1
|
Content of Pb and Zn in Sediments and Hydrobionts as Ecological Markers for Pollution Assessment of Freshwater Objects in Bulgaria—A Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph19159600. [PMID: 35954957 PMCID: PMC9367917 DOI: 10.3390/ijerph19159600] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Revised: 07/29/2022] [Accepted: 08/01/2022] [Indexed: 01/11/2023]
Abstract
The purpose of this review is to describe the contents of Pb and Zn in sediments and hydrobionts as ecological markers for the pollution assessment of freshwater objects in Bulgaria, and the data are compared with other countries and regions. Symmetry was found regarding the levels of Zn in the sediment of the Ovcharitsa and Zhrebchevo dams, which were twice the MAC for arable land (Regulation № 3 of Bulgarian legislation). Symmetry was also observed between the results for Zn and Pb in the studied sediments, and the “favorites” in terms of content were the samples from Zhrebchevo Dam and, especially, from Ovcharitsa Dam. Asymmetry was established in the accumulation of Zn in the livers of carps inhabiting Topolnitsa Dam in comparison with these in Ovcharitsa Dam. A similar asymmetry was observed for lead. The analysis of the muscles and livers of the studied fish showed an asymmetry in the accumulation of zinc, and this process was more intense in the liver. Symmetry was found in the accumulation of Pb in the liver and muscle tissues of the carp from the studied water bodies.
Collapse
|
2
|
Jeanray N, Marée R, Pruvot B, Stern O, Geurts P, Wehenkel L, Muller M. Phenotype classification of zebrafish embryos by supervised learning. PLoS One 2015; 10:e0116989. [PMID: 25574849 PMCID: PMC4289190 DOI: 10.1371/journal.pone.0116989] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2014] [Accepted: 12/18/2014] [Indexed: 11/18/2022] Open
Abstract
Zebrafish is increasingly used to assess biological properties of chemical substances and thus is becoming a specific tool for toxicological and pharmacological studies. The effects of chemical substances on embryo survival and development are generally evaluated manually through microscopic observation by an expert and documented by several typical photographs. Here, we present a methodology to automatically classify brightfield images of wildtype zebrafish embryos according to their defects by using an image analysis approach based on supervised machine learning. We show that, compared to manual classification, automatic classification results in 90 to 100% agreement with consensus voting of biological experts in nine out of eleven considered defects in 3 days old zebrafish larvae. Automation of the analysis and classification of zebrafish embryo pictures reduces the workload and time required for the biological expert and increases the reproducibility and objectivity of this classification.
Collapse
Affiliation(s)
- Nathalie Jeanray
- GIGA-Development, Stem Cells and Regenerative Medicine, Organogenesis and Regeneration, University of Liège, Liège, Belgium
- GIGA-Systems Biology and Chemical Biology, Dept. EE & CS, University of Liège, Liège, Belgium
| | - Raphaël Marée
- GIGA Bioinformatics Core Facility, University of Liège, Liège, Belgium
| | - Benoist Pruvot
- GIGA-Development, Stem Cells and Regenerative Medicine, Organogenesis and Regeneration, University of Liège, Liège, Belgium
| | - Olivier Stern
- GIGA-Systems Biology and Chemical Biology, Dept. EE & CS, University of Liège, Liège, Belgium
| | - Pierre Geurts
- GIGA-Systems Biology and Chemical Biology, Dept. EE & CS, University of Liège, Liège, Belgium
| | - Louis Wehenkel
- GIGA-Systems Biology and Chemical Biology, Dept. EE & CS, University of Liège, Liège, Belgium
- GIGA Bioinformatics Core Facility, University of Liège, Liège, Belgium
| | - Marc Muller
- GIGA-Development, Stem Cells and Regenerative Medicine, Organogenesis and Regeneration, University of Liège, Liège, Belgium
- * E-mail:
| |
Collapse
|
3
|
Hsu PY, Lee KK, Hu CC, Liu PC. Purification and characterization of a phospholipase byPhotobacterium damselaesubsp.piscicidafrom cobiaRachycentron canadum. J Basic Microbiol 2013; 54:969-75. [DOI: 10.1002/jobm.201200764] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2012] [Accepted: 05/18/2013] [Indexed: 11/07/2022]
Affiliation(s)
- Po-Yuan Hsu
