1
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Zhang S, Nakata E, Lin P, Morii T. An Artificial Liposome Compartment with Size Exclusion Molecular Transport. Chemistry 2023; 29:e202302093. [PMID: 37668304 DOI: 10.1002/chem.202302093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2023] [Revised: 08/28/2023] [Accepted: 09/04/2023] [Indexed: 09/06/2023]
Abstract
The cellular compartment plays an essential role in organizing the complex and diverse biochemical reactions within the cell. By mimicking the function of such cellular compartments, the challenge of constructing artificial compartments has been taken up to develop new biochemical tools for efficient material production and diagnostics. The important features required for the artificial compartment are that it isolates the interior from the external environment and is further functionalized to control the transport of target chemicals to regulate the interior concentration of both substrate and reaction products. In this study, an artificial compartment with size-selective molecular transport function was constructed by using a DNA origami-guided liposome prepared by modifying the method reported by Perrault et al. This completely isolates the liposome interior, including the DNA origami skeleton, from the external environment and allows the assembly of a defined number of molecules of interest inside and/or outside the compartment. By incorporating a bacterial membrane protein, OmpF, into the liposome, the resulting artificial compartment was shown to transport only the molecule of interest with a molecular weight below 600 Da from the external environment into the interior of the compartment.
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Affiliation(s)
- Shiwei Zhang
- Institute of Advanced Energy, Kyoto University Uji, Kyoto, 6110011, Japan
| | - Eiji Nakata
- Institute of Advanced Energy, Kyoto University Uji, Kyoto, 6110011, Japan
| | - Peng Lin
- Institute of Advanced Energy, Kyoto University Uji, Kyoto, 6110011, Japan
| | - Takashi Morii
- Institute of Advanced Energy, Kyoto University Uji, Kyoto, 6110011, Japan
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2
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Sun Q, Shi J, Sun H, Zhu Y, Du J. Membrane and Lumen-Compartmentalized Polymersomes for Biocatalysis and Cell Mimics. Biomacromolecules 2023; 24:4587-4604. [PMID: 37842883 DOI: 10.1021/acs.biomac.3c00726] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2023]
Abstract
Compartmentalization is a crucial feature of a natural cell, manifested in cell membrane and inner lumen. Inspired by the cellular structure, multicompartment polymersomes (MCPs), including membrane-compartmentalized polymersomes and lumen-compartmentalized polymersomes (polymersomes-in-polymersomes), have aroused great expectations for biological applications such as biocatalysis and cell mimics in the past decades. Compared with traditional polymersomes, MCPs have advantages in encapsulating multiple enzymes separately for multistep enzymatic cascade reactions. In this review, first, the design principles and preparation methods of membrane-compartmentalized and lumen-compartmentalized polymersomes are summarized. Next, recent advances of MCPs as nanoreactors and cell mimics to mimic subcellular organelles or artificial cells are discussed. Finally, the future research directions of MCPs are prospected.
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Affiliation(s)
- Qingmei Sun
- Department of Gynaecology and Obstetrics, Shanghai Key Laboratory of Anesthesiology and Brain Functional Modulation, Clinical Research Center for Anesthesiology and Perioperative Medicine, Translational Research Institute of Brain and Brain-Like Intelligence, Shanghai Fourth People's Hospital, School of Medicine, Tongji University, Shanghai 200434, China
- Department of Polymeric Materials, School of Materials Science and Engineering, Key Laboratory of Advanced Civil Engineering Materials of Ministry of Education, Tongji University, 4800 Caoan Road, Shanghai 201804, China
| | - Junqiu Shi
- Department of Polymeric Materials, School of Materials Science and Engineering, Key Laboratory of Advanced Civil Engineering Materials of Ministry of Education, Tongji University, 4800 Caoan Road, Shanghai 201804, China
| | - Hui Sun
- State Key Laboratory of High-Efficiency Coal Utilization and Green Chemical Engineering, School of Chemistry and Chemical Engineering, Ningxia University, Yinchuan 750021, China
| | - Yunqing Zhu
- Department of Polymeric Materials, School of Materials Science and Engineering, Key Laboratory of Advanced Civil Engineering Materials of Ministry of Education, Tongji University, 4800 Caoan Road, Shanghai 201804, China
| | - Jianzhong Du
- Department of Gynaecology and Obstetrics, Shanghai Key Laboratory of Anesthesiology and Brain Functional Modulation, Clinical Research Center for Anesthesiology and Perioperative Medicine, Translational Research Institute of Brain and Brain-Like Intelligence, Shanghai Fourth People's Hospital, School of Medicine, Tongji University, Shanghai 200434, China
- Department of Polymeric Materials, School of Materials Science and Engineering, Key Laboratory of Advanced Civil Engineering Materials of Ministry of Education, Tongji University, 4800 Caoan Road, Shanghai 201804, China
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3
