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Kim Y, Alia A, Kurle-Tucholski P, Wiebeler C, Matysik J. Electronic Structures of Radical-Pair-Forming Cofactors in a Heliobacterial Reaction Center. Molecules 2024; 29:1021. [PMID: 38474533 DOI: 10.3390/molecules29051021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 02/16/2024] [Accepted: 02/22/2024] [Indexed: 03/14/2024] Open
Abstract
Photosynthetic reaction centers (RCs) are membrane proteins converting photonic excitations into electric gradients. The heliobacterial RCs (HbRCs) are assumed to be the precursors of all known RCs, making them a compelling subject for investigating structural and functional relationships. A comprehensive picture of the electronic structure of the HbRCs is still missing. In this work, the combination of selective isotope labelling of 13C and 15N nuclei and the utilization of photo-CIDNP MAS NMR (photochemically induced dynamic nuclear polarization magic-angle spinning nuclear magnetic resonance) allows for highly enhanced signals from the radical-pair-forming cofactors. The remarkable magnetic-field dependence of the solid-state photo-CIDNP effect allows for observation of positive signals of the electron donor cofactor at 4.7 T, which is interpreted in terms of a dominant contribution of the differential relaxation (DR) mechanism. Conversely, at 9.4 T, the emissive signals mainly originate from the electron acceptor, due to the strong activation of the three-spin mixing (TSM) mechanism. Consequently, we have utilized two-dimensional homonuclear photo-CIDNP MAS NMR at both 4.7 T and 9.4 T. These findings from experimental investigations are corroborated by calculations based on density functional theory (DFT). This allows us to present a comprehensive investigation of the electronic structure of the cofactors involved in electron transfer (ET).
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Affiliation(s)
- Yunmi Kim
- Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, D-04103 Leipzig, Germany
| | - A Alia
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2301 RA Leiden, The Netherlands
- Institut für Medizinische Physik und Biophysik, Universität Leipzig, Härtelstr. 16-18, D-04107 Leipzig, Germany
| | - Patrick Kurle-Tucholski
- Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, D-04103 Leipzig, Germany
| | - Christian Wiebeler
- Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, D-04103 Leipzig, Germany
- Institut für Physik, Universität Augsburg, Universitätsstraße 1, D-86159 Augsburg, Germany
| | - Jörg Matysik
- Institut für Analytische Chemie, Universität Leipzig, Linnéstraße 3, D-04103 Leipzig, Germany
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2
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Mathis P, Sage E, Byrdin M. Pushing the limits of flash photolysis to unravel the secrets of biological electron and proton transfer. Photochem Photobiol Sci 2022; 21:1533-1544. [DOI: 10.1007/s43630-021-00134-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/05/2021] [Indexed: 11/25/2022]
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3
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Agostini A, Bortolus M, Ferlez B, Walters K, Golbeck JH, van der Est A, Carbonera D. Differential sensitivity to oxygen among the bacteriochlorophylls g in the type-I reaction centers of Heliobacterium modesticaldum. Photochem Photobiol Sci 2021; 20:747-759. [PMID: 34018156 DOI: 10.1007/s43630-021-00049-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Accepted: 04/28/2021] [Indexed: 11/27/2022]
Abstract
The type-I, homodimeric photosynthetic reaction center (RC) of Heliobacteria (HbRC) is the only known RC in which bacteriochlorophyll g (BChl g) is found. It is also simpler than other RCs, having the smallest number of protein subunits and bound chromophores of any type-I RC. In the presence of oxygen, BChl g isomerizes to 81-hydroxychlorophyll aF (Chl aF). This naturally occurring process provides a way of altering the chlorophylls and studying the effect of these changes on energy and electron transfer. Transient absorbance difference spectroscopy reveals that triplet-state formation occurs in the antenna chlorophylls of HbRCs but does not provide site-specific information. Here, we report on an extended optically detected magnetic resonance (ODMR) study of the antenna triplet states in HbRCs with differing levels of conversion of BChl g to Chl aF. The data reveal pools of BChl g molecules with different triplet zero-field splitting parameters and different susceptibilities to chemical oxidation. By relating the detailed spectroscopic characteristics derived from the ODMR data to the recently solved crystallographic structure, we have tentatively identified BChl g molecules in which the probability of triplet formation is high and sites at which BChl g conversion is more likely, providing useful information about the fate of the excitation in the complex.
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Affiliation(s)
- Alessandro Agostini
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padua, Italy.,Biology Centre, Czech Academy of Sciences, Institute of Plant Molecular Biology, Branisovska 31, 37005, České Budějovice, Czechia
| | - Marco Bortolus
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padua, Italy
| | - Bryan Ferlez
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA.,Department of Biochemistry and Molecular Biology and MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, USA
| | - Karim Walters
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA
| | - John H Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA
| | - Art van der Est
- Department of Chemistry, Brock University, 1812 Sir Isaac Brock, Way, Saint Catharines, ON, L2S 3A1, Canada.
| | - Donatella Carbonera
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padua, Italy.
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Orf GS, Gisriel C, Redding KE. Evolution of photosynthetic reaction centers: insights from the structure of the heliobacterial reaction center. PHOTOSYNTHESIS RESEARCH 2018; 138:11-37. [PMID: 29603081 DOI: 10.1007/s11120-018-0503-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2018] [Accepted: 03/22/2018] [Indexed: 05/24/2023]
Abstract
The proliferation of phototrophy within early-branching prokaryotes represented a significant step forward in metabolic evolution. All available evidence supports the hypothesis that the photosynthetic reaction center (RC)-the pigment-protein complex in which electromagnetic energy (i.e., photons of visible or near-infrared light) is converted to chemical energy usable by an organism-arose once in Earth's history. This event took place over 3 billion years ago and the basic architecture of the RC has diversified into the distinct versions that now exist. Using our recent 2.2-Å X-ray crystal structure of the homodimeric photosynthetic RC from heliobacteria, we have performed a robust comparison of all known RC types with available structural data. These comparisons have allowed us to generate hypotheses about structural and functional aspects of the common ancestors of extant RCs and to expand upon existing evolutionary schemes. Since the heliobacterial RC is homodimeric and loosely binds (and reduces) quinones, we support the view that it retains more ancestral features than its homologs from other groups. In the evolutionary scenario we propose, the ancestral RC predating the division between Type I and Type II RCs was homodimeric, loosely bound two mobile quinones, and performed an inefficient disproportionation reaction to reduce quinone to quinol. The changes leading to the diversification into Type I and Type II RCs were separate responses to the need to optimize this reaction: the Type I lineage added a [4Fe-4S] cluster to facilitate double reduction of a quinone, while the Type II lineage heterodimerized and specialized the two cofactor branches, fixing the quinone in the QA site. After the Type I/II split, an ancestor to photosystem I fixed its quinone sites and then heterodimerized to bind PsaC as a new subunit, as responses to rising O2 after the appearance of the oxygen-evolving complex in an ancestor of photosystem II. These pivotal events thus gave rise to the diversity that we observe today.
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Affiliation(s)
- Gregory S Orf
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
- Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, AZ, 85287, USA
| | - Christopher Gisriel
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA
- Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, AZ, 85287, USA
- The Biodesign Center for Applied Structural Discovery, Arizona State University, Tempe, AZ, 85287, USA
| | - Kevin E Redding
- School of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA.
- Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, AZ, 85287, USA.
