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Di Berto Mancini M, de Roo CM, Sardjan AS, Hage R, Olivo G, Lanzalunga O, Swart M, Browne WR. A Transient, Highly Reactive Fe(IV)=O Species Revealed Through the Interference by O 2 in the Activation of Organic Peracids by [(N4Py)Fe(II)] 2. ACS Catal 2025; 15:7482-7495. [PMID: 40337369 PMCID: PMC12054616 DOI: 10.1021/acscatal.5c00706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2025] [Revised: 04/02/2025] [Accepted: 04/03/2025] [Indexed: 05/09/2025]
Abstract
Biomimetic models of high-valent species relevant to those formed by the activation of O2 by nonheme iron enzymes are essential for understanding reactivity. In synthetic complexes, oxidants such as peroxides and peroxyacids rather than O2, are used to generate these species. However, although O2 is not the terminal oxidant in these models, its presence in reaction mixtures can negatively impact the outcome of catalytic reactions. In this report, the origin of this impact is elucidated using the reaction of the nonheme iron complex [(N4Py)Fe(II)(CH3CN)]2+ (1, N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) with phenyl peracetic acid. We show that the speciation of the catalyst is sensitive to changes in composition by monitoring reaction progress using multiple operando spectroscopic techniques (UV/vis, Raman, FTIR, luminescence spectroscopy) concurrently to track changes in concentrations of the iron complexes, organic compounds, and gases. We elucidate the fundamental role played by molecular oxygen in the observed progress of the reactions, affecting the product distribution as expected, but also driving the system toward the accumulation of Fe(IV)=O species by scavenging intermediate benzyl radicals. These reactions influence the operation of a Fe(II)/Fe(IV) catalytic cycle with the peracid. An unexpected outcome of the study is that the data strongly indicate the transient formation of a highly reactive iron species capable of oxidizing organic substrates (e.g., methanol to methanal) within the solvent cage. We show that it is this species that enables an Fe(II)/Fe(IV) catalytic cycle. These findings shed light on differences in the catalytic performance of biomimetic nonheme iron complexes compared to the enzymes that inspire them.
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Affiliation(s)
- Marika Di Berto Mancini
- Stratingh
Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, Groningen 9474AG, Netherlands
| | - C. Maurits de Roo
- Stratingh
Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, Groningen 9474AG, Netherlands
| | - Andy S. Sardjan
- Stratingh
Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, Groningen 9474AG, Netherlands
| | - Ronald Hage
- Stratingh
Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, Groningen 9474AG, Netherlands
| | - Giorgio Olivo
- Dipartimento
di Chimica and Istituto CNR per i Sistemi Biologici (ISB-CNR), Università di Roma “La Sapienza”, P.le A. Moro, 5, Rome I-00185, Italy
| | - Osvaldo Lanzalunga
- Dipartimento
di Chimica and Istituto CNR per i Sistemi Biologici (ISB-CNR), Università di Roma “La Sapienza”, P.le A. Moro, 5, Rome I-00185, Italy
| | - Marcel Swart
- IQCC
and Department of Chemistry, Universitat
de Girona, ParcUdG, c/Emili
Grahit 91, Girona 17003, Spain
- ICREA, Pg. Lluís Companys 23, Barcelona 08010, Spain
| | - Wesley R. Browne
- Stratingh
Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 3, Groningen 9474AG, Netherlands
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2
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Uyeda KS, Follmer AH, Borovik AS. Selective oxidation of active site aromatic residues in engineered Cu proteins. Chem Sci 2024; 16:98-103. [PMID: 39600509 PMCID: PMC11587884 DOI: 10.1039/d4sc06667g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2024] [Accepted: 11/16/2024] [Indexed: 11/29/2024] Open
Abstract
Recent studies have revealed critical roles for the local environments surrounding metallocofactors, such as the newly identified CuD site in particulate methane monooxygenases (pMMOs) and the second sphere aromatic residues in lytic polysaccharide monooxygenases (LPMOs), implicated in the protection against oxidative damage. However, these features are subjects of continued debate. Our work utilizes biotin-streptavidin (Sav) technology to develop artificial metalloproteins (ArMs) that mimic the active sites of natural copper metalloenzymes. By engineering ArMs with aromatic residues within their secondary coordination spheres, we systematically investigate the influence of these residues on Cu reactivity and oxidant activation. We demonstrate that the placement and orientation of tyrosine relative to the Cu cofactor critically affect the oxidation outcomes upon exposure to hydrogen peroxide. A key finding is the interplay between the coordination of an active site asparagine and the incorporation of aromatic residues proximal to the artificial Cu cofactor, which are the only variants where oxidation of an engineered residues is observed. These findings underscore the importance of the secondary coordination sphere in modulating Cu center reactivity, suggest a role for amide coordination in C-H bond activation by pMMOs, and potential inactivation pathways in natural copper enzymes like LPMOs.
