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S S, Rufus NHA. Investigation on ultrasound images for detection of fetal congenital heart defects. Biomed Phys Eng Express 2024; 10:042001. [PMID: 38781934 DOI: 10.1088/2057-1976/ad4f91] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Accepted: 05/23/2024] [Indexed: 05/25/2024]
Abstract
Congenital heart defects (CHD) are one of the serious problems that arise during pregnancy. Early CHD detection reduces death rates and morbidity but is hampered by the relatively low detection rates (i.e., 60%) of current screening technology. The detection rate could be increased by supplementing ultrasound imaging with fetal ultrasound image evaluation (FUSI) using deep learning techniques. As a result, the non-invasive foetal ultrasound image has clear potential in the diagnosis of CHD and should be considered in addition to foetal echocardiography. This review paper highlights cutting-edge technologies for detecting CHD using ultrasound images, which involve pre-processing, localization, segmentation, and classification. Existing technique of preprocessing includes spatial domain filter, non-linear mean filter, transform domain filter, and denoising methods based on Convolutional Neural Network (CNN); segmentation includes thresholding-based techniques, region growing-based techniques, edge detection techniques, Artificial Neural Network (ANN) based segmentation methods, non-deep learning approaches and deep learning approaches. The paper also suggests future research directions for improving current methodologies.
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Affiliation(s)
- Satish S
- Department of Electronics and Communication Engineering, Vel Tech Rangarajan Dr Sagunthala R&D Institute of Science and Technology, Chennai-600062, Tamil Nadu, India
| | - N Herald Anantha Rufus
- Department of Electronics and Communication Engineering, Vel Tech Rangarajan Dr Sagunthala R&D Institute of Science and Technology, Chennai-600062, Tamil Nadu, India
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Mei K, Hu B, Fei B, Qin B. Phase asymmetry ultrasound despeckling with fractional anisotropic diffusion and total variation. IEEE TRANSACTIONS ON IMAGE PROCESSING : A PUBLICATION OF THE IEEE SIGNAL PROCESSING SOCIETY 2019; 29:10.1109/TIP.2019.2953361. [PMID: 31751240 PMCID: PMC7370834 DOI: 10.1109/tip.2019.2953361] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
We propose an ultrasound speckle filtering method for not only preserving various edge features but also filtering tissue-dependent complex speckle noises in ultrasound images. The key idea is to detect these various edges using a phase congruence-based edge significance measure called phase asymmetry (PAS), which is invariant to the intensity amplitude of edges and takes 0 in non-edge smooth regions and 1 at the idea step edge, while also taking intermediate values at slowly varying ramp edges. By leveraging the PAS metric in designing weighting coefficients to maintain a balance between fractional-order anisotropic diffusion and total variation (TV) filters in TV cost function, we propose a new fractional TV framework to not only achieve the best despeckling performance with ramp edge preservation but also reduce the staircase effect produced by integral-order filters. Then, we exploit the PAS metric in designing a new fractional-order diffusion coefficient to properly preserve low-contrast edges in diffusion filtering. Finally, different from fixed fractional-order diffusion filters, an adaptive fractional order is introduced based on the PAS metric to enhance various weak edges in the spatially transitional areas between objects. The proposed fractional TV model is minimized using the gradient descent method to obtain the final denoised image. The experimental results and real application of ultrasound breast image segmentation show that the proposed method outperforms other state-of-the-art ultrasound despeckling filters for both speckle reduction and feature preservation in terms of visual evaluation and quantitative indices. The best scores on feature similarity indices have achieved 0.867, 0.844 and 0.834 under three different levels of noise, while the best breast ultrasound segmentation accuracy in terms of the mean and median dice similarity coefficient are 96.25% and 96.15%, respectively.
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Affiliation(s)
- Kunqiang Mei
- School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Bin Hu
- Department of Ultrasound in Medicine, Shanghai Jiao Tong University Affiliated Sixth People’s Hospital, Shanghai Institute of Ultrasound in Medicine, Shanghai 200233, China
| | - Baowei Fei
- Department of Bioengineering, Erik Jonsson School of Engineering and Computer Science, The University of Texas at Dallas, Richardson, TX 75080 USA
| | - Binjie Qin
- School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
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Zhu L, Wang W, Li X, Wang Q, Qin J, Wong KH, Choi KS, Fu CW, Heng PA. Feature-preserving ultrasound speckle reduction via L 0 minimization. Neurocomputing 2018. [DOI: 10.1016/j.neucom.2018.03.009] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Liu L, Li K, Qin W, Wen T, Li L, Wu J, Gu J. Automated breast tumor detection and segmentation with a novel computational framework of whole ultrasound images. Med Biol Eng Comput 2018; 56:183-199. [PMID: 29292471 DOI: 10.1007/s11517-017-1770-3] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2017] [Accepted: 12/13/2017] [Indexed: 01/12/2023]
Abstract
Due to the low contrast and ambiguous boundaries of the tumors in breast ultrasound (BUS) images, it is still a challenging task to automatically segment the breast tumors from the ultrasound. In this paper, we proposed a novel computational framework that can detect and segment breast lesions fully automatic in the whole ultrasound images. This framework includes several key components: pre-processing, contour initialization, and tumor segmentation. In the pre-processing step, we applied non-local low-rank (NLLR) filter to reduce the speckle noise. In contour initialization step, we cascaded a two-step Otsu-based adaptive thresholding (OBAT) algorithm with morphologic operations to effectively locate the tumor regions and initialize the tumor contours. Finally, given the initial tumor contours, the improved Chan-Vese model based on the ratio of exponentially weighted averages (CV-ROEWA) method was utilized. This pipeline was tested on a set of 61 breast ultrasound (BUS) images with diagnosed tumors. The experimental results in clinical ultrasound images prove the high accuracy and robustness of the proposed framework, indicating its potential applications in clinical practice. Graphical abstract ᅟ.
