1
|
Usui K, Amano A, Murayama K, Sasaya M, Kusumoto R, Umeno T, Murase S, Iizuka N, Matsumoto S, Fuchi Y, Takahashi K, Kawahata M, Kobori Y, Karasawa S. Photoisomerization of "Partially Embedded Dihydropyridazine" with a Helical Structure. Chemistry 2023; 29:e202302413. [PMID: 37612241 DOI: 10.1002/chem.202302413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 08/21/2023] [Accepted: 08/23/2023] [Indexed: 08/25/2023]
Abstract
Herein, we report the synthesis of two "partially embedded fused-dihydropyridazine N-aryl aza[5]helicene derivatives" (PDHs) and the demonstration of their intrinsic photo-triggered multi-functional properties based on a Kekulé biradical structure. Introducing bulky electron-withdrawing trifluoromethyl or pentafluoroethyl groups into the aza[5]helicene framework (PDH-CF3 and -C2 F5 ) gives PDH axial chirality based on the helicity of the P and M forms, even at room temperature. Upon photo-irradiation of PDH-CF3 in a frozen solution, an ESR signal from the triplet biradical with zero-field splitting values, generated by N-N bond dissociation, was observed. However, when the irradiation was turned off, the ESR signal became silent, thus indicating the existence of two equilibria: between the biradical and quinoidal forms based on the Kekulé structure, and between N-N bond cleavage and recombination. The observed photo- and thermally induced behaviors indicate that T-type photochromic molecules are involved in the photoisomerization mechanism involving the two equilibria. Inspired by the photoisomerization, chirality control of PDH by photoracemization was achieved. Multiple functionalities, such as T-type photochromism, photo-excitation-mediated triplet biradical formation, and photoracemization, which are attributed to the "partially embedded dihydropyridazine" structure, are demonstrated.
Collapse
Affiliation(s)
- Kazuteru Usui
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Ami Amano
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Kasumi Murayama
- Department of Chemistry, Graduate School of Science Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Miho Sasaya
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Ryota Kusumoto
- Department of Chemistry, Graduate School of Science Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Tomohiro Umeno
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Satsuki Murase
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Naoko Iizuka
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Shota Matsumoto
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Yasufumi Fuchi
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Kazuyuki Takahashi
- Department of Chemistry, Graduate School of Science Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Masatoshi Kawahata
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| | - Yasuhiro Kobori
- Department of Chemistry, Graduate School of Science Kobe University, Kobe, Hyogo, 657-8501, Japan
- Molecular Photoscience Research Center, Graduate School of Science Kobe University, Kobe, Hyogo, 657-8501, Japan
| | - Satoru Karasawa
- Faculty of Pharmaceutical Sciences, Showa Pharmaceutical University, 3512-1 Higashi-tamagawagakuen, Machida, Tokyo, 194-8543, Japan
| |
Collapse
|
2
|
Wiesenfeldt MP, Rossi-Ashton JA, Perry IB, Diesel J, Garry OL, Bartels F, Coote SC, Ma X, Yeung CS, Bennett DJ, MacMillan DWC. General access to cubanes as benzene bioisosteres. Nature 2023; 618:513-518. [PMID: 37015289 PMCID: PMC10680098 DOI: 10.1038/s41586-023-06021-8] [Citation(s) in RCA: 27] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 03/27/2023] [Indexed: 04/06/2023]
Abstract
The replacement of benzene rings with sp3-hybridized bioisosteres in drug candidates generally improves pharmacokinetic properties while retaining biological activity1-5. Rigid, strained frameworks such as bicyclo[1.1.1]pentane and cubane are particularly well suited as the ring strain imparts high bond strength and thus metabolic stability on their C-H bonds. Cubane is the ideal bioisostere as it provides the closest geometric match to benzene6,7. At present, however, all cubanes in drug design, like almost all benzene bioisosteres, act solely as substitutes for mono- or para-substituted benzene rings1-7. This is owing to the difficulty of accessing 1,3- and 1,2-disubstituted cubane precursors. The adoption of cubane in drug design has been further hindered by the poor compatibility of cross-coupling reactions with the cubane scaffold, owing to a competing metal-catalysed valence isomerization8-11. Here we report expedient routes to 1,3- and 1,2-disubstituted cubane building blocks using a convenient cyclobutadiene precursor and a photolytic C-H carboxylation reaction, respectively. Moreover, we leverage the slow oxidative addition and rapid reductive elimination of copper to develop C-N, C-C(sp3), C-C(sp2) and C-CF3 cross-coupling protocols12,13. Our research enables facile elaboration of all cubane isomers into drug candidates, thus enabling ideal bioisosteric replacement of ortho-, meta- and para-substituted benzenes.
