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Taiwo OR, Onyeaka H, Oladipo EK, Oloke JK, Chukwugozie DC. Advancements in Predictive Microbiology: Integrating New Technologies for Efficient Food Safety Models. Int J Microbiol 2024; 2024:6612162. [PMID: 38799770 PMCID: PMC11126350 DOI: 10.1155/2024/6612162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 04/01/2024] [Accepted: 04/23/2024] [Indexed: 05/29/2024] Open
Abstract
Predictive microbiology is a rapidly evolving field that has gained significant interest over the years due to its diverse application in food safety. Predictive models are widely used in food microbiology to estimate the growth of microorganisms in food products. These models represent the dynamic interactions between intrinsic and extrinsic food factors as mathematical equations and then apply these data to predict shelf life, spoilage, and microbial risk assessment. Due to their ability to predict the microbial risk, these tools are also integrated into hazard analysis critical control point (HACCP) protocols. However, like most new technologies, several limitations have been linked to their use. Predictive models have been found incapable of modeling the intricate microbial interactions in food colonized by different bacteria populations under dynamic environmental conditions. To address this issue, researchers are integrating several new technologies into predictive models to improve efficiency and accuracy. Increasingly, newer technologies such as whole genome sequencing (WGS), metagenomics, artificial intelligence, and machine learning are being rapidly adopted into newer-generation models. This has facilitated the development of devices based on robotics, the Internet of Things, and time-temperature indicators that are being incorporated into food processing both domestically and industrially globally. This study reviewed current research on predictive models, limitations, challenges, and newer technologies being integrated into developing more efficient models. Machine learning algorithms commonly employed in predictive modeling are discussed with emphasis on their application in research and industry and their advantages over traditional models.
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Affiliation(s)
| | - Helen Onyeaka
- School of Chemical Engineering, University of Birmingham, Edgbaston B15 2TT, Birmingham, UK
| | - Elijah K. Oladipo
- Genomics Unit, Helix Biogen Institute, Ogbomosho, Oyo, Nigeria
- Department of Microbiology, Laboratory of Molecular Biology, Immunology and Bioinformatics, Adeleke University, Ede, Osun, Nigeria
| | - Julius Kola Oloke
- Department of Natural Science, Microbiology Unit, Precious Cornerstone University, Ibadan, Oyo, Nigeria
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Varrà MO, Conter M, Recchia M, Alborali GL, Maisano AM, Ghidini S, Zanardi E. Feasibility of Near-Infrared Spectroscopy in the Classification of Pig Lung Lesions. Vet Sci 2024; 11:181. [PMID: 38668448 PMCID: PMC11053972 DOI: 10.3390/vetsci11040181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Revised: 04/03/2024] [Accepted: 04/16/2024] [Indexed: 04/29/2024] Open
Abstract
Respiratory diseases significantly affect intensive pig farming, causing production losses and increased antimicrobial use. Accurate classification of lung lesions is crucial for effective diagnostics and disease management. The integration of non-destructive and rapid techniques would be beneficial to enhance overall efficiency in addressing these challenges. This study investigates the potential of near-infrared (NIR) spectroscopy in classifying pig lung tissues. The NIR spectra (908-1676 nm) of 101 lungs from weaned pigs were analyzed using a portable instrument and subjected to multivariate analysis. Two distinct discriminant models were developed to differentiate normal (N), congested (C), and pathological (P) lung tissues, as well as catarrhal bronchopneumonia (CBP), fibrinous pleuropneumonia (FPP), and interstitial pneumonia (IP) patterns. Overall, the model tailored for discriminating among pathological lesions demonstrated superior classification performances. Major challenges arose in categorizing C lungs, which exhibited a misclassification rate of 30% with N and P tissues, and FPP samples, with 30% incorrectly recognized as CBP samples. Conversely, IP and CBP lungs were all identified with accuracy, precision, and sensitivity higher than 90%. In conclusion, this study provides a promising proof of concept for using NIR spectroscopy to recognize and categorize pig lungs with different pathological lesions, offering prospects for efficient diagnostic strategies.
