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Gupta A, Saulanki P, Bharatam PV. Neutral Cyclic Nitreones: Electronic Structure Analysis Reveals an Unorthodox Perspective of Several Zwitterionic Heterocyclic Species. J Phys Chem A 2025; 129:2854-2865. [PMID: 40065583 DOI: 10.1021/acs.jpca.4c08235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2025]
Abstract
Nitreones are compounds with the general formula L → N+ ← L'. These compounds exhibit medicinal properties and have found applications in phase transfer catalysis. A few nitreones are cyclic; protonated cycloguanil (an antimalarial agent) is the most prominent example. Recently, a few more cyclic compounds were experimentally reported, in which the central N+ was shown to exhibit nitreone character. This led to attention being paid to the chemistry of neutral cyclic nitreones. A thorough literature search led to two sets of cyclic nitreones: C → N ← C type and P → N ← P type. In this work, we report quantum chemical analysis in exploring the electronic structure of neutral cyclic nitreones. Molecular orbital analysis, electron density analysis, charge, electron localization function (ELF), complexation energy values, and Tolman electronic parameter (TEP) all indicate that the studied compounds do carry nitrogen in the N(I) oxidation state and the two lone pairs are at the central nitrogen; thus, they qualify to be considered as cyclic nitreones.
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Affiliation(s)
- Astha Gupta
- Department of Medicinal Chemistry, National Institute of Pharmaceutical Education and Research, Sector 67, S.A.S. Nagar, Mohali 160062 Punjab, India
| | - Pooja Saulanki
- Department of Medicinal Chemistry, National Institute of Pharmaceutical Education and Research, Sector 67, S.A.S. Nagar, Mohali 160062 Punjab, India
| | - Prasad V Bharatam
- Department of Medicinal Chemistry, National Institute of Pharmaceutical Education and Research, Sector 67, S.A.S. Nagar, Mohali 160062 Punjab, India
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Golovanov IS, Sukhorukov AY. Merging Boron with Nitrogen-Oxygen Bonds: A Review on BON Heterocycles. Top Curr Chem (Cham) 2021; 379:8. [PMID: 33544252 DOI: 10.1007/s41061-020-00317-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 11/20/2020] [Indexed: 11/25/2022]
Abstract
Cyclic boronate esters play important roles in organic synthesis, pharmacology, supramolecular chemistry and materials science owing to their stability in air and versatile reactivity. Most of these compounds contain a B-O-C linkage with an alkoxy- or carboxylate group bound to the boron atom (e.g. boronate-diol esters, MIDA boronates). Boron chelates comprising a B-O-N motif (BON heterocycles) are much less explored, although first representatives of this class were prepared in the early 1960s. In recent years, there has been a growing interest in BON heterocycles as new chemotypes for drug design. The exocyclic B-O-N linkage, which is readily formed under mild conditions, shows surprising hydrolytic and thermal resistance. This allows the formation of BON heterocycles to be used as click-type reactions for the preparation of bioconjugates and functionally modified polymers. We believe that BON heterocycles are promising yet underrated organoboron derivatives. This review summarizes the scattered information about known types of BON heterocycles, including their synthesis, reactivity and structural data. Available applications of BON heterocycles in materials science and medicinal chemistry, along with their prospects, are also discussed. The bibliography contains 289 references.
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Affiliation(s)
- Ivan S Golovanov
- Laboratory of Organic and Metal-Organic Nitrogen-Oxygen Systems, N. D. Zelinsky Institute of Organic Chemistry, Leninsky prospect, 47, 119991, Moscow, Russia.
| | - Alexey Yu Sukhorukov
- Laboratory of Organic and Metal-Organic Nitrogen-Oxygen Systems, N. D. Zelinsky Institute of Organic Chemistry, Leninsky prospect, 47, 119991, Moscow, Russia.
- Department of Innovational Materials and Technologies Chemistry, Plekhanov Russian University of Economics, Stremyanny lane, 36, 117997, Moscow, Russia.