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Advances in the One-Step Approach of Polymeric Materials Using Enzymatic Techniques. Polymers (Basel) 2023; 15:polym15030703. [PMID: 36772002 PMCID: PMC9922006 DOI: 10.3390/polym15030703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Revised: 01/23/2023] [Accepted: 01/27/2023] [Indexed: 01/31/2023] Open
Abstract
The formulation in which biochemical enzymes are administered in polymer science plays a key role in retaining their catalytic activity. The one-step synthesis of polymers with highly sequence-controlled enzymes is a strategy employed to provide enzymes with higher catalytic activity and thermostability in material sustainability. Enzyme-catalyzed chain growth polymerization reactions using activated monomers, protein-polymer complexation techniques, covalent and non-covalent interaction, and electrostatic interactions can provide means to develop formulations that maintain the stability of the enzyme during complex material processes. Multifarious applications of catalytic enzymes are usually attributed to their efficiency, pH, and temperature, thus, progressing with a critical structure-controlled synthesis of polymer materials. Due to the obvious economics of manufacturing and environmental sustainability, the green synthesis of enzyme-catalyzed materials has attracted significant interest. Several enzymes from microorganisms and plants via enzyme-mediated material synthesis have provided a viable alternative for the appropriate synthesis of polymers, effectively utilizing the one-step approach. This review analyzes more and deeper strategies and material technologies widely used in multi-enzyme cascade platforms for engineering polymer materials, as well as their potential industrial applications, to provide an update on current trends and gaps in the one-step synthesis of materials using catalytic enzymes.
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4
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Li D, Xiong Q, Liang L, Duan H. Multienzyme nanoassemblies: from rational design to biomedical applications. Biomater Sci 2021; 9:7323-7342. [PMID: 34647942 DOI: 10.1039/d1bm01106e] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Multienzyme nanoassemblies (MENAs) that combine the functions of several enzymes into one entity have attracted widespread research interest due to their improved enzymatic performance and great potential for multiple applications. Considerable progress has been made to design and fabricate MENAs in recent years. This review begins with an introduction of the up-to-date strategies in designing MENAs, mainly including substrate channeling, compartmentalization and control of enzyme stoichiometry. The desirable properties that endow MENAs with important applications are also discussed in detail. Then, the recent advances in utilizing MENAs in the biomedical field are reviewed, with a particular focus on biosensing, tumor therapy, antioxidant and drug delivery. Finally, the challenges and perspectives for development of versatile MENAs are summarized.
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Affiliation(s)
- Di Li
- State Key Lab of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China. .,School of Chemical and Biomedical Engineering, Nanyang Technological University, 70 Nanyang Drive, Singapore 637457, Singapore. .,School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Qirong Xiong
- School of Chemical and Biomedical Engineering, Nanyang Technological University, 70 Nanyang Drive, Singapore 637457, Singapore.
| | - Li Liang
- State Key Lab of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China. .,School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, China
| | - Hongwei Duan
- School of Chemical and Biomedical Engineering, Nanyang Technological University, 70 Nanyang Drive, Singapore 637457, Singapore.
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5
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Nazor J, Liu J, Huisman G. Enzyme evolution for industrial biocatalytic cascades. Curr Opin Biotechnol 2021; 69:182-190. [PMID: 33517157 DOI: 10.1016/j.copbio.2020.12.013] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 12/04/2020] [Accepted: 12/15/2020] [Indexed: 12/13/2022]
Abstract
Multi-step, biocatalytic cascades are poised to lead to further adoption of enzymes by the chemical industry. Over the past twenty years, the promise of in vitro enzyme evolution for the sustainable biocatalytic synthesis of complex chemicals at large scale has materialized. Recently, the field of biocatalysis is seeing further expansion, with biocatalytic processes becoming more complex and involving multiple consecutive enzymatic conversions. These biocatalytic cascades are assembled in single reaction vessels to accomplish difficult chemistry under mild reaction conditions, with minimal waste generation and attractive economics. Advances in enzyme engineering have enabled the increasingly efficient optimization of enzymes in the context of such cascades, where each enzyme operates in the presence of others, under continuously changing conditions as substrate, reaction intermediates, and product concentrations fluctuate over the course of the reaction. Enzyme evolution has provided biocatalysts with greatly improved traits, including activity, selectivity, and stability. This review focuses on recently developed, industrially relevant enzyme cascades.