- Department of Aquaculture; National Taiwan Ocean University; Keelung Taiwan
| | - Kuo-Kau Lee
- Department of Aquaculture; National Taiwan Ocean University; Keelung Taiwan
| | - Chih-Chuang Hu
- Department of Aquaculture; National Taiwan Ocean University; Keelung Taiwan
| | - Ping-Chung Liu
- Department of Aquaculture; National Taiwan Ocean University; Keelung Taiwan
| |
Collapse
|
4
|
Flohr L, Fuzinatto CF, Melegari SP, Matias WG. Effects of exposure to soluble fraction of industrial solid waste on lipid peroxidation and DNA methylation in erythrocytes of Oreochromis niloticus, as assessed by quantification of MDA and m⁵dC rates. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2012; 76:63-70. [PMID: 22047768 DOI: 10.1016/j.ecoenv.2011.10.016] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2011] [Revised: 10/04/2011] [Accepted: 10/12/2011] [Indexed: 05/31/2023]
Abstract
In this study, lipid peroxidation and DNA methylation were observed in erythrocytes of Oreochromis niloticus exposed to soluble fractions of textile, metal-mechanic and pulp and paper industrial waste, after a period of 48 h. Lipid peroxidation was quantified by the rate of malondialdehyde (MDA) and DNA methylation was quantified by the rate of 5-methyldeoxycytosine (m⁵dC). Soluble fractions of textile industrial waste caused metabolic changes for all studied samples. In organisms exposed to samples TX1 and TX2 (textile waste) MDA rates were 132.36 and 140.28 nM MDA/mg protein, respectively, while in control organism the MDA rates were 27.5 nM MDA/mg protein. All samples from soluble fractions of textile industrial waste induced increases in m⁵dC rates, increases varied between 300 percent and 700 percent when compared to the control organism. All the organisms exposed to soluble fractions of metal-mechanic industrial waste presented increases between 360 percent and 600 percent in the rates of MDA, and one of them (sample MM3) induced an increase of 180 percent in the rate of m⁵dC, when compared to control. Although a significant increase was not observed in the MDA rate of fish exposed to the soluble fractions of pulp and paper industrial waste, there was an increase of 460 percent in the rate of m⁵dC in one of the samples (sample PP2), when compared to control. The results showed that the soluble fractions of these industrial wastes are capable of inducing oxidative damage and altering the DNA methylation of O. niloticus. Thus, the MDA and m⁵dC rates demonstrated to be effective biomarkers of exposure, which could be used to evaluate the toxicity of soluble fractions of industrial solid waste.
Collapse
Affiliation(s)
- Letícia Flohr
- Laboratório de Toxicologia Ambiental, LABTOX, Depto. de Engenharia Sanitária e Ambiental, Universidade Federal de Santa Catarina, Campus Universitário, CEP: 88040-970, Caixa Postal 476, Florianópolis, SC, Brasil
| | | | | | | |
Collapse
|
5
|
Yuan Y, Zhu Z, Shi J, Zou Z, Yuan F, Liu Y, Lee TMC, Weng X. Gray matter density negatively correlates with duration of heroin use in young lifetime heroin-dependent individuals. Brain Cogn 2009; 71:223-8. [PMID: 19775795 DOI: 10.1016/j.bandc.2009.08.014] [Citation(s) in RCA: 98] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2009] [Revised: 08/22/2009] [Accepted: 08/26/2009] [Indexed: 10/20/2022]
Abstract
Numerous studies have documented cognitive impairments and hypoactivity in the prefrontal and anterior cingulate cortices in drug users. However, the relationships between opiate dependence and brain structure changes in heroin users are largely unknown. In the present study, we measured the density of gray matter (DGM) with voxel-based morphometry in 30 lifetime heroin-dependent individuals who had abstained from drug use for 5 months, and 34 healthy participants. The DGM of the prefrontal, temporal and cingulate cortices significantly decreased in heroin addicts relative to the healthy group. Critically, partial correlation analysis, which controlled for age, education and gender factors as well as nicotine use and heroin abstinence duration, showed that the duration of heroin use negatively correlated with the DGM in heroin-dependent individuals. These results provide compelling evidence for structural abnormality in heroin-dependent individuals and further suggest that duration of heroin use is a critical factor leading to brain damage.