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Affiliation(s)
- Lei Liu
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, People's Republic of China
| | - Kai Li
- Department of Medical Ultrasonics, The Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510630, People's Republic of China
| | - Wenjian Qin
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, People's Republic of China.,University of Chinese Academy of Sciences, Beijing, 100049, People's Republic of China
| | - Tiexiang Wen
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, People's Republic of China
| | - Ling Li
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, People's Republic of China
| | - Jia Wu
- Department of Radiation Oncology, Stanford University, Stanford, CA, 94305, USA.
| | - Jia Gu
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, People's Republic of China.
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Flores WG, Pereira WCDA. A contrast enhancement method for improving the segmentation of breast lesions on ultrasonography. Comput Biol Med 2017; 80:14-23. [PMID: 27875741 DOI: 10.1016/j.compbiomed.2016.11.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2016] [Revised: 11/10/2016] [Accepted: 11/12/2016] [Indexed: 10/20/2022]
Abstract
PURPOSE This paper presents an adaptive contrast enhancement method based on sigmoidal mapping function (SACE) used for improving the computerized segmentation of breast lesions on ultrasound. METHODS First, from the original ultrasound image an intensity variation map is obtained, which is used to generate local sigmoidal mapping functions related to distinct contextual regions. Then, a bilinear interpolation scheme is used to transform every original pixel to a new gray level value. Also, four contrast enhancement techniques widely used in breast ultrasound enhancement are implemented: histogram equalization (HEQ), contrast limited adaptive histogram equalization (CLAHE), fuzzy enhancement (FEN), and sigmoid based enhancement (SEN). In addition, these contrast enhancement techniques are considered in a computerized lesion segmentation scheme based on watershed transformation. The performance comparison among techniques is assessed in terms of both the quality of contrast enhancement and the segmentation accuracy. The former is quantified by the measure, where the greater the value, the better the contrast enhancement, whereas the latter is calculated by the Jaccard index, which should tend towards unity to indicate adequate segmentation. RESULTS The experiments consider a data set with 500 breast ultrasound images. The results show that SACE outperforms its counterparts, where the median values for the measure are: SACE: 139.4, SEN: 68.2, HEQ: 64.1, CLAHE: 62.8, and FEN: 7.9. Considering the segmentation performance results, the SACE method presents the largest accuracy, where the median values for the Jaccard index are: SACE: 0.81, FEN: 0.80, CLAHE: 0.79, HEQ: 77, and SEN: 0.63. CONCLUSION The SACE method performs well due to the combination of three elements: (1) the intensity variation map reduces intensity variations that could distort the real response of the mapping function, (2) the sigmoidal mapping function enhances the gray level range where the transition between lesion and background is found, and (3) the adaptive enhancing scheme for coping with local contrasts. Hence, the SACE approach is appropriate for enhancing contrast before computerized lesion segmentation.
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Affiliation(s)
- Wilfrido Gómez Flores
- Technology Information Laboratory, Center for Research and Advanced Studies of the National Polytechnic Institute, Ciudad Victoria 87130, Tamaulipas, Mexico.
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Systematic Evaluation on Speckle Suppression Methods in Examination of Ultrasound Breast Images. APPLIED SCIENCES-BASEL 2016. [DOI: 10.3390/app7010037] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Gómez-Flores W, Ruiz-Ortega BA. New Fully Automated Method for Segmentation of Breast Lesions on Ultrasound Based on Texture Analysis. ULTRASOUND IN MEDICINE & BIOLOGY 2016; 42:1637-1650. [PMID: 27095150 DOI: 10.1016/j.ultrasmedbio.2016.02.016] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2015] [Revised: 02/08/2016] [Accepted: 02/21/2016] [Indexed: 06/05/2023]
Abstract
The study described here explored a fully automatic segmentation approach based on texture analysis for breast lesions on ultrasound images. The proposed method involves two main stages: (i) In lesion region detection, the original gray-scale image is transformed into a texture domain based on log-Gabor filters. Local texture patterns are then extracted from overlapping lattices that are further classified by a linear discriminant analysis classifier to distinguish between the "normal tissue" and "breast lesion" classes. Next, an incremental method based on the average radial derivative function reveals the region with the highest probability of being a lesion. (ii) In lesion delineation, using the detected region and the pre-processed ultrasound image, an iterative thresholding procedure based on the average radial derivative function is performed to determine the final lesion contour. The experiments are carried out on a data set of 544 breast ultrasound images (including cysts, benign solid masses and malignant lesions) acquired with three distinct ultrasound machines. In terms of the area under the receiver operating characteristic curve, the one-way analysis of variance test (α=0.05) indicates that the proposed approach significantly outperforms two published fully automatic methods (p<0.001), for which the areas under the curve are 0.91, 0.82 and 0.63, respectively. Hence, these results suggest that the log-Gabor domain improves the discrimination power of texture features to accurately segment breast lesions. In addition, the proposed approach can potentially be used for automated computer diagnosis purposes to assist physicians in detection and classification of breast masses.
