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Holzinger R, Bassler NS, Ritsch H, Genes C. Scaling Law for Kasha's Rule in Photoexcited Molecular Aggregates. J Phys Chem A 2024; 128:3910-3915. [PMID: 38568185 PMCID: PMC11103697 DOI: 10.1021/acs.jpca.4c00342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Revised: 03/08/2024] [Accepted: 03/19/2024] [Indexed: 05/22/2024]
Abstract
We study the photophysics of molecular aggregates from a quantum optics perspective, with emphasis on deriving scaling laws for the fast nonradiative relaxation of collective electronic excitations, referred to as Kasha's rule. Aggregates exhibit an energetically broad manifold of collective states with delocalized electronic excitations originating from near-field dipole-dipole exchanges between neighboring monomers. Photoexcitation at optical wavelengths, much larger than the monomer-monomer average separation, addresses almost exclusively symmetric collective states, which for an arrangement known as H-aggregate show an upward hypsochromic shift. The extremely fast subsequent nonradiative relaxation via intramolecular vibrational modes populates lower energy, subradiant states, resulting in effective inhibition of fluorescence. Our analytical treatment allows for the derivation of an approximate scaling law of this relaxation process, linear in the number of available low-energy vibrational modes and directly proportional to the dipole-dipole interaction strength between neighboring monomers.
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Affiliation(s)
- Raphael Holzinger
- Institute
for Theoretical Physics, Innsbruck University, Technikerstraße 21a, 6020 Innsbruck, Austria
| | - Nico S. Bassler
- Max
Planck Institute for the Science of Light, Staudtstraße 2, D-91058 Erlangen, Germany
| | - Helmut Ritsch
- Institute
for Theoretical Physics, Innsbruck University, Technikerstraße 21a, 6020 Innsbruck, Austria
| | - Claudiu Genes
- Max
Planck Institute for the Science of Light, Staudtstraße 2, D-91058 Erlangen, Germany
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2
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Rode AJ, Arpin PC, Turner DB. Theoretical model of femtosecond coherence spectroscopy of vibronic excitons in molecular aggregates. J Chem Phys 2024; 160:164101. [PMID: 38647298 DOI: 10.1063/5.0200570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2024] [Accepted: 04/03/2024] [Indexed: 04/25/2024] Open
Abstract
When used as pump pulses in transient absorption spectroscopy measurements, femtosecond laser pulses can produce oscillatory signals known as quantum beats. The quantum beats arise from coherent superpositions of the states of the sample and are best studied in the Fourier domain using Femtosecond Coherence Spectroscopy (FCS), which consists of one-dimensional amplitude and phase plots of a specified oscillation frequency as a function of the detection frequency. Prior works have shown ubiquitous amplitude nodes and π phase shifts in FCS from excited-state vibrational wavepackets in monomer samples. However, the FCS arising from vibronic-exciton states in molecular aggregates have not been studied theoretically. Here, we use a model of vibronic-exciton states in molecular dimers based on displaced harmonic oscillators to simulate FCS for dimers in two important cases. Simulations reveal distinct spectral signatures of excited-state vibronic-exciton coherences in molecular dimers that may be used to distinguish them from monomer vibrational coherences. A salient result is that, for certain relative orientations of the transition dipoles, the key resonance condition between the electronic coupling and the frequency of the vibrational mode may yield strong enhancement of the quantum-beat amplitude and, perhaps, also cause a significant decrease of the oscillation frequency to a value far lower than the vibrational frequency. Future studies using these results will lead to new insights into the excited-state coherences generated in photosynthetic pigment-protein complexes.