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Deng G, Pan S, Jin J, Wang G, Zhao L, Zhou M, Frenking G. Generation and Identification of the Linear OCBNO and OBNCO Molecules with 24 Valence Electrons. Chemistry 2021; 27:412-418. [PMID: 33104262 PMCID: PMC7839540 DOI: 10.1002/chem.202003886] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2020] [Indexed: 11/23/2022]
Abstract
Two structural isomers containing five second-row element atoms with 24 valence electrons were generated and identified by matrix-isolation IR spectroscopy and quantum chemical calculations. The OCBNO complex, which is produced by the reaction of boron atoms with mixtures of carbon monoxide and nitric oxide in solid neon, rearranges to the more stable OBNCO isomer on UV excitation. Bonding analysis indicates that the OCBNO complex is best described by the bonding interactions between a triplet-state boron cation with an electron configuration of (2s)0 (2pσ )0 (2pπ )2 and the CO/NO- ligands in the triplet state forming two degenerate electron-sharing π bonds and two ligand-to-boron dative σ bonds.
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Affiliation(s)
- Guohai Deng
- Collaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryShanghai Key Laboratory of, Molecular Catalysts and Innovative MaterialsFudan UniversityShanghai200438P.R. China
| | - Sudip Pan
- Institute of Advanced SynthesisSchool of Chemistry and Molecular EngineeringNanjing Tech UniversityNanjing211816P.R. China
- Fachbereich ChemiePhilipps-Universität MarburgHans-Meerwein-Strasse 435043MarburgGermany
| | - Jiaye Jin
- Collaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryShanghai Key Laboratory of, Molecular Catalysts and Innovative MaterialsFudan UniversityShanghai200438P.R. China
| | - Guanjun Wang
- Collaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryShanghai Key Laboratory of, Molecular Catalysts and Innovative MaterialsFudan UniversityShanghai200438P.R. China
| | - Lili Zhao
- Institute of Advanced SynthesisSchool of Chemistry and Molecular EngineeringNanjing Tech UniversityNanjing211816P.R. China
| | - Mingfei Zhou
- Collaborative Innovation Center of Chemistry for Energy MaterialsDepartment of ChemistryShanghai Key Laboratory of, Molecular Catalysts and Innovative MaterialsFudan UniversityShanghai200438P.R. China
| | - Gernot Frenking
- Institute of Advanced SynthesisSchool of Chemistry and Molecular EngineeringNanjing Tech UniversityNanjing211816P.R. China
- Fachbereich ChemiePhilipps-Universität MarburgHans-Meerwein-Strasse 435043MarburgGermany
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Lu B, Song C, Qian W, Wu Z, Császár AG, Zeng X. Heterocumulenic carbene nitric oxide radical OCCNO˙. Chem Commun (Camb) 2019; 55:13510-13513. [PMID: 31584053 DOI: 10.1039/c9cc07056g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The elusive heterocumulenic radical OCCNO˙ and its isotopologues OC13CNO˙ and OCC15NO˙ have been prepared by reacting photolytically generated unsaturated carbene OCC/OC13C with ˙NO/15˙NO in cryogenic N2-, Ar-, and Ne-matrices. Upon UV-light (365 nm) irradiation, the C-C bond in OCCNO˙ breaks and yields a long-sought ground-state radical CNO˙ (X2Π), which has also been identified with matrix-isolation infrared spectroscopy.
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Affiliation(s)
- Bo Lu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123 Suzhou, China.
| | - Chao Song
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123 Suzhou, China.
| | - Weiyu Qian
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123 Suzhou, China.
| | - Zhuang Wu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123 Suzhou, China.
| | - Attila G Császár
- MTA-ELTE Complex Chemical Systems Research Group, Laboratory of Molecular Structure and Dynamics, Institute of Chemistry, ELTE Eötvös Loránd University, Pázmány Péter sétány 1/A, H-1117 Budapest, Hungary
| | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, 215123 Suzhou, China. and Department of Chemistry, Fudan University, 200433 Shanghai, China.