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Affiliation(s)
- Jovana Nazor
- Codexis Inc, 200 Penobscot Drive, Redwood City, CA 94063, United States
| | - Joyce Liu
- Codexis Inc, 200 Penobscot Drive, Redwood City, CA 94063, United States
| | - Gjalt Huisman
- Codexis Inc, 200 Penobscot Drive, Redwood City, CA 94063, United States.
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6
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Armbruster J, Steinmassl M, Müller Bogotá CA, Berg G, Nidetzky B, Dennig A. P450 Jα : A New, Robust and α-Selective Fatty Acid Hydroxylase Displaying Unexpected 1-Alkene Formation. Chemistry 2020; 26:15910-15921. [PMID: 32449211 DOI: 10.1002/chem.201905511] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Revised: 05/14/2020] [Indexed: 01/01/2023]
Abstract
Oxyfunctionalization of fatty acids (FAs) is a key step in the design of novel synthetic pathways for biobased/biodegradable polymers, surfactants and fuels. Here, we show the isolation and characterization of a robust FA α-hydroxylase (P450Jα ) which catalyses the selective conversion of a broad range of FAs (C6:0-C16:0) and oleic acid (C18:1) with H2 O2 as oxidant. Under optimized reaction conditions P450Jα yields α-hydroxy acids all with >95 % regioselectivity, high specific activity (up to 15.2 U mg-1 ) and efficient coupling of oxidant to product (up to 85 %). Lauric acid (C12:0) turned out to be an excellent substrate with respect to productivity (TON=394 min-1 ). On preparative scale, conversion of C12:0 reached 83 % (0.9 g L-1 ) when supplementing H2 O2 in fed-batch mode. Under similar conditions P450Jα allowed further the first biocatalytic α-hydroxylation of oleic acid (88 % conversion on 100 mL scale) at high selectivity and in good yields (1.1 g L-1 ; 79 % isolated yield). Unexpectedly, P450Jα displayed also 1-alkene formation from shorter chain FAs (≤C10:0) showing that oxidative decarboxylation is more widely distributed across this enzyme family than reported previously.
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Affiliation(s)
- Julia Armbruster
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria
| | - Mathilde Steinmassl
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria
| | - Christina A Müller Bogotá
- Austrian Centre of Industrial Biotechnology (acib), Petersgasse 14, 8010, Graz, Austria.,Institute of Environmental Biotechnology, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria
| | - Gabriele Berg
- Austrian Centre of Industrial Biotechnology (acib), Petersgasse 14, 8010, Graz, Austria.,Institute of Environmental Biotechnology, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria
| | - Bernd Nidetzky
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria.,Institute of Environmental Biotechnology, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria
| | - Alexander Dennig
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria.,Institute of Environmental Biotechnology, Graz University of Technology, NAWI Graz, Petersgasse 12, 8010, Graz, Austria
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7
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Wiltschi B, Cernava T, Dennig A, Galindo Casas M, Geier M, Gruber S, Haberbauer M, Heidinger P, Herrero Acero E, Kratzer R, Luley-Goedl C, Müller CA, Pitzer J, Ribitsch D, Sauer M, Schmölzer K, Schnitzhofer W, Sensen CW, Soh J, Steiner K, Winkler CK, Winkler M, Wriessnegger T. Enzymes revolutionize the bioproduction of value-added compounds: From enzyme discovery to special applications. Biotechnol Adv 2020; 40:107520. [DOI: 10.1016/j.biotechadv.2020.107520] [Citation(s) in RCA: 55] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Revised: 10/18/2019] [Accepted: 01/13/2020] [Indexed: 12/11/2022]
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8
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Li G, Lian J, Xue H, Jiang Y, Ju S, Wu M, Lin J, Yang L. Biocascade Synthesis of L-Tyrosine Derivatives by Coupling a Thermophilic Tyrosine Phenol-Lyase and L-Lactate Oxidase. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000061] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Guosi Li
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Jiazhang Lian
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Hailong Xue