Collapse
Affiliation(s)
| | | | - Ian B Perry
- Merck Center for Catalysis at Princeton University, Princeton, NJ, USA
| | - Johannes Diesel
- Merck Center for Catalysis at Princeton University, Princeton, NJ, USA
| | - Olivia L Garry
- Merck Center for Catalysis at Princeton University, Princeton, NJ, USA
| | - Florian Bartels
- Merck Center for Catalysis at Princeton University, Princeton, NJ, USA
| | | | - Xiaoshen Ma
- Department of Discovery Chemistry, Merck & Co., Inc., Boston, MA, USA
| | - Charles S Yeung
- Department of Discovery Chemistry, Merck & Co., Inc., Boston, MA, USA
| | - David J Bennett
- Department of Discovery Chemistry, Merck & Co., Inc., Boston, MA, USA
| | | |
Collapse
|
3
|
Boswell BR, Mansson CMF, Cabrera GE, Hansen CR, Oliver AG, Burns NZ. A Metal-Free Cyclobutadiene Reagent for Intermolecular [4 + 2] Cycloadditions. J Am Chem Soc 2023; 145:5631-5636. [PMID: 36856576 DOI: 10.1021/jacs.3c01591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/02/2023]
Abstract
Cyclobutadiene is a highly reactive antiaromatic hydrocarbon that has fascinated chemists for over 60 years. However, its preparation and uses in chemical synthesis are sparing, in part due to its lengthy synthesis that generates hazardous byproducts including excess heavy metals. Herein, we report a scalable, metal-free cyclobutadiene reagent, diethyldiazabicyclohexene dicarboxylate, and explore its intermolecular [4 + 2] cycloaddition with various electron-deficient alkenes. We also demonstrate its utility in a three-step synthesis of dipiperamide G and a diverse array of product derivatizations including bromocyclobutadiene.
Collapse
Affiliation(s)
- Benjamin R Boswell
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Carl M F Mansson
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Gabrielle E Cabrera
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Calvin R Hansen
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Allen G Oliver
- Department of Chemistry & Biochemistry, University of Notre Dame, Notre Dame, Indiana 46545, United States
| | - Noah Z Burns
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| |
Collapse
|
4
|
Chernykh AV, Kudryk OV, Olifir OS, Dobrydnev AV, Rusanov E, Moskvina VS, Volochnyuk DM, Grygorenko OO. Expanding the Chemical Space of 1,2-Difunctionalized Cyclobutanes. J Org Chem 2023. [PMID: 36780233 DOI: 10.1021/acs.joc.2c02892] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/14/2023]
Abstract
An efficient approach to the synthesis of previously unavailable or hardly accessible 1,2-difunctionalized cyclobutanes (mostly with NH2/NHBoc, OH, SH, or SO2F groups attached to the carbocycle either directly or via a CH2 unit) relying on the divergent strategy is described. This class of compounds provides sp3-enriched and conformationally restricted building blocks that are of special demand for medicinal chemistry. The target compounds were prepared not only as pure racemic (±)-cis- and (±)-trans-diastereomers but in some cases also as single enantiomers. The developed procedures are readily scaled up and allow obtaining the target compounds on an up to hundred-gram scale. On the basis of the results of 20 X-ray diffraction experiments, structural characterization of the 1,2-difunctionalized cyclobutane core was performed using the extended Cremer-Pople puckering parameters and exit vector (EVP) plots.
Collapse
Affiliation(s)
- Anton V Chernykh
- Enamine Ltd. (www.enamine.net), Chervonotkatska Street 78, Kyïv 02094, Ukraine.,Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyïv 01601, Ukraine
| | - Oleksandr V Kudryk
- Enamine Ltd. (www.enamine.net), Chervonotkatska Street 78, Kyïv 02094, Ukraine.,Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyïv 01601, Ukraine
| | - Oleksandr S Olifir
- Enamine Ltd. (www.enamine.net), Chervonotkatska Street 78, Kyïv 02094, Ukraine.,V.P. Kukhar Institute of Bioorganic Chemistry and Petrochemistry at National Academy of Sciences of Ukraine, Akademik Kukhar Street 1, Kyïv 02094, Ukraine
| | - Alexey V Dobrydnev
- Enamine Ltd. (www.enamine.net), Chervonotkatska Street 78, Kyïv 02094, Ukraine.,Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyïv 01601, Ukraine
| | - Eduard Rusanov
- Institute of Organic Chemistry at National Academy of Sciences of Ukraine, Akademik Kukhar Street 5, Kyïv 02094, Ukraine.,Department of Chemistry and Applied Biosciences, ETH Zurich, Vladimir-Prelog-Weg 1-5/10, Zürich 8093, Switzerland
| | - Viktoriia S Moskvina
- Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyïv 01601, Ukraine.,V.P. Kukhar Institute of Bioorganic Chemistry and Petrochemistry at National Academy of Sciences of Ukraine, Akademik Kukhar Street 1, Kyïv 02094, Ukraine
| | - Dmitriy M Volochnyuk
- Enamine Ltd. (www.enamine.net), Chervonotkatska Street 78, Kyïv 02094, Ukraine.,Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyïv 01601, Ukraine.,Institute of Organic Chemistry at National Academy of Sciences of Ukraine, Akademik Kukhar Street 5, Kyïv 02094, Ukraine
| | - Oleksandr O Grygorenko
- Enamine Ltd. (www.enamine.net), Chervonotkatska Street 78, Kyïv 02094, Ukraine.,Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyïv 01601, Ukraine
| |
Collapse
|
5
|
Zhong Q, Wang Y, Lan H, Zhu H, Fan Q. Construction of 3,12-Diazatetracyclododecane-dienes through Unexpected Visible-Light-Induced Radical Cascade Cyclization. J Org Chem 2022; 87:10937-10946. [PMID: 35921484 DOI: 10.1021/acs.joc.2c01225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A novel visible-light-induced cascade radical cyclization reaction of 3-cyano-4-aryl-1,4-dihydropyridines for the construction of 3,12-diazatetracyclododecane-diene derivatives is reported for the first time. In the presence of 410 nm blue LED lamp as the light source and ethanol as the solvent, the reactions proceed smoothly to afford photocyclization products in good yields. The process is carried out through the breaking of original C═C double bonds and the formation of three new single bonds in one pot and proved to be able to tolerate different substituents.