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Loan HTP, Van Duc H, Quang DT, Cong VT, Van Tat P, Trung NT, Nhung NTA. Theoretical exploitation of donor-acceptor ability in low-valent group-14 elements complexes [E(PPh 3
) 2
→ SiH 2
] 2+
(E = C to Pb) using energy decomposition analysis. VIETNAM JOURNAL OF CHEMISTRY 2019. [DOI: 10.1002/vjch.201900078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Huynh Thi Phuong Loan
- Department of Chemistry; University of Sciences, Hue University; Hue City 530000 Viet Nam
| | - Hoang Van Duc
- Department of Chemistry; University of Education, Hue University; Hue City 530000 Viet Nam
| | - Duong Tuan Quang
- Department of Chemistry; University of Education, Hue University; Hue City 530000 Viet Nam
| | - Vo Thanh Cong
- Department of Chemical Engineering; Industrial University of Ho Chi Minh City; Ho Chi Minh City 700000 Viet Nam
| | - Pham Van Tat
- Faculty of Science and Engineering; Hoa Sen University; Ho Chi Minh City 700000 Viet Nam
| | - Nguyen Tien Trung
- Laboratory of Computational Chemistry and Modeling, Department of Chemistry; Quy Nhon University; Quy Nhon City 820000 Viet Nam
| | - Nguyen Thi Ai Nhung
- Department of Chemistry; University of Sciences, Hue University; Hue City 530000 Viet Nam
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Wu Z, Liu Q, Xu J, Sun H, Li D, Song C, Andrada DM, Frenking G, Trabelsi T, Francisco JS, Zeng X. Heterocumulene Sulfinyl Radical OCNSO. Angew Chem Int Ed Engl 2017; 56:2140-2144. [PMID: 28074625 DOI: 10.1002/anie.201611576] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Zhuang Wu
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Qifan Liu
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Jian Xu
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Hailong Sun
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Dingqing Li
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Chao Song
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Diego M. Andrada
- Fachbereich Chemie; Philipps-Universität Marburg; 35032 Marburg Germany
| | - Gernot Frenking
- Fachbereich Chemie; Philipps-Universität Marburg; 35032 Marburg Germany
| | | | | | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
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Wu Z, Liu Q, Xu J, Sun H, Li D, Song C, Andrada DM, Frenking G, Trabelsi T, Francisco JS, Zeng X. Heterocumulene Sulfinyl Radical OCNSO. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611576] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Zhuang Wu
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Qifan Liu
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Jian Xu
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Hailong Sun
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Dingqing Li
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Chao Song
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
| | - Diego M. Andrada
- Fachbereich Chemie; Philipps-Universität Marburg; 35032 Marburg Germany
| | - Gernot Frenking
- Fachbereich Chemie; Philipps-Universität Marburg; 35032 Marburg Germany
| | | | | | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science; Soochow University; Suzhou 215123 China
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Celik MA, Frenking G, Neumüller B, Petz W. Exploiting the Twofold Donor Ability of Carbodiphosphoranes: Theoretical Studies of [(PPh3)2C→EH2]q(Eq=Be, B+, C2+, N3+, O4+) and Synthesis of the Dication [(Ph3P)2CCH2]2+. Chempluschem 2013; 78:1024-1032. [DOI: 10.1002/cplu.201300169] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2013] [Indexed: 11/06/2022]
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Nguyen TAN, Frenking G. Transition-Metal Complexes of Tetrylones [(CO)5W-E(PPh3)2] and Tetrylenes [(CO)5W-NHE] (E=C-Pb): A Theoretical Study. Chemistry 2012; 18:12733-48. [DOI: 10.1002/chem.201200741] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2012] [Revised: 05/22/2012] [Indexed: 12/29/2022]