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5
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Kondo T, Matsuoka M, Azai C, Kobayashi M, Itoh S, Oh-oka H. Light-Induced Electron Spin-Polarized (ESP) EPR Signal of the P800+ Menaquinone– Radical Pair State in Oriented Membranes of Heliobacterium modesticaldum: Role/Location of Menaquinone in the Homodimeric Type I Reaction Center. J Phys Chem B 2018; 122:2536-2543. [DOI: 10.1021/acs.jpcb.7b12171] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Toru Kondo
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan
| | - Masahiro Matsuoka
- Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
| | - Chihiro Azai
- Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
| | - Masami Kobayashi
- Division of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Shigeru Itoh
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan
| | - Hirozo Oh-oka
- Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
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Ferlez B, Cowgill J, Dong W, Gisriel C, Lin S, Flores M, Walters K, Cetnar D, Redding KE, Golbeck JH. Thermodynamics of the Electron Acceptors in Heliobacterium modesticaldum: An Exemplar of an Early Homodimeric Type I Photosynthetic Reaction Center. Biochemistry 2016; 55:2358-70. [PMID: 27033441 DOI: 10.1021/acs.biochem.5b01320] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The homodimeric type I reaction center in heliobacteria is arguably the simplest known pigment-protein complex capable of conducting (bacterio)chlorophyll-based conversion of light into chemical energy. Despite its structural simplicity, the thermodynamics of the electron transfer cofactors on the acceptor side have not been fully investigated. In this work, we measured the midpoint potential of the terminal [4Fe-4S](2+/1+) cluster (FX) in reaction centers from Heliobacterium modesticaldum. The FX cluster was titrated chemically and monitored by (i) the decrease in the level of stable P800 photobleaching by optical spectroscopy, (ii) the loss of the light-induced g ≈ 2 radical from P800(+•) following a single-turnover flash, (iii) the increase in the low-field resonance at 140 mT attributed to the S = (3)/2 ground spin state of FX(-), and (iv) the loss of the spin-correlated P800(+) FX(-) radical pair following a single-turnover flash. These four techniques led to similar estimations of the midpoint potential for FX of -502 ± 3 mV (n = 0.99), -496 ± 2 mV (n = 0.99), -517 ± 10 mV (n = 0.65), and -501 ± 4 mV (n = 0.84), respectively, with a consensus value of -504 ± 10 mV (converging to n = 1). Under conditions in which FX is reduced, the long-lived (∼15 ms) P800(+) FX(-) state is replaced by a rapidly recombining (∼15 ns) P800(+)A0(-) state, as shown by ultrafast optical experiments. There was no evidence of the presence of a P800(+) A1(-) spin-correlated radical pair by electron paramagnetic resonance (EPR) under these conditions. The midpoint potentials of the two [4Fe-4S](2+/1+) clusters in the low-molecular mass ferredoxins were found to be -480 ± 11 mV/-524 ± 13 mV for PshBI, -453 ± 6 mV/-527 ± 6 mV for PshBII, and -452 ± 5 mV/-533 ± 8 mV for HM1_2505 as determined by EPR spectroscopy. FX is therefore suitably poised to reduce one [4Fe-4S](2+/1+) cluster in these mobile electron carriers. Using the measured midpoint potential of FX and a quasi-equilibrium model of charge recombination, the midpoint potential of A0 was estimated to be -854 mV at room temperature. The midpoint potentials of A0 and FX are therefore 150-200 mV less reducing than their respective counterparts in Photosystem I of cyanobacteria and plants. This places the redox potential of the FX cluster in heliobacteria approximately equipotential to the highest-potential iron-sulfur cluster (FA) in Photosystem I, consistent with its assignment as the terminal electron acceptor.
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Affiliation(s)
- Bryan Ferlez
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - John Cowgill
- School of Molecular Sciences, Arizona State University , Tempe, Arizona 85287, United States
| | - Weibing Dong
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Christopher Gisriel
- School of Molecular Sciences, Arizona State University , Tempe, Arizona 85287, United States
| | - Su Lin
- School of Molecular Sciences, Arizona State University , Tempe, Arizona 85287, United States
| | - Marco Flores
- School of Molecular Sciences, Arizona State University , Tempe, Arizona 85287, United States
| | - Karim Walters
- Department of Chemistry, The Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Daniel Cetnar
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University , University Park, Pennsylvania 16802, United States
| | - Kevin E Redding
- School of Molecular Sciences, Arizona State University , Tempe, Arizona 85287, United States
| | - John H Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University , University Park, Pennsylvania 16802, United States.,Department of Chemistry, The Pennsylvania State University , University Park, Pennsylvania 16802, United States
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7
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Ferlez B, Dong W, Siavashi R, Redding K, Hou HJM, Golbeck JH, van der Est A. The Effect of Bacteriochlorophyll g Oxidation on Energy and Electron Transfer in Reaction Centers from Heliobacterium modesticaldum. J Phys Chem B 2015; 119:13714-25. [PMID: 26030062 DOI: 10.1021/acs.jpcb.5b03339] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The heliobacteria are a family of strictly anaerobic, Gram-positive, photoheterotrophs in the Firmicutes. They make use of a homodimeric type I reaction center (RC) that contains ∼20 antenna bacteriochlorophyll (BChl) g molecules, a special pair of BChl g' molecules (P800), two 8(1)-OH-Chl aF molecules (A0), a [4Fe-4S] iron-sulfur cluster (FX), and a carotenoid (4,4'-diaponeurosporene). It is known that in the presence of light and oxygen BChl g is converted to a species with an absorption spectrum identical to that of Chl a. Here, we show that main product of the conversion is 8(1)-OH-Chl aF. Smaller amounts of two other oxidized Chl aF species are also produced. In the presence of light and oxygen, the kinetics of the conversion are monophasic and temperature dependent, with an activation energy of 66 ± 2 kJ mol(-1). In the presence of oxygen in the dark, the conversion occurs in two temperature-dependent kinetic phases: a slow phase followed by a fast phase with an activation energy of 53 ± 1 kJ mol(-1). The loss of BChl g' occurs at the same rate as the loss of Bchl g; hence, the special pair converts at the same rate as the antenna Chl's. However, the loss of P800 photooxidiation and flavodoxin reduction is not linear with the loss of BChl g. In anaerobic RCs, the charge recombination between P800(+) and FX(-) at 80 K is monophasic with a lifetime of 4.2 ms, but after exposure to oxygen, an additional phase with a lifetime of 0.3 ms is observed. Transient EPR data show that the line width of P800(+) increases as BChl g is converted to Chl aF and the rate of electron transfer from A0 to FX, as estimated from the net polarization generated by singlet-triplet mixing during the lifetime of P800(+)A0(-), is unchanged. The transient EPR data also show that conversion of the BChl g results in increased formation of triplet states of both BChl g and Chl aF. The nonlinear loss of P800 photooxidiation and flavodoxin reduction, the biphasic backreaction kinetics, and the increased EPR line width of P800(+) are all consistent with a model in which the BChl g'/BChl g' and BChl g'/Chl aF' special pairs are functional but the Chl aF'/Chl aF' special pair is not.
