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For: Studholme DJ, Dixon R. In silico analysis of the sigma54-dependent enhancer-binding proteins in Pirellula species strain 1. FEMS Microbiol Lett 2004;230:215-25. [PMID: 14757243 DOI: 10.1016/s0378-1097(03)00897-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
Number Cited by Other Article(s)
1
Wecker P, Klockow C, Ellrott A, Quast C, Langhammer P, Harder J, Glöckner FO. Transcriptional response of the model planctomycete Rhodopirellula baltica SH1(T) to changing environmental conditions. BMC Genomics 2009;10:410. [PMID: 19725962 PMCID: PMC2754498 DOI: 10.1186/1471-2164-10-410] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2009] [Accepted: 09/02/2009] [Indexed: 12/03/2022]  Open
2
Tripathi LP, Sowdhamini R. Genome-wide survey of prokaryotic serine proteases: analysis of distribution and domain architectures of five serine protease families in prokaryotes. BMC Genomics 2008;9:549. [PMID: 19019219 PMCID: PMC2605481 DOI: 10.1186/1471-2164-9-549] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2008] [Accepted: 11/19/2008] [Indexed: 12/29/2022]  Open
3
Hieu CX, Voigt B, Albrecht D, Becher D, Lombardot T, Glöckner FO, Amann R, Hecker M, Schweder T. Detailed proteome analysis of growing cells of the planctomyceteRhodopirellula baltica SH1T. Proteomics 2008;8:1608-23. [DOI: 10.1002/pmic.200701017] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
4
Jones J, Studholme DJ, Knight CG, Preston GM. Integrated bioinformatic and phenotypic analysis of RpoN-dependent traits in the plant growth-promoting bacterium Pseudomonas fluorescens SBW25. Environ Microbiol 2007;9:3046-64. [DOI: 10.1111/j.1462-2920.2007.01416.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
5
Rodionov DA. Comparative genomic reconstruction of transcriptional regulatory networks in bacteria. Chem Rev 2007;107:3467-97. [PMID: 17636889 PMCID: PMC2643304 DOI: 10.1021/cr068309+] [Citation(s) in RCA: 167] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Bose M, Slick D, Sarto MJ, Roberts D, Roberts J, Barber RD. Identification of SmtB/ArsR cis elements and proteins in archaea using the Prokaryotic InterGenic Exploration Database (PIGED). ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL 2006;2:39-49. [PMID: 16877320 PMCID: PMC2685587 DOI: 10.1155/2006/837139] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
7
Poggio S, Osorio A, Dreyfus G, Camarena L. The flagellar hierarchy of Rhodobacter sphaeroides is controlled by the concerted action of two enhancer-binding proteins. Mol Microbiol 2006;58:969-83. [PMID: 16262784 DOI: 10.1111/j.1365-2958.2005.04900.x] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
8
Fuerst JA. INTRACELLULAR COMPARTMENTATION IN PLANCTOMYCETES. Annu Rev Microbiol 2005;59:299-328. [PMID: 15910279 DOI: 10.1146/annurev.micro.59.030804.121258] [Citation(s) in RCA: 190] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
9
Kroos L. Eukaryotic-like signaling and gene regulation in a prokaryote that undergoes multicellular development. Proc Natl Acad Sci U S A 2005;102:2681-2. [PMID: 15710872 PMCID: PMC549479 DOI: 10.1073/pnas.0500157102] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
10
Jelsbak L, Givskov M, Kaiser D. Enhancer-binding proteins with a forkhead-associated domain and the sigma54 regulon in Myxococcus xanthus fruiting body development. Proc Natl Acad Sci U S A 2005;102:3010-5. [PMID: 15668379 PMCID: PMC549468 DOI: 10.1073/pnas.0409371102] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
11
García-González V, Govantes F, Porrúa O, Santero E. Regulation of the Pseudomonas sp. strain ADP cyanuric acid degradation operon. J Bacteriol 2005;187:155-67. [PMID: 15601699 PMCID: PMC538813 DOI: 10.1128/jb.187.1.155-167.2005] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
12
Lombardot T, Bauer M, Teeling H, Amann R, Glöckner FO. The transcriptional regulator pool of the marine bacteriumRhodopirellula balticaSH 1Tas revealed by whole genome comparisons. FEMS Microbiol Lett 2005;242:137-45. [PMID: 15621430 DOI: 10.1016/j.femsle.2004.10.049] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2004] [Revised: 09/30/2004] [Accepted: 10/29/2004] [Indexed: 11/17/2022]  Open
13
Kutlu B, Naamane N, Berthou L, Eizirik DL. New Approaches forin SilicoIdentification of Cytokine-Modified β Cell Gene Networks. Ann N Y Acad Sci 2004;1037:41-58. [PMID: 15699492 DOI: 10.1196/annals.1337.007] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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