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Affiliation(s)
- Alexander J Rode
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Paul C Arpin
- Department of Physics, California State University, Chico, Chico, California 95929, USA
| | - Daniel B Turner
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
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3
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Lorenzoni N, Cho N, Lim J, Tamascelli D, Huelga SF, Plenio MB. Systematic Coarse Graining of Environments for the Nonperturbative Simulation of Open Quantum Systems. PHYSICAL REVIEW LETTERS 2024; 132:100403. [PMID: 38518302 DOI: 10.1103/physrevlett.132.100403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 01/22/2024] [Accepted: 02/13/2024] [Indexed: 03/24/2024]
Abstract
Conducting precise electronic-vibrational dynamics simulations of molecular systems poses significant challenges when dealing with realistic environments composed of numerous vibrational modes. Here, we introduce a technique for the construction of effective phonon spectral densities that capture accurately open-system dynamics over a finite time interval of interest. When combined with existing nonperturbative simulation tools, our approach can reduce significantly the computational costs associated with many-body open-system dynamics.
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Affiliation(s)
- Nicola Lorenzoni
- Institut für Theoretische Physik und IQST, Albert-Einstein-Allee 11, Universität Ulm, D-89081 Ulm, Germany
| | - Namgee Cho
- Institut für Theoretische Physik und IQST, Albert-Einstein-Allee 11, Universität Ulm, D-89081 Ulm, Germany
| | - James Lim
- Institut für Theoretische Physik und IQST, Albert-Einstein-Allee 11, Universität Ulm, D-89081 Ulm, Germany
| | - Dario Tamascelli
- Institut für Theoretische Physik und IQST, Albert-Einstein-Allee 11, Universität Ulm, D-89081 Ulm, Germany
- Dipartimento di Fisica "Aldo Pontremoli," Università degli Studi di Milano, Via Celoria 16, 20133 Milano, Italy
| | - Susana F Huelga
- Institut für Theoretische Physik und IQST, Albert-Einstein-Allee 11, Universität Ulm, D-89081 Ulm, Germany
| | - Martin B Plenio
- Institut für Theoretische Physik und IQST, Albert-Einstein-Allee 11, Universität Ulm, D-89081 Ulm, Germany
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4
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Kim J, Lee HS, Kim CH. Observation of Coherent Symmetry-Breaking Vibration by Polarization-Dependent Femtosecond Spectroscopy. J Phys Chem B 2024; 128:1053-1060. [PMID: 38253009 DOI: 10.1021/acs.jpcb.3c08151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
Understanding photoinduced chemical reactions beyond the Born-Oppenheimer paradigm requires a comprehensive examination of vibronic interactions. Although femtosecond studies have unveiled the influence of vibrational modes strongly coupled to ultrafast intramolecular reactions in the excited state, they often lack direct observations of how vibrations modulate electronic properties due to the rapid disappearance of reactants. To address this gap, our research investigates the dynamics of photoexcited molecules that do not react. Specifically, we focus on the coherent librational motion of molecular transition dipole moments, discovering that the coherent libration primarily originates from symmetry-breaking components in vibronically excited vibrational modes. Symmetry breaking motion can significantly impact the excited-state dynamics of highly symmetric molecules, potentially leading to nonadiabatic transitions. In essence, the data analysis framework introduced in this study can be harnessed to uncover potential reactivity in photoexcited molecules, further enhancing our understanding of the mechanisms governing these reactions.