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Affiliation(s)
| | | | | | - Kevin Redding
- Department of Chemistry & Biochemistry, Arizona State University , Tempe, Arizona 85287, United States
| | - Harvey J M Hou
- Department of Physical Sciences, Alabama State University , Montgomery, Alabama 36104, United States
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Redding KE, Sarrou I, Rappaport F, Santabarbara S, Lin S, Reifschneider KT. Modulation of the fluorescence yield in heliobacterial cells by induction of charge recombination in the photosynthetic reaction center. PHOTOSYNTHESIS RESEARCH 2014; 120:221-235. [PMID: 24318506 DOI: 10.1007/s11120-013-9957-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2013] [Accepted: 11/25/2013] [Indexed: 06/02/2023]
Abstract
Heliobacteria contain a very simple photosynthetic apparatus, consisting of a homodimeric type I reaction center (RC) without a peripheral antenna system and using the unique pigment bacteriochlorophyll (BChl) g. They are thought to use a light-driven cyclic electron transport pathway to pump protons, and thereby phosphorylate ADP, although some of the details of this cycle are yet to be worked out. We previously reported that the fluorescence emission from the heliobacterial RC in vivo was increased by exposure to actinic light, although this variable fluorescence phenomenon exhibited very different characteristics to that in oxygenic phototrophs (Collins et al. 2010). Here, we describe the underlying mechanism behind the variable fluorescence in heliobacterial cells. We find that the ability to stably photobleach P800, the primary donor of the RC, using brief flashes is inversely correlated to the variable fluorescence. Using pump-probe spectroscopy in the nanosecond timescale, we found that illumination of cells with bright light for a few seconds put them in a state in which a significant fraction of the RCs underwent charge recombination from P800 (+)A0 (-) with a time constant of ~20 ns. The fraction of RCs in the rapidly back-reacting state correlated very well with the variable fluorescence, indicating that nearly all of the increase in fluorescence could be explained by charge recombination of P800 (+)A0 (-), some of which regenerated the singlet excited state. This hypothesis was tested directly by time-resolved fluorescence studies in the ps and ns timescales. The major decay component in whole cells had a 20-ps decay time, representing trapping by the RC. Treatment of cells with dithionite resulted in the appearance of a ~18-ns decay component, which accounted for ~0.6 % of the decay, but was almost undetectable in the untreated cells. We conclude that strong illumination of heliobacterial cells can result in saturation of the electron acceptor pool, leading to reduction of the acceptor side of the RC and the creation of a back-reacting RC state that gives rise to delayed fluorescence.
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Affiliation(s)
- Kevin E Redding
- Department of Chemistry and Biochemistry, Arizona State University, 1711 S. Rural Rd., Tempe, AZ, 85287-1604, USA,
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9
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Energy Conservation in Heliobacteria: Photosynthesis and Central Carbon Metabolism. THE STRUCTURAL BASIS OF BIOLOGICAL ENERGY GENERATION 2014. [DOI: 10.1007/978-94-017-8742-0_13] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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10
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Chauvet A, Sarrou J, Lin S, Romberger SP, Golbeck JH, Savikhin S, Redding KE. Temporal and spectral characterization of the photosynthetic reaction center from Heliobacterium modesticaldum. PHOTOSYNTHESIS RESEARCH 2013; 116:1-9. [PMID: 23812833 DOI: 10.1007/s11120-013-9871-9] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2012] [Accepted: 06/11/2013] [Indexed: 06/02/2023]
Abstract
A time-resolved spectroscopic study of the isolated photosynthetic reaction center (RC) from Heliobacterium modesticaldum reveals that thermal equilibration of light excitation among the antenna pigments followed by trapping of excitation and the formation of the charge-separated state P800 (+)A0 (-) occurs within ~25 ps. This time scale is similar to that reported for plant and cyanobacterial photosystem I (PS I) complexes. Subsequent electron transfer from the primary electron acceptor A0 occurs with a lifetime of ~600 ps, suggesting that the RC of H. modesticaldum is functionally similar to that of Heliobacillus mobilis and Heliobacterium chlorum. The (A0 (-) - A0) and (P800 (+) - P800) absorption difference spectra imply that an 8(1)-OH-Chl a F molecule serves as the primary electron acceptor and occupies the position analogous to ec3 (A0) in PS I, while a monomeric BChl g pigment occupies the position analogous to ec2 (accessory Chl). The presence of an intense photobleaching band at 790 nm in the (A0 (-) - A0) spectrum suggests that the excitonic coupling between the monomeric accessory BChl g and the 8(1)-OH-Chl a F in the heliobacterial RC is significantly stronger than the excitonic coupling between the equivalent pigments in PS I.
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Affiliation(s)
- Adrien Chauvet
- Department of Physics, Purdue University, 525 Northwestern Ave, West Lafayette, IN 47907, USA
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11
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Sarrou I, Khan Z, Cowgill J, Lin S, Brune D, Romberger S, Golbeck JH, Redding KE. Purification of the photosynthetic reaction center from Heliobacterium modesticaldum. PHOTOSYNTHESIS RESEARCH 2012; 111:291-302. [PMID: 22383054 DOI: 10.1007/s11120-012-9726-9] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2011] [Accepted: 02/06/2012] [Indexed: 05/31/2023]
Abstract
We have developed a purification protocol for photoactive reaction centers (HbRC) from Heliobacterium modesticaldum. HbRCs were purified from solubilized membranes in two sequential chromatographic steps, resulting in the isolation of a fraction containing a single polypeptide, which was identified as PshA by LC-MS/MS of tryptic peptides. All polypeptides reported earlier as unknown proteins (in Heinnickel et al., Biochemistry 45:6756-6764, 2006; Romberger et al., Photosynth Res 104:293-303, 2010) are now identified by mass spectrometry to be the membrane-bound cytochrome c (553) and four different ABC-type transporters. The purified PshA homodimer binds the following pigments: 20 bacteriochlorophyll (BChl) g, two BChl g', two 8(1)-OH-Chl a (F), and one 4,4'-diaponeurosporene. It lacks the PshB polypeptide binding the F(A) and F(B) [4Fe-4S] clusters. It is active in charge separation and exhibits a trapping time of 23 ps, as judged by time-resolved fluorescence studies. The charge recombination rate of the P(800) (+)F(X)(-) state is 10-15 ms, as seen before. The purified HbRC core was able to reduce cyanobacterial flavodoxin in the light, exhibiting a K (M) of 10 μM and a k (cat) of 9.5 s(-1) under near-saturating light. There are ~1.6 menaquinones per HbRC in the purified complex. Illumination of frozen HbRC in the presence of dithionite can cause creation of a radical at g = 2.0046, but this is not a semiquinone. Furthermore, we show that high-purity HbRCs are very stable in anoxic conditions and even remain active in the presence of oxygen under low light.
