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Oyadomari Y, Goto Y, Suganuma K, Kawazu SI, Becking LE, Fusetani N, Nakao Y. Aurantoside L, a New Tetramic Acid Glycoside with Anti-Leishmanial Activity Isolated from the Marine Sponge Siliquariaspongia japonica. Mar Drugs 2024; 22:171. [PMID: 38667788 PMCID: PMC11050911 DOI: 10.3390/md22040171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 04/04/2024] [Accepted: 04/05/2024] [Indexed: 04/28/2024] Open
Abstract
A new tetramic acid glycoside, aurantoside L (1), was isolated from the sponge Siliquariaspongia japonica collected at Tsushima Is., Nagasaki Prefecture, Japan. The structure of aurantoside L (1) composed of a tetramic acid bearing a chlorinated polyene system and a trisaccharide part was elucidated using spectral analysis. Aurantoside L (1) showed anti-parasitic activity against L. amazonensis with an IC50 value of 0.74 µM.
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Affiliation(s)
- Yasumoto Oyadomari
- Department of Chemistry and Biochemistry, Graduate School of Advanced Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan;
| | - Yasuyuki Goto
- Graduate School of Agricultural and Life Science, The University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan;
| | - Keisuke Suganuma
- National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro 080-8555, Japan; (K.S.); (S.-i.K.)
| | - Shin-ichiro Kawazu
- National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro 080-8555, Japan; (K.S.); (S.-i.K.)
| | - Leontine E. Becking
- Aquaculture & Fisheries Group, Wageningen University & Research, P.O. Box 338, Bode 32, 6700 AH Wageningen, The Netherlands;
- Naturalis Biodiversity Center, Darwinweg 2, 23333 CR Leiden, The Netherlands
| | - Nobuhiro Fusetani
- Research Institute for Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan;
| | - Yoichi Nakao
- Department of Chemistry and Biochemistry, Graduate School of Advanced Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan;
- Research Institute for Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan;
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Al-Salihi SAA, Alberti F. Genomic Based Analysis of the Biocontrol Species Trichoderma harzianum: A Model Resource of Structurally Diverse Pharmaceuticals and Biopesticides. J Fungi (Basel) 2023; 9:895. [PMID: 37755004 PMCID: PMC10532697 DOI: 10.3390/jof9090895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 08/03/2023] [Accepted: 08/06/2023] [Indexed: 09/28/2023] Open
Abstract
Fungi represents a rich repository of taxonomically restricted, yet chemically diverse, secondary metabolites that are synthesised via specific metabolic pathways. An enzyme's specificity and biosynthetic gene clustering are the bottleneck of secondary metabolite evolution. Trichoderma harzianum M10 v1.0 produces many pharmaceutically important molecules; however, their specific biosynthetic pathways remain uncharacterised. Our genomic-based analysis of this species reveals the biosynthetic diversity of its specialised secondary metabolites, where over 50 BGCs were predicted, most of which were listed as polyketide-like compounds associated clusters. Gene annotation of the biosynthetic candidate genes predicted the production of many medically/industrially important compounds including enterobactin, gramicidin, lovastatin, HC-toxin, tyrocidine, equisetin, erythronolide, strobilurin, asperfuranone, cirtinine, protoilludene, germacrene, and epi-isozizaene. Revealing the biogenetic background of these natural molecules is a step forward towards the expansion of their chemical diversification via engineering their biosynthetic genes heterologously, and the identification of their role in the interaction between this fungus and its biotic/abiotic conditions as well as its role as bio-fungicide.