Collapse
Affiliation(s)
- Qidi Zhong
- School of Pharmacy, North China University of Science and Technology, Tangshan, Hebei 063210, China
| | - Yinxin Wang
- School of Pharmacy, North China University of Science and Technology, Tangshan, Hebei 063210, China
| | - Hanyang Lan
- School of Pharmacy, North China University of Science and Technology, Tangshan, Hebei 063210, China
| | - Hao Zhu
- School of Public Health, North China University of Science and Technology, Tangshan, Hebei 063210, China
| | - Qiangwen Fan
- School of Chemistry, Biology and Materials Science, East China University of Technology, Nanchang 330013, China
| |
Collapse
|
6
|
Chen J, Zhou Q, Fang H, Lu P. Dancing on Ropes ‐ Enantioselective Functionalization of Preformed Four‐membered Carbocycles. CHINESE J CHEM 2022. [DOI: 10.1002/cjoc.202100879] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Jun Chen
- Research Center for Molecular Recognition and Synthesis, Department of Chemistry, Fudan University, 220 Handan Lu Shanghai 200433 China
| | - Qiang Zhou
- Research Center for Molecular Recognition and Synthesis, Department of Chemistry, Fudan University, 220 Handan Lu Shanghai 200433 China
| | - Huayi Fang
- School of Materials Science and Engineering, Tianjin Key Lab for Rare Earth Materials and Applications, Nankai University, No 38 Tongyan Road Tianjin 300350 China
| | - Ping Lu
- Research Center for Molecular Recognition and Synthesis, Department of Chemistry, Fudan University, 220 Handan Lu Shanghai 200433 China
| |
Collapse
|
7
|
Cao WB, Jiang S, Li HY, Xu XP, Ji SJ. Synthesis of strained 1,2-diazetidines via [3 + 1] cycloaddition of C,N-cyclic azomethine imines with isocyanides and synthetic derivation. Org Chem Front 2021. [DOI: 10.1039/d1qo00130b] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Strained diazetidines are assembled simply from 1,3-dipolar cycloaddition of isocyanides and C,N-cyclic azomethine imines, and their diversified transformations are presented.
Collapse
Affiliation(s)
- Wen-Bin Cao
- Key Laboratory of Organic Synthesis of Jiangsu Province
- College of Chemistry
- Chemical Engineering and Materials Science & Collaborative Innovation Center of Suzhou Nano Science and Technology
- Soochow University
- Suzhou 215123
| | - Shuai Jiang
- Key Laboratory of Organic Synthesis of Jiangsu Province
- College of Chemistry
- Chemical Engineering and Materials Science & Collaborative Innovation Center of Suzhou Nano Science and Technology
- Soochow University
- Suzhou 215123
| | - Hai-Yan Li
- Analysis and Testing Center
- Soochow University
- Suzhou 215123
- China
| | - Xiao-Ping Xu
- Key Laboratory of Organic Synthesis of Jiangsu Province
- College of Chemistry
- Chemical Engineering and Materials Science & Collaborative Innovation Center of Suzhou Nano Science and Technology
- Soochow University
- Suzhou 215123
| | - Shun-Jun Ji
- Key Laboratory of Organic Synthesis of Jiangsu Province
- College of Chemistry
- Chemical Engineering and Materials Science & Collaborative Innovation Center of Suzhou Nano Science and Technology
- Soochow University
- Suzhou 215123
| |
Collapse
|
8
|
Synthesis of sp3-rich chemical libraries based upon 1,2-diazetidines. Tetrahedron 2021. [DOI: 10.1016/j.tet.2020.131836] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|