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Mansouri R, Bouzina A, Sekiou O, Aouf Z, Zerrouki R, Ibrahim-Ouali M, Aouf NE. Novel pseudonucleosides and sulfamoyl-oxazolidinone β- D-glucosamine derivative as anti-COVID-19: design, synthesis, and in silico study. J Biomol Struct Dyn 2023; 41:10999-11016. [PMID: 37098814 DOI: 10.1080/07391102.2023.2203246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 12/10/2022] [Indexed: 04/27/2023]
Abstract
New pseudonucleosides containing cyclic sulfamide moiety and sulfamoyl β-D-glucosamine derivative are described. These pseudonucleosides are synthesized in good yields starting from chlorosulfonyl isocyanate and β-D-glucosamine hydrochloride in five steps; (protection, acetylation, removal of the Boc group, sulfamoylation, and cyclization). Further, novel glycosylated sulfamoyloxazolidin-2-one is prepared in three steps; carbamoylation, sulfamoylation, and intramolecular cyclization. The structures of the synthesized compounds were confirmed by usual spectroscopic and spectrometric methods NMR, IR, MS, and EA. Interesting molecular docking of the prepared pseudonucleosides and (Beclabuvir, Remdesivir) drugs with SARS-CoV-2/Mpro (PDB:5R80) was conducted using the same parameters for a fair comparison. A low binding affinity of the synthesized compounds compared to the Beclabuvir and other analysis showed that pseudonucleosides have the ability to inhibit SARS-CoV-2. After the motivating results of molecular docking study, the complex between the SARS-CoV-2 Mpro and compound 7 was subjected to 100 ns molecular dynamics (MD) simulation using Desmond module of Schrodinger suite, during which the receptor-ligand complex showed substantial stability after 10 ns of MD simulation. Also, we studied the prediction of absorption, distribution, properties of metabolism, excretion, and toxicity (ADMET) of the synthesized compounds.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Rachida Mansouri
- Laboratory of Applied Organic Chemistry, Bioorganic Chemistry Group, Sciences Faculty, Chemistry Department, Badji Mokhtar-Annaba University, Annaba, Algeria
- Environment, modeling, and climate change department, Environmental Research Center (CRE), Box 12, 23000 Annaba, Algeria
| | - Abdeslem Bouzina
- Laboratory of Applied Organic Chemistry, Bioorganic Chemistry Group, Sciences Faculty, Chemistry Department, Badji Mokhtar-Annaba University, Annaba, Algeria
| | - Omar Sekiou
- Environment, modeling, and climate change department, Environmental Research Center (CRE), Box 12, 23000 Annaba, Algeria
| | - Zineb Aouf
- Laboratory of Applied Organic Chemistry, Bioorganic Chemistry Group, Sciences Faculty, Chemistry Department, Badji Mokhtar-Annaba University, Annaba, Algeria
| | - Rachida Zerrouki
- Laboratoire PEIRENE, EA7500 Université de Limoges, 123 avenue Albert Thomas, 87000, Limoges cedex, France
| | | | - Nour Eddine Aouf
- Laboratory of Applied Organic Chemistry, Bioorganic Chemistry Group, Sciences Faculty, Chemistry Department, Badji Mokhtar-Annaba University, Annaba, Algeria
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2
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Ravindar L, Hasbullah SA, Hassan NI, Qin HL. Cross‐Coupling of C‐H and N‐H Bonds: a Hydrogen Evolution Strategy for the Construction of C‐N Bonds. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Lekkala Ravindar
- Universiti Kebangsaan Malaysia Fakulti Teknologi dan Sains Maklumat Chemical Sciences Faculty of Science & Technology 43600 Bandar Baru Bangi MALAYSIA
| | - Siti Aishah Hasbullah
- Universiti Kebangsaan Malaysia Fakulti Sains dan Teknologi Chemical Sciences Faculty of Science & Technology 43600 Bandar Baru Bangi MALAYSIA
| | - Nurul Izzaty Hassan
- Universiti Kebangsaan Malaysia Fakulti Sains dan Teknologi Chemical Sciences Faculty of Science & Technology 43600 Bandar Baru Bangi MALAYSIA
| | - Hua-Li Qin
- Wuhan University of Technology School of Chemistry 430070 Hubei CHINA
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Kiyokawa K, Jou K, Minakata S. Intramolecular C-H Amination of N-Alkylsulfamides by tert-Butyl Hypoiodite or N-Iodosuccinimide. Chemistry 2021; 27:13971-13976. [PMID: 34403187 DOI: 10.1002/chem.202102635] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Indexed: 01/15/2023]
Abstract
1,3-Diamines are an important class of compounds that are broadly found in natural products and are also widely used as building blocks in organic synthesis. Although the intramolecular C-H amination of N-alkylsulfamide derivatives is a reliable method for the construction of 1,3-diamine structures, the majority of these methods involve the use of a transition-metal catalyst. We herein report on a new transition-metal-free method using tert-butyl hypoiodite (t-BuOI) or N-iodosuccinimide (NIS), enabling secondary non-benzylic and tertiary C-H amination reactions to proceed. The cyclic sulfamide products can be easily transformed into 1,3-diamines. Mechanistic investigations revealed that amination reactions using t-BuOI or NIS each proceed via different pathways.
