Comparative Study of the Adsorption of Thiols and Selenols on Au(111) and Au(100)

Insight into the promotion mechanism of the surface plasmon resonance aptasensor based on ultrathin MBene nanosheets embedded with aptamer-templated silver nanoclusters for aptasensing exosomal marker

The sensitive and reliable detection of exosomes is crucial for the early diagnosis and prognosis of various diseases. This work presents a label-free surface plasmon resonance (SPR) aptasensor based on two-dimensional (2D) ultrathin cobalt boride nanosheets embedded with aptamer-templated silver nanoclusters (Apt/AgNCs@CoB) for the sensitive detection of the exosomal marker CD63. The Apt/AgNCs@CoB Schottky junction exhibited a high light absorption, which enhanced the coupling with SPR and promoted the electric field at the interface. This heterojunction facilitated strong charge transfer at the SPR sensing interface and amplified the SPR signal due to the localized SPR of the silver nanoclusters. Furthermore, the integration of aptamer strands in the Apt/AgNCs@CoB nanohybrid ensured the stable anchorage of probe molecules and high affinity for the target analyte. This integration simplified the aptasensor construction through a one-step modification of the SPR gold chip, which led to the improved sensitivity and direct detection of CD63. The proposed SPR aptasensor achieved an ultralow detection limit of 0.15 fg mL-1 while maintaining an outstanding selectivity for CD63 detection. In addition, the developed SPR aptasensor demonstrated recoveries ranging from 92.6 % to 98.4 % during CD63 detection in human serum samples. This 2D Apt/AgNCs@CoB nanohybrid-based SPR aptasensor offers a novel and highly sensitive sensing platform for the detection of exosomal markers, with important potential applications in cancer diagnosis.

Formation, Structure, and Thermal Annealing Effects of Ordered Self-Assembled Monolayers of 4-Fluorobenzeneselenol on Au(111)

The formation, surface structure, and thermal annealing effects of self-assembled monolayers (SAMs) via vapor deposition of 4-fluorobenzeneselenol (4-FBSeH) on Au(111) at room temperature were investigated using scanning tunneling microscopy (STM). The most prominent structural feature is that 4-fluorobenzeneselenolate (4-FBSe) SAMs on Au(111) are composed of numerous SAM-covered Au adatom islands, regardless of the deposition time. High-resolution STM observations revealed that the ordered phase of 4-FBSe SAMs was formed after very short deposition times of 30 s and 3 min, whereas the disordered phase was formed after long deposition times of 1 h and 24 h. The ordered phase can be described as a (4 × 2√3) structure, and the average areal molecular density of the SAMs was calculated to be 29.0 Å2/molecule, suggesting the formation of densely packed monolayers with a standing-up adsorption structure. Interestingly, after thermal annealing at 373 K for 30 min, the (4 × 2√3) ordered phase of the SAMs was transformed to randomly distributed, short, single-molecular rows ranging from several nanometers to approximately ten nanometers in length, which has not been observed previously in organic thiolate SAMs. The high-resolution STM results of this study can provide very meaningful information for understanding the formation, surface structure, and thermal annealing effects of 4-FBSe SAMs on Au(111).

Novel mixed self-assembled monolayers of L-cysteine and methanol on gold surfaces under ambient conditions

In this work, we carried out an experimental and theoretical study on the formation of self-assembled monolayers of L-cysteine molecules on gold surfaces in the presence of methanol as a solvent. We report for the first time L-cysteine and methanol ordered structures forming a mixed self-assembled mono-layer on Au(100) surfaces under ambient conditions. Finger-like ordered structures with a relative height of 0.10-0.20 nm, average width of 2.0 nm and variable lengths were observed using scanning tunneling microscopy under room temperature and ambient pressure conditions. Using X-ray photoemission spectroscopy, it was determined that L-cysteine molecules bind to the gold surface through the sulfur atom of their thiol group in two molecular configurations: neutral and zwitterionic. We found that the finger-like structures are the result of complex interactions of L-cysteine molecules with gold surfaces and L-cysteine molecules with methanol molecules and among all three components of the system (L-cysteine + methanol + gold surfaces). These interactions were detected through attenuated total reflectance-Fourier transform infrared spectroscopy. Furthermore, adsorbate/substrate interactions were studied by employing ab initio calculations using density functional theory, resulting in molecular arrangements formed by chains of L-cysteine pairs surrounded by physisorbed methanol molecules.