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Affiliation(s)
- Maria Olga Varrà
- Department of Food and Drug, University of Parma, Strada del Taglio 10, 43126 Parma, Italy; (M.O.V.); (E.Z.)
| | - Mauro Conter
- Department of Veterinary Science, University of Parma, Strada del Taglio 10, 43126 Parma, Italy
| | - Matteo Recchia
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia-Romagna-Headquarters, Via A. Bianchi, 9, 25124 Brescia, Italy; (G.L.A.); (A.M.M.)
| | - Giovanni Loris Alborali
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia-Romagna-Headquarters, Via A. Bianchi, 9, 25124 Brescia, Italy; (G.L.A.); (A.M.M.)
| | - Antonio Marco Maisano
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia-Romagna-Headquarters, Via A. Bianchi, 9, 25124 Brescia, Italy; (G.L.A.); (A.M.M.)
| | - Sergio Ghidini
- Department of Veterinary Medicine and Animal Sciences, Via dell’Università 6, 26900 Lodi, Italy;
| | - Emanuela Zanardi
- Department of Food and Drug, University of Parma, Strada del Taglio 10, 43126 Parma, Italy; (M.O.V.); (E.Z.)
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Ghidini S, De Luca S, Rinaldi E, Zanardi E, Ianieri A, Guadagno F, Alborali GL, Meemken D, Conter M, Varrà MO. Comparing Visual-Only and Visual-Palpation Post-Mortem Lung Scoring Systems in Slaughtering Pigs. Animals (Basel) 2023; 13:2419. [PMID: 37570228 PMCID: PMC10417645 DOI: 10.3390/ani13152419] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 07/19/2023] [Accepted: 07/25/2023] [Indexed: 08/13/2023] Open
Abstract
Respiratory diseases continue to pose significant challenges in pig production, and the assessment of lung lesions at the abattoir can provide valuable data for epidemiological investigations and disease surveillance. The evaluation of lung lesions at slaughter is a relatively simple, fast, and straightforward process but variations arising from different abattoirs, observers, and scoring methods can introduce uncertainty; moreover, the presence of multiple scoring systems complicates the comparisons of different studies, and currently, there are limited studies that compare these systems among each other. The objective of this study was to compare validated, simplified, and standardized schemes for assessing surface-related lung lesions in slaughtered pigs and analyze their reliability under field conditions. This study was conducted in a high-throughput abattoir in Italy, where two different scoring methods (Madec and Blaha) were benchmarked using 637 plucks. Statistical analysis revealed a good agreement between the two methods when severe or medium lesions were observed; however, their ability to accurately identify healthy lungs and minor injuries diverged significantly. These findings demonstrate that the Blaha method is more suitable for routine surveillance of swine respiratory diseases, whereas the Madec method can give more detailed and reliable results for the respiratory and welfare status of the animals at the farm level.
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Affiliation(s)
- Sergio Ghidini
- Department of Food and Drug, University of Parma, Via del Taglio 10, 43126 Parma, Italy; (S.G.); (S.D.L.); (E.R.); (E.Z.); (A.I.); (M.O.V.)
| | - Silvio De Luca
- Department of Food and Drug, University of Parma, Via del Taglio 10, 43126 Parma, Italy; (S.G.); (S.D.L.); (E.R.); (E.Z.); (A.I.); (M.O.V.)
| | - Elena Rinaldi
- Department of Food and Drug, University of Parma, Via del Taglio 10, 43126 Parma, Italy; (S.G.); (S.D.L.); (E.R.); (E.Z.); (A.I.); (M.O.V.)
| | - Emanuela Zanardi
- Department of Food and Drug, University of Parma, Via del Taglio 10, 43126 Parma, Italy; (S.G.); (S.D.L.); (E.R.); (E.Z.); (A.I.); (M.O.V.)
| | - Adriana Ianieri
- Department of Food and Drug, University of Parma, Via del Taglio 10, 43126 Parma, Italy; (S.G.); (S.D.L.); (E.R.); (E.Z.); (A.I.); (M.O.V.)
| | - Federica Guadagno
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia-Romagna-Headquarters, Via A. Bianchi, 9, 25124 Brescia, Italy; (F.G.); (G.L.A.)
