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For: Fu S, Yang Q, Sheng Y, Wang Q, Wu J, Qiu Z, Lan R, Wang Y, Liu Y. Metagenomics combined with comprehensive validation as a public health risk assessment tool for urban and agricultural run-off. Water Res 2022;209:117941. [PMID: 34920315 DOI: 10.1016/j.watres.2021.117941] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Revised: 11/13/2021] [Accepted: 12/04/2021] [Indexed: 06/14/2023]
Number Cited by Other Article(s)
1
Zhang Z, Li Q, He F, Wang Z, Zhu C, Tu J, Li H, Yi L, Deng Y, Fu S. Sewage surveillance revealed the seasonality and prevalence of respiratory syncytial virus and its implications for seasonal immunization strategy in low and middle-income regions of China. WATER RESEARCH 2025;270:122828. [PMID: 39608158 DOI: 10.1016/j.watres.2024.122828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Revised: 10/28/2024] [Accepted: 11/19/2024] [Indexed: 11/30/2024]
2
Cheshomi N, Alum A, Smith MF, Lim ES, Conroy-Ben O, Abbaszadegan M. Viral concentration method biases in the detection of viral profiles in wastewater. Appl Environ Microbiol 2025;91:e0133924. [PMID: 39641602 PMCID: PMC11784009 DOI: 10.1128/aem.01339-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2024] [Accepted: 10/31/2024] [Indexed: 12/07/2024]  Open
3
Poghosyan A, Hakobyan S, Avagyan H, Avetisyan A, Bayramyan N, Hakobyan L, Abroyan L, Davtyan A, Poghosyan D, Baghdasaryan B, Arakelova E, Karalova E, Karalyan Z. The role of gastropods in African swine fever virus ecology. Virol J 2024;21:180. [PMID: 39113041 PMCID: PMC11308590 DOI: 10.1186/s12985-024-02444-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2024] [Accepted: 07/23/2024] [Indexed: 08/10/2024]  Open
4
Zeng H, Wang Y, Zhao Z, Zhu D, Xia H, Wei Y, Kuang P, An D, Chen K, Li R, Lei Y, Sun G. Travertine deposition rather than tourism activity is the primary contributor to the microplastic risks in alpine karst lakes. JOURNAL OF HAZARDOUS MATERIALS 2024;476:135192. [PMID: 39002479 DOI: 10.1016/j.jhazmat.2024.135192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2024] [Revised: 07/08/2024] [Accepted: 07/11/2024] [Indexed: 07/15/2024]
5
Spatz S, Afonso CL. Non-Targeted RNA Sequencing: Towards the Development of Universal Clinical Diagnosis Methods for Human and Veterinary Infectious Diseases. Vet Sci 2024;11:239. [PMID: 38921986 PMCID: PMC11209166 DOI: 10.3390/vetsci11060239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Revised: 05/22/2024] [Accepted: 05/23/2024] [Indexed: 06/27/2024]  Open
6
Xiao R, Hu Y, Wang Y, Li J, Guo C, Bai J, Zhang L, Zhang K, Jorquera MA, Acuña JJ, Pan W. Pathogen profile of Baiyangdian Lake sediments using metagenomic analysis and their correlation with environmental factors. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;913:169628. [PMID: 38159771 DOI: 10.1016/j.scitotenv.2023.169628] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 12/20/2023] [Accepted: 12/21/2023] [Indexed: 01/03/2024]
7
Shen L, Zhang Z, Wang R, Wu S, Wang Y, Fu S. Metatranscriptomic data mining together with microfluidic card uncovered the potential pathogens and seasonal RNA viral ecology in a drinking water source. J Appl Microbiol 2024;135:lxad310. [PMID: 38130237 DOI: 10.1093/jambio/lxad310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 10/26/2023] [Accepted: 12/20/2023] [Indexed: 12/23/2023]
8
Sokoloski KJ, Holm RH, Smith M, Ford EE, Rouchka EC, Smith T. What is the functional reach of wastewater surveillance for respiratory viruses, pathogenic viruses of concern, and bacterial antibiotic resistance genes of interest? Hum Genomics 2023;17:114. [PMID: 38105239 PMCID: PMC10726489 DOI: 10.1186/s40246-023-00563-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 12/04/2023] [Indexed: 12/19/2023]  Open
9
Afonso CL, Afonso AM. Next-Generation Sequencing for the Detection of Microbial Agents in Avian Clinical Samples. Vet Sci 2023;10:690. [PMID: 38133241 PMCID: PMC10747646 DOI: 10.3390/vetsci10120690] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 11/24/2023] [Accepted: 11/29/2023] [Indexed: 12/23/2023]  Open
10
Zhang M, Liu J, Hu N, Fang Q, Zhang D, Qiang Z, Pan X. Cascade capture, oxidization and inactivation for removing multi-species pollutants, antimicrobial resistance and pathogenicity from hospital wastewater. JOURNAL OF HAZARDOUS MATERIALS 2023;457:131730. [PMID: 37269564 DOI: 10.1016/j.jhazmat.2023.131730] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 04/29/2023] [Accepted: 05/27/2023] [Indexed: 06/05/2023]
11
Schaeffer J, Desdouits M, Besnard A, Le Guyader FS. Looking into sewage: how far can metagenomics help to detect human enteric viruses? Front Microbiol 2023;14:1161674. [PMID: 37180249 PMCID: PMC10166864 DOI: 10.3389/fmicb.2023.1161674] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 04/03/2023] [Indexed: 05/16/2023]  Open
12
Fu S, Wang R, Xu Z, Zhou H, Qiu Z, Shen L, Yang Q. Metagenomic sequencing combined with flow cytometry facilitated a novel microbial risk assessment framework for bacterial pathogens in municipal wastewater without cultivation. IMETA 2023;2:e77. [PMID: 38868349 PMCID: PMC10989823 DOI: 10.1002/imt2.77] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Revised: 12/05/2022] [Accepted: 12/07/2022] [Indexed: 06/14/2024]
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