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Yiqi Jiang
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Shuyun Ju
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Mianbin Wu
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Jianping Lin
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
| | - Lirong Yang
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education; College of Chemical and Biological Engineering; Zhejiang University; 310027 Hangzhou China
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9
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Wang J, Song W, Wu J, Liu J, Chen X, Liu L. Efficient production of phenylpropionic acids by an amino-group-transformation biocatalytic cascade. Biotechnol Bioeng 2019; 117:614-625. [PMID: 31803933 DOI: 10.1002/bit.27241] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Revised: 11/06/2019] [Accepted: 11/24/2019] [Indexed: 11/08/2022]
Abstract
Phenylpropionic acids are commonly used in the synthesis of pharmaceuticals, cosmetics, and fine chemicals. However, the synthesis of phenylpropionic acids faces the challenges of high cost of substrates and a limited range of products. Here, we present an artificially designed amino-group-transformation biocatalytic process, which uses simple phenols, pyruvate, and ammonia to synthesize diverse phenylpropionic acids. This biocatalytic cascade comprises an amino-group-introduction module and three amino-group-transformation modules, and operates in a modular assembly manner. Escherichia coli catalysts coexpressing enzymes from different modules achieve whole-cell simultaneous one-pot transformations of phenols into the corresponding phenylpropionic acids including (S)-α-amino acids, α-keto acids, (R)-α-amino acids, and (R)-β-amino acids. With cofactor recycling, protein engineering, and transformation optimization, four (S)-α-amino acids, four α-keto acids, four (R)-α-amino acids, and four (R)-β-amino acids are synthesized with good conversion (68-99%) and high enantioselectivities (>98%). Therefore, the amino-group-transformation concept provides a universal and efficient tool for synthesizing diverse products.
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Affiliation(s)
- Jinhui Wang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China.,Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi, China
| | - Wei Song
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China.,Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi, China
| | - Jing Wu
- School of Pharmaceutical Sciences, Jiangnan University, Wuxi, China
| | - Jia Liu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China.,Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi, China
| | - Xiulai Chen
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China.,Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi, China
| | - Liming Liu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China.,Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi, China.,National Engineering Laboratory for Cereal Fermentation Technology, Jiangnan University, Wuxi, China
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10
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Martínez-Montero L, Schrittwieser JH, Kroutil W. Regioselective Biocatalytic Transformations Employing Transaminases and Tyrosine Phenol Lyases. Top Catal 2018. [DOI: 10.1007/s11244-018-1054-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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11
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Artificial Biocatalytic Linear Cascades to Access Hydroxy Acids, Lactones, and α- and β-Amino Acids. Catalysts 2018. [DOI: 10.3390/catal8050205] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
α-, β-, and ω-Hydroxy acids, amino acids, and lactones represent common building blocks and intermediates for various target molecules. This review summarizes artificial cascades published during the last 10 years leading to these products. Renewables as well as compounds originating from fossil resources have been employed as starting material. The review provides an inspiration for new cascade designs and may be the basis to design variations of these cascades starting either from alternative substrates or extending them to even more sophisticated products.
