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Smolobochkin A, Gazizov A, Appazov N, Sinyashin O, Burilov A. Progress in the Stereoselective Synthesis Methods of Pyrrolidine-Containing Drugs and Their Precursors. Int J Mol Sci 2024; 25:11158. [PMID: 39456938 PMCID: PMC11508981 DOI: 10.3390/ijms252011158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2024] [Revised: 10/11/2024] [Accepted: 10/12/2024] [Indexed: 10/28/2024] Open
Abstract
The presented review systematizes and summarizes the data on the synthesis of pyrrolidine derivatives, which are precursors for obtaining drugs. Based on the analysis of published data, the most promising directions in the synthesis of biologically active compounds containing a pyrrolidine ring are identified. Stereoselective synthesis methods are classified based on the source of the pyrrolidine ring. The first group includes methods that use a pyrrolidine ring as the starting compound. The second group combines stereoselective methods of cyclization of acyclic starting compounds, which lead to optically pure pyrrolidine derivatives.
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Affiliation(s)
- Andrey Smolobochkin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str., 8, Kazan 420088, Russia; (A.G.); (O.S.); (A.B.)
| | - Almir Gazizov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str., 8, Kazan 420088, Russia; (A.G.); (O.S.); (A.B.)
| | - Nurbol Appazov
- Laboratory of Engineering Profile, Department of Engineering Technology, Korkyt Ata Kyzylorda University, Aiteke bi Str., 29A, Kyzylorda 120014, Kazakhstan
| | - Oleg Sinyashin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str., 8, Kazan 420088, Russia; (A.G.); (O.S.); (A.B.)
| | - Alexander Burilov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str., 8, Kazan 420088, Russia; (A.G.); (O.S.); (A.B.)
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Nonnhoff J, Gröger H. Process Development of the Copper(II)-Catalyzed Dehydration of a Chiral Aldoxime and Rational Selection of the Co-Substrate. ChemistryOpen 2022; 11:e202100230. [PMID: 34889532 PMCID: PMC8734112 DOI: 10.1002/open.202100230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2021] [Revised: 10/24/2021] [Indexed: 11/16/2022] Open
Abstract
The access towards chiral nitriles remains crucial in the synthesis of several pharmaceuticals. One approach is based on metal-catalyzed dehydration of chiral aldoximes, which are generated from chiral pool-derived aldehydes as substrates, and the use of a cheap and readily available nitrile as co-substrate and water acceptor. Dehydration of N-acyl α-amino aldoximes such as N-Boc-l-prolinal oxime catalyzed by copper(II) acetate provides access to the corresponding N-acyl α-amino nitriles, which are substructures of the pharmaceuticals Vildagliptin and Saxagliptin. In this work, a detailed investigation of the formation of the amide as a by-product at higher substrate loadings is performed. The amide formation depends on the electronic properties of the nitrile co-substrate. We could identify an acceptor nitrile which completely suppressed amide formation at high substrate loadings of 0.5 m even when being used with only 2 equivalents. In detail, utilization of trichloroacetonitrile as such an acceptor nitrile enabled the synthesis of N-Boc-cyanopyrrolidine in a high yield of 92 % and with full retention of the absolute configuration.
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Affiliation(s)
- Jannis Nonnhoff
- Chair of Industrial Organic Chemistry and BiotechnologyFaculty of ChemistryBielefeld UniversityUniversitätsstrasse 2533615BielefeldGermany
| | - Harald Gröger
- Chair of Industrial Organic Chemistry and BiotechnologyFaculty of ChemistryBielefeld UniversityUniversitätsstrasse 2533615BielefeldGermany
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Gröger H, Nonnhoff J. Process Development of a Copper(II)-Catalyzed Dehydration of an N-Acyl Prolinal Oxime: Cascade Process and Application at an Elevated Lab Scale. SYNTHESIS-STUTTGART 2021. [DOI: 10.1055/a-1549-0903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
AbstractChiral N-acyl amino nitriles are important structural motifs in several pharmaceuticals such as Vildagliptin or Saxagliptin. Cyanide-free access to such nitriles is provided by a copper-catalyzed dehydration of oximes, which are readily available by condensation of chiral aldehydes resulting from the chiral pool with hydroxylamine. The application in a cascade process without the need for intermediate purification as well as a demonstrated scalability show the robustness of this methodology.