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Affiliation(s)
- Kylie S Uyeda
- Department of Chemistry, University of California-Irvine Irvine CA 92697 USA
| | - Alec H Follmer
- Department of Chemistry, University of California-Irvine Irvine CA 92697 USA
| | - A S Borovik
- Department of Chemistry, University of California-Irvine Irvine CA 92697 USA
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3
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Jana RD, Das A, Samanta R, Banerjee S, Paul S, Paine TK. Stereoelectronic Tuning of Bioinspired Nonheme Iron(IV)-Oxo Species by Amide Groups in Primary and Secondary Coordination Spheres for Selective Oxygenation Reactions. Inorg Chem 2024; 63:21042-21058. [PMID: 39433290 DOI: 10.1021/acs.inorgchem.4c03155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2024]
Abstract
Two mononuclear iron(II) complexes, [(6-amide2-BPMEN)FeII](OTf)2 (1) and [(6-amide-Me-BPMEN)FeII(OTf)](OTf) (2), supported by two BPMEN-derived (BPMEN = N1,N2-dimethyl-N1,N2-bis(pyridine-2-yl-methyl)ethane-1,2-diamine) ligands bearing one or two amide functionalities have been isolated to study their reactivity in the oxygenation of C-H and C═C bonds using isopropyl 2-iodoxybenzoate (iPr-IBX ester) as the oxidant. Both 1 and 2 contain six-coordinate high-spin iron(II) centers in the solid state and in solution. The 6-amide2-BPMEN ligand stabilizes an S = 1 iron(IV)-oxo intermediate, [(6-amide2-BPMEN)FeIV(O)]2+ (1A). The oxidant (1A) oxygenates the C-H and C═C bonds with a high selectivity. Oxidant 1A, upon treatment with 2,6-lutidine, is transformed into another oxidant [{(6-amide2-BPMEN)-(H)}FeIV(O)]+ (1B) through deprotonation of an amide group, resulting in a stronger equatorial ligand field and subsequent stabilization of the triplet ground state. In contrast, no iron-oxo species could be observed from complex 2 and [(6-Me2-BPMEN)FeII(OTf)2] (3) under similar experimental conditions. The iron(IV)-oxo oxidant 1A shows the highest A/K selectivity in cyclohexane oxidation and 3°/2° selectivity in adamantane oxidation reported for any synthetic nonheme iron(IV)-oxo complexes. Theoretical investigation reveals that the hydrogen bonding interaction between the -NH group of the noncoordinating amide group and Fe═O core smears out the equatorial charge density, reducing the triplet-quintet splitting, and thus helping complex 1A to achieve better reactivity.