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Celik MA, Sure R, Klein S, Kinjo R, Bertrand G, Frenking G. Borylene complexes (BH)L2 and nitrogen cation complexes (N+)L2: isoelectronic homologues of carbones CL2. Chemistry 2012; 18:5676-92. [PMID: 22434609 DOI: 10.1002/chem.201103965] [Citation(s) in RCA: 121] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2011] [Indexed: 11/08/2022]
Abstract
Quantum chemical calculations using DFT (BP86, M05-2X) and ab initio methods (CCSD(T), SCS-MP2) have been carried out on the borylene complexes (BH)L(2) and nitrogen cation complexes (N(+))L(2) with the ligands L=CO, N(2), PPh(3), NHC(Me), CAAC, and CAAC(model). The results are compared with those obtained for the isoelectronic carbones CL(2). The geometries and bond dissociation energies of the ligands, the proton affinities, and adducts with the Lewis acids BH(3) and AuCl were calculated. The nature of the bonding has been analyzed with charge and energy partitioning methods. The calculated borylene complexes (BH)L(2) have trigonal planar coordinated boron atoms which possess rather short B-L bonds. The calculated bond dissociation energies (BDEs) of the ligands for complexes where L is a carbene (NHC or CAAC) are very large (D(e) =141.6-177.3 kcal mol(-1)) which suggest that such species might become isolated in a condensed phase. The borylene complexes (BH)(PPh(3))(2) and (BH)(CO)(2) have intermediate bond strengths (D(e) =90.1 and 92.6 kcal mol(-1)). Substituted homologues with bulky groups at boron which protect the boron atom from electrophilic attack might also be stable enough to become isolated. The BDE of (BH)(N(2))(2) is much smaller (D(e) =31.9 kcal mol(-1)), but could become observable in a low-temperature matrix. The proton affinities of the borylene complexes are very large, particularly for the bulky adducts with L=PPh(3), NHC(Me), CAAC(model) and CAAC and thus, they are superbases. All (BH)L(2) molecules bind strongly AuCl either η(1) (L=N(2), PPh(3), NHC(Me), CAAC) or η(2) (L=CO, CAAC(model)). The BDEs of H(3)B-(BH)L(2) adducts which possess a hitherto unknown boron→boron donor-acceptor bond are smaller than for the AuCl complexes. The strongest bonded BH(3) adduct that might be isolable is (BH)(PPh(3))(2)-BH(3) (D(e) =36.2 kcal mol(-1)). The analysis of the bonding situation reveals that (BH)-L(2) bonding comes mainly from the orbital interactions which has three major contributions, that is, the donation from the symmetric (σ) and antisymmetric (π(||)) combination of the ligand lone-pair orbitals into the vacant MOs of BH L→(BH)←L and the L←(BH)→L π backdonation from the boron lone-pair orbital. The nitrogen cation complexes (N(+))L(2) have strongly bent L-N-L geometries, in which the calculated bending angle varies between 113.9° (L=N(2)) and 146.9° (L=CAAC). The BDEs for (N(+))L(2) are much larger than those of the borylene complexes. The carbene ligands NHC and CAAC but also the phosphane ligands PPh(3) bind very strongly between D(e) =358.4 kcal mol(-1) (L=PPh(3)) and D(e) =412.5 kcal mol(-1) (L=CAAC(model)). The proton affinities (PA) of (N(+))L(2) are much smaller and they bind AuCl and BH(3) less strongly compared with (BH)L(2). However, the PAs (N(+))L(2) for complexes with bulky ligands L are still between 139.9 kcal mol(-1) (L=CAAC(model)) and 168.5 kcal mol(-1) (L=CAAC). The analysis of the (N(+))-L(2) bonding situation reveals that the binding interactions come mainly from the L→(N(+))←L donation while L←(N(+) )→L π backdonation is rather weak.
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Pyykkö P. Predicting new, simple inorganic species by quantum chemical calculations: some successes. Phys Chem Chem Phys 2012; 14:14734-42. [DOI: 10.1039/c2cp24003c] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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