| | - Giovanni Loris Alborali
- Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia-Romagna-Headquarters, Via A. Bianchi, 9, 25124 Brescia, Italy; (F.G.); (G.L.A.)
| | - Diana Meemken
- Department of Veterinary Medicine, Institute of Food Safety and Food Hygiene, Freie Universität Berlin, 14163 Berlin, Germany;
| | - Mauro Conter
- Department of Veterinary Science, University of Parma, Via del Taglio 10, 43126 Parma, Italy
| | - Maria Olga Varrà
- Department of Food and Drug, University of Parma, Via del Taglio 10, 43126 Parma, Italy; (S.G.); (S.D.L.); (E.R.); (E.Z.); (A.I.); (M.O.V.)
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Ferri M, Blagojevic B, Maurer P, Hengl B, Guldimann C, Mojsova S, Sakaridis I, Antunovic B, Gomes-Neves E, Zdolec N, Vieira-Pinto M, Johler S. Risk based meat safety assurance system – An introduction to key concepts for future training of official veterinarians. Food Control 2023. [DOI: 10.1016/j.foodcont.2022.109552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Sandberg M, Ghidini S, Alban L, Dondona AC, Blagojevic B, Bouwknegt M, Lipman L, Dam JS, Nastasijevic I, Antic D. Applications of computer vision systems for meat safety assurance in abattoirs: A systematic review. Food Control 2023. [DOI: 10.1016/j.foodcont.2023.109768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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Salmonella enterica prevalence, serotype diversity, antimicrobial resistance and control in the European pork production chain. Trends Food Sci Technol 2023. [DOI: 10.1016/j.tifs.2022.12.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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Cavalheiro LG, Gené LA, Coldebella A, Kich JD, Ruiz VLDA. Microbiological Quality of Pig Carcasses in a Slaughterhouse under Risk-Based Inspection System. Foods 2022; 11:foods11243986. [PMID: 36553728 PMCID: PMC9778288 DOI: 10.3390/foods11243986] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 12/01/2022] [Accepted: 12/03/2022] [Indexed: 12/13/2022] Open
Abstract
Meat product inspection is one of the procedures adopted more than a century ago to guarantee food quality and safety for consumption. Due to technology and regulation advancement for farming and slaughtering pigs, a change in zoonotic profile attributed to pork has been identified. Thus, a global movement began to establish inspection parameters based on epidemiological risk profiles, culminating in the publication of a new regulation in Brazil in 2018. This normative instruction establishes that slaughterhouses under federal inspection must implement risk-based inspection until 2028. Changes in the inspection system can generate questions and objections on the part of customers and consumer markets. In order to assess microbiological contamination when adopting a risk-based inspection system, the occurrence of Salmonella spp. and the quantification of Enterobacteriaceae and mesophilic aerobic counts were compared in pig carcasses slaughtered under traditional and risk-based inspection systems. A statistical significance reduction was identified regarding the quantification of Enterobacteriaceae (log -0.18 to -1.61 CFU/cm2) and mesophilic aerobic counts (log 4.60 to 3.49 CFU/cm2). The occurrence of Salmonella spp. did not show a significant difference (4% to 5.3%). The results allowed us to conclude that adopting risk-based inspection systems improves food safety through Enterobacteriaceae and mesophilic aerobic counts reduction.