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Affiliation(s)
- Kensuke Kiyokawa
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Yamadaoka 2-1, Suita, Osaka, 565-0871, Japan
| | - Keisuke Jou
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Yamadaoka 2-1, Suita, Osaka, 565-0871, Japan
| | - Satoshi Minakata
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Yamadaoka 2-1, Suita, Osaka, 565-0871, Japan
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Jun JJ, Xie X. Implementation of Diverse Synthetic and Strategic Approaches to Biologically Active Sulfamides. ChemistrySelect 2021. [DOI: 10.1002/slct.202004765] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Jaden J. Jun
- Department of Pharmaceutical Sciences and Computational Chemical Genomics Screening Center School of Pharmacy 335 Sutherland Drive 206 Salk Pavilion University of Pittsburgh Pittsburgh PA15261 USA
- NIH National Center of Excellence for Computational Drug Abuse Research
- Drug Discovery Institute
| | - Xiang‐Qun Xie
- Department of Pharmaceutical Sciences and Computational Chemical Genomics Screening Center School of Pharmacy 335 Sutherland Drive 206 Salk Pavilion University of Pittsburgh Pittsburgh PA15261 USA
- NIH National Center of Excellence for Computational Drug Abuse Research
- Drug Discovery Institute
- Departments of Computational Biology and Structural Biology Director of CCGS and NIDA CDAR Centers School of Medicine University of Pittsburgh Pittsburgh Pennsylvania 15261 United States
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5
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Spillane W, Malaubier JB. Sulfamic Acid and Its N- and O-Substituted Derivatives. Chem Rev 2013; 114:2507-86. [DOI: 10.1021/cr400230c] [Citation(s) in RCA: 85] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- William Spillane
- School
of Chemistry, National University of Ireland, Galway, University Road, Galway, Ireland
| | - Jean-Baptiste Malaubier
- Manufacturing Science
and
Technology, Roche Ireland Limited, Clarecastle, Co. Clare, Ireland
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Affiliation(s)
- Aliye Gediz Erturk
- a Faculty of Science and Arts, Department of Chemistry , Ordu University , Ordu , Turkey
| | - Yunus Bekdemir
- b Canik Basari University, Department of Molecular Biology, Gurgenyatak Campus , 55080 , Canik/ Samsun , Turkey
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Bendjeddou A, Abbaz T, Regainia Z, Aouf NE. A new class of heterocycles: 1,4,3,5-oxathiadiazepane 4,4-dioxides. Molecules 2012; 17:1890-9. [PMID: 22334067 PMCID: PMC6268153 DOI: 10.3390/molecules17021890] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2012] [Revised: 02/06/2012] [Accepted: 02/08/2012] [Indexed: 11/16/2022] Open
Abstract
This work reports the synthesis of novel 1,4,3,5-oxathiadiazepanes 4,4-dioxides from the reaction of N'-benzyl-N-(2-hydroxyethyl)-sarcosine or proline sulfamide with aromatic aldehydes under acid catalysis. To prepare the starting materials N-Boc-sulfamide derivatives of sarcosine or proline were alkylated with benzyl alcohol under Mitsunobu reaction conditions, the Boc group was removed chemoselectively by acidolysis, and the resulting product reduced to the corresponding alcohol in good yields.
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Affiliation(s)
- Amel Bendjeddou
- Laboratoire de Chimie Organique Appliquée, Groupe de chimie Hétérocyclique, Département de Chimie, Université d'Annaba, BP 12, 23000, Algérie.
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Dehamchia M, Regainia Z. Synthesis of new fused benzothiadiazepines and macrocyclic sulfamides starting from n,n-disubstituted sulfamides and n(boc)-sulfamides. ISRN ORGANIC CHEMISTRY 2012; 2012:810938. [PMID: 24052851 PMCID: PMC3767331 DOI: 10.5402/2012/810938] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/11/2012] [Accepted: 02/02/2012] [Indexed: 11/23/2022]
Abstract
Herein, we describe an efficient one-step synthesis of new fused benzothiadiazepine-1,1-dioxides and macrocyclic sulfamides. The synthesis of these compounds was achieved in moderate yields starting from previously described N,N′-disubstituted symmetric sulfamides and N-tert-butoxycarbonyl, N′-alkyl sulfamide. The chemical structures of all the new compounds reported in this work were confirmed by NMR, IR, and mass spectrometry. These compounds are beneficial building blocks that can be used in deriving new chemical entities that exert a wide spectrum of pharmacological activities.