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12
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Affiliation(s)
- Shuke Wu
- Department of Chemical and Biomolecular Engineering; National University of Singapore; 4 Engineering Drive 4 Singapore 117585 Singapore
| | - Zhi Li
- Department of Chemical and Biomolecular Engineering; National University of Singapore; 4 Engineering Drive 4 Singapore 117585 Singapore
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13
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Affiliation(s)
- Josef M. Sperl
- Chair of Chemistry of Biogenic
Resources, Technical University of Munich, Campus Straubing for Biotechnology
and Sustainability, Schulgasse 16, 94315 Straubing, Germany
| | - Volker Sieber
- Chair of Chemistry of Biogenic
Resources, Technical University of Munich, Campus Straubing for Biotechnology
and Sustainability, Schulgasse 16, 94315 Straubing, Germany
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14
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Wu S, Liu J, Li Z. Biocatalytic Formal Anti-Markovnikov Hydroamination and Hydration of Aryl Alkenes. ACS Catal 2017. [DOI: 10.1021/acscatal.7b01464] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Shuke Wu
- Department of Chemical
and
Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, Singapore 117585, Singapore
| | - Ji Liu
- Department of Chemical
and
Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, Singapore 117585, Singapore
| | - Zhi Li
- Department of Chemical
and
Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, Singapore 117585, Singapore
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15
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Albarrán-Velo J, González-Martínez D, Gotor-Fernández V. Stereoselective biocatalysis: A mature technology for the asymmetric synthesis of pharmaceutical building blocks. BIOCATAL BIOTRANSFOR 2017. [DOI: 10.1080/10242422.2017.1340457] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Jesús Albarrán-Velo
- Organic and Inorganic Chemistry Department, Biotechnology Institute of Asturias (IUBA), University of Oviedo, Oviedo, Spain
| | - Daniel González-Martínez
- Organic and Inorganic Chemistry Department, Biotechnology Institute of Asturias (IUBA), University of Oviedo, Oviedo, Spain
| | - Vicente Gotor-Fernández
- Organic and Inorganic Chemistry Department, Biotechnology Institute of Asturias (IUBA), University of Oviedo, Oviedo, Spain
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16
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Żądło-Dobrowolska A, Koszelewski D, Paprocki D, Madej A, Wilk M, Ostaszewski R. Enzyme-Promoted Asymmetric Tandem Passerini Reaction. ChemCatChem 2017. [DOI: 10.1002/cctc.201700427] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Anna Żądło-Dobrowolska
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
| | - Dominik Koszelewski
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
| | - Daniel Paprocki
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
| | - Arleta Madej
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
| | - Monika Wilk
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
| | - Ryszard Ostaszewski
- Institute of Organic Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
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17
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Schrittwieser JH, Velikogne S, Hall M, Kroutil W. Artificial Biocatalytic Linear Cascades for Preparation of Organic Molecules. Chem Rev 2017; 118:270-348. [DOI: 10.1021/acs.chemrev.7b00033] [Citation(s) in RCA: 371] [Impact Index Per Article: 53.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Joerg H. Schrittwieser
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Stefan Velikogne
- ACIB
GmbH, Department of Chemistry, University of Graz, Heinrichstrasse
28, 8010 Graz, Austria
| | - Mélanie Hall
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Wolfgang Kroutil
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
- ACIB
GmbH, Department of Chemistry, University of Graz, Heinrichstrasse
28, 8010 Graz, Austria
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18
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Klermund L, Poschenrieder ST, Castiglione K. Biocatalysis in Polymersomes: Improving Multienzyme Cascades with Incompatible Reaction Steps by Compartmentalization. ACS Catal 2017. [DOI: 10.1021/acscatal.7b00776] [Citation(s) in RCA: 75] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Ludwig Klermund
- Institute of Biochemical
Engineering, Technical University of Munich, Boltzmannstr. 15, 85748 Garching, Germany
| | - Sarah T. Poschenrieder
- Institute of Biochemical
Engineering, Technical University of Munich, Boltzmannstr. 15, 85748 Garching, Germany
| | - Kathrin Castiglione
- Institute of Biochemical
Engineering, Technical University of Munich, Boltzmannstr. 15, 85748 Garching, Germany
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19
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Zhou Y, Wu S, Li Z. Cascade Biocatalysis for Sustainable Asymmetric Synthesis: From Biobased l-Phenylalanine to High-Value Chiral Chemicals. Angew Chem Int Ed Engl 2016; 55:11647-50. [PMID: 27512928 DOI: 10.1002/anie.201606235] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2016] [Indexed: 11/08/2022]
Abstract
Sustainable synthesis of useful and valuable chiral fine chemicals from renewable feedstocks is highly desirable but remains challenging. Reported herein is a designed and engineered set of unique non-natural biocatalytic cascades to achieve the asymmetric synthesis of chiral epoxide, diols, hydroxy acid, and amino acid in high yield and with excellent ee values from the easily available biobased l-phenylalanine. Each of the cascades was efficiently performed in one pot by using the cells of a single recombinant strain over-expressing 4-10 different enzymes. The cascade biocatalysis approach is promising for upgrading biobased bulk chemicals to high-value chiral chemicals. In addition, combining the non-natural enzyme cascades with the natural metabolic pathway of the host strain enabled the fermentative production of the chiral fine chemicals from glucose.