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Affiliation(s)
- Iosifina Sarrou
- Department of Chemistry and Biochemistry, Arizona State University, 1711 S. Rural Rd., Tempe, AZ 85287-1604, USA
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12
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Romberger SP, Golbeck JH. The FX iron-sulfur cluster serves as the terminal bound electron acceptor in heliobacterial reaction centers. PHOTOSYNTHESIS RESEARCH 2012; 111:285-290. [PMID: 22297911 DOI: 10.1007/s11120-012-9723-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2011] [Accepted: 01/13/2012] [Indexed: 05/31/2023]
Abstract
Phototrophs of the family Heliobacteriaceae contain the simplest known Type I reaction center (RC), consisting of a homodimeric (PshA)(2) core devoid of bound cytochromes and antenna proteins. Unlike plant and cyanobacterial Photosystem I in which the F(A)/F(B) protein, PsaC, is tightly bound to P(700)-F(X) cores, the RCs of Heliobacterium modesticaldum contain two F(A)/F(B) proteins, PshBI and PshBII, which are loosely bound to P(800)-F(X) cores. These two 2[4Fe-4S] ferredoxins have been proposed to function as mobile redox proteins, reducing downstream metabolic partners much in the same manner as does [2Fe-2S] ferredoxin or flavodoxin (Fld) in PS I. Using P(800)-F(X) cores devoid of PshBI and PshBII, we show that iron-sulfur cluster F(X) directly reduces Fld without the involvement of F(A) or F(B) (Fld is used as a proxy for soluble redox proteins even though a gene encoding Fld is not identified in the H. modesticaldum genome). The reduction of Fld is suppressed by the addition of PshBI or PshBII, an effect explained by competition for the electron on F(X). In contrast, P(700)-F(X) cores require the presence of the PsaC, and hence, the F(A)/F(B) clusters for Fld (or ferredoxin) reduction. Thus, in H. modesticaldum, the interpolypeptide F(X) cluster serves as the terminal bound electron acceptor. This finding implies that the homodimeric (PshA)(2) cores should be capable of donating electrons to a wide variety of yet-to-be characterized soluble redox partners.
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Affiliation(s)
- Steven P Romberger
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA
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13
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Collins AM, Redding KE, Blankenship RE. Modulation of fluorescence in Heliobacterium modesticaldum cells. PHOTOSYNTHESIS RESEARCH 2010; 104:283-292. [PMID: 20461555 DOI: 10.1007/s11120-010-9554-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2009] [Accepted: 04/14/2010] [Indexed: 05/29/2023]
Abstract
In what appears to be a common theme for all phototrophs, heliobacteria exhibit complex modulations of fluorescence yield when illuminated with actinic light and probed on a time scale of micros to minutes. The fluorescence yield from cells of Heliobacterium modesticaldum remained nearly constant for the first 10-100 ms of illumination and then rose to a maximum level with one or two inflections over the course of many seconds. Fluorescence then declined to a steady-state value within about one minute. In this analysis, the origins of the fluorescence induction in whole cells of heliobacteria are investigated by treating cells with a combination of electron accepters, donors, and inhibitors of the photosynthetic electron transport, as well as varying the temperature. We conclude that fluorescence modulation in H. modesticaldum results from acceptor-side limitation in the reaction center (RC), possibly due to charge recombination between P(800) (+) and A(0) (-).
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Affiliation(s)
- Aaron M Collins
- Departments of Biology and Chemistry, Washington University in St. Louis, MO 63130, USA
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14
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Romberger SP, Castro C, Sun Y, Golbeck JH. Identification and characterization of PshBII, a second FA/FB-containing polypeptide in the photosynthetic reaction center of Heliobacterium modesticaldum. PHOTOSYNTHESIS RESEARCH 2010; 104:293-303. [PMID: 20502966 DOI: 10.1007/s11120-010-9558-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2010] [Accepted: 04/29/2010] [Indexed: 05/29/2023]
Abstract
All known Type I photosynthetic reaction centers harbor three [4Fe-4S] clusters named F(X), F(A) and F(B) that function as terminal electron acceptors. We reported earlier that F(A) and F(B) in the homodimeric Type I reaction center from Heliobacterium modesticaldum reside on a loosely bound 54 amino acid protein named PshB. Time-resolved optical spectroscopy and low temperature EPR spectroscopy showed that on illumination, electrons were transferred from F(X) (-) to F(A) and F(B) at both cryogenic and room temperatures. Interestingly, the gene that codes for PshB, HM1_1462, is part of a predicted dicistronic operon that contains a second gene, named HM1_1461, which codes for a second ferredoxin-like protein with high sequence homology to PshB, including the two traditional [4Fe-4S] cluster binding motifs. RT-PCR results confirm that both genes are transcribed as a single transcript. We have cloned the HM1_1461 gene through PCR amplification of the H. modesticaldum chromosomal DNA and overexpressed the apoprotein in Escherichia coli. Reconstitution studies with inorganic reagents have shown that the holoprotein harbors ~8 iron and ~8 sulfide atoms in the form of two [4Fe-4S] clusters. Incubation of the reconstituted holoprotein with heliobacterial reaction center cores results in a charge-separated state characteristic of electron transfer past the F(X) cluster to the terminal [4Fe-4S] clusters F(A) and F(B). These results suggest that the HM1_1461 product, which we have named PshBII, is capable of functioning in lieu of PshB (renamed PshBI) as an alternative terminal electron transfer protein. Thus, unlike PS I, to which PsaC is tightly bound, two loosely bound ferredoxins, PshBI and PshBII, are capable of interacting with the heliobacterial reaction center. The presence of two, loosely bound F(A)/F(B) proteins represents a significant shift in our understanding of structure-function relationships in Type I reaction centers.
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Affiliation(s)
- Steven P Romberger
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA
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15
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Ohashi S, Iemura T, Okada N, Itoh S, Furukawa H, Okuda M, Ohnishi-Kameyama M, Ogawa T, Miyashita H, Watanabe T, Itoh S, Oh-oka H, Inoue K, Kobayashi M. An overview on chlorophylls and quinones in the photosystem I-type reaction centers. PHOTOSYNTHESIS RESEARCH 2010; 104:305-19. [PMID: 20165917 DOI: 10.1007/s11120-010-9530-3] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2009] [Accepted: 01/16/2010] [Indexed: 05/08/2023]
Abstract
Minor but key chlorophylls (Chls) and quinones in photosystem (PS) I-type reaction centers (RCs) are overviewed in regard to their molecular structures. In the PS I-type RCs, the prime-type chlorophylls, namely, bacteriochlorophyll (BChl) a' in green sulfur bacteria, BChl g' in heliobacteria, Chl a' in Chl a-type PS I, and Chl d' in Chl d-type PS I, function as the special pairs, either as homodimers, (BChl a')(2) and (BChl g')(2) in anoxygenic organisms, or heterodimers, Chl a/a' and Chl d/d' in oxygenic photosynthesis. Conversions of BChl g to Chl a and Chl a to Chl d take place spontaneously under mild condition in vitro. The primary electron acceptors, A (0), are Chl a-derivatives even in anoxygenic PS I-type RCs. The secondary electron acceptors are naphthoquinones, whereas the side chains may have been modified after the birth of cyanobacteria, leading to succession from menaquinone to phylloquinone in oxygenic PS I.
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Affiliation(s)
- Shunsuke Ohashi
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki, Japan
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16
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Ge B, Yang F, Yu D, Liu S, Xu H. Designer amphiphilic short peptides enhance thermal stability of isolated photosystem-I. PLoS One 2010; 5:e10233. [PMID: 20422003 PMCID: PMC2858086 DOI: 10.1371/journal.pone.0010233] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2009] [Accepted: 03/08/2010] [Indexed: 11/18/2022] Open
Abstract
Stability of membrane protein is crucial during protein purification and crystallization as well as in the fabrication of protein-based devices. Several recent studies have examined how various surfactants can stabilize membrane proteins out of their native membrane environment. However, there is still no single surfactant that can be universally employed for all membrane proteins. Because of the lack of knowledge on the interaction between surfactants and membrane proteins, the choice of a surfactant for a specific membrane protein remains purely empirical. Here we report that a group of short amphiphilic peptides improve the thermal stability of the multi-domain protein complex photosystem-I (PS-I) in aqueous solution and that the peptide surfactants have obvious advantages over other commonly used alkyl chain based surfactants. Of all the short peptides studied, Ac-I5K2-CONH2 (I5K2) showed the best stabilizing effect by enhancing the melting temperature of PS-I from 48.0°C to 53.0°C at concentration of 0.65 mM and extending the half life of isolated PS-I significantly. AFM experiments showed that PS-I/I5K2/Triton X-100 formed large and stable vesicles and thus provide interfacial environment mimicking that of native membranes, which may partly explain why I5K2 enhanced the thermal stability of PS-I. Hydrophobic and hydrophilic group length of IxKy had an important influence on the stabilization of PS-I. Our results showed that longer hydrophobic group was more effective in stabilizing PS-I. These simple short peptides therefore exhibit significant potential for applications in membrane protein studies.