In Situ Photodeposition of Gold Nanoparticles with Exposed High-Activity Crystal Facets under Different Sacrificial Agents

In situ photodeposition presents a powerful approach for integrating noble metal co-catalysts onto semiconductor surfaces. However, achieving precise control over the microstructure of the deposited co-catalyst remains a major challenge. Au nanoparticles (NPs) are deposited onto H-KCNO using HAuCl4 in the presence of various sacrificial agents in this study. Notably, the choice of sacrificial agent decisively influences the exposed crystal facets, loaded content, and particle size of the deposited Au NPs. Importantly, in situ photodeposition under an ethanol solution facilitates the exposure of the highly active (111) and (220) crystal facets of Au. The introduction of Au NPs significantly enhances photocatalytic hydrogen evolution, achieving rates of 4.93, 57.88, and 15.44 μmol/h for H-KCNO/Au-(water, ethanol, and lactic acid), respectively. The observed photocatalytic activity for hydrogen evolution indicates that the exposure of the highly active planes emerges as critical for significant performance enhancement. Photoelectrochemical and photoluminescence measurements suggest that the highly active (111) and (220) crystal facets effectively segregate sites for redox reactions, thereby impeding the recombination of photogenerated electron-hole pairs.

An Efficient Multilayer Approach to Model DNA-Based Nanobiosensors

In this work, we present a full computational protocol to successfully obtain the one-electron reduction potential of nanobiosensors based on a self-assembled monolayer of DNA nucleobases linked to a gold substrate. The model is able to account for conformational sampling and environmental effects at a quantum mechanical (QM) level efficiently, by combining molecular mechanics (MM) molecular dynamics and multilayer QM/MM/continuum calculations within the framework of Marcus theory. The theoretical model shows that a guanine-based biosensor is more prone to be oxidized than the isolated nucleobase in water due to the electrostatic interactions between the assembled guanine molecules. In addition, the redox properties of the biosensor can be tuned by modifying the nature of the linker that anchor the nucleobases to the metal support.

Formation and Thermal Stability of Ordered Self-Assembled Monolayers by the Adsorption of Amide-Containing Alkanethiols on Au(111)

We examined the surface structure, binding conditions, electrochemical behavior, and thermal stability of self-assembled monolayers (SAMs) on Au(111) formed by N-(2-mercaptoethyl)heptanamide (MEHA) containing an amide group in an inner alkyl chain using scanning tunneling microscopy (STM), X-ray photoelectron spectroscopy (XPS), and cyclic voltammetry (CV) to understand the effects of an internal amide group as a function of deposition time. The STM study clearly showed that the structural transitions of MEHA SAMs on Au(111) occurred from the liquid phase to the formation of a closely packed and well-ordered β-phase via a loosely packed α-phase as an intermediate phase, depending on the deposition time. XPS measurements showed that the relative peak intensities of chemisorbed sulfur against Au 4f for MEHA SAMs formed after deposition for 1 min, 10 min, and 1 h were calculated to be 0.0022, 0.0068, and 0.0070, respectively. Based on the STM and XPS results, it is expected that the formation of a well-ordered β-phase is due to an increased adsorption of chemisorbed sulfur and the structural rearrangement of molecular backbones to maximize lateral interactions resulting from a longer deposition period of 1 h. CV measurements showed a significant difference in the electrochemical behavior of MEHA and decanethiol (DT) SAMs as a result of the presence of an internal amide group in the MEHA SAMs. Herein, we report the first high-resolution STM image of well-ordered MEHA SAMs on Au(111) with a (3 × 2√3) superlattice (β-phase). We also found that amide-containing MEHA SAMs were thermally much more stable than DT SAMs due to the formation of internal hydrogen networks in MEHA SAMs. Our molecular-scale STM results provide new insight into the growth process, surface structure, and thermal stability of amide-containing alkanethiols on Au(111).

Self-Assembled Decanethiolate Monolayers on Au(001): Expanding the Family of Known Phases

We have studied decanethiolate self-assembled monolayers on the Au(001) surface. Planar and striped phases, as well as disordered regions, have formed after exposing the Au surface to a decanethiol solution. The planar phases that we observe have a hexagonal symmetry and have not been previously reported for thiols on the Au(001) surface and have lower coverage compared to that of the other known thiol planar phases such as the square α phase. The striped phases that we observe are similar to the previously reported β phase but still feature unit cells that cannot be modeled as the archetype, and the coverage is also somewhat lower. The disordered decanethiolate regions are more dynamic compared to the ordered phases, confirmed with I(t) spectroscopy. This suggests that in these regions the coverage is too low in order to form ordered decanethiolate phases. Our findings contribute to the growing family of possible decanethiol formations on the Au(001) surface, for which still less is known compared to the extensive overview present for the Au(111) surface.