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Affiliation(s)
- Rahul Dev Jana
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata, Jadavpur 700032, India
| | - Abhishek Das
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata, Jadavpur 700032, India
| | - Rajib Samanta
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata, Jadavpur 700032, India
| | - Sridhar Banerjee
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata, Jadavpur 700032, India
| | - Satadal Paul
- Department of Chemistry, Bangabasi Morning College, 19 Rajkumar Chakraborty Sarani, Kolkata 700009, India
| | - Tapan Kanti Paine
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata, Jadavpur 700032, India
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Katoch A, Mandal D. Impact of carboxylate ligation on the C-H activation reactivity of a non-heme Fe(IV)O complex: a computational investigation. Dalton Trans 2024; 53:15264-15272. [PMID: 39222036 DOI: 10.1039/d4dt02139h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
Abstract
A comprehensive DFT investigation has been presented to predict how a carboxylate-rich macrocycle would affect the reactivity of a non-heme Fe(IV)O complex towards C-H activation. The popular non-heme iron oxo complex [FeIV(O)(N4Py)]2+, (N4Py = N,N-(bis(2-pyridyl)methyl)N-bis(2-pyridylmethyl)amine) (1), has been selected here as the primary compound. It is transformed to the compound [FeIV(O)(nBu-P2DA)], where nBu-P2DA = N-(1',1'-bis(2-pyridyl)pentyl)iminodiacetate (2) after the replacement of two pyridine donors of N4Py with carboxylate groups. Two other complexes, namely 3 and 4, have been predicted sequentially substituting nitrogen with the carboxylate groups. Ethylbenzene and dihydrotoluene were chosen as substrates. In terms of C-H activation reactivity, an interesting pattern emerges: as the carboxylate group becomes more equatorially enriched, the reactivity increases, following the trend 1 < 2 < 3 < 4. This also aligns with available experimental reports related to complexes 1 and 2. Fe(IV)O complexes exhibit two-state reactivity (triplet and quintet), whereas the quintet state is more favourable due to the stabilization of the transition states through exchange interactions involving a greater number of unpaired electrons. A detailed analysis of the factors influencing reactivity has been performed, including distortion energy (which decreases for the transition state with the addition of carboxylate groups), the triplet-quintet oxidant energy gap (which consistently decreases as carboxylate group enrichment increases), steric factors, and quantum mechanical tunneling. This investigation provides a detailed explanation of the observed outcomes and predicts the higher reactivity of carboxylate-enriched Fe(IV)O complexes. After potential experimental verification, this could lead to the development of new, optimal catalysts for C-H activation.
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Affiliation(s)
- Akanksha Katoch
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala-147001, Punjab, India.
| | - Debasish Mandal
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala-147001, Punjab, India.
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Warm K, Kass D, Haumann M, Dau H, Ray K. Modelling the coordination environment in α‐ketoglutarate dependent oxygenases – a comparative study on the effect of N‐ vs. O‐ligation. Z Anorg Allg Chem 2022. [DOI: 10.1002/zaac.202100310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Katrin Warm
- Institut für Chemie Humboldt-Universität zu Berlin Brook-Taylor-Str. 2 12489 Berlin Germany
| | - Dustin Kass
- Institut für Chemie Humboldt-Universität zu Berlin Brook-Taylor-Str. 2 12489 Berlin Germany
| | - Michael Haumann
- Institut für Physik Freie Universität Berlin Arnimallee 14 14195 Berlin Germany
| | - Holger Dau
- Institut für Physik Freie Universität Berlin Arnimallee 14 14195 Berlin Germany
| | - Kallol Ray
- Institut für Chemie Humboldt-Universität zu Berlin Brook-Taylor-Str. 2 12489 Berlin Germany
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6
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Fukuzumi S, Lee Y, Nam W. Deuterium kinetic isotope effects as redox mechanistic criterions. B KOREAN CHEM SOC 2021. [DOI: 10.1002/bkcs.12417] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul Korea
- Faculty of Science and Engineering Meijo University Nagoya Aichi Japan
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul Korea
- Research Institute for Basic Sciences Ewha Womans University Seoul Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul Korea
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7
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McPherson JN, Miller CJ, Wegeberg C, Chang Y, Hedegård ED, Bill E, Waite TD, McKenzie CJ. Cooperative Co-Activation of Water and Hypochlorite by a Non-Heme Diiron(III) Complex. J Am Chem Soc 2021; 143:15400-15412. [PMID: 34491045 DOI: 10.1021/jacs.1c07669] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Aqueous solutions of the iron(III) complex of N,N,N'-tris(2-pyridylmethyl)ethylenediamine-N'-acetate (tpena) react with hypochlorite (ClO-) to produce the reactive high-valent [FeIV(O)(tpena)]+. Under catalytic conditions, in bicarbonate-buffered media (pH 8) with a set ionic strength (10 mM NaCl), kinetic analysis shows that two equivalents of [FeIV(O)(tpena)]+ per one ClO- are produced, with benign chloride ions the only byproduct. An unprecedented supramolecular activation of ClO- by {(HCO3)⊂[(tpena)FeIII(μ-O)FeIII(Htpena)]}2+ is proposed. This mode of activation has great advantage for use in the catalytic oxidation of C-H bonds in water since: (i) the catalyst scaffold is protected from oxidative degradation and (ii) undesirable radical side reactions which produce toxic chlorinated compounds are circumvented by this novel coactivation of water and ClO-. The unique activation mechanism by the Fe-tpena system makes possible the destruction of organic contaminants as an add-on technology to water disinfection by chlorination, demonstrated here through (i) the catalytic oxidation of micropollutant metaldehyde, and (ii) mineralization of the model substrate formate. The resting-state speciation at pH 3, 5, 7, and 9, as well as the catalytically active iron speciation are characterized with Mössbauer and EPR spectroscopy and supported by DFT calculations. Our study provides fundamentally new insights into the design and activation mode of iron-based catalysts relevant to applications in water remediation.