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Adebar N, Nastke A, Löwe J, Gröger H. Segmented Flow Processes to Overcome Hurdles of Whole-Cell Biocatalysis in the Presence of Organic Solvents. Angew Chem Int Ed Engl 2021; 60:15863-15869. [PMID: 33713367 PMCID: PMC8362180 DOI: 10.1002/anie.202015887] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2020] [Revised: 03/02/2021] [Indexed: 12/12/2022]
Abstract
In modern process development, it is imperative to consider biocatalysis, and whole-cell catalysts often represent a favored form of such catalysts. However, the application of whole-cell catalysis in typical organic batch two-phase synthesis often struggles due to mass transfer limitations, emulsion formation, tedious work-up and, thus, low yields. Herein, we demonstrate that utilizing segmented flow tools enables the conduction of whole-cell biocatalysis efficiently in biphasic media. Exemplified for three different biotransformations, the power of such segmented flow processes is shown. For example, a 3-fold increase of conversion from 34 % to >99 % and a dramatic simplified work-up leading to a 1.5-fold higher yield from 44 % to 65 % compared to the analogous batch process was achieved in such a flow process.
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Affiliation(s)
- Niklas Adebar
- Chair of Industrial Organic Chemistry and BiotechnologyFaculty of ChemistryBielefeld UniversityUniversitätsstr. 2533615BielefeldGermany
| | - Alina Nastke
- Chair of Industrial Organic Chemistry and BiotechnologyFaculty of ChemistryBielefeld UniversityUniversitätsstr. 2533615BielefeldGermany
| | - Jana Löwe
- Chair of Industrial Organic Chemistry and BiotechnologyFaculty of ChemistryBielefeld UniversityUniversitätsstr. 2533615BielefeldGermany
| | - Harald Gröger
- Chair of Industrial Organic Chemistry and BiotechnologyFaculty of ChemistryBielefeld UniversityUniversitätsstr. 2533615BielefeldGermany
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Adebar N, Nastke A, Löwe J, Gröger H. Segmentierte Flow‐Prozesse zur Überwindung von Limitierungen der Ganzzell‐Biokatalyse in Gegenwart von organischen Lösungsmitteln. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202015887] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Niklas Adebar
- Lehrstuhl für Industrielle Organische Chemie und Biotechnologie Fakultät der Chemie Universität Bielefeld Universitätsstr. 25 33615 Bielefeld Deutschland
| | - Alina Nastke
- Lehrstuhl für Industrielle Organische Chemie und Biotechnologie Fakultät der Chemie Universität Bielefeld Universitätsstr. 25 33615 Bielefeld Deutschland
| | - Jana Löwe
- Lehrstuhl für Industrielle Organische Chemie und Biotechnologie Fakultät der Chemie Universität Bielefeld Universitätsstr. 25 33615 Bielefeld Deutschland
| | - Harald Gröger
- Lehrstuhl für Industrielle Organische Chemie und Biotechnologie Fakultät der Chemie Universität Bielefeld Universitätsstr. 25 33615 Bielefeld Deutschland
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Grundke C, Vierengel N, Opatz T. ‐Aminonitriles: From Sustainable Preparation to Applications in Natural Product Synthesis. CHEM REC 2020; 20:989-1016. [DOI: 10.1002/tcr.202000066] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Revised: 07/02/2020] [Accepted: 07/02/2020] [Indexed: 12/21/2022]
Affiliation(s)
- Caroline Grundke
- Department of Chemistry Johannes Gutenberg University Duesbergweg 10–14 55128 Mainz Germany
| | - Nina Vierengel
- Department of Chemistry Johannes Gutenberg University Duesbergweg 10–14 55128 Mainz Germany
| | - Till Opatz
- Department of Chemistry Johannes Gutenberg University Duesbergweg 10–14 55128 Mainz Germany
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Gröger H, Asano Y. Cyanide-Free Enantioselective Catalytic Strategies for the Synthesis of Chiral Nitriles. J Org Chem 2020; 85:6243-6251. [PMID: 32250626 DOI: 10.1021/acs.joc.9b02773] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
The development of enantioselective syntheses of nitriles gained increasing interest due to, e.g., an increasing demand for chiral nitriles for drug synthesis. Complementing existing routes, recently catalytic processes enabling an enantioselective formation of the chiral nitrile moiety without the need to utilize cyanide were accomplished. It is noteworthy that these processes are complementary to each other as they are based on different types of substrates, catalytic methods (utilizing chemo- and biocatalysts), and stereochemical reaction concepts (asymmetric synthesis versus resolution).