Collapse
Affiliation(s)
- Yi Yuan
- Laboratory for Higher Brain Function, Institute of Psychology, The Chinese Academy of Sciences, Beijing 100101, China
| | | | | | | | | | | | | | | |
Collapse
|
6
|
Yang JG, Yu HN, Sun SL, Zhang LC, He GQ, Das UN, Ruan H, Shen SR. Epigallocatechin-3-gallate affects the growth of LNCaP cells via membrane fluidity and distribution of cellular zinc. J Zhejiang Univ Sci B 2009; 10:411-21. [PMID: 19489106 DOI: 10.1631/jzus.b0820400] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
OBJECTIVE To evaluate effects of epigallocatechin-3-gallate (EGCG) on the viability, membrane properties, and zinc distribution, with and without the presence of Zn(2+), in human prostate carcinoma LNCaP cells. METHODS We examined changes in cellular morphology and membrane fluidity of LNCaP cells, distribution of cellular zinc, and the incorporated portion of EGCG after treatments with EGCG, Zn(2+), and EGCG+Zn(2+). RESULTS We observed an alteration in cellular morphology and a decrease in membrane fluidity of LNCaP cells after treatment with EGCG or Zn(2+). The proportion of EGCG incorporated into liposomes treated with the mixture of EGCG and Zn(2+) at the ratio of 1:1 was 90.57%, which was significantly higher than that treated with EGCG alone (30.33%). Electron spin resonance (ESR) studies and determination of fatty acids showed that the effects of EGCG on the membrane fluidity of LNCaP were decreased by Zn(2+). EGCG accelerated the accumulation of zinc in the mitochondria and cytosol as observed by atomic absorption spectrometer. CONCLUSION These results show that EGCG interacted with cell membrane, decreased the membrane fluidity of LNCaP cells, and accelerated zinc accumulation in the mitochondria and cytosol, which could be the mechanism by which EGCG inhibits proliferation of LNCaP cells. In addition, high concentrations of Zn(2+) could attenuate the actions elicited by EGCG.
Collapse
Affiliation(s)
- Jun-guo Yang
- Department of Food Science and Nutrition, Zhejiang University, Hangzhou 310029, China
| | | | | | | | | | | | | | | |
Collapse
|
7
|
The EVER proteins as a natural barrier against papillomaviruses: a new insight into the pathogenesis of human papillomavirus infections. Microbiol Mol Biol Rev 2009; 73:348-70. [PMID: 19487731 DOI: 10.1128/mmbr.00033-08] [Citation(s) in RCA: 102] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
Infections by human papillomaviruses (HPVs) are the most frequently occurring sexually transmitted diseases. The crucial role of genital oncogenic HPV in cervical carcinoma development is now well established. In contrast, the role of cutaneous HPV in skin cancer development remains a matter of debate. Cutaneous beta-HPV strains show an amazing ubiquity. The fact that a few oncogenic genotypes cause cancers in patients suffering from epidermodysplasia verruciformis is in sharp contrast to the unapparent course of infection in the general population. Our recent investigations revealed that a natural barrier exists in humans, which protects them against infection with these papillomaviruses. A central role in the function of this HPV-specific barrier is played by a complex of the zinc-transporting proteins EVER1, EVER2, and ZnT-1, which maintain cellular zinc homeostasis. Apparently, the deregulation of the cellular zinc balance emerges as an important step in the life cycles not only of cutaneous but also of genital HPVs, although the latter viruses have developed a mechanism by which they can break the barrier and impose a zinc imbalance. Herein, we present a previously unpublished list of the cellular partners of EVER proteins, which points to future directions concerning investigations of the mechanisms of action of the EVER/ZnT-1 complex. We also present a general overview of the pathogenesis of HPV infections, taking into account the latest discoveries regarding the role of cellular zinc homeostasis in the HPV life cycle. We propose a potential model for the mechanism of function of the anti-HPV barrier.
Collapse
|
8
|
Structural effects of Zn2+ on cell membranes and molecular models. J Inorg Biochem 2009; 103:797-804. [DOI: 10.1016/j.jinorgbio.2009.02.009] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2008] [Revised: 01/13/2009] [Accepted: 02/06/2009] [Indexed: 11/22/2022]
|
9
|
Tubek S, Grzanka P, Tubek I. The role of zinc in thrombosis and pulmonary embolism in the course of antiphospholipid syndrome (APS)--short review. Biol Trace Elem Res 2008; 122:193-6. [PMID: 18172583 DOI: 10.1007/s12011-007-8077-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/09/2007] [Accepted: 11/27/2007] [Indexed: 01/20/2023]
Abstract
Antiphospholipid antibodies may occur in the course of various diseases, but its presence is not necessarily associated with clinical symptoms. Zinc has multiple biological roles. For example, it stabilizes the cell's membrane and regulates its functions by influencing the synthesis of phospholipids and its distribution. The present review focuses on the possible associations between zinc and antiphospholipid antibodies and with the symptoms of antiphospholipid syndrome.