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Affiliation(s)
| | - Fabrizio Alberti
- School of Life Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK
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3
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Zhang Y, Liao G, Wang M, Zhang Z, Liu L, Song Y, Wang D, Hao T, Feng J, Xia B, Wang Y, Tang X, Chen Y. Human-associated bacteria adopt an unusual route for synthesizing 3-acetylated tetramates for environmental adaptation. MICROBIOME 2023; 11:97. [PMID: 37147735 PMCID: PMC10161427 DOI: 10.1186/s40168-023-01548-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Accepted: 04/11/2023] [Indexed: 05/07/2023]
Abstract
BACKGROUND Tetramates or tetramic acid-containing compounds (TACs) are a group of bioactive natural products featuring a pyrrolidine-2,4-dione ring acknowledged being closed via Dieckmann cyclization. The cariogenic Streptococcus mutans strains bearing a muc biosynthetic gene cluster (BGC) can synthesize mutanocyclin (MUC), a 3-acetylated TAC that can inhibit both leukocyte chemotaxis and filamentous development in Candida albicans. Some strains can also accumulate reutericyclins (RTCs), the intermediates of MUC biosynthesis with antibacterial activities. However, the formation mechanism of the pyrrolidine-2,4-dione ring of MUC and the distribution of muc-like BGCs along with their ecological functions has not been explored extensively. RESULTS We demonstrated that a key intermediate of MUC biosynthesis, M-307, is installed by a hybrid nonribosomal peptide synthetase-polyketide synthase assembly line and its pyrrolidine-2,4-dione ring is closed via an unprecedented lactam bond formation style. Subsequent C-3 acetylation will convert M-307 to RTCs, which is then hydrolyzed by a deacylase, MucF, to remove the N-1 fatty acyl appendage to generate MUC. Distribution analysis showed that the muc-like BGCs distribute predominantly in human-associated bacteria. Interestingly, most of the muc-like BGCs possessing a mucF gene were isolated from human or livestock directly, indicating their involvement in alleviating the host's immune attacks by synthesizing MUC; while those BGCs lacking mucF gene distribute mainly in bacteria from fermented products, suggesting that they tend to synthesize RTCs to compete with neighboring bacteria. It is noteworthy that many bacteria in the same habitats (e.g., the oral cavity) lack the muc-like BGC, but possess functional MucF homologues to "detoxify" RTCs to MUC, including several competitive bacteria of S. mutans. We also comparably studied the distribution of TAS1, a fungal enzyme responsible for the production of phytotoxic tenuazonic acids (TeAs), a class of 3-acetylated TACs with similar structure but distinct biosynthetic mechanism to MUC, and found that it mainly exists in plants or crops. CONCLUSIONS The in vivo and in vitro experiments revealed that the pyrrolidine-2,4-dione ring of MUC is closed via lactam bond formation, which may be adopted by many TACs without 3-acyl decorations. Besides, we found that muc-like BGCs are widespread in human-associated bacteria and their shapes and main products can be influenced by the habitat environment and vice versa. By comparing with TeAs, we provided thought-provoking insights into how ecological and evolutionary forces drive bacteria and fungi to construct a common 3-acetylated pyrrolidine-2,4-dione core through different routes, and how the biosynthetic processes are delicately controlled to generate diverse 3-acetylated TACs for environmental adaptation. Video Abstract.
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Affiliation(s)
- Yuwei Zhang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ge Liao
- Institute of Chemical Biology, Shenzhen Bay Laboratory, 518132, Shenzhen, China
| | - Min Wang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen, 529020, Guangdong, China
| | - Zhao Zhang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- Renal Division, Peking University First Hospital, Peking University Institute of Nephrology, Beijing, 100034, China
| | - Liwei Liu
- Department of Marine Pharmacy, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo, 315211, China
| | - Yuqin Song
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Dacheng Wang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Tingting Hao
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jie Feng
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Bin Xia
- Department of Pediatric Dentistry, Peking University School and Hospital of Stomatology, Beijing, 100081, China
| | - Yixiang Wang
- Central Laboratory Peking University School and Hospital of Stomatology, Beijing, 100081, China
| | - Xiaoyu Tang
- Institute of Chemical Biology, Shenzhen Bay Laboratory, 518132, Shenzhen, China.
| | - Yihua Chen
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
- University of Chinese Academy of Sciences, Beijing, 100049, China.