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Affiliation(s)
- Harald Gröger
- Chair of Industrial Organic Chemistry and Biotechnology, Faculty of Chemistry, Bielefeld University, Universitätsstr. 25, 33615 Bielefeld, Germany.,Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan
| | - Yasuhisa Asano
- Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan
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Li YH, Akula PS, Hong BC, Peng CH, Lee GH. Direct Transformation of Nitroalkanes to Nitriles Enabled by Visible-Light Photoredox Catalysis and a Domino Reaction Process. Org Lett 2019; 21:7750-7754. [PMID: 31513414 DOI: 10.1021/acs.orglett.9b02682] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A mild and convenient process for direct transformation of nitroalkanes to the corresponding nitriles was developed using a visible-light photoredox catalysis strategy with household decorative blue LEDs and the additives of Et3N and DIPIBA (or DIPEA). Application of the process in secondary nitroalkanes bearing a β-alcohol resulted in a domino process of the retro-Henry reaction and the subsequent acetalization, aldol, cyanohydrin, and ring-contraction reactions with stereoselectivities. The photocatalytic reaction was demonstrated by a continuous flow method.
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Affiliation(s)
- Yu-Hsun Li
- Department of Chemistry and Biochemistry , National Chung Cheng University , Chia-Yi 621 , Taiwan, R.O.C
| | - Pavan Sudheer Akula
- Department of Chemistry and Biochemistry , National Chung Cheng University , Chia-Yi 621 , Taiwan, R.O.C
| | - Bor-Cherng Hong
- Department of Chemistry and Biochemistry , National Chung Cheng University , Chia-Yi 621 , Taiwan, R.O.C
| | - Chieh-Hung Peng
- Department of Chemistry and Biochemistry , National Chung Cheng University , Chia-Yi 621 , Taiwan, R.O.C
| | - Gene-Hsiang Lee
- Instrumentation Center , National Taiwan University , Taipei , 106 , Taiwan, R.O.C
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Bi HY, Du M, Pan CX, Xiao Y, Su GF, Mo DL. Nickel(II)-Catalyzed [5 + 1] Annulation of 2-Carbonyl-1-propargylindoles with Hydroxylamine To Synthesize Pyrazino[1,2- a]indole-2-oxides in Water. J Org Chem 2019; 84:9859-9868. [PMID: 31347845 DOI: 10.1021/acs.joc.9b00784] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
An atom-economical and practical method for the efficient synthesis of various pyrazino[1,2-a]indole-2-oxides was developed through a nickel(II)-catalyzed [5 + 1] annulation of 2-carbonyl-1-propargylindoles with hydroxylamine in water without using an organic solvent. The reaction involved an initial condensation of 2-carbonyl-1-propargylindoles with hydroxylamine to afford oxime intermediates, which then underwent a nickel(II)-catalyzed 6-exo-dig cyclization. Preliminary studies showed that (n-Bu)4NI served as a phase transfer catalyst and promoted the formation of active nickel(II) species. More importantly, the nickel(II) salt and phase transfer catalyst-in-water could be recycled seven times, and a gram scalable product was easily obtained in good yields through a filtration and washing protocol.