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Affiliation(s)
- Yi Zhou
- Synthetic Biology for Clinical and Technological Innovation (SynCTI), Life Sciences Institute, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore
| | - Shuke Wu
- Synthetic Biology for Clinical and Technological Innovation (SynCTI), Life Sciences Institute, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore.,Department of Chemical and Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, Singapore, 117585, Singapore
| | - Zhi Li
- Synthetic Biology for Clinical and Technological Innovation (SynCTI), Life Sciences Institute, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore. .,Department of Chemical and Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, Singapore, 117585, Singapore.
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20
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Zhou Y, Wu S, Li Z. Cascade Biocatalysis for Sustainable Asymmetric Synthesis: From Biobasedl-Phenylalanine to High-Value Chiral Chemicals. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201606235] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Yi Zhou
- Synthetic Biology for Clinical and Technological Innovation (SynCTI); Life Sciences Institute; National University of Singapore; 28 Medical Drive Singapore 117456 Singapore
| | - Shuke Wu
- Synthetic Biology for Clinical and Technological Innovation (SynCTI); Life Sciences Institute; National University of Singapore; 28 Medical Drive Singapore 117456 Singapore
- Department of Chemical and Biomolecular Engineering; National University of Singapore; 4 Engineering Drive 4 Singapore 117585 Singapore
| | - Zhi Li
- Synthetic Biology for Clinical and Technological Innovation (SynCTI); Life Sciences Institute; National University of Singapore; 28 Medical Drive Singapore 117456 Singapore
- Department of Chemical and Biomolecular Engineering; National University of Singapore; 4 Engineering Drive 4 Singapore 117585 Singapore
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Schmidt-Dannert C, Lopez-Gallego F. A roadmap for biocatalysis - functional and spatial orchestration of enzyme cascades. Microb Biotechnol 2016; 9:601-9. [PMID: 27418373 PMCID: PMC4993178 DOI: 10.1111/1751-7915.12386] [Citation(s) in RCA: 97] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2016] [Accepted: 06/25/2016] [Indexed: 12/23/2022] Open
Abstract
Advances in biological engineering and systems biology have provided new approaches and tools for the industrialization of biology. In the next decade, advanced biocatalytic systems will increasingly be used for the production of chemicals that cannot be made by current processes and/or where the use of enzyme catalysts is more resource efficient with a much reduced environmental impact. We expect that in the future, manufacture of chemicals and materials will utilize both biocatalytic and chemical synthesis synergistically. The realization of such advanced biomanufacturing processes currently faces a number of major challenges. Ready‐to‐deploy portfolios of biocatalysts for design to production must be created from biological diverse sources and through protein engineering. Robust and efficient multi‐step enzymatic reaction cascades must be developed that can operate simultaneously in one‐pot. For this to happen, bio‐orthogonal strategies for spatial and temporal control of biocatalyst activities must be developed. Promising approaches and technologies are emerging that will eventually lead to the design of in vitro biocatalytic systems that mimic the metabolic pathways and networks of cellular systems which will be discussed in this roadmap.
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Affiliation(s)
- Claudia Schmidt-Dannert
- Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, 140 Gortner Laboratory, 1479 Gortner Avenue, St. Paul, MN, 55108, USA
| | - Fernando Lopez-Gallego
- Heterogeneous Biocatalysis Group, CIC BiomaGUNE, Pase Miramon 182, San Sebastian-Donostia, Spain.,Ikerbasque, Basque Foundation for Science, Bilbao, Spain
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Sheng B, Xu J, Ge Y, Zhang S, Wang D, Gao C, Ma C, Xu P. Enzymatic Resolution by ad-Lactate Oxidase Catalyzed Reaction for (S)-2-Hydroxycarboxylic Acids. ChemCatChem 2016. [DOI: 10.1002/cctc.201600536] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Binbin Sheng
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
- School of Environmental Science and Engineering; Sun Yat-sen University, Guangzhou 510275 (China)
| | - Jing Xu
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
| | - Yongsheng Ge
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
| | - Shuo Zhang
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
| | - Danqi Wang
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
| | - Chao Gao
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
| | - Cuiqing Ma
- State Key Lab of Microbial Technology; Shandong University; 27 Shanda South Road Jinan 250100 China
| | - Ping Xu
- State Key Laboratory of Microbial Metabolism and; School of Life Sciences and Biotechnology; Shanghai Jiao Tong University; 800 Dongchuan Road Shanghai 200240 China
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