian-1-one (10) and (4S,5R,6S,8S,10R)-10,13-oxyneojiquilp-2-en-1-one (11), both possessing novel sesquiterpenoid skeletons. In turn, 3 provided (3R,4R,5S,6S,9R,11R)-13-hydroxymoreli-10(14)-en-1-one (7) and 10. Acetylation of 3 gave 4, thus allowing reduction of the C-1 carbonyl group to yield 5, which was rearranged to (1S,3R,4S,5S,6S,9R,10R,11R)-13-acetoxy-9,11-epoxyjiquilpane (6), while an attempt to mesylate 3 directly gave rearranged (3R,4R,5S,6S,9R,11R)-13-mesyloxymoreli-10(14)-en-1-one (8) through expulsion of the C-9 mesylate group by the antiperiplanar C-4-C-10 bond migration to C-4-C-9. In addition, treatment of 1 with boron trifluoride etherate generated (3R,4R,5S,6S,9R,11R)-13-angeloyloxymoreli-10(14)-en-1-one (9). The structures of 2-11 were elucidated by 1D and 2D NMR experiments and those of 2, 3, 8, 10, and 11 were confirmed by single-crystal X-ray diffraction analysis.
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Affiliation(s)
- Cecilia Ruiz-Ferrer
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Ciudad Universitaria, Morelia, Michoacán 58030, Mexico
| | - Luisa U Román-Marín
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Ciudad Universitaria, Morelia, Michoacán 58030, Mexico
| | - Juan D Hernández-Hernández
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Ciudad Universitaria, Morelia, Michoacán 58030, Mexico
| | - Carlos M Cerda-García-Rojas
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Apartado 14-740, Mexico City 07000, Mexico
| | - Pedro Joseph-Nathan
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Apartado 14-740, Mexico City 07000, Mexico
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del Río RE, Joseph-Nathan P. Vibrational Circular Dichroism Absolute Configuration of Natural Products From 2015 to 2019. Nat Prod Commun 2021. [DOI: 10.1177/1934578x21996166] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Although demonstrated in 1975, vibrational circular dichroism (VCD) finally started to popularize during this century as a reliable tool to determine the absolute configuration (AC) of organic molecules. This research field continues to be a very dynamic one, in particular for the study of natural products which are a unlimited source of chiral molecules. It therefore turns of interest to summarize the accomplishments published in recent years and to comment on some eventual difficulties that emerged in rare cases to complete the AC determination task. Therefore the aim of this review is to update VCD results for the AC assignment of natural products published from 2015 to 2019, a period in which VCD was reported in some 126 publications involving almost 300 molecules. They are organized according the type of studied metabolite allowing an easily search. The molecules correspond to 28 monoterpenes concerning 17 papers, to 42 sesquiterpenes in 14 papers, to 51 diterpenes in 19 publications, to 5 other terpenoids in three papers, to 48 aromatic molecules in 15 reports, to 20 polyketides in 10 publications, to 27 miscellaneous formulas also in 10 papers, and to 76 nitrogen containing compounds, which include alkaloids and their synthetic analogs, in 38 articles. The landscape of reviewed molecules is quite wide as it goes from simple monoterpenes, like borneol or camphor, to very relevant biological molecules like the alkaloid cocaine or tadalafil samples to distinguish genuine and counterfeit Cialis®. In addition, 5 natural products and a simple derivative published outside the reviewed period, were used to illustrate some aspects of density functional theory calculations.
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Affiliation(s)
- Rosa E. del Río
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Ciudad Universitaria, Morelia, Mexico
| | - Pedro Joseph-Nathan
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mexico City, Mexico
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del Río RE, Pardo-Novoa JC, Cerda-García-Rojas CM, Joseph-Nathan P. Vibrational circular dichroism behavior of quinol cacalolides from Psacalium aff. sinuatum. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.128987] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Liu T, Wu H, Zhang J, Deng W, Yang L. Modified Eremophilanes from Parasenecio hastatus and Their Neuroprotective Activities. JOURNAL OF NATURAL PRODUCTS 2020; 83:185-193. [PMID: 31994874 DOI: 10.1021/acs.jnatprod.9b00217] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The new modified eremophilanes hastatusins A-K (1-11) and 13 known compounds (12-24) were isolated from Parasenecio hastatus. The structures of 1-24 were elucidated based on spectroscopic data analysis and comparison with literature data. The absolute configurations of compounds 1 and 2 were defined by single-crystal X-ray diffraction analysis, and the other new compounds were assigned based on ECD data. This work is the first report of the crystal structure of an 8,9-seco-eremophilanolide (1) with two lactone units. The enantiomers of 1 were separated by chiral-phase HPLC, and the absolute configurations of (-)-1 and (+)-1 were established via experimental and calculated ECD data. The new compounds represent four unusual skeletons: a modified 8,9-seco-eremophilane featuring a rare 6,9;8,12-dilactone moiety (1), a furanoeremophilane-type skeleton (2-7, 11), a rare C14 nor-eremophilane-type skeleton (8, 9), and a modified eremophilane lactone-type skeleton (10). All isolates were assayed for their neuroprotective effects against H2O2-induced SH-SY5Y cell injury, and compounds 2-5, 12, 21, and 23 exhibited activities even at a low concentration of 1 μM. Compounds 6-9, 13, 14, 17, 20, 22, and 24 also showed notable effects at 10 and 100 μM.