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Affiliation(s)
- Hong-Yan Bi
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources, Ministry of Science and Technology of China, School of Chemistry & Pharmaceutical Sciences , Guangxi Normal University , 15 Yu Cai Road , Guilin 541004 , China
| | - Min Du
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources, Ministry of Science and Technology of China, School of Chemistry & Pharmaceutical Sciences , Guangxi Normal University , 15 Yu Cai Road , Guilin 541004 , China
| | - Cheng-Xue Pan
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources, Ministry of Science and Technology of China, School of Chemistry & Pharmaceutical Sciences , Guangxi Normal University , 15 Yu Cai Road , Guilin 541004 , China
| | - Yuhong Xiao
- School of Chemistry and Chemical Engineering , Hunan University of Science and Technology , Xiangtan 411201 , P. R. China
| | - Gui-Fa Su
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources, Ministry of Science and Technology of China, School of Chemistry & Pharmaceutical Sciences , Guangxi Normal University , 15 Yu Cai Road , Guilin 541004 , China
| | - Dong-Liang Mo
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources, Ministry of Science and Technology of China, School of Chemistry & Pharmaceutical Sciences , Guangxi Normal University , 15 Yu Cai Road , Guilin 541004 , China
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Li X, You C, Yang J, Li S, Zhang D, Lv H, Zhang X. Asymmetric Hydrocyanation of Alkenes without HCN. Angew Chem Int Ed Engl 2019; 58:10928-10931. [DOI: 10.1002/anie.201906111] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2019] [Indexed: 12/23/2022]
Affiliation(s)
- Xiuxiu Li
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
| | - Cai You
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
| | - Jiaxin Yang
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
| | - Shuailong Li
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
| | - Dequan Zhang
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
| | - Hui Lv
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
- Engineering Research Center of Organosilicon Compounds & MaterialsMinistry of Education, Sauvage Center for Molecular SciencesCollege of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
| | - Xumu Zhang
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
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11
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Li X, You C, Yang J, Li S, Zhang D, Lv H, Zhang X. Asymmetric Hydrocyanation of Alkenes without HCN. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201906111] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Xiuxiu Li
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
| | - Cai You
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
| | - Jiaxin Yang
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
| | - Shuailong Li
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
| | - Dequan Zhang
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
| | - Hui Lv
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
- Engineering Research Center of Organosilicon Compounds & MaterialsMinistry of Education, Sauvage Center for Molecular SciencesCollege of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
| | - Xumu Zhang
- Grubbs Institute and Department of ChemistrySouthern University of Science and Technology Shenzhen Guangdong 518000 P. R. China
- Key Laboratory of Biomedical Polymers of Ministry of Education & College of Chemistry and Molecular SciencesWuhan University Wuhan Hubei 430072 China
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Betke T, Higuchi J, Rommelmann P, Oike K, Nomura T, Kato Y, Asano Y, Gröger H. Biocatalytic Synthesis of Nitriles through Dehydration of Aldoximes: The Substrate Scope of Aldoxime Dehydratases. Chembiochem 2018; 19:768-779. [PMID: 29333684 DOI: 10.1002/cbic.201700571] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2017] [Indexed: 11/05/2022]
Abstract
Nitriles, which are mostly needed and produced by the chemical industry, play a major role in various industry segments, ranging from high-volume, low-price sectors, such as polymers, to low-volume, high-price sectors, such as chiral pharma drugs. A common industrial technology for nitrile production is ammoxidation as a gas-phase reaction at high temperature. Further popular approaches are substitution or addition reactions with hydrogen cyanide or derivatives thereof. A major drawback, however, is the very high toxicity of cyanide. Recently, as a synthetic alternative, a novel enzymatic approach towards nitriles has been developed with aldoxime dehydratases, which are capable of converting an aldoxime in one step through dehydration into nitriles. Because the aldoxime substrates are easily accessible, this route is of high interest for synthetic purposes. However, whenever a novel method is developed for organic synthesis, it raises the question of substrate scope as one of the key criteria for application as a "synthetic platform technology". Thus, the scope of this review is to give an overview of the current state of the substrate scope of this enzymatic method for synthesizing nitriles with aldoxime dehydratases. As a recently emerging enzyme class, a range of substrates has already been studied so far, comprising nonchiral and chiral aldoximes. This enzyme class of aldoxime dehydratases shows a broad substrate tolerance and accepts aliphatic and aromatic aldoximes, as well as arylaliphatic aldoximes. Furthermore, aldoximes with a stereogenic center are also recognized and high enantioselectivities are found for 2-arylpropylaldoximes, in particular. It is further noteworthy that the enantiopreference depends on the E and Z isomers. Thus, opposite enantiomers are accessible from the same racemic aldehyde and the same enzyme.
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Affiliation(s)
- Tobias Betke
- Chair of Organic Chemistry I, Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany.,Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama, 939-0398, Japan
| | - Jun Higuchi
- Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama, 939-0398, Japan
| | - Philipp Rommelmann
- Chair of Organic Chemistry I, Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Keiko Oike
- Chair of Organic Chemistry I, Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Taiji Nomura
- Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama, 939-0398, Japan
| | - Yasuo Kato
- Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama, 939-0398, Japan
| | - Yasuhisa Asano
- Biotechnology Research Center, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama, 939-0398, Japan
| | - Harald Gröger
- Chair of Organic Chemistry I, Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
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