Collapse
Affiliation(s)
- Sławomir Tubek
- Faculty of Physical Education and Physiotherapy, Institute of Technology, Prószkowska Street 76, 45-758, Opole, Poland.
| | | | | |
Collapse
|
10
|
Naka H, Hirono I, Aoki T. Cloning and characterization of Photobacterium damselae ssp. piscicida phospholipase: an enzyme that shows haemolytic activity. JOURNAL OF FISH DISEASES 2007; 30:681-690. [PMID: 17958612 DOI: 10.1111/j.1365-2761.2007.00861.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
A phospholipase gene of Photobacterium damselae ssp. piscicida (ppp) was cloned from a genomic library and its nucleotide sequence was determined. The open reading frame consisted of 1218 bp encoding a protein of 405 amino acids with a predicted molecular mass of 46 kDa. The PPP had identities (53-55%) with phospholipase and haemolysin of Vibrio spp., while it showed low identities (23-26%) with glycerophospholipid cholesterol acyltransferase of Aeromonas spp. A recombinant PPP (rPPP) with a His tag at the C-terminus expressed in Escherichia coli and purified showed phospholipase activity. The rPPP also showed lecithin-dependent haemolytic activity against mammalian erythrocytes and direct haemolytic activity against fish erythrocytes. The culture supernatant of wild-type P. damselae ssp. piscicida showed phospholipase activity, while that of a PPP gene knockout mutant did not.
Collapse
Affiliation(s)
- H Naka
- Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, Tokyo, Japan
| | | | | |
Collapse
|
11
|
Garcia JJ, Martínez-Ballarín E, Millán-Plano S, Allué JL, Albendea C, Fuentes L, Escanero JF. Effects of trace elements on membrane fluidity. J Trace Elem Med Biol 2005; 19:19-22. [PMID: 16240667 DOI: 10.1016/j.jtemb.2005.07.007] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
According to the Fluid Mosaic Model, a biological membrane is a two-dimensional fluid of oriented proteins and lipids. The lipid bilayer is the basic structure of all cell and organelle membranes. Cell membranes are dynamic, fluid structures, and most of their molecules are able to move in the plane of the membrane. Fluidity is the quality of ease of movement and represents the reciprocal value of membrane viscosity. Fluid properties of biological membranes are essential for numerous cell functions. Even slight changes in membrane fluidity may cause aberrant function and pathological processes. Several evidences suggest that trace elements, e.g., iron, copper, zinc, selenium, chromium, cadmium, mercury and lead may influence membrane fluidity. The interaction of heavy metals with cellular membranes may contribute to explain, at least partially, the toxicity associated with these metals.
Collapse
Affiliation(s)
- José Joaquín Garcia
- Department of Pharmacology and Physiology, University of Zaragoza, C) Domingo Miral sln, 50009 Zaragoza, Spain.
| | | | | | | | | | | | | |
Collapse
|
12
|
Lee JH, Ahn SH, Kim SH, Choi YH, Park KJ, Kong IS. Characterization of Vibrio mimicus phospholipase A (PhlA) and cytotoxicity on fish cell. Biochem Biophys Res Commun 2002; 298:269-76. [PMID: 12387827 DOI: 10.1016/s0006-291x(02)02434-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Vibrio mimicus is a typical strain of Vibrio cholerae and produces a phospholipase (PhlA) which shares a highly conserved amino acid sequence with the lecithinase (Lec) of V. cholerae. The recombinant protein (rPhlA) produced from the phlA gene of V. mimicus was expressed in Escherichia coli as His-tag fused protein. The rPhlA was purified by gel filtration and Ni-metal affinity chromatographies. When the action mode was investigated by TLC and GC-MS, the purified rPhlA protein showed a phospholipase A activity, which cleaved the fatty acids at the sn-1 and sn-2 positions of phosphatidylcholine. However, it did not show lysophospholipase, sphingomyelinase, and phospholipase C activities. The rPhlA showed maximum activity at temperature of about 40 degrees C and pH around 8-9. Some divalent cations could affect the activity of PhlA. The addition of Co(2+) increased the activity, whereas Mg(2+) and Zn(2+) did not enhance the enzyme activity. The rPhlA could lyse the erythrocytes obtained from the fish such as rainbow trout and tilapia. A significant cytotoxic activity on a fish cell line, CHSE-214, was observed after 24h exposure to 40 microg rPhlA protein.
Collapse
Affiliation(s)
- Jong-Hee Lee
- Department of Biotechnology and Bioengineering, Pukyong National University, Busan 608-737, Republic of Korea
| | | | | | | | | | | |
Collapse
|