Synthesis of a new 4Fe4S cluster with a biomimetic bulky thiolate ligand as model for the [Fe4S4] states of high potential iron-sulfur proteins

Synthesis of a Nitrogenase PN -Cluster Model with [Fe8 S7 (μ-Sthiolate )2 ] Core from the All-Ferric [Fe4 S4 (Sthiolate )4 ] Cubane Synthon

Constructing synthetic models of the nitrogenase PN -cluster has been a long-standing synthetic challenge. Here, we report an optimal nitrogenase PN -cluster model [{(TbtS)(OEt2 )Fe4 S3 }2 (μ-STbt)2 (μ6 -S)] (2) [Tbt=2,4,6-tris{bis(trimethylsilyl)methyl}phenyl] that is the closest synthetic mimic constructed to date. Of note is that two thiolate ligands and one hexacoordinated sulfide are connecting the two Fe4 S3 incomplete cubanes similar to the native PN -cluster, which has never been achieved. Cluster 2 has been characterized by X-ray crystallography and relevant physico-chemical methods. The variable temperature magnetic moments of 2 indicate a singlet ground state (S=0). The Mössbauer spectrum of 2 exhibits two doublets with an intensity ratio of 3:1, which suggests the presence of two types of iron sites. The synthetic pathway of the cluster 2 could indicate the native PN -cluster maturation process as it has been achieved from the Fe4 S4 cubane Fe4 S4 (STbt)4 (1).

Phase and redox shifted four iron/four sulfur clusters: fluorous analogs of metalloenzyme cofactors

Reactions of (1) [Q]2[Fe4S4(SC(CH3)3)4] and the fluorous thiols HS(CH2)nRf8 (n = 2, 3; Rf8 = (CF2)7CF3)), or (2) [Na]2[Fe4S4(S(CH2)nRf8)4] (n = 2, 3) and [PhCH2P((CH2)3Rf6)3][Br] or [PPN][Cl] (PPN = Ph3P[horiz bar, triple dot above]N[horiz bar, triple dot above]PPh3), give the title compounds [Q]2[Fe4S4(S(CH2)nRf8)4], comprised of a fluorous dianion and in some cases fluorous cations, with (1) Q/n = Ph4P/2 (, 67%), Ph4P/3 (, 67%), Me4N/3 (69%), and Ph3P(CH2)2Rf6/2 (73%) or (2) PhCH2P((CH2)3Rf6)3/2 (, 39%), PhCH2P((CH2)3Rf6)3/3 (, 63%), and PPN/2 (36%). The educt [Ph3P(CH2)2Rf6]2[Fe4S4(SC(CH3)3)4] is in turn prepared from FeCl3, HSC(CH3)3/CH3ONa, and [Ph3P(CH2)2Rf6][I], and the educts [Na]2[Fe4S4(S(CH2)nRf8)4] from [Na]2[Fe4S4(SC(CH3)3)4] and HS(CH2)nRf8. The SCH2(1)H and (13)C NMR signals of these paramagnetic salts appear 8.7-10.3 and 32.3-34.9 ppm downfield from those of the corresponding thiols, but the chemical shifts of other signals are nearly normal. The UV-visible spectra show bands similar to those of non-fluorous analogs (290-298 nm and 406-415 nm; ε = 25 700 and 19 200 M(-1) cm(-1) for ). The singly fluorous salts are soluble in organic solvents of moderate polarity, but not in fluorous solvents. The doubly fluorous salts , are soluble in all fluorous solvents assayed, with partition coefficients of >99.65 : <0.35 (CF3C6F11/toluene) and 93.2-93.1 : 6.9-6.8 (FC-72/THF). Cyclic voltammograms carried out using a platinum working microelectrode show that is 0.08 V thermodynamically easier to reduce than .

Stabilities of cubane type [Fe₄S₄(SR)₄](2-) clusters in partially aqueous media

The stability of cubane-type [Fe₄S₄(SR)₄](2-) clusters in mixed organic/aqueous solvents was examined as an initial step in the development of stable water-soluble cluster compounds possibly suitable for reconstitution of scaffold proteins in protein biosynthesis. The research involves primarily spectrophotometric assessment of stability in 20-80% Me₂SO/aqueous media (v/v), from which it was found that conventional clusters tend to be stable for up to 12h in 60% Me₂SO but are much less stable at higher aqueous content. α-Cyclodextrin mono- and dithioesters and thiols were prepared as ligand precursors for cluster binding, which was demonstrated by spectroscopic methods. A potentially bidentate cyclodextrin dithiolate was found to be relatively effective for cluster stabilization in 40% Me₂SO, suggesting (together with earlier results) that other exceptionally large thiolate ligands may promote cluster stability in aqueous media.