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Affiliation(s)
- James N McPherson
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5320 Odense M, Denmark
| | - Christopher J Miller
- Water Research Centre, School of Civil and Environmental Engineering, University of New South Wales, Sydney, NSW 2052, Australia
| | - Christina Wegeberg
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5320 Odense M, Denmark
| | - Yingyue Chang
- Water Research Centre, School of Civil and Environmental Engineering, University of New South Wales, Sydney, NSW 2052, Australia
| | - Erik Donovan Hedegård
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5320 Odense M, Denmark
| | - Eckhard Bill
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, 45470 Mülheim an der Ruhr, Germany
| | - T David Waite
- Water Research Centre, School of Civil and Environmental Engineering, University of New South Wales, Sydney, NSW 2052, Australia
| | - Christine J McKenzie
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5320 Odense M, Denmark
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8
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Lee JL, Ross DL, Barman SK, Ziller JW, Borovik AS. C-H Bond Cleavage by Bioinspired Nonheme Metal Complexes. Inorg Chem 2021; 60:13759-13783. [PMID: 34491738 DOI: 10.1021/acs.inorgchem.1c01754] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The functionalization of C-H bonds is one of the most challenging transformations in synthetic chemistry. In biology, these processes are well-known and are achieved with a variety of metalloenzymes, many of which contain a single metal center within their active sites. The most well studied are those with Fe centers, and the emerging experimental data show that high-valent iron oxido species are the intermediates responsible for cleaving the C-H bond. This Forum Article describes the state of this field with an emphasis on nonheme Fe enzymes and current experimental results that provide insights into the properties that make these species capable of C-H bond cleavage. These parameters are also briefly considered in regard to manganese oxido complexes and Cu-containing metalloenzymes. Synthetic iron oxido complexes are discussed to highlight their utility as spectroscopic and mechanistic probes and reagents for C-H bond functionalization. Avenues for future research are also examined.
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Affiliation(s)
- Justin L Lee
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
| | - Dolores L Ross
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
| | - Suman K Barman
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
| | - Joseph W Ziller
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
| | - A S Borovik
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
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9
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Mukherjee G, Satpathy JK, Bagha UK, Mubarak MQE, Sastri CV, de Visser SP. Inspiration from Nature: Influence of Engineered Ligand Scaffolds and Auxiliary Factors on the Reactivity of Biomimetic Oxidants. ACS Catal 2021. [DOI: 10.1021/acscatal.1c01993] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Gourab Mukherjee
- Department of Chemistry, Indian Institute of Technology Guwahati, 781039, Assam, India
| | - Jagnyesh K. Satpathy
- Department of Chemistry, Indian Institute of Technology Guwahati, 781039, Assam, India
| | - Umesh K. Bagha
- Department of Chemistry, Indian Institute of Technology Guwahati, 781039, Assam, India
| | - M. Qadri E. Mubarak
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Fakulti Sains dan Teknologi, Universiti Sains Islam Malaysia, Bandar Baru Nilai, 71800 Nilai, Negeri Sembilan Malaysia
| | - Chivukula V. Sastri
- Department of Chemistry, Indian Institute of Technology Guwahati, 781039, Assam, India
| | - Sam P. de Visser
- Department of Chemistry, Indian Institute of Technology Guwahati, 781039, Assam, India
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department of Chemical Engineering and Analytical Science, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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