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Affiliation(s)
- Baosheng Ge
- Center for Bioengineering and Biotechnology, China University of Petroleum, Qingdao, People's Republic of China
| | - Feng Yang
- Center for Bioengineering and Biotechnology, China University of Petroleum, Qingdao, People's Republic of China
| | - Daoyong Yu
- Center for Bioengineering and Biotechnology, China University of Petroleum, Qingdao, People's Republic of China
- * E-mail: (DY); (HX)
| | - Shuang Liu
- Center for Bioengineering and Biotechnology, China University of Petroleum, Qingdao, People's Republic of China
| | - Hai Xu
- Center for Bioengineering and Biotechnology, China University of Petroleum, Qingdao, People's Republic of China
- * E-mail: (DY); (HX)
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17
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Byrdin M, Thiagarajan V, Villette S, Espagne A, Brettel K. Use of ruthenium dyes for subnanosecond detector fidelity testing in real time transient absorption. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2009; 80:043102. [PMID: 19405646 DOI: 10.1063/1.3117208] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Transient absorption spectroscopy is a powerful tool for the study of photoreactions on time scales from femtoseconds to seconds. Typically, reactions slower than approximately 1 ns are recorded by the "classical" technique; the reaction is triggered by an excitation flash, and absorption changes accompanying the reaction are recorded in real time using a continuous monitoring light beam and a detection system with sufficiently fast response. The pico- and femtosecond region can be accessed by the more recent "pump-probe" technique, which circumvents the difficulties of real time detection on a subnanosecond time scale. This is paid for by accumulation of an excessively large number of shots to sample the reaction kinetics. Hence, it is of interest to extend the classical real time technique as far as possible to the subnanosecond range. In order to identify and minimize detection artifacts common on a subnanosecond scale, like overshoot, ringing, and signal reflections, rigorous testing is required of how the detection system responds to fast changes of the monitoring light intensity. Here, we introduce a novel method to create standard signals for detector fidelity testing on a time scale from a few picoseconds to tens of nanoseconds. The signals result from polarized measurements of absorption changes upon excitation of ruthenium complexes {[Ru(bpy)(3)](2+) and a less symmetric derivative} by a short laser flash. Two types of signals can be created depending on the polarization of the monitoring light with respect to that of the excitation flash: a fast steplike bleaching at magic angle and a monoexponentially decaying bleaching for parallel polarizations. The lifetime of the decay can be easily varied via temperature and viscosity of the solvent. The method is applied to test the performance of a newly developed real time transient absorption setup with 300 ps time resolution and high sensitivity.
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Affiliation(s)
- Martin Byrdin
- CEA, IBITECS, Laboratoire de Photocatalyse et Biohydrogène, F-91191 Gif-sur-Yvette, France.
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18
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Roy E, Rohmer T, Gast P, Jeschke G, Alia A, Matysik J. Characterization of the Primary Radical Pair in Reaction Centers of Heliobacillus mobilis by 13C Photo-CIDNP MAS NMR. Biochemistry 2008; 47:4629-35. [DOI: 10.1021/bi800030g] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Esha Roy
- Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands, Leiden Institute of Physics, P.O. box 9504, 2300 RA Leiden, The Netherlands, and Physikalische Chemie, Universität Konstanz, 78457 Konstanz, Germany
| | - Thierry Rohmer
- Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands, Leiden Institute of Physics, P.O. box 9504, 2300 RA Leiden, The Netherlands, and Physikalische Chemie, Universität Konstanz, 78457 Konstanz, Germany
| | - Peter Gast
- Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands, Leiden Institute of Physics, P.O. box 9504, 2300 RA Leiden, The Netherlands, and Physikalische Chemie, Universität Konstanz, 78457 Konstanz, Germany
| | - Gunnar Jeschke
- Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands, Leiden Institute of Physics, P.O. box 9504, 2300 RA Leiden, The Netherlands, and Physikalische Chemie, Universität Konstanz, 78457 Konstanz, Germany
| | - A. Alia
- Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands, Leiden Institute of Physics, P.O. box 9504, 2300 RA Leiden, The Netherlands, and Physikalische Chemie, Universität Konstanz, 78457 Konstanz, Germany
| | - Jörg Matysik
- Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands, Leiden Institute of Physics, P.O. box 9504, 2300 RA Leiden, The Netherlands, and Physikalische Chemie, Universität Konstanz, 78457 Konstanz, Germany
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19
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Miyamoto R, Mino H, Kondo T, Itoh S, Oh-oka H. An Electron Spin-Polarized Signal of the P800+A1(Q)− State in the Homodimeric Reaction Center Core Complex of Heliobacterium modesticaldum. Biochemistry 2008; 47:4386-93. [DOI: 10.1021/bi701612v] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Ryo Miyamoto
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan, and Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
| | - Hiroyuki Mino
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan, and Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
| | - Toru Kondo
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan, and Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
| | - Shigeru Itoh
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan, and Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
| | - Hirozo Oh-oka
- Division of Material Science (Physics), Graduate School of Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8602, Japan, and Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan
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20
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Abstract
The reaction center (RC) of heliobacteria contains iron-sulfur centers as terminal electron acceptors, analogous to those of green sulfur bacteria as well as photosystem I in cyanobacteria and higher plants. Therefore, they all belong to the so-called type 1 RCs, in contrast to the type 2 RCs of purple bacteria and photosystem II containing quinone molecules. Although the architecture of the heliobacterial RC as a protein complex is still unknown, it forms a homodimer made up of two identical PshA core proteins, where two symmetrical electron transfer pathways along the C2 axis are assumed to be equally functional. Electrons are considered to be transferred from membrane-bound cytochrome c (PetJ) to a special pair P800, a chlorophyll a-like molecule A0, (a quinone molecule A1) and a [4Fe-4S] center Fx and, finally, to 2[4Fe-4S] centers FA/FB. No definite evidence has been obtained for the presence of functional quinone acceptor A1. An additional interesting point is that the electron transfer reaction from cytochrome c to P800 proceeds in a collisional mode. It is highly dependent on the temperature, ion strength and/or viscosity in a reaction medium, suggesting that a heme-binding moiety fluctuates in an aqueous phase with its amino-terminus anchored to membranes.
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Affiliation(s)
- Hirozo Oh-oka
- Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka, Japan.