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Affiliation(s)
- Luciana Giacometti Cavalheiro
- School of Animal Science and Food Engineering, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga 13635-900, Brazil
- Correspondence: ; Tel.: +55-16-98169-1133
| | - Luisa Aneiros Gené
- Department of Food Science, State University of Campinas, Cidade Universitária Zeferino Vaz, Campinas 13083-970, Brazil
| | - Arlei Coldebella
- Embrapa Suínos e Aves, BR153, km 110, Concórdia 89715-899, Brazil
| | - Jalusa Deon Kich
- Embrapa Suínos e Aves, BR153, km 110, Concórdia 89715-899, Brazil
| | - Vera Letticie de Azevedo Ruiz
- School of Animal Science and Food Engineering, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga 13635-900, Brazil
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Meat safety legislation and its opportunities and hurdles for innovative approaches: A review. Food Control 2022; 141:109160. [DOI: 10.1016/j.foodcont.2022.109160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 05/26/2022] [Accepted: 06/05/2022] [Indexed: 11/21/2022]
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A comparison of food safety conformity between cattle and pig slaughterhouses. Food Control 2022. [DOI: 10.1016/j.foodcont.2022.109143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Additional post-mortem inspection procedures and laboratory methods as supplements for visual meat inspection of finishing pigs in Europe—Use and variability. J Verbrauch Lebensm 2022. [DOI: 10.1007/s00003-022-01391-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
AbstractIn the EU, a post-mortem inspection of finishing pigs comprises visual inspections of the carcass and offal followed by additional examinations, such as palpation and incision of parts, when needed. Moreover, it can include various laboratory tests. Since European meat inspection is regulated by the EU, one may assume that post-mortem inspection is performed in the same way in the Member States. However, previous studies showed that variations exist. This article shows the results of a survey performed in September 2020 on how visual meat inspection of finishing pigs is applied in Europe. By using a questionnaire, palpations, incisions and other procedures for 10 gross pathological findings and laboratory methods applied by official veterinarians to evaluate the fitness of meat for human consumption were assessed. We received 44 responses from 26 European countries. Most respondents reported that visual meat inspection was a generally applied inspection method. The main reason for not applying visual meat inspection was export requirements. The most important reasons for applying palpations and incisions in addition to visual inspection were findings detected in ante- or post-mortem inspection. There was considerable variation in the use of palpations and incisions, other post-mortem procedures and laboratory tests to assess meat fitness for human consumption. The respondents mentioned some country-specific practices, but we also observed variations within the responding official veterinarians that could not be explained by country of origin or years of work experience. Additional detailed studies on the variation are needed before harmonisation of meat inspection procedures are attempted.
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Różycki M, Korpysa-Dzirba W, Bełcik A, Pelec T, Mazurek J, Cencek T. Analysis of a Trichinellosis Outbreak in Poland after Consumption of Sausage Made of Wild Boar Meat. J Clin Med 2022; 11:jcm11030485. [PMID: 35159937 PMCID: PMC8836394 DOI: 10.3390/jcm11030485] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 01/13/2022] [Accepted: 01/17/2022] [Indexed: 02/06/2023] Open
Abstract
An outbreak of trichinellosis due to the consumption of sausage made from wild boar meat unexamined for the presence of Trichinella spp. was reported in Poland in December 2020. The outbreak affected eight people. Examination of the sausages made of wild boar meat collected during epidemiological investigation indicated a high level of Trichinella spp. Larvae per gram (>30 lpg) and therefore the threat of an infection in humans after consumption of such product was significant. Over the years, the main source of trichinellosis in Poland has been wild boar meat, and the majority of trichinellosis cases were related to the consumption of traditional raw meat products such as Polish sausage. Taking this into account, there is the need for better education of consumers in the Trichinella spp. endemic regions and among cultures consuming traditional raw meat products.
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Affiliation(s)
- Mirosław Różycki
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantow Avenue 57, 24-100 Pulawy, Poland; (M.R.); (A.B.); (T.C.)
| | - Weronika Korpysa-Dzirba
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantow Avenue 57, 24-100 Pulawy, Poland; (M.R.); (A.B.); (T.C.)
- Correspondence:
| | - Aneta Bełcik
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantow Avenue 57, 24-100 Pulawy, Poland; (M.R.); (A.B.); (T.C.)
| | - Tomasz Pelec
- Department of Internal Medicine and Diagnostics, Faculty of Veterinary Medicine and Animal Sciences, Poznan University of Life Sciences, 60-637 Poznan, Poland;
| | - Justyna Mazurek
- Department of Epidemiology, Voivodship State Sanitary-Epidemiological Station in Poznan, 61-705 Poznan, Poland;
| | - Tomasz Cencek
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantow Avenue 57, 24-100 Pulawy, Poland; (M.R.); (A.B.); (T.C.)
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