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Affiliation(s)
- Tingting Liu
- College of Life and Environmental Sciences , Minzu University of China , Beijing 100081 , People's Republic of China
- State Key Laboratory for Biology of Plant Diseases and Insect Pests , Institute of Plant Protection, Chinese Academy of Agricultural Sciences , Beijing 100193 , People's Republic of China
| | - Haibo Wu
- College of Life and Environmental Sciences , Minzu University of China , Beijing 100081 , People's Republic of China
| | - Jing Zhang
- College of Life and Environmental Sciences , Minzu University of China , Beijing 100081 , People's Republic of China
| | - Wenjie Deng
- College of Life and Environmental Sciences , Minzu University of China , Beijing 100081 , People's Republic of China
| | - Luowenlei Yang
- College of Life and Environmental Sciences , Minzu University of China , Beijing 100081 , People's Republic of China
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Polavarapu PL, Santoro E. Vibrational optical activity for structural characterization of natural products. Nat Prod Rep 2020; 37:1661-1699. [DOI: 10.1039/d0np00025f] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
This review presents the recent progress towards elucidating the structures of chiral natural products and applications using vibrational optical activity (VOA) spectroscopy.
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Armenta-Salinas C, Guzmán-Mejía R, García-Gutiérrez HA, Román-Marín LU, Hernández-Hernández JD, Cerda-García-Rojas CM, Joseph-Nathan P. Novel Sesquiterpene Skeletons by Multiple Wagner-Meerwein Rearrangements of a Longipinane-1,9-diol Derivative. JOURNAL OF NATURAL PRODUCTS 2019; 82:3410-3420. [PMID: 31773961 DOI: 10.1021/acs.jnatprod.9b00784] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
The tricyclic sesquiterpene (1R,3R,4S,5S,7S,8S,9S,10R,11R)-7,8-diangeloyloxylongipinan-1,9-diol, or rasteviol (7), underwent multiple Wagner-Meerwein molecular rearrangements and several hydride shifts when treated with Et2O-BF3 to generate the six new compounds (1R,3R,4S,5R,7S,8S,9S,10R,11S)-7,8-diangeloyloxy-1,9-epoxyjiquilpane (8), (1R,3R,4S,5R,7R,8S,9S,11S)-8-angeloyloxy-1,7-epoxyzamor-10(14)-ene (11), (2S,3R,4R,5R,6R,7R,8S,9S,10S)-7,8-diangeloyloxy-6,9-epoxyjanitziane (14), (4R,5R,7S,8S,9S,10S,11S)-7,8-diangeloyloxy-9-hydroxyjiquilp-3(15)-ene (16), (2S,3S,5R,7S,8R,10S,11R)-7,8-diangeloyloxyiratzian-9-one (18), and (2S,3S,5R,10S,11R)-8-angeloyloxyiratzi-7-en-9-one (22), of which 8, 11, 14, and 18 possess new hydrocarbon skeletons. Their structures were determined by 1D and 2D NMR in combination with single-crystal X-ray diffraction analyses of derivatives 10, 15, 20, and 21, which allowed confirmation of their absolute configurations by means of the Flack and Hooft parameters. In addition, some reaction mechanism information was gained from deuterium labeling experiments.