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21
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Heinnickel M, Golbeck JH. Heliobacterial photosynthesis. PHOTOSYNTHESIS RESEARCH 2007; 92:35-53. [PMID: 17457690 DOI: 10.1007/s11120-007-9162-4] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2007] [Accepted: 03/23/2007] [Indexed: 05/15/2023]
Abstract
Heliobacteria contain Type I reaction centers (RCs) and a homodimeric core, but unlike green sulfur bacteria, they do not contain an extended antenna system. Given their simplicity, the heliobacterial RC (HbRC) should be ideal for the study of a prototypical homodimeric RC. However, there exist enormous gaps in our knowledge, particularly with regard to the nature of the secondary and tertiary electron acceptors. To paraphrase S. Neerken and J. Amesz (2001 Biochim Biophys Acta 1507:278-290): with the sole exception of primary charge separation, little progress has been made in recent years on the HbRC, either with respect to the polypeptide composition, or the nature of the electron acceptor chain, or the kinetics of forward and backward electron transfer. This situation, however, has changed. First, the low molecular mass polypeptide that contains the terminal FA and FB iron-sulfur clusters has been identified. The change in the lifetime of the flash-induced kinetics from 75 ms to 15 ms on its removal shows that the former arises from the P798+ [FA/FB]- recombination, and the latter from P798+ FX- recombination. Second, FX has been identified in HbRC cores by EPR and Mössbauer spectroscopy, and shown to be a [4Fe-4S]1+,2+ cluster with a ground spin state of S=3/2. Since all of the iron in HbRC cores is in the FX cluster, a ratio of approximately 22 Bchl g/P798 could be calculated from chemical assays of non-heme iron and Bchl g. Third, the N-terminal amino acid sequence of the FA/FB-containing polypeptide led to the identification and cloning of its gene. The expressed protein can be rebound to isolated HbRC cores, thereby regaining both the 75 ms kinetic phase resulting from P798+ [FA/FB]- recombination and the light-induced EPR resonances of FA- and FB-. The gene was named 'pshB' and the protein 'PshB' in keeping with the accepted nomenclature for Type I RCs. This article reviews the current state of knowledge on the structure and function of the HbRC.
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Affiliation(s)
- Mark Heinnickel
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA
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22
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Xu W, Chitnis PR, Valieva A, van der Est A, Brettel K, Guergova-Kuras M, Pushkar YN, Zech SG, Stehlik D, Shen G, Zybailov B, Golbeck JH. Electron transfer in cyanobacterial photosystem I: II. Determination of forward electron transfer rates of site-directed mutants in a putative electron transfer pathway from A0 through A1 to FX. J Biol Chem 2003; 278:27876-87. [PMID: 12721306 DOI: 10.1074/jbc.m302965200] [Citation(s) in RCA: 90] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The directionality of electron transfer in Photosystem I (PS I) is investigated using site-directed mutations in the phylloquinone (QK) and FX binding regions of Synnechocystis sp. PCC 6803. The kinetics of forward electron transfer from the secondary acceptor A1 (phylloquinone) were measured in mutants using time-resolved optical difference spectroscopy and transient EPR spectroscopy. In whole cells and PS I complexes of the wild-type both techniques reveal a major, slow kinetic component of tau approximately 300 ns while optical data resolve an additional minor kinetic component of tau approximately 10 ns. Whole cells and PS I complexes from the W697FPsaA and S692CPsaA mutants show a significant slowing of the slow kinetic component, whereas the W677FPsaB and S672CPsaB mutants show a less significant slowing of the fast kinetic component. Transient EPR measurements at 260 K show that the slow phase is approximately 3 times slower than at room temperature. Simulations of the early time behavior of the spin polarization pattern of P700+A1-, in which the decay rate of the pattern is assumed to be negligibly small, reproduce the observed EPR spectra at 260 K during the first 100 ns following laser excitation. Thus any spin polarization from P700+FX- in this time window is very weak. From this it is concluded that the relative amplitude of the fast phase is negligible at 260 K or its rate is much less temperature-dependent than that of the slow component. Together, the results demonstrate that the slow kinetic phase results from electron transfer from QK-A to FX and that this accounts for at least 70% of the electrons. Although the assignment of the fast kinetic phase remains uncertain, it is not strongly temperature dependent and it represents a minor fraction of the electrons being transferred. All of the results point toward asymmetry in electron transfer, and indicate that forward transfer in cyanobacterial PS I is predominantly along the PsaA branch.
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Affiliation(s)
- Wu Xu
- Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, Iowa 50011, USA
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23
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Gong XM, Agalarov R, Brettel K, Carmeli C. Control of electron transport in photosystem I by the iron-sulfur cluster FX in response to intra- and intersubunit interactions. J Biol Chem 2003; 278:19141-50. [PMID: 12626505 DOI: 10.1074/jbc.m301808200] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Photosystem I (PS I) is a transmembranal multisubunit complex that mediates light-induced electron transfer from plactocyanine to ferredoxin. The electron transfer proceeds from an excited chlorophyll a dimer (P700) through a chlorophyll a (A0), a phylloquinone (A1), and a [4Fe-4S] iron-sulfur cluster FX, all located on the core subunits PsaA and PsaB, to iron-sulfur clusters FA and FB, located on subunit PsaC. Earlier, it was attempted to determine the function of FX in the absence of FA/B mainly by chemical dissociation of subunit PsaC. However, not all PsaC subunits could be removed from the PS I preparations by this procedure without partially damaging FX. We therefore removed subunit PsaC by interruption of the psaC2 gene of PS I in the cyanobacterium Synechocystis sp. PCC 6803. Cells could not grow under photosynthetic conditions when subunit PsaC was deleted, yet the PsaC-deficient mutant cells grew under heterotrophic conditions and assembled the core subunits of PS I in which light-induced electron transfer from P700 to A1 occurred. The photoreduction of FX was largely inhibited, as seen from direct measurement of the extent of electron transfer from A1 to FX. From the crystal structure it can be seen that the removal of subunits PsaC, PsaD, and PsaE in the PsaC-deficient mutant resulted in the braking of salt bridges between these subunits and PsaB and PsaA and the formation of a net of two negative surface charges on PsaA/B. The potential induced on FX by these surface charges is proposed to inhibit electron transport from the quinone. In the complete PS I complex, replacement of a cysteine ligand of FX by serine in site-directed mutation C565S/D566E in subunit PsaB caused an approximately 10-fold slow down of electron transfer from the quinone to FX without much affecting the extent of this electron transfer compared with wild type. Based on these and other results, we propose that FX might have a major role in controlling electron transfer through PS I.