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tert-Butyl 2-Amino-3-cyano-5-oxo-4-phenyl-5,7-dihydropyrano[2,3-c]pyrrole-6(4H)-carboxylate. MOLBANK 2023. [DOI: 10.3390/m1575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
Organocatalyzed synthesis of tert-butyl 2-amino-3-cyano-5-oxo-4-phenyl-5,7-dihydropyrano[2,3-c]pyrrole-6(4H)-carboxylate, prepared from Boc-tetramic acid and benzylidenemalononitrile, is disclosed. Two bifunctional noncovalent organocatalysts were employed, yielding the product as a racemic mixture in both cases. The structure of the new synthesized compound was confirmed by high resolution mass-spectrometry, 1H- and 13C-NMR, HSQC, and IR spectroscopy.
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5
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Song Z, Sun YJ, Xu S, Li G, Yuan C, Zhou K. Secondary metabolites from the Endophytic fungi Fusarium decemcellulare F25 and their antifungal activities. Front Microbiol 2023; 14:1127971. [PMID: 36819056 PMCID: PMC9929939 DOI: 10.3389/fmicb.2023.1127971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Accepted: 01/17/2023] [Indexed: 02/05/2023] Open
Abstract
Seven new compounds, including three isocoumarins (1-3), three pyrrolidinone derivatives (8-10), and one pentaene diacid (15), together with 13 known compounds, were isolated from the rice culture of the endophytic fungus Fusarium decemcellulare F25. Their structures and stereochemistry were established using HRESIMS, NMR, electronic circular dichroism (ECD) calculations, and single-crystal X-ray diffraction. The possible biosynthetic pathways for compounds 1-3 and 8-10 were proposed. The antifungal efficacies of compounds 1 - 20 were evaluated against Colletotrichum musae, and compounds 13, 14, and 17 exhibited inhibitory activities against C. musae with MIC values of 256, 64 and 128 μg/mL, respectively.
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Affiliation(s)
- Ziwei Song
- School of Pharmaceutical Sciences, Guizhou University, Guiyang, China,Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region, Ministry of Education, Guizhou University, Guiyang, China
| | - Yan Jun Sun
- Department of Natural Medicinal Chemistry and Pharmacognosy, School of Pharmacy, Qingdao University, Qingdao, China
| | - Shuangyu Xu
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Medical University, Guiyang, China
| | - Gang Li
- Department of Natural Medicinal Chemistry and Pharmacognosy, School of Pharmacy, Qingdao University, Qingdao, China,*Correspondence: Gang Li, ; Chunmao Yuan, ; Kang Zhou,
| | - Chunmao Yuan
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Medical University, Guiyang, China,*Correspondence: Gang Li, ; Chunmao Yuan, ; Kang Zhou,
| | - Kang Zhou
- School of Pharmaceutical Sciences, Guizhou University, Guiyang, China,Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region, Ministry of Education, Guizhou University, Guiyang, China,*Correspondence: Gang Li, ; Chunmao Yuan, ; Kang Zhou,
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6
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Liu X, Wen S, You W, Wang X, Li QX, Bian Q, Lv P, Hua R. Efficient Total Synthesis and Herbicidal Activity of 3-Acyltetramic Acids: Endogenous Abscisic Acid Synthesis Regulators. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:13510-13517. [PMID: 36251501 DOI: 10.1021/acs.jafc.2c04382] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
An efficient synthesis method will allow a large number of tetramic acid analogues to be synthesized for property and potency optimization. In this study, a facile and efficient method was described for the synthesis of 3-acyltetramic acids. The synthesis was accomplished mainly via (1) mild intramolecular cyclization and (2) the formation of β-ketoamides between nucleophiles and acyl Meldrum's acids. 3-Acyltetramic acid exhibited phytotoxicity against Echinochloa crusgalli and Portulaca oleracea. At a dosage of 750 g ha-1, 6k and 6a showed high herbicidal activity against E. crusgalli, Digitaria sanguinalis and P. oleracea, Amaranthus retroflexus, respectively. 6k inhibited the synthesis of endogenous abscisic acid, thus seedling germination and plant growth. The incorporation of various acyl Meldrum's acids and amino acid esters was applicable to the parallel synthesis of 3-acyltetramic acids. The mode of action and herbicidal activity indicate that 3-tetramic acid had good herbicidal performance and was a promising herbicide candidate. This study will provide a reference for novel herbicide development.