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Affiliation(s)
- Concepción Armenta-Salinas
- Instituto de Investigaciones Químico Biológicas , Universidad Michoacana de San Nicolás de Hidalgo , Ciudad Universitaria, Morelia , Michoacán , 58030 Mexico
| | - Ramón Guzmán-Mejía
- Instituto de Investigaciones Químico Biológicas , Universidad Michoacana de San Nicolás de Hidalgo , Ciudad Universitaria, Morelia , Michoacán , 58030 Mexico
| | - Hugo A García-Gutiérrez
- Instituto de Investigaciones Químico Biológicas , Universidad Michoacana de San Nicolás de Hidalgo , Ciudad Universitaria, Morelia , Michoacán , 58030 Mexico
| | - Luisa U Román-Marín
- Instituto de Investigaciones Químico Biológicas , Universidad Michoacana de San Nicolás de Hidalgo , Ciudad Universitaria, Morelia , Michoacán , 58030 Mexico
| | - Juan D Hernández-Hernández
- Instituto de Investigaciones Químico Biológicas , Universidad Michoacana de San Nicolás de Hidalgo , Ciudad Universitaria, Morelia , Michoacán , 58030 Mexico
| | - Carlos M Cerda-García-Rojas
- Departamento de Química , Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional , Apartado 14-740 , Mexico City , 07000 Mexico
| | - Pedro Joseph-Nathan
- Departamento de Química , Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional , Apartado 14-740 , Mexico City , 07000 Mexico
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Burgueño-Tapia E, Joseph-Nathan P. Vibrational Circular Dichroism: Recent Advances for the Assignment of the Absolute Configuration of Natural Products. Nat Prod Commun 2017. [DOI: 10.1177/1934578x1701200501] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Vibrational circular dichroism (VCD) emerged during the last decade as a reliable tool for the absolute configuration (AC) determination of organic compounds. The principles, instrumentation, and methodology applied prior to early 2013 were recently reviewed by us. Since VCD is a very dynamic field, the aim of this review is to update VCD advances for the AC assignment of terpenoids, aromatic compounds, alkaloids, and other natural products for the 2013–2014 period, when VCD was applied to the AC assignment of some 70 natural products. In addition, although discovered in 2012, a brief introduction to the VCD exciton coupling approach and its applications in natural products AC assignment is presented.
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Affiliation(s)
- Eleuterio Burgueño-Tapia
- Departamento de Química Orgánica, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prolongación de Carpio y Plan de Ayala, Col. Santo Tomás, México D.F., 11340 Mexico
| | - Pedro Joseph-Nathan
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Apartado 14–740, México D.F., 07000 Mexico
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Gorunova ON, Novitskiy IM, Grishin YK, Gloriozov IP, Roznyatovsky VA, Khrustalev VN, Kochetkov KA, Dunina VV. Determination of the Absolute Configuration of CN-Palladacycles by 31P{1H} NMR Spectroscopy Using (1R,2S,5R)-Menthyloxydiphenylphosphine as the Chiral Derivatizing Agent: Efficient Chirality Transfer in Phosphinite Adducts. Organometallics 2016. [DOI: 10.1021/acs.organomet.5b00706] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Olga N. Gorunova
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Vavilova Street 28, 119991 Moscow, Russian Federation
| | - Ivan M. Novitskiy
- Department
of Chemistry, M.V. Lomonosov Moscow State University, Lenin Hills, 119991, Moscow, Russian Federation
| | - Yuri K. Grishin
- Department
of Chemistry, M.V. Lomonosov Moscow State University, Lenin Hills, 119991, Moscow, Russian Federation
| | - Igor P. Gloriozov
- Department
of Chemistry, M.V. Lomonosov Moscow State University, Lenin Hills, 119991, Moscow, Russian Federation
| | - Vitaly A. Roznyatovsky
- Department
of Chemistry, M.V. Lomonosov Moscow State University, Lenin Hills, 119991, Moscow, Russian Federation
| | - Victor N. Khrustalev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Vavilova Street 28, 119991 Moscow, Russian Federation
- Inorganic Chemistry Department, Peoples’ Friendship University of Russia, Miklukho-Maklay Street 6, 117198 Moscow, Russian Federation
| | - Konstantin A. Kochetkov
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Vavilova Street 28, 119991 Moscow, Russian Federation
| | - Valery V. Dunina
- Department
of Chemistry, M.V. Lomonosov Moscow State University, Lenin Hills, 119991, Moscow, Russian Federation
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Burgueño-Tapia E, Joseph-Nathan P. Vibrational Circular Dichroism: Recent Advances for the Assignment of the Absolute Configuration of Natural Products. Nat Prod Commun 2015. [DOI: 10.1177/1934578x1501001036] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Vibrational circular dichroism (VCD) emerged during the last decade as a reliable tool for the absolute configuration (AC) determination of organic compounds. The principles, instrumentation, and methodology applied prior to early 2013 were recently reviewed by us. Since VCD is a very dynamic field, the aim of this review is to update VCD advances for the AC assignment of terpenoids, aromatic compounds, alkaloids, and other natural products for the 2013-2014 period, when VCD was applied to the AC assignment of some 70 natural products. In addition, although discovered in 2012, a brief introduction to the VCD exciton coupling approach and its applications in natural products AC assignment is presented.
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Affiliation(s)
- Eleuterio Burgueño-Tapia
- Departamento de Quimica Orgdnica, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico National, Prolongatión de Carpio y Plan de Ayala, Col. Santo Tomás, México D.F., 11340 Mexico
| | - Pedro Joseph-Nathan
- Departamento de Química, Centro de Investigatión y de Estudios Avanzados del Instituto Politécnico Nacional, Apartado 14-740, México D.F., 07000 Mexico
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