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Affiliation(s)
- Xiao-Min Gong
- Department of Biochemistry, Tel Aviv University, Tel Aviv 69978, Israel
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24
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KANDRASHKIN YUE, VOLLMANN W, STEHLIK D, SALIKHOV K, VAN DER EST A. The magnetic field dependence of the electron spin polarization in consecutive spin correlated radical pairs in type I photosynthetic reaction centres. Mol Phys 2002. [DOI: 10.1080/00268970110118240] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Hauska G, Schoedl T, Remigy H, Tsiotis G. The reaction center of green sulfur bacteria(1). BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1507:260-77. [PMID: 11687219 DOI: 10.1016/s0005-2728(01)00200-6] [Citation(s) in RCA: 138] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The composition of the P840-reaction center complex (RC), energy and electron transfer within the RC, as well as its topographical organization and interaction with other components in the membrane of green sulfur bacteria are presented, and compared to the FeS-type reaction centers of Photosystem I and of Heliobacteria. The core of the RC is homodimeric, since pscA is the only gene found in the genome of Chlorobium tepidum which resembles the genes psaA and -B for the heterodimeric core of Photosystem I. Functionally intact RC can be isolated from several species of green sulfur bacteria. It is generally composed of five subunits, PscA-D plus the BChl a-protein FMO. Functional cores, with PscA and PscB only, can be isolated from Prostecochloris aestuarii. The PscA-dimer binds P840, a special pair of BChl a-molecules, the primary electron acceptor A(0), which is a Chl a-derivative and FeS-center F(X). An equivalent to the electron acceptor A(1) in Photosystem I, which is tightly bound phylloquinone acting between A(0) and F(X), is not required for forward electron transfer in the RC of green sulfur bacteria. This difference is reflected by different rates of electron transfer between A(0) and F(X) in the two systems. The subunit PscB contains the two FeS-centers F(A) and F(B). STEM particle analysis suggests that the core of the RC with PscA and PscB resembles the PsaAB/PsaC-core of the P700-reaction center in Photosystem I. PscB may form a protrusion into the cytoplasmic space where reduction of ferredoxin occurs, with FMO trimers bound on both sides of this protrusion. Thus the subunit composition of the RC in vivo should be 2(FMO)(3)(PscA)(2)PscB(PscC)(2)PscD. Only 16 BChl a-, four Chl a-molecules and two carotenoids are bound to the RC-core, which is substantially less than its counterpart of Photosystem I, with 85 Chl a-molecules and 22 carotenoids. A total of 58 BChl a/RC are present in the membranes of green sulfur bacteria outside the chlorosomes, corresponding to two trimers of FMO (42 Bchl a) per RC (16 BChl a). The question whether the homodimeric RC is totally symmetric is still open. Furthermore, it is still unclear which cytochrome c is the physiological electron donor to P840(+). Also the way of NAD(+)-reduction is unknown, since a gene equivalent to ferredoxin-NADP(+) reductase is not present in the genome.
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Affiliation(s)
- G Hauska
- Lehstuhl für Zellbiologie und Pflanzenphysiologie, Universität Regensburg, Germany.
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26
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van der Est A. Light-induced spin polarization in type I photosynthetic reaction centres. BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1507:212-25. [PMID: 11687216 DOI: 10.1016/s0005-2728(01)00204-3] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The use of light-induced spin polarization to study the structure and function of type I reaction centres is reviewed. The absorption of light by these systems generates a series of sequential radical pairs, which exhibit spin polarization as a result of the correlation of the unpaired electron spins. A description of how the polarization patterns can be used to deduce the relative orientation of the radicals is given and the most important structural results from such studies on photosystem I (PS I) are summarized. Quinone exchange experiments which demonstrate the influence of protein-cofactor interactions on the polarization patterns are discussed. The results show that there are significant differences between the binding sites of the primary quinone acceptors in PS I and purple bacterial reaction centres and suggest that pi-pi interactions probably play a more important role in PS I. Studies using spin-polarized EPR transients and spectra to investigate the electron transfer pathway and kinetics are also reviewed. The results from PS I, green-sulphur bacteria and Heliobacteria are compared and the controversy surrounding the role of a quinone in the electron transfer in the latter two systems is discussed.
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Affiliation(s)
- A van der Est
- Department of Chemistry, Brock University, 500 Glenridge Avenue, L2S 3A1, St. Catharines, ON, Canada.
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27
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Rigby SE, Evans MC, Heathcote P. Electron nuclear double resonance (ENDOR) spectroscopy of radicals in photosystem I and related Type 1 photosynthetic reaction centres. BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1507:247-59. [PMID: 11687218 DOI: 10.1016/s0005-2728(01)00211-0] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- S E Rigby
- School of Biological Sciences, University of London, UK.
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28
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Neerken S, Amesz J. The antenna reaction center complex of heliobacteria: composition, energy conversion and electron transfer. BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1507:278-90. [PMID: 11687220 DOI: 10.1016/s0005-2728(01)00207-9] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
A survey is given of various aspects of the photosynthetic processes in heliobacteria. The review mainly refers to results obtained since 1995, which had not been covered earlier. It first discusses the antenna organization and pigmentation. The pigments of heliobacteria include some unusual species: bacteriochlorophyll (BChl) g, the main pigment, 8(1) hydroxy chlorophyll a, which acts as primary electron acceptor, and 4,4'-diaponeurosporene, a carotenoid with 30 carbon atoms. Energy conversion within the antenna is very fast: at room temperature thermal equilibrium among the approx. 35 BChls g of the antenna is largely completed within a few ps. This is then followed by primary charge separation, involving a dimer of BChl g (P798) as donor, but recent evidence indicates that excitation of the acceptor pigment 8(1) hydroxy chlorophyll a gives rise to an alternative primary reaction not involving excited P798. The final section of the review concerns secondary electron transfer, an area that is relatively poorly known in heliobacteria.
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Affiliation(s)
- S Neerken
- Department of Biophysics, Huygens Laboratory, Leiden University, P.O. Box 9504, 2300 RA, Leiden, The Netherlands.
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Sétif P, Seo D, Sakurai H. Photoreduction and reoxidation of the three iron-sulfur clusters of reaction centers of green sulfur bacteria. Biophys J 2001; 81:1208-19. [PMID: 11509338 PMCID: PMC1301603 DOI: 10.1016/s0006-3495(01)75779-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Iron-sulfur clusters are the terminal electron acceptors of the photosynthetic reaction centers of green sulfur bacteria and photosystem I. We have studied electron-transfer reactions involving these clusters in the green sulfur bacterium Chlorobium tepidum, using flash-absorption spectroscopic measurements. We show for the first time that three different clusters, named F(X), F(1), and F(2), can be photoreduced at room temperature during a series of consecutive flashes. The rates of electron escape to exogenous acceptors depend strongly upon the number of reduced clusters. When two or three clusters are reduced, the escape is biphasic, with the fastest phase being 12-14-fold faster than the slowest phase, which is similar to that observed after single reduction. This is explained by assuming that escape involves mostly the second reducible cluster. Evidence is thus provided for a functional asymmetry between the two terminal acceptors F(1) and F(2). From multiple-flash experiments, it was possible to derive the intrinsic recombination rates between P840(+) and reduced iron-sulfur clusters: values of 7, 14, and 59 s(-1) were found after one, two and three electron reduction of the clusters, respectively. The implications of our results for the relative redox potentials of the three clusters are discussed.
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Affiliation(s)
- P Sétif
- Commissariat à l'Energie Atomique, Département de Biologie Cellulaire et Moléculaire, Section de Bioénergétique and CNRS URA 2096, 91191 Gif sur Yvette, France.