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Affiliation(s)
- JunWoo Kim
- Department of Chemistry, Chungbuk National University, Cheongju 28644, Republic of Korea
| | - Hyun Seok Lee
- Department of Advanced Materials Chemistry, Korea University, Sejong 30019, Republic of Korea
| | - Chul Hoon Kim
- Department of Advanced Materials Chemistry, Korea University, Sejong 30019, Republic of Korea
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5
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Mathur D, Díaz SA, Hildebrandt N, Pensack RD, Yurke B, Biaggne A, Li L, Melinger JS, Ancona MG, Knowlton WB, Medintz IL. Pursuing excitonic energy transfer with programmable DNA-based optical breadboards. Chem Soc Rev 2023; 52:7848-7948. [PMID: 37872857 PMCID: PMC10642627 DOI: 10.1039/d0cs00936a] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Indexed: 10/25/2023]
Abstract
DNA nanotechnology has now enabled the self-assembly of almost any prescribed 3-dimensional nanoscale structure in large numbers and with high fidelity. These structures are also amenable to site-specific modification with a variety of small molecules ranging from drugs to reporter dyes. Beyond obvious application in biotechnology, such DNA structures are being pursued as programmable nanoscale optical breadboards where multiple different/identical fluorophores can be positioned with sub-nanometer resolution in a manner designed to allow them to engage in multistep excitonic energy-transfer (ET) via Förster resonance energy transfer (FRET) or other related processes. Not only is the ability to create such complex optical structures unique, more importantly, the ability to rapidly redesign and prototype almost all structural and optical analogues in a massively parallel format allows for deep insight into the underlying photophysical processes. Dynamic DNA structures further provide the unparalleled capability to reconfigure a DNA scaffold on the fly in situ and thus switch between ET pathways within a given assembly, actively change its properties, and even repeatedly toggle between two states such as on/off. Here, we review progress in developing these composite materials for potential applications that include artificial light harvesting, smart sensors, nanoactuators, optical barcoding, bioprobes, cryptography, computing, charge conversion, and theranostics to even new forms of optical data storage. Along with an introduction into the DNA scaffolding itself, the diverse fluorophores utilized in these structures, their incorporation chemistry, and the photophysical processes they are designed to exploit, we highlight the evolution of DNA architectures implemented in the pursuit of increased transfer efficiency and the key lessons about ET learned from each iteration. We also focus on recent and growing efforts to exploit DNA as a scaffold for assembling molecular dye aggregates that host delocalized excitons as a test bed for creating excitonic circuits and accessing other quantum-like optical phenomena. We conclude with an outlook on what is still required to transition these materials from a research pursuit to application specific prototypes and beyond.
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Affiliation(s)
- Divita Mathur
- Department of Chemistry, Case Western Reserve University, Cleveland OH 44106, USA
| | - Sebastián A Díaz
- Center for Bio/Molecular Science and Engineering, Code 6900, USA.
| | - Niko Hildebrandt
- Department of Chemistry, Seoul National University, Seoul 08826, South Korea
- Department of Engineering Physics, McMaster University, Hamilton, L8S 4L7, Canada
| | - Ryan D Pensack
- Micron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USA.
| | - Bernard Yurke
- Micron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USA.
| | - Austin Biaggne
- Micron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USA.
| | - Lan Li
- Micron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USA.
- Center for Advanced Energy Studies, Idaho Falls, ID 83401, USA
| | - Joseph S Melinger
- Electronics Science and Technology Division, Code 6800, U.S. Naval Research Laboratory, Washington, DC 20375, USA
| | - Mario G Ancona
- Electronics Science and Technology Division, Code 6800, U.S. Naval Research Laboratory, Washington, DC 20375, USA
- Department of Electrical and Computer Engineering, Florida State University, Tallahassee, FL 32310, USA
| | - William B Knowlton
- Micron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USA.
| | - Igor L Medintz
- Center for Bio/Molecular Science and Engineering, Code 6900, USA.
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6
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Wei YC, Chen BH, Ye RS, Huang HW, Su JX, Lin CY, Hodgkiss J, Hsu LY, Chi Y, Chen K, Lu CH, Yang SD, Chou PT. Excited-State THz Vibrations in Aggregates of Pt II Complexes Contribute to the Enhancement of Near-Infrared Emission Efficiencies. Angew Chem Int Ed Engl 2023; 62:e202300815. [PMID: 36825300 DOI: 10.1002/anie.202300815] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 02/23/2023] [Accepted: 02/23/2023] [Indexed: 02/25/2023]
Abstract
The exploration of deactivation mechanisms for near-infrared(NIR)-emissive organic molecules has been a key issue in chemistry, materials science and molecular biology. In this study, based on transient absorption spectroscopy and transient grating photoluminescence spectroscopy, we demonstrate that the aggregated PtII complex 4H (efficient NIR emitter) exhibits collective out-of-plane motions with a frequency of 32 cm-1 (0.96 THz) in the excited states. Importantly, similar THz characteristics were also observed in analogous PtII complexes with prominent NIR emission efficiency. The conservation of THz motions enables excited-state deactivation to proceed along low-frequency vibrational coordinates, contributing to the suppression of nonradiative decay and remarkable NIR emission. These novel results highlight the significance of excited-state vibrations in nonradiative processes, which serve as a benchmark for improving device performance.