Thermally Driven Structural Order of Oligo(Ethylene Glycol)-Terminated Alkanethiol Monolayers on Au(111) Prepared by Vapor Deposition

To probe the effects of deposition temperature on the formation and structural order of self-assembled monolayers (SAMs) on Au(111) prepared by vapor deposition of 2-(2-methoxyethoxy)ethanethiol (CH3O(CH2)2O(CH2)2SH, EG2) for 24 h, we examined the surface structure and electrochemical behavior of the resulting EG2 SAMs using scanning tunneling microscopy (STM) and cyclic voltammetry (CV). STM observations clearly revealed that EG2 SAMs vapor-deposited on Au(111) at 298 K were composed of a disordered phase on the entire Au surface, whereas those formed at 323 K showed improved structural order, showing a mixed phase of ordered and disordered phases. Moreover, at 348 K, uniform and highly ordered EG2 SAMs on Au(111) were formed with a (2 × 3√3) packing structure. CV measurements showed sharp reductive desorption (RD) peaks at −0.818, −0.861, and −0.880 V for EG2 SAM-modified Au electrodes formed at 298, 323, and 348 K, respectively. More negative potential shifts of RD peaks with increasing deposition temperature are attributed to an increase in van der Waals interactions between EG2 molecular backbones resulting from the improved structural quality of EG2 SAMs. Our results obtained herein provide new insights into the formation and thermally driven structural order of oligo(ethylene glycol)-terminated SAMs vapor-deposited on Au(111).

Selenocystine and Photo-Irradiation Directed Growth of Helically Grooved Gold Nanoarrows

The fabrication of discrete nanostructures with both plasmonic circular dichroism (PCD) and chiral features is still a challenge. Here, gold nanoarrows (GNAs) with both chiroptical responses and chiral morphologies are achieved by using L-selenocystine (L-SeCys₂ ) as a chiral inducer. While L-SeCys₂ generates GNAs with a weak PCD signal, the irradiated L-SeCys₂ (irr-L-SeCys₂ ) leads to GNAs with featured helical grooves (HeliGNAs) accompanying with a strong PCD signal. It is revealed that when L-SeCys₂ is photo-irradiated, the emergence of selenyl radicals plays an important role in the formation of HeliGNAs and enhancement of the chiroptical signal. In comparison with L-SeCys₂ and the other kinds of sulfur-containing amino acids, the formation mechanism of helical grooves on the surface of GNAs is proposed. Both HeliGNAs and GNAs are used to discriminate amino acids by utilizing surface enhanced Raman scattering (SERS) effect. In the presence of either GNAs or HeliGNAs as the substrate, Fmoc-L-Phe shows more significant SERS than Fmoc-D-Phe. This study may advance the design of discrete plasmonic nanomaterials with both chiral morphology and potential applications in discrimination of chiral molecules.

Structural Order of the Molecular Adlayer Impacts the Stability of Nanoparticle-on-Mirror Plasmonic Cavities

Immense field enhancement and nanoscale confinement of light are possible within nanoparticle-on-mirror (NPoM) plasmonic resonators, which enable novel optically activated physical and chemical phenomena and render these nanocavities greatly sensitive to minute structural changes, down to the atomic scale. Although a few of these structural parameters, primarily linked to the nanoparticle and the mirror morphology, have been identified, the impact of molecular assembly and organization of the spacer layer between them has often been left uncharacterized. Here, we experimentally investigate how the complex and reconfigurable nature of a thiol-based self-assembled monolayer (SAM) adsorbed on the mirror surface impacts the optical properties of the NPoMs. We fabricate NPoMs with distinct molecular organizations by controlling the incubation time of the mirror in the thiol solution. Afterward, we investigate the structural changes that occur under laser irradiation by tracking the bonding dipole plasmon mode, while also monitoring Stokes and anti-Stokes Raman scattering from the molecules as a probe of their integrity. First, we find an effective decrease in the SAM height as the laser power increases, compatible with an irreversible change of molecule orientation caused by heating. Second, we observe that the nanocavities prepared with a densely packed and more ordered monolayer of molecules are more prone to changes in their resonance compared to samples with sparser and more disordered SAMs. Our measurements indicate that molecular orientation and packing on the mirror surface play a key role in determining the stability of NPoM structures and hence highlight the under-recognized significance of SAM characterization in the development of NPoM-based applications.

In situ surface-enhanced electronic and vibrational Raman scattering spectroscopy at metal/molecule interfaces

SERS signals from nanostructured surfaces of Au, covered with thiol monolayers, were monitored under application of various electrochemical potentials over a wide Raman-shift range of both the Stokes and anti-Stokes branches. The background continuum in the SERS spectra varied in intensity with apparent correlations with breaking of Au-S bond or evolution of Au-O. This clearly indicates that the origin of the background can be ascribed to non-resonant electronic Raman scattering, which is sensitive to the electronic density at the surface. Using the property of the electronic Raman scattering, full information on the electric double layer at both sides of the metal/dielectric interface was analysed. In the low Raman-shift region below 200 cm-1, moreover, the evolution and disappearance of collective motions of thiol assembly was able to be monitored in situ, which is hardly obtainable with other vibrational absorption spectroscopies.