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Affiliation(s)
- Mohamed Dehamchia
- Chemistry of Heterocycles Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, University of Annaba, P.O. Box 12, Annaba 23000, Algeria ; Department of Chemistry, Katholieke Universiteit Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
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Lu H, Jiang H, Hu Y, Wojtas L, Zhang XP. Chemoselective intramolecular allylic C–H amination versus CC aziridination through Co(ii)-based metalloradical catalysis. Chem Sci 2011. [DOI: 10.1039/c1sc00366f] [Citation(s) in RCA: 94] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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Kurokawa T, Kim M, Du Bois J. Synthesis of 1,3-Diamines Through Rhodium-Catalyzed CH Insertion. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200806192] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Abstract
A grand opening: N-Boc-N-alkylsulfamides are effective substrates for the title transformation. Oxidative cyclization is highly chemoselective as well as being both stereospecific and diastereoselective. With the advent of new protocols that facilitate ring opening of the six-membered-ring heterocyclic products, access to differentially protected 1,3-diamines has been made possible (see scheme).
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Affiliation(s)
- Toshiki Kurokawa
- Department of Chemistry, Stanford University, Stanford, CA 94305-5080, USA
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Bendjeddou A, Djebbar H, Berredjem M, Hattab Z, Regainia Z, Aouf NE. Cyclosulfamides as Constraint Dipeptides: The Synthesis and Structure of Chiral Substituted 1,2,5-Thiadiazolidine 1,1-Dioxides: Evaluation of the Toxicity. PHOSPHORUS SULFUR 2007. [DOI: 10.1080/10426500500327014] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Amel Bendjeddou
- a Laboratoire de Chimie Organique Appliquée, Groupe de Chimie Bioorganique, Faculté des Sciences, Département de Chimie , Université d'Annaba , Algérie
| | - Houria Djebbar
- a Laboratoire de Chimie Organique Appliquée, Groupe de Chimie Bioorganique, Faculté des Sciences, Département de Chimie , Université d'Annaba , Algérie
| | - Malika Berredjem
- a Laboratoire de Chimie Organique Appliquée, Groupe de Chimie Bioorganique, Faculté des Sciences, Département de Chimie , Université d'Annaba , Algérie
| | - Z'Hour Hattab
- a Laboratoire de Chimie Organique Appliquée, Groupe de Chimie Bioorganique, Faculté des Sciences, Département de Chimie , Université d'Annaba , Algérie
| | - Zine Regainia
- a Laboratoire de Chimie Organique Appliquée, Groupe de Chimie Bioorganique, Faculté des Sciences, Département de Chimie , Université d'Annaba , Algérie
| | - Nour-Eddine Aouf
- a Laboratoire de Chimie Organique Appliquée, Groupe de Chimie Bioorganique, Faculté des Sciences, Département de Chimie , Université d'Annaba , Algérie
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Berredjem M, Winum J, Toupet L, Masmoudi O, Aouf N, Montero J. N‐Chlorosulfonyloxazolidin‐2‐ones: Synthesis, Structure, and Reactivity Toward Aminoesters. SYNTHETIC COMMUN 2006. [DOI: 10.1081/scc-120030753] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Malika Berredjem
- a Laboratoire de Chimie Bioorganique , Université d'Annaba , Annaba, Algérie
| | - Jean‐Yves Winum
- b Laboratoire de Chimie Biomoléculaire, UMR 5032 , Université Montpellier II, ENSCM , 8 rue de l'Ecole Normale, 34296, Montpellier, Cedex, France
| | - Loic Toupet
- c Groupe Matière Condensée et Matériaux, UMR 6626 , Université de Rennes I , Rennes, France
| | - Ouafae Masmoudi
- b Laboratoire de Chimie Biomoléculaire, UMR 5032 , Université Montpellier II, ENSCM , 8 rue de l'Ecole Normale, 34296, Montpellier, Cedex, France
| | - Nour‐Eddine Aouf
- a Laboratoire de Chimie Bioorganique , Université d'Annaba , Annaba, Algérie
| | - Jean‐Louis Montero
- b Laboratoire de Chimie Biomoléculaire, UMR 5032 , Université Montpellier II, ENSCM , 8 rue de l'Ecole Normale, 34296, Montpellier, Cedex, France
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Bendjeddou A, Djeribi R, Regainia Z, Aouf NE. N,N'-SUBStituted 1,2,5 thiadiazolidine 1,1-dioxides: synthesis, selected chemical and spectral proprieties and antimicrobial evaluation. Molecules 2005; 10:1387-98. [PMID: 18007534 PMCID: PMC6147672 DOI: 10.3390/10111387] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2005] [Revised: 09/05/2005] [Accepted: 09/10/2005] [Indexed: 11/25/2022] Open
Abstract
The sulfamide functional group is increasingly relevant in both medicinal and bioorganic chemistry. We report here practical access to a series of N2,N5-substituted five-membered cyclosulfamides. The five-membered heterocyclic motif was prepared starting from proteogenic amino acids and chlorosulfonyl isocyanate via the Mitsunobu reaction. Selected chemical and spectral proprieties and the antimicrobial evaluation of these compounds are detailed.
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Nadia K, Malika B, Nawel K, Yazid BM, Zine R, Aouf NE. Simple and efficient cleavage reaction of the boc group in heterocyclic compounds. J Heterocycl Chem 2004. [DOI: 10.1002/jhet.5570410109] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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