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Affiliation(s)
- Yu-Chen Wei
- Department of Chemistry, National Taiwan University, Taipei, 10617, Taiwan
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, 10617, Taiwan
| | - Bo-Han Chen
- Institute of Photonics Technologies, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Ren-Siang Ye
- Institute of Photonics Technologies, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Hsing-Wei Huang
- Institute of Photonics Technologies, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Jia-Xuan Su
- Institute of Photonics Technologies, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Chao-Yang Lin
- Robinson Research Institute, Faculty of Engineering, Victoria University of Wellington, Wellington, 6012, New Zealand
| | - Justin Hodgkiss
- MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, 6010, New Zealand
| | - Lian-Yan Hsu
- Department of Chemistry, National Taiwan University, Taipei, 10617, Taiwan
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, 10617, Taiwan
- National Center for Theoretical Sciences, Taipei, 10617, Taiwan
| | - Yun Chi
- Department of Materials Science and Engineering, Department of Chemistry, and Center of Super-Diamond and Advanced Films (COSDAF), City University of Hong Kong, Hong Kong SAR, Hong Kong
| | - Kai Chen
- Robinson Research Institute, Faculty of Engineering, Victoria University of Wellington, Wellington, 6012, New Zealand
- MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, 6010, New Zealand
- The Dodd-Walls Centre for Photonic and Quantum Technologies, Dunedin, 9016, New Zealand
| | - Chih-Hsuan Lu
- Institute of Photonics Technologies, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Shang-Da Yang
- Institute of Photonics Technologies, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Pi-Tai Chou
- Department of Chemistry, National Taiwan University, Taipei, 10617, Taiwan
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7
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Wei Y, Chen B, Ye R, Huang H, Su J, Lin C, Hodgkiss J, Hsu L, Chi Y, Chen K, Lu C, Yang S, Chou P. Excited‐State THz Vibrations in Aggregates of Pt
II
Complexes Contribute to the Enhancement of Near‐Infrared Emission Efficiencies**. Angew Chem Int Ed Engl 2023. [DOI: 10.1002/ange.202300815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/16/2023]
Affiliation(s)
- Yu‐Chen Wei
- Department of Chemistry National Taiwan University Taipei 10617 Taiwan
- Institute of Atomic and Molecular Sciences Academia Sinica Taipei 10617 Taiwan
| | - Bo‐Han Chen
- Institute of Photonics Technologies National Tsing Hua University Hsinchu 30013 Taiwan
| | - Ren‐Siang Ye
- Institute of Photonics Technologies National Tsing Hua University Hsinchu 30013 Taiwan
| | - Hsing‐Wei Huang
- Institute of Photonics Technologies National Tsing Hua University Hsinchu 30013 Taiwan
| | - Jia‐Xuan Su
- Institute of Photonics Technologies National Tsing Hua University Hsinchu 30013 Taiwan
| | - Chao‐Yang Lin
- Robinson Research Institute Faculty of Engineering Victoria University of Wellington Wellington 6012 New Zealand
| | - Justin Hodgkiss
- MacDiarmid Institute for Advanced Materials and Nanotechnology Wellington 6010 New Zealand
| | - Lian‐Yan Hsu
- Department of Chemistry National Taiwan University Taipei 10617 Taiwan
- Institute of Atomic and Molecular Sciences Academia Sinica Taipei 10617 Taiwan
- National Center for Theoretical Sciences Taipei 10617 Taiwan
| | - Yun Chi
- Department of Materials Science and Engineering Department of Chemistry and Center of Super-Diamond and Advanced Films (COSDAF) City University of Hong Kong Hong Kong SAR Hong Kong
| | - Kai Chen
- Robinson Research Institute Faculty of Engineering Victoria University of Wellington Wellington 6012 New Zealand
- MacDiarmid Institute for Advanced Materials and Nanotechnology Wellington 6010 New Zealand
- The Dodd-Walls Centre for Photonic and Quantum Technologies Dunedin 9016 New Zealand
| | - Chih‐Hsuan Lu
- Institute of Photonics Technologies National Tsing Hua University Hsinchu 30013 Taiwan
| | - Shang‐Da Yang
- Institute of Photonics Technologies National Tsing Hua University Hsinchu 30013 Taiwan
| | - Pi‐Tai Chou
- Department of Chemistry National Taiwan University Taipei 10617 Taiwan
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8