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Kusumoto N, Sétif P, Brettel K, Seo D, Sakurai H. Electron transfer kinetics in purified reaction centers from the green sulfur bacterium Chlorobium tepidum studied by multiple-flash excitation. Biochemistry 1999; 38:12124-37. [PMID: 10508417 DOI: 10.1021/bi990452s] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Reaction center preparations from the green sulfur bacterium Chlorobium tepidum, which contain monoheme cytochrome c, were studied by flash-absorption spectroscopy in the near-UV, visible, and near-infrared regions. The decay kinetics of the photooxidized primary donor P840(+), together with the amount of photooxidized cytochrome c, were analyzed along a series of four flashes spaced by 1 ms: 95% of the P840(+) was reduced by cytochrome c with a t(1/2) of approximately 65 micros after the first flash, 80% with a t(1/2) of approximately 100 micros after the second flash, and 23% with a t(1/2) of approximately 100 micros after the third flash; after the fourth flash, almost no cytochrome c oxidation occurred. The observed rates, the establishment of redox equilibrium after each flash, and the total amount of photooxidizable cytochrome c are consistent with the presence of two equivalent cytochrome c molecules per photooxidizable P840. The data are well fitted assuming a standard free energy change DeltaG degrees of -53 meV for electron transfer from one cytochrome c to P840(+), DeltaG degrees being independent of the oxidation state of the other cytochrome c. These observations support a model with two monoheme cytochromes c which are symmetrically arranged around the reaction center core. From the ratio of menaquinone-7 to the bacteriochlorophyll pigment absorbing at 663 nm, it was estimated that our preparations contain 0.6-1.2 menaquinone-7 molecules per reaction center. However, no transient signal due to menaquinone could be observed between 360 and 450 nm in the time window from 10 ns to 4 micros. No recombination reaction between the primary partners P840(+) and A(0)(-) could be detected under normal conditions. Such a recombination was observed (t(1/2) approximately 19 ns) under highly reducing conditions or after accumulation of three electrons on the acceptor side during a series of flashes, showing that the secondary acceptors can stabilize three electrons. From our data, there is no evidence for involvement of menaquinone in charge separation in the reaction center of green sulfur bacteria.
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Affiliation(s)
- N Kusumoto
- Department of Biology, School of Education, Waseda University, Tokyo, Japan
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Aubert C, Mathis P, Eker AP, Brettel K. Intraprotein electron transfer between tyrosine and tryptophan in DNA photolyase from Anacystis nidulans. Proc Natl Acad Sci U S A 1999; 96:5423-7. [PMID: 10318899 PMCID: PMC21875 DOI: 10.1073/pnas.96.10.5423] [Citation(s) in RCA: 123] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Light-induced electron transfer reactions leading to the fully reduced, catalytically competent state of the flavin adenine dinucleotide (FAD) cofactor have been studied by flash absorption spectroscopy in DNA photolyase from Anacystis nidulans. The protein, overproduced in Escherichia coli, was devoid of the antenna cofactor, and the FAD chromophore was present in the semireduced form, FADH., which is inactive for DNA repair. We show that after selective excitation of FADH. by a 7-ns laser flash, fully reduced FAD (FADH-) is formed in less than 500 ns by electron abstraction from a tryptophan residue. Subsequently, a tyrosine residue is oxidized by the tryptophanyl radical with t(1)/(2) = 50 microseconds. The amino acid radicals were identified by their characteristic absorption spectra, with maxima at 520 nm for Trp. and 410 nm for TyrO. The newly discovered electron transfer between tyrosine and tryptophan occurred for approximately 40% of the tryptophanyl radicals, whereas 60% decayed by charge recombination with FADH- (t(1)/(2) = 1 ms). The tyrosyl radical can also recombine with FADH- but at a much slower rate (t(1)/(2) = 76 ms) than Trp. In the presence of an external electron donor, however, TyrO. is rereduced efficiently in a bimolecular reaction that leaves FAD in the fully reduced state FADH-. These results show that electron transfer from tyrosine to Trp. is an essential step in the process leading to the active form of photolyase. They provide direct evidence that electron transfer between tyrosine and tryptophan occurs in a native biological reaction.
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Affiliation(s)
- C Aubert
- Section de Bioénergétique, Commissariat à l'Energie Atomique Saclay (Centre National de la Recherche Scientifique, Unité de Recherche Associée 2096) 91191 Gif-sur-Yvette Cedex, France
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Brettel K, Vos MH. Spectroscopic resolution of the picosecond reduction kinetics of the secondary electron acceptor A1 in photosystem I. FEBS Lett 1999; 447:315-7. [PMID: 10214969 DOI: 10.1016/s0014-5793(99)00317-8] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
Forward electron transfer in photosystem I from Synechocystis sp. PCC 6803 has been studied in the picosecond time range with transient absorption spectroscopy in the blue and near-UV spectral regions. From the direct measurement, at 380-390 nm, of the reduction kinetics of the phylloquinone secondary acceptor A1 and from the absence of spectral evolution between 100 ps and 2 ns, we conclude that electron transfer, from the chlorophyll a primary acceptor A0, to A1 occurs directly and completely with a time constant of about 30 ps.
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Affiliation(s)
- K Brettel
- Section de Bioénergétique and CNRS URA 2096, DBCM, CEA Saclay, Gif-sur-Yvette, France.
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van der Est A, Hager-Braun C, Leibl W, Hauska G, Stehlik D. Transient electron paramagnetic resonance spectroscopy on green-sulfur bacteria and heliobacteria at two microwave frequencies. BIOCHIMICA ET BIOPHYSICA ACTA 1998; 1409:87-98. [PMID: 9838060 DOI: 10.1016/s0005-2728(98)00152-2] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
Spin polarized transient EPR spectra taken at X-band (9 GHz) and K-band (24 GHz) of membrane fragments of Chlorobium tepidum and Heliobacillus mobilis are presented along with the spectra of two fractions obtained in the purification of reaction centers (RC) from C. tepidum. The lifetime of P+. is determined by measuring the decay of the EPR signals following relaxation of the initial spin polarization. All samples except one of the RC fractions show evidence of light induced charge separation and formation of chlorophyll triplet states. The lifetime of P+. is found to be biexponential with components of 1.5 ms and 30 ms for C. tepidum and 1.0 and 4.5 ms for Hc. mobilis at 100 K. In both cases, the rates are assigned to recombination from F-X. The spin polarized radical pair spectra for both species are similar and those from Hc. mobilis at room temperature and 100 K are identical. In all cases, an emission/absorption polarization pattern with a net absorption is observed. A slight narrowing of the spectra and a larger absorptive net polarization is found at K-band. No out-of-phase echo modulation is observed. Taken together, the recombination kinetics, the frequency dependence of the spin polarization and the absence of an out-of-phase echo signal lead to the assignment of the spectra to the contribution from P+. to the state P+.F-X. The origin of the net polarization and its frequency dependence are discussed in terms of singlet-triplet mixing in the precursor. It is shown that the field-dependent polarization expected to develop during the 600-700 ps lifetime of P+.A-.0 is in qualitative agreement with the observed spectra. The identity that the acceptor preceding FX and the conflicting evidence from EPR, optical methods and chemical analyses of the samples are discussed.
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Affiliation(s)
- A van der Est
- Fachbereich Physik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany.
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Abstract
The reaction center is the key component for the primary events in the photochemical conversion of light into chemical energy. After excitation by light, a charge separation that spans the cell membrane is formed in the reaction center in a few hundred picoseconds with a quantum yield of essentially one. A conserved pattern in the cofactors and core proteins of reaction centers from different organisms can be defined based on comparisons of the three dimensional structure of two types of reaction centers. Different functional aspects of the reaction center are discussed, including the properties of the bacteriochlorophyll or chlorophyll dimer that constitutes the primary electron donor, the pathway of electron transfer, and the different functional roles of the electron acceptors. The implication of these results on the evolution of the reaction center is presented.
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Affiliation(s)
- J P Allen
- Department of Chemistry and Biochemistry and Center for the Study of Early Events in Photosynthesis, Arizona State University, Tempe 85287-1604, USA.
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