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Affiliation(s)
- Xiankun Liu
- Key Laboratory of Agri-Food Safety of Anhui Province, School of Resource & Environment, Anhui Agricultural University, 130 Changjiangxi Road, Hefei, Anhui230036, China
| | - Shiqiang Wen
- Key Laboratory of Agri-Food Safety of Anhui Province, School of Resource & Environment, Anhui Agricultural University, 130 Changjiangxi Road, Hefei, Anhui230036, China
| | - Weichen You
- Key Laboratory of Agri-Food Safety of Anhui Province, School of Resource & Environment, Anhui Agricultural University, 130 Changjiangxi Road, Hefei, Anhui230036, China
| | - Xiaofei Wang
- Key Laboratory of Agri-Food Safety of Anhui Province, School of Resource & Environment, Anhui Agricultural University, 130 Changjiangxi Road, Hefei, Anhui230036, China
| | - Qing X Li
- Department of Molecular Biosciences and Bioengineering, University of Hawaii at Manoa, 1955 East-West Road, Honolulu, Hawaii96822, United States
| | - Qiang Bian
- National Pesticide Engineering Research Center (Tianjin), Nankai University, Tianjin300071, China
| | - Pei Lv
- Key Laboratory of Agri-Food Safety of Anhui Province, School of Resource & Environment, Anhui Agricultural University, 130 Changjiangxi Road, Hefei, Anhui230036, China
- Anhui Province Key Laboratory of Pollutant Sensitive Materials and Environmental Remediation, Huaibei Normal University, Huaibei, Anhui235000, China
| | - Rimao Hua
- Key Laboratory of Agri-Food Safety of Anhui Province, School of Resource & Environment, Anhui Agricultural University, 130 Changjiangxi Road, Hefei, Anhui230036, China
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7
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Evans DA, Beiger JJ, Burch JD, Fuller PH, Glorius F, Kattnig E, Thaisrivongs DA, Trenkle WC, Young JM, Zhang J. Total Synthesis of Aflastatin A. J Am Chem Soc 2022; 144:19953-19972. [PMID: 36269121 DOI: 10.1021/jacs.2c08244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The total syntheses of aflastatin A and its C3-C48 degradation fragment (6a, R = H) have been accomplished. The syntheses feature several complex diastereoselective fragment couplings, including a Felkin-selective trityl-catalyzed Mukaiyama aldol reaction, a chelate-controlled aldol reaction involving soft enolization with magnesium, and an anti-Felkin-selective boron-mediated oxygenated aldol reaction. Careful comparison of the spectroscopic data for the synthetic C3-C48 degradation fragment to that reported by the isolation group revealed a structural misassignment in the lactol region of the naturally derived degradation product. Ultimately, the data reported for the naturally derived aflastatin A C3-C48 degradation lactol (6a, R = H) were attributed to its derivative lactol trideuteriomethyl ether (6c, R = CD3). Additionally, the revised absolute configurations of six stereogenic centers (C8, C9, and C28-C31) were confirmed.
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Affiliation(s)
- David A Evans
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Jason J Beiger
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Jason D Burch
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Peter H Fuller
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Frank Glorius
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Egmont Kattnig
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - David A Thaisrivongs
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - William C Trenkle
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Joseph M Young
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Jing Zhang
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States
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8
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Saney L, Christensen KE, Li X, Genov M, Pretsch A, Pretsch D, Moloney MG. Tetramate Derivatives by Chemoselective Dieckmann Ring Closure of threo-Phenylserines and Their Antibacterial Activity. J Org Chem 2022; 87:12240-12249. [PMID: 36052923 PMCID: PMC9486951 DOI: 10.1021/acs.joc.2c01382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
![]()
A general route, which provides direct access to substituted
bicyclic
tetramates, making use of Dieckmann cyclization of oxazolidines derived
from threo-arylserines, is reported; the latter were
found to be available by an efficient aldol-like reaction of glycine
with some substituted benzaldehydes under alkaline conditions. The
tetramates were found to release chelated metal cations acquired during
chromatographic purification by mild acid wash. Some compounds in
the library showed good antibacterial activity against Gram-positive
bacteria. Cheminformatic analysis demonstrates that the most active
compounds were Ro5-compliant and occupy a narrow region of chemical
space, distinct from that occupied by other known antibiotics, with
the most potent compounds having 399 < Mw < 530 Da;
3.5 < cLogP < 6.6; 594 < MSA <818 Å2; 9.6 < rel. PSA <13.3%. MIC values were shifted to
higher concentrations when tested in the presence of HSA or blood,
but was not completely abolished, consistent with a plasma protein
binding (PPB) effect.