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Barclay MS, Chowdhury AU, Biaggne A, Huff JS, Wright ND, Davis PH, Li L, Knowlton WB, Yurke B, Pensack RD, Turner DB. Probing DNA structural heterogeneity by identifying conformational subensembles of a bicovalently bound cyanine dye. J Chem Phys 2023; 158:035101. [PMID: 36681650 DOI: 10.1063/5.0131795] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
DNA is a re-configurable, biological information-storage unit, and much remains to be learned about its heterogeneous structural dynamics. For example, while it is known that molecular dyes templated onto DNA exhibit increased photostability, the mechanism by which the structural dynamics of DNA affect the dye photophysics remains unknown. Here, we use femtosecond, two-dimensional electronic spectroscopy measurements of a cyanine dye, Cy5, to probe local conformations in samples of single-stranded DNA (ssDNA-Cy5), double-stranded DNA (dsDNA-Cy5), and Holliday junction DNA (HJ-DNA-Cy5). A line shape analysis of the 2D spectra reveals a strong excitation-emission correlation present in only the dsDNA-Cy5 complex, which is a signature of inhomogeneous broadening. Molecular dynamics simulations support the conclusion that this inhomogeneous broadening arises from a nearly degenerate conformer found only in the dsDNA-Cy5 complex. These insights will support future studies on DNA's structural heterogeneity.
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Affiliation(s)
- Matthew S Barclay
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Azhad U Chowdhury
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Austin Biaggne
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Jonathan S Huff
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Nicholas D Wright
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Paul H Davis
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Lan Li
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - William B Knowlton
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Bernard Yurke
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Ryan D Pensack
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
| | - Daniel B Turner
- Micron School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, USA
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9
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Sahu A, Bhat VN, Patra S, Tiwari V. High-sensitivity fluorescence-detected multidimensional electronic spectroscopy through continuous pump-probe delay scan. J Chem Phys 2023; 158:024201. [PMID: 36641398 DOI: 10.1063/5.0130887] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Fluorescence-detected multidimensional electronic spectroscopy (fMES) promises high sensitivity compared to conventional approaches and is an emerging spectroscopic approach toward combining the advantages of MES with the spatial resolution of a microscope. Here, we present a visible white light continuum-based fMES spectrometer and systematically explore the sensitivity enhancement expected from fluorescence detection. As a demonstration of sensitivity, we report room temperature two-dimensional coherence maps of vibrational quantum coherences in a laser dye at optical densities of ∼2-3 orders of magnitude lower than conventional approaches. This high sensitivity is enabled by a combination of biased sampling along the optical coherence time axes and a rapid scan of the pump-probe waiting time T at each sample. A combination of this approach with acousto-optic phase modulation and phase-sensitive lock-in detection enables measurements of room temperature vibrational wavepackets even at the lowest ODs. Alternative faster data collection schemes, which are enabled by the flexibility of choosing a non-uniform undersampled grid in the continuous T scanning approach, are also demonstrated.
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Affiliation(s)
- Amitav Sahu
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, Karnataka, 560012, India
| | - Vivek N Bhat
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, Karnataka, 560012, India
| | - Sanjoy Patra
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, Karnataka, 560012, India
| | - Vivek Tiwari
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, Karnataka, 560012, India
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