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Affiliation(s)
- Wilfrido Gómez-Flores
- Technology Information Laboratory, Center for Research and Advanced Studies of the National Polytechnic Institute, Ciudad Victoria, Tamaulipas, Mexico.
| | - Bedert Abel Ruiz-Ortega
- Technology Information Laboratory, Center for Research and Advanced Studies of the National Polytechnic Institute, Ciudad Victoria, Tamaulipas, Mexico
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Gómez Flores W, Pereira WCDA, Infantosi AFC. Breast ultrasound despeckling using anisotropic diffusion guided by texture descriptors. ULTRASOUND IN MEDICINE & BIOLOGY 2014; 40:2609-2621. [PMID: 25218452 DOI: 10.1016/j.ultrasmedbio.2014.06.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2013] [Revised: 05/22/2014] [Accepted: 06/04/2014] [Indexed: 06/03/2023]
Abstract
Breast ultrasound (BUS) is considered the most important adjunct method to mammography for diagnosing cancer. However, this image modality suffers from an intrinsic artifact called speckle noise, which degrades spatial and contrast resolution and obscures the screened anatomy. Hence, it is necessary to reduce speckle artifacts before performing image analysis by means of computer-aided diagnosis systems, for example. In addition, the trade-off between smoothing level and preservation of lesion contour details should be addressed by speckle reduction schemes. In this scenario, we propose a BUS despeckling method based on anisotropic diffusion guided by Log-Gabor filters (ADLG). Because we assume that different breast tissues have distinct textures, in our approach we perform a multichannel decomposition of the BUS image using Log-Gabor filters. Next, the conduction coefficient of anisotropic diffusion filtering is computed using texture responses instead of intensity values as stated originally. The proposed algorithm is validated using both synthetic and real breast data sets, with 900 and 50 images, respectively. The performance measures are compared with four existing speckle reduction schemes based on anisotropic diffusion: conventional anisotropic diffusion filtering (CADF), speckle-reducing anisotropic diffusion (SRAD), texture-oriented anisotropic diffusion (TOAD), and interference-based speckle filtering followed by anisotropic diffusion (ISFAD). The validity metrics are the Pratt's figure of merit, for synthetic images, and the mean radial distance (in pixels), for real sonographies. Figure of merit and mean radial distance indices should tend toward '1' and '0', respectively, to indicate adequate edge preservation. The results suggest that ADLG outperforms the four speckle removal filters compared with respect to simulated and real BUS images. For each method--ADLG, CADF, SRAD, TOAD and ISFAD--the figure of merit median values are 0.83, 0.40, 0.39, 0.51 and 0.59, and the mean radial distance median results are 4.19, 6.29, 6.39, 6.43 and 5.88.
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Affiliation(s)
- Wilfrido Gómez Flores
- Technology Information Laboratory, Center for Research and Advanced Studies of the National Polytechnic Institute, Ciudad Victoria, Tamaulipas, Mexico.
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Ovireddy S, Muthusamy E. Speckle suppressing anisotropic diffusion filter for medical ultrasound images. ULTRASONIC IMAGING 2014; 36:112-132. [PMID: 24554292 DOI: 10.1177/0161734613512200] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Ultrasonography is often preferred over the other medical imaging modalities due to its noninvasive nature, cost-effectiveness, and portability. However, the resolution of the ultrasound image greatly depends upon the presence of speckle noise. Speckle noise generally tends to reduce the image resolution and contrast, thereby reducing the diagnostic resolution of this imaging modality. In this paper, we propose a speckle suppressing anisotropic diffusion (SSAD) filter, to remove the speckle noise from B-Mode Ultrasound images. The performance of the SSAD filter is compared with the existing diffusion filters. The evaluation is based on their application to images simulated by Field II (developed by Jensen et al.). The algorithms were also tested for clinical ultrasound images of polycystic ovaries obtained from HDI 5000 Ultrasound Scanner. Performance evaluation was done by both numerical and functional parameters. The proposed filter yields better results in terms of greatest structural similarity index map (SSIM) of 0.95 and accuracy of 99.5.
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Affiliation(s)
- Saraniya Ovireddy
- 1Department of Electronics and Communication Engineering, Government College of Technology, Coimbatore, India
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