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Affiliation(s)
- Liban Saney
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K
| | - Kirsten E Christensen
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K
| | - Xiang Li
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K.,Department of Pharmaceutical Engineering, China Pharmaceutical University, Nanjing 211198, P. R. China
| | - Miroslav Genov
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Alexander Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Dagmar Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Mark G Moloney
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K.,Oxford Suzhou Centre for Advanced Research, Suzhou Industrial Park, Building A, 388 Ruo Shui Road, Jiangsu 215123, P.R. China
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9
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Hansen KA, Kim RR, Lawton ES, Tran J, Lewis SK, Deol AS, Van Arnam EB. Bacterial Associates of a Desert Specialist Fungus-Growing Ant Antagonize Competitors with a Nocamycin Analog. ACS Chem Biol 2022; 17:1824-1830. [PMID: 35730734 DOI: 10.1021/acschembio.2c00187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Fungus-growing ants are defended by antibiotic-producing bacterial symbionts in the genus Pseudonocardia. Nutrients provisioned by the ants support these symbionts but also invite colonization and competition from other bacteria. As an arena for chemically mediated bacterial competition, this niche offers a window into ecological antibiotic function with well-defined competing organisms. From multiple colonies of the desert specialist ant Trachymyrmex smithi, we isolated Amycolatopsis bacteria that inhibit the growth of Pseudonocardia symbionts under laboratory conditions. Using bioassay-guided fractionation, we discovered a novel analog of the antibiotic nocamycin that is responsible for this antagonism. We identified the biosynthetic gene cluster for this antibiotic, which has a suite of oxidative enzymes consistent with this molecule's more extensive oxidative tailoring relative to similar tetramic acid antibiotics. High genetic similarity to globally distributed soil Amycolatopsis isolates suggest that this ant-derived Amycolatopsis strain may be an opportunistic soil strain whose antibiotic production allows for competition in this specialized niche. This nocamycin analog adds to the catalog of novel bioactive molecules isolated from bacterial associates of fungus-growing ants, and its activity against ant symbionts represents, to our knowledge, the first putative ecological function for the widely distributed enoyl tetramic acid family of antibiotics.
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Affiliation(s)
- Katherine A Hansen
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
| | - Rose R Kim
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
| | - Elisabeth S Lawton
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
| | - Janet Tran
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
| | - Stephanie K Lewis
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
| | - Arjan S Deol
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
| | - Ethan B Van Arnam
- Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California 91711, United States
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10
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Marques CS, Carreiro EP, Teixeira APS. Multicomponent Synthesis of Heterocycles. HETEROCYCLES 2022. [DOI: 10.1002/9783527832002.ch7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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11
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Watanabe K, Sato M, Osada H. Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels-Alderases. Fungal Biol Biotechnol 2022; 9:9. [PMID: 35488322 PMCID: PMC9055775 DOI: 10.1186/s40694-022-00139-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Accepted: 04/15/2022] [Indexed: 11/19/2022] Open
Abstract
The Diels–Alder (DA) reaction refers to a [4 + 2] cycloaddition reaction that falls under the category of pericyclic reactions. It is a reaction that allows regio- and stereo-selective construction of two carbon–carbon bonds simultaneously in a concerted manner to generate a six-membered ring structure through a six-electron cyclic transition state. The DA reaction is one of the most widely applied reactions in organic synthesis, yet its role in biological systems has been debated intensely over the last four decades. A survey of secondary metabolites produced by microorganisms suggests strongly that many of the compounds possess features that are likely formed through DA reactions, and most of them are considered to be catalyzed by enzymes that are commonly referred to as Diels–Alderases (DAases). In recent years, especially over the past 10 years or so, we have seen an accumulation of a substantial body of work that substantiates the argument that DAases indeed exist and play a critical role in the biosynthesis of complex metabolites. This review will cover the DAases involved in the biosynthesis of decalin moieties, which are found in many of the medicinally important natural products, especially those produced by fungi. In particular, we will focus on a subset of secondary metabolites referred to as pyrrolidine-2-one-bearing decalin compounds and discuss the decalin ring stereochemistry and the biological activities of those compounds. We will also look into the genes and enzymes that drive the biosynthetic construction of those complex natural products, and highlight the recent progress made on the structural and mechanistic understanding of DAases, especially regarding how those enzymes exert stereochemical control over the [4 + 2] cycloaddition reactions they catalyze.