Investigation of the Reduced High-Potential Iron−Sulfur Protein from Chromatium vinosum and Relevant Model Compounds: A Unified Picture of the Electronic Structure of [Fe4S4]2+ Systems through Magnetic and Optical Studies

Magnetization measurements and variable temperature optical spectroscopy have been used to investigate, within the 4-300 K temperature range, the electronic structure of the reduced high-potential iron protein (HiPIP) from Chromatium vinosum and the model compounds (Cat)(2)[Fe(4)S(4)(SR)(4)], where RS(-) = 2,4,6-triisopropylphenylthiolate (1), 2,6-diphenylphenylthiolate (2), diphenylmethylthiolate (3), 2,4,6-triisopropylbenzylthiolate (4, 4'), 2,4,6-triphenylbenzylthiolate (5, 5'), 2,4,6-tri-tert-butylbenzylthiolate (6), and Cat(+) = (+)NEt(4) (1, 2, 3, 4', 5', 6), (+)PPh(4) (4, 5). The newly synthesized 2(2)(-), 3(2)(-), 5(2)(-), and 6(2)(-) complexes are, as 1(2)(-) and 4(2)(-), excellent models of the reduced HiPIPs: they exhibit the [Fe(4)S(4)](3+/2+) redox couple, because of the presence of bulky ligands which stabilize the [Fe(4)S(4)](3+) oxidized core. Moreover, the presence of SCH(2) groups in 4(2)(-), 5(2)(-), and 6(2)(-), as in the [Fe(4)S(4)] protein cores, makes them good biomimetic models of the HiPIPs. The X-ray structure of 2 is reported: it crystallizes in the orthorhombic space group Pcca with no imposed symmetry and a D(2)(d)()-distorted geometry of the [Fe(4)S(4)](2+) core. Fit of the magnetization data of the reduced HiPIP and of the 1, 2, 3, 4, 5, and 6 compounds within the exchange and double exchange theoretical framework leads to exchange coupling parameters J = 261-397 cm(-)(1). A firm determination of the double exchange parameters B or, equivalently, the transfer integrals beta = 5B could not be achieved that way. The obtained |B| values remain however high, attesting thus to the strength of the spin-dependent electronic delocalization which is responsible for lowest lying electronic states being characterized by delocalized mixed-valence pairs of maximum spin (9)/(2). Electronic properties of these systems are then accounted for by the population of a diamagnetic ground level and excited paramagnetic triplet and quintet levels, which are respectively J and 3J above the ground level. Optical studies of 1, 2, 4', 5', and 6 but also of (NEt(4))(2)[Fe(4)S(4)(SCH(2)C(6)H(5))(4)] and the isomorph (NEt(4))(2)[Fe(4)S(4)(S-t-Bu)(4)] and (NEt(4))(2)[Fe(4)Se(4)(S-t-Bu)(4)] compounds reveal two absorption bands in the near infrared region, at 705-760 nm and 1270-1430 nm, which appear to be characteristic of valence-delocalized and ferromagnetically coupled [Fe(2)X(2)](+) (X = S, Se) units. The |B| and |beta| values can be directly determined from the location at 10|B| of the low-energy band, and are respectively of 699-787 and 3497-3937 cm(-)(1). Both absorption bands are also present in the 77 K spectrum of the reduced HiPIP, at 700 and 1040 nm (Cerdonio, M.; Wang, R.-H.; Rawlings, J.; Gray, H. B. J. Am. Chem. Soc. 1974, 96, 6534-6535). The blue shift of the low-energy band is attributed to the inequivalent environments of the Fe sites in the protein, rather than to an increase of |beta| when going from the models to the HiPIP. The small differences observed in known geometries of [Fe(4)S(4)](2+) clusters, especially in the Fe-Fe distances, cannot probably lead to drastic changes in the direct Fe-Fe interactions (parameter beta) responsible for the delocalization phenomenon. These differences are however magnetostructurally significant as shown by the 261-397 cm(-)(1) range spanned by J. The cluster's geometry, hence the efficiency of the Femicro(3)-S-Fe superexchange pathways, is proposed to be controlled by the more or less tight fit of the cluster within the cavity provided by its environment.