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For: Shchyolkina AK, Borisova OF. Stabilizing and destabilizing effects of intercalators on DNA triplexes. FEBS Lett 1997;419:27-31. [PMID: 9426213 DOI: 10.1016/s0014-5793(97)01417-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Number Cited by Other Article(s)
1
Peng X, Liu X, Tan L. Interaction of ruthenium(Ⅱ) polypyridyl complexes [Ru(phen)2(L)]2+ (L = PIP, p-HPIP and m-HPIP) with RNA poly(A)•poly(U): each complex unexpectedly exhibiting a destabilizing effect on RNA. Bioorg Chem 2023;135:106523. [PMID: 37027949 DOI: 10.1016/j.bioorg.2023.106523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 03/28/2023] [Accepted: 03/31/2023] [Indexed: 04/05/2023]
2
Dalla Pozza M, Abdullrahman A, Cardin CJ, Gasser G, Hall JP. Three's a crowd - stabilisation, structure, and applications of DNA triplexes. Chem Sci 2022;13:10193-10215. [PMID: 36277639 PMCID: PMC9473520 DOI: 10.1039/d2sc01793h] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Accepted: 08/02/2022] [Indexed: 12/16/2022]  Open
3
del Mundo IMA, Cho EJ, Dalby KN, Vasquez KM. A tunable assay for modulators of genome-destabilizing DNA structures. Nucleic Acids Res 2019;47:e73. [PMID: 30949695 PMCID: PMC6648359 DOI: 10.1093/nar/gkz237] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2019] [Revised: 03/21/2019] [Accepted: 03/25/2019] [Indexed: 11/24/2022]  Open
4
Shchyolkina AK, Kaluzhny DN, Borisova OF, Arndt-Jovin DJ, Jovin TM, Zhurkin VB. Conformational variability of recombination R-triplex formed by the mammalian telomeric sequence. J Biomol Struct Dyn 2015;34:1298-306. [PMID: 26308235 PMCID: PMC4867858 DOI: 10.1080/07391102.2015.1077344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
5
Silvers R, Keller H, Schwalbe H, Hengesbach M. Differential Scanning Fluorimetry for Monitoring RNA Stability. Chembiochem 2015;16:1109-14. [DOI: 10.1002/cbic.201500046] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2015] [Indexed: 11/05/2022]
6
Biver T, Boggioni A, García B, Leal JM, Ruiz R, Secco F, Venturini M. New aspects of the interaction of the antibiotic coralyne with RNA: coralyne induces triple helix formation in poly(rA)*poly(rU). Nucleic Acids Res 2009;38:1697-710. [PMID: 20008509 PMCID: PMC2836573 DOI: 10.1093/nar/gkp1146] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
7
Recent developments in the chemistry of deoxyribonucleic acid (DNA) intercalators: principles, design, synthesis, applications and trends. Molecules 2009;14:1725-46. [PMID: 19471193 PMCID: PMC6254398 DOI: 10.3390/molecules14051725] [Citation(s) in RCA: 104] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2009] [Revised: 04/20/2009] [Accepted: 05/05/2009] [Indexed: 01/17/2023]  Open
8
Kaluzhny DN, Timoshin VV, Borisova OF, Zhurkin VB, Florentiev VL, Shchyolkina AK. Intramolecular recombination R-triplex in solution: stabilization by bis-intercalator YOYO. J Biomol Struct Dyn 2008;26:301-6. [PMID: 18808196 PMCID: PMC4807166 DOI: 10.1080/07391102.2008.10507245] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
9
García B, Leal JM, Paiotta V, Ruiz R, Secco F, Venturini M. Role of the third strand in the binding of proflavine and pt-proflavine to poly(rA).2poly(rU): a thermodynamic and kinetic study. J Phys Chem B 2008;112:7132-9. [PMID: 18491933 DOI: 10.1021/jp800163n] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
10
Piergentili R, Mencarelli C. Drosophila melanogaster kl-3 and kl-5 Y-loops harbor triple-stranded nucleic acids. J Cell Sci 2008;121:1605-12. [PMID: 18430782 DOI: 10.1242/jcs.025320] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
11
Usha S, Johnson IM, Malathi R. Modulation of DNA intercalation by resveratrol and genistein. Mol Cell Biochem 2006;284:57-64. [PMID: 16477384 DOI: 10.1007/s11010-005-9013-6] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
12
He P, Xu Y, Fang Y. A Review: Electrochemical DNA Biosensors for Sequence Recognition. ANAL LETT 2005. [DOI: 10.1080/00032710500369794] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
13
Vorobjev YN. Study of the Mechanism of Interaction of Oligonucleotides with the 3′-Terminal Region of tRNAPhe by Computer Modeling. Mol Biol 2005. [DOI: 10.1007/s11008-005-0093-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
14
Vlcková M, Kubán V, Vicar J, Simánek V. Capillary zone electrophoretic studies of interactions of some quaternary isoquinoline alkaloids with DNA constituents and DNA. Electrophoresis 2005;26:1673-9. [PMID: 15812846 DOI: 10.1002/elps.200410193] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
15
Mariappan SVS, Cheng X, van Breemen RB, Silks LA, Gupta G. Analysis of GAA/TTC DNA triplexes using nuclear magnetic resonance and electrospray ionization mass spectrometry. Anal Biochem 2005;334:216-26. [PMID: 15494127 DOI: 10.1016/j.ab.2004.07.036] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2004] [Indexed: 10/26/2022]
16
Shchyolkina AK, Kaluzhny DN, Borisova OF, Hawkins ME, Jernigan RL, Jovin TM, Arndt-Jovin DJ, Zhurkin VB. Formation of an intramolecular triple-stranded DNA structure monitored by fluorescence of 2-aminopurine or 6-methylisoxanthopterin. Nucleic Acids Res 2004;32:432-40. [PMID: 14739235 PMCID: PMC373315 DOI: 10.1093/nar/gkh158] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
17
Beschetnova IA, Kaluzhny DN, Livshits MA, Shchyolkina AK, Borisova OF. Ethidium probing of the parallel double- and four-stranded structures formed by the telomeric DNA sequences dG(GT)4G and d(GT)5. J Biomol Struct Dyn 2003;20:789-99. [PMID: 12744708 DOI: 10.1080/07391102.2003.10506895] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
18
Walter A, Schütz H, Simon H, Birch-Hirschfeld E. Evidence for a DNA triplex in a recombination-like motif: I. Recognition of Watson-Crick base pairs by natural bases in a high-stability triplex. J Mol Recognit 2001;14:122-39. [PMID: 11301482 DOI: 10.1002/jmr.528] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
19
Shchyolkina AK, Timofeev EN, Lysov YP, Florentiev VL, Jovin TM, Arndt-Jovin DJ. Protein-free parallel triple-stranded DNA complex formation. Nucleic Acids Res 2001;29:986-95. [PMID: 11160932 PMCID: PMC29604 DOI: 10.1093/nar/29.4.986] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
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