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Affiliation(s)
- Kenji Watanabe
- Department of Pharmaceutical Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan.
| | - Michio Sato
- Department of Pharmaceutical Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan
| | - Hiroyuki Osada
- Department of Pharmaceutical Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan. .,Chemical Resource Development Research Unit, RIKEN Center for Sustainable Resource Science, Wako-shi, 351-0198, Japan.
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12
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New 3-Acyl Tetramic Acid Derivatives from the Deep-Sea-Derived Fungus Lecanicillium fusisporum. Mar Drugs 2022; 20:md20040255. [PMID: 35447928 PMCID: PMC9031249 DOI: 10.3390/md20040255] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 04/04/2022] [Accepted: 04/04/2022] [Indexed: 11/16/2022] Open
Abstract
Seven rare C3-C6 reduced 3-acyl tetramic acid derivatives, lecanicilliumins A–G (1–7), along with the known analogue cladosporiumin D (8), were obtained from the extract of the deep-sea-derived fungus Lecanicillium fusisporum GXIMD00542 within the family Clavipitacae. Their structures were elucidated by extensive spectroscopic data analysis, quantum chemistry calculations and chemical reaction. Compounds 1, 2, 5–7 exhibited moderate anti-inflammatory activity against NF-κB production using lipopolysaccharide (LPS) induced RAW264.7 cells with EC50 values range of 18.49–30.19 μM.
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Wang H, Guo Y, Luo Z, Gao L, Li R, Zhang Y, Kalaji HM, Qiang S, Chen S. Recent Advances in Alternaria Phytotoxins: A Review of Their Occurrence, Structure, Bioactivity and Biosynthesis. J Fungi (Basel) 2022; 8:jof8020168. [PMID: 35205922 PMCID: PMC8878860 DOI: 10.3390/jof8020168] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 02/06/2022] [Accepted: 02/07/2022] [Indexed: 12/04/2022] Open
Abstract
Alternaria is a ubiquitous fungal genus in many ecosystems, consisting of species and strains that can be saprophytic, endophytic, or pathogenic to plants or animals, including humans. Alternaria species can produce a variety of secondary metabolites (SMs), especially low molecular weight toxins. Based on the characteristics of host plant susceptibility or resistance to the toxin, Alternaria phytotoxins are classified into host-selective toxins (HSTs) and non-host-selective toxins (NHSTs). These Alternaria toxins exhibit a variety of biological activities such as phytotoxic, cytotoxic, and antimicrobial properties. Generally, HSTs are toxic to host plants and can cause severe economic losses. Some NHSTs such as alternariol, altenariol methyl-ether, and altertoxins also show high cytotoxic and mutagenic activities in the exposed human or other vertebrate species. Thus, Alternaria toxins are meaningful for drug and pesticide development. For example, AAL-toxin, maculosin, tentoxin, and tenuazonic acid have potential to be developed as bioherbicides due to their excellent herbicidal activity. Like altersolanol A, bostrycin, and brefeldin A, they exhibit anticancer activity, and ATX V shows high activity to inhibit the HIV-1 virus. This review focuses on the classification, chemical structure, occurrence, bioactivity, and biosynthesis of the major Alternaria phytotoxins, including 30 HSTs and 50 NHSTs discovered to date.
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Affiliation(s)
- He Wang
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
| | - Yanjing Guo
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
| | - Zhi Luo
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
| | - Liwen Gao
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
| | - Rui Li
- Agricultural and Animal Husbandry Ecology and Resource Protection Center, Ordos Agriculture and Animal Husbandry Bureau, Ordos 017010, China;
| | - Yaxin Zhang
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
| | - Hazem M. Kalaji
- Department of Plant Physiology, Institute of Biology, Warsaw University of Life Sciences SGGW, 159 Nowoursynowska 159, 02-776 Warsaw, Poland;
- Institute of Technology and Life Sciences—National Research Institute, Falenty, Al. Hrabska 3, 05-090 Raszyn, Poland
| | - Sheng Qiang
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
| | - Shiguo Chen
- Weed Research Laboratory, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China; (H.W.); (Y.G.); (Z.L.); (L.G.); (Y.Z.); (S.Q.)
- Correspondence: ; Tel.: +86-25-84395117
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14
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Yang S, Chen C, Chen J, Li C. Total Synthesis of the Potent and Broad-Spectrum Antibiotics Amycolamicin and Kibdelomycin. J Am Chem Soc 2021; 143:21258-21263. [PMID: 34879199 DOI: 10.1021/jacs.1c11477] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The complex and intriguing structures of the antibiotics amycolamicin and kibdelomycin are herein confirmed through total synthesis. Careful titration of the synthetic products reveals that kibdelomycin is the salt form of amycolamicin. This synthesis employs a highly convergent strategy, which provides a modular approach for further SAR studies of this class of antibiotics.
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Affiliation(s)
- Shaoqiang Yang
- National Institute of Biological Sciences, Beijing, 102206, China
| | - Chenglong Chen
- National Institute of Biological Sciences, Beijing, 102206, China
| | - Jie Chen
- National Institute of Biological Sciences, Beijing, 102206, China.,Tsinghua Institute of Multidisciplinary Biomedical Research, Tsinghua University, Beijing, 100084, China
| | - Chao Li
- National Institute of Biological Sciences, Beijing, 102206, China.,Tsinghua Institute of Multidisciplinary Biomedical Research, Tsinghua University, Beijing, 100084, China
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15
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Zhang R, Genov M, Pretsch A, Pretsch D, Moloney MG. Mediation of metal chelation in cysteine-derived tetramate systems. Chem Sci 2021; 12:16106-16122. [PMID: 35024133 PMCID: PMC8672780 DOI: 10.1039/d1sc05542a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Accepted: 11/22/2021] [Indexed: 12/11/2022] Open
Abstract
A study of bicyclic tetramates modified with a bulky ester, which leads to steric hindrance of distal chelating atoms as a route for the alteration of metal binding ability is reported. This approach required the development of a direct method for the synthesis of different esters of cysteine from cystine, which then provided access to bicyclic tetramates by Dieckmann cyclisation. Further derivation to ketones and carboxamides by Grignard addition and transamination reactions respectively provided rapid access to a chemical library of tetramates with diverse substitution. Of interest is that bicyclic tetramate ketones and carboxamides showed different tautomeric and metal binding behaviour in solution. Significantly, in both systems, the incorporation of bulky C-5 esters at the bridging position not only reduced metal binding, but also enhanced antibacterial potencies against Gram-positive MRSA bacteria. Those tetramates with antibacterial activity which was not metal dependent showed physiochemical properties of MSA of 559-737 Å2, MW of 427-577 Da, clogP of 1.8-6.1, clogD7.4 of -1.7 to 3.7, PSA of 83-109 Å2 and relative PSA of 12-15% and were generally Lipinski rule compliant. A subset of tetramates exhibited good selectivity towards prokaryotic bacterial cells. Given that the work reported herein is synthesis-led, without the underpinning detailed mechanistic understanding of biological/biochemical mechanism, that the most active compounds occupy a small region of chemical space as defined by MW, clogP, PSA and %PSA is of interest. Overall, the bicyclic tetramate template is a promising structural motif for the development of novel antibacterial drugs, with good anti-MRSA potencies and appropriate drug-like physiochemical properties, coupled with a potential for multi-targeting mechanisms and low eukaryotic cytotoxicity.
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Affiliation(s)
- Ruirui Zhang
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
| | - Miroslav Genov
- Oxford Antibiotic Group The Oxford Science Park, Magