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Bennett CS. Stereoselective Approaches to β-Linked 2-Deoxy Sugars. Molecules 2025; 30:1578. [PMID: 40286171 PMCID: PMC11990799 DOI: 10.3390/molecules30071578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2025] [Revised: 03/19/2025] [Accepted: 03/20/2025] [Indexed: 04/29/2025] Open
Abstract
This review presents a survey of recent developments in the synthesis of β-linked 2-deoxy sugars. Approaches ranging from catalysis to de novo synthesis are described, with a focus on methods developed in the last 10 years. Where relevant, the application of these technologies to synthesis and mechanistic information is discussed. Finally, it concludes with an examination of the scope and limitations of these technologies, as well as examinations about where the field should head next.
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Affiliation(s)
- Clay S Bennett
- Department of Chemistry, Tufts University, 62 Talbot Ave, Medford, MA 02155, USA
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2
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Fu D, Li T, Xu S, Meng L, Wan Q, Zeng J. Gram-Scale Synthesis of the Fucose-Containing Fragments of Saccharomicins. Org Lett 2024; 26:9373-9377. [PMID: 39418398 DOI: 10.1021/acs.orglett.4c03599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2024]
Abstract
A highly efficient synthetic route has been established for the gram-scale production of fucose-aglycon (Fuc-Agl) and fucose-saccharosamine (Fuc-Sac) fragments in saccharomicins A and B. The β-glycosidic bonds within these structural components were formed through successive rhodium(II) and Brønsted-acid-catalyzed glycosylation, utilizing a stable thioglycosyl donor. Subsequent steps involving the installation of protecting groups yielded highly functionalized synthetic fragments that are suitable for further assembly of saccharomicins.
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Affiliation(s)
- Dengxian Fu
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei 430030, People's Republic of China
| | - Ting Li
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei 430030, People's Republic of China
| | - Shiwei Xu
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei 430030, People's Republic of China
| | - Lingkui Meng
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei 430030, People's Republic of China
| | - Qian Wan
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei 430030, People's Republic of China
- School of Pharmaceutical Sciences, Wuhan University, Wuhan, Hubei 430071, People's Republic of China
| | - Jing Zeng
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei 430030, People's Republic of China
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3
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Guo H, Kirchhoff JL, Strohmann C, Grabe B, Loh CCJ. Asymmetric Pd/Organoboron-Catalyzed Site-Selective Carbohydrate Functionalization with Alkoxyallenes Involving Noncovalent Stereocontrol. Angew Chem Int Ed Engl 2024; 63:e202400912. [PMID: 38530140 DOI: 10.1002/anie.202400912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 03/19/2024] [Accepted: 03/20/2024] [Indexed: 03/27/2024]
Abstract
Herein, we demonstrate the robustness of a synergistic chiral Pd/organoboron system in tackling a challenging suite of site-, regio-, enantio- and diastereoselectivity issues across a considerable palette of biologically relevant carbohydrate polyols, when prochiral alkoxyallenes were employed as electrophiles. In view of the burgeoning role of noncovalent interactions (NCIs) in stereoselective carbohydrate synthesis, our mechanistic experiments and DFT modeling of the reaction path unexpectedly revealed that NCIs such as hydrogen bonding and CH-π interactions between the resting states of the Pd-π-allyl complex and the borinate saccharide are critically involved in the stereoselectivity control. Our strategy thus illuminates the untapped potential of harnessing NCIs in the context of transition metal catalysis to tackle stereoselectivity challenges in carbohydrate functionalization.
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Affiliation(s)
- Hao Guo
- Abteilung Chemische Biologie, Max Planck Institut für Molekulare Physiologie, Otto-Hahn-Straße 11, 44227, Dortmund, Germany
- Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, 44227, Dortmund, Germany
| | - Jan-Lukas Kirchhoff
- Technische Universität Dortmund, Fakultät für Chemie und Chemische Biologie Anorganische Chemie, Otto-Hahn-Straße 6, 44227, Dortmund, Germany
| | - Carsten Strohmann
- Technische Universität Dortmund, Fakultät für Chemie und Chemische Biologie Anorganische Chemie, Otto-Hahn-Straße 6, 44227, Dortmund, Germany
| | - Bastian Grabe
- NMR Department Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, 44227, Dortmund, Germany
| | - Charles C J Loh
- Abteilung Chemische Biologie, Max Planck Institut für Molekulare Physiologie, Otto-Hahn-Straße 11, 44227, Dortmund, Germany
- Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, 44227, Dortmund, Germany
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4
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Dey R, Jang DJ, Rhee YH. Formal Synthesis of (+)-Sinefungin by Way of Sequential Asymmetric Metal Catalysis. Org Lett 2024; 26:3957-3960. [PMID: 38683026 DOI: 10.1021/acs.orglett.4c01196] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2024]
Abstract
Here, we report a de novo approach toward (+)-sinefungin, a potent inhibitor of the physiological methyl transfer process. A key feature is represented by the sequential metal catalysis combining Pd-catalyzed hydroalkoxylation and ring-rearrangement metathesis. The unique advantage of the method is highlighted by the unprecedented complete control of the C6 stereocenter.
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Affiliation(s)
- Raghunath Dey
- Department of Chemistry, Pohang University of Science and Technology, 77 Cheongam-Ro, Pohang, Kyungbuk 37673, Republic of Korea
| | - Dong-Jin Jang
- Department of Chemistry, Pohang University of Science and Technology, 77 Cheongam-Ro, Pohang, Kyungbuk 37673, Republic of Korea
| | - Young Ho Rhee
- Department of Chemistry, Pohang University of Science and Technology, 77 Cheongam-Ro, Pohang, Kyungbuk 37673, Republic of Korea
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Lee S, Rhee YH. Total Synthesis of the Purported Structure of Branched Resin Glycosides Merremoside G and H 2. Org Lett 2024; 26:602-606. [PMID: 38206072 DOI: 10.1021/acs.orglett.3c03808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
The first total synthesis of the purported structure of branched resin glycosides merremoside G and H2 is accomplished. A signature step is represented by the sequential transition-metal-catalyzed coupling of stable trisaccharide homoallylic alcohol and monosaccharide alkoxyallene to afford the pentasaccharide skeleton. This de novo strategy is conducted under mild conditions with no need of preactivation. In addition, it allows for efficient preparation of the target compounds in combination with late-stage functionalization.
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Affiliation(s)
- Sukhyun Lee
- Department of Chemistry, Pohang University of Science and Technology, Cheongam-Ro 77, Nam-Gu, Pohang, Kyeongbuk 37673, Republic of Korea
| | - Young Ho Rhee
- Department of Chemistry, Pohang University of Science and Technology, Cheongam-Ro 77, Nam-Gu, Pohang, Kyeongbuk 37673, Republic of Korea
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Garreffi BP, Kwok RW, Marianski M, Bennett CS. Origins of Selectivity in Glycosylation Reactions with Saccharosamine Donors. Org Lett 2023; 25:8856-8860. [PMID: 38059593 PMCID: PMC11078471 DOI: 10.1021/acs.orglett.3c03607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2023]
Abstract
A combination of DFT calculations and experiments is used to describe how the selection of a promoter can control the stereochemical outcome of glycosylation reactions with the deoxy sugar saccharosamine. Depending on the promoter, either α- or β-linked reactive intermediates are formed. These studies show that differential modes of activation lead to the formation of distinct intermediates that undergo highly selective reactions through an SN2-like mechanism.
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Affiliation(s)
- Brian P Garreffi
- Department of Chemistry, Tufts University, 62 Talbot Ave, Medford, Massachusetts 02155, United States
| | - Ryan W Kwok
- Department of Chemistry, Hunter College, The City University of New York, 695 Park Ave, New York, New York 10065, United States
- PhD Program in Chemistry, The Graduate Center, The City University of New York, 365 Fifth Ave, New York, New York 10028, United States
| | - Mateusz Marianski
- Department of Chemistry, Hunter College, The City University of New York, 695 Park Ave, New York, New York 10065, United States
- PhD Program in Chemistry, The Graduate Center, The City University of New York, 365 Fifth Ave, New York, New York 10028, United States
| | - Clay S Bennett
- Department of Chemistry, Tufts University, 62 Talbot Ave, Medford, Massachusetts 02155, United States
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Kang J, Rhee YH. Synthesis of the Tetrasaccharide Glycone Part of Tetrocarcin A. J Org Chem 2023. [PMID: 36812358 DOI: 10.1021/acs.joc.2c02832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
Abstract
A de novo synthesis of the tetrasaccharide fragment of tetrocarcin A is described. The key feature of this approach is highlighted by the regio- and diastereoselective Pd-catalyzed hydroalkoxylation of ene-alkoxyallenes with an unprotected l-digitoxose glycoside. The subsequent reaction with digitoxal in combination with chemoselective hydrogenation generated the target molecule.
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Affiliation(s)
- Jihun Kang
- Department of Chemistry, POSTECH, 77 Cheongam-Ro, Nam-Gu, Pohang, Kyungbuk Republic of Korea 37673
| | - Young Ho Rhee
- Department of Chemistry, POSTECH, 77 Cheongam-Ro, Nam-Gu, Pohang, Kyungbuk Republic of Korea 37673
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Garreffi BP, Maney AP, Bennett CS. Synthesis of the Branched Tetrasaccharide Fragment of Saccharomicin A. Org Lett 2023; 25:369-372. [PMID: 36625532 DOI: 10.1021/acs.orglett.2c04081] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
A synthesis of the branched tetrasaccharide fragment of saccharomicin A using 1-OTBS donors to stereoselectively synthesize both α- and β-linked disaccharides is reported. The disaccharides were united using BSP/Tf2O to afford the tetrasaccharide fragment as a single α-anomer in 72% yield. This branched tetrasaccharide fragment can be used as donor and acceptor species to synthesize larger fragments of saccharomicin A.
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Affiliation(s)
- Brian P Garreffi
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Akash P Maney
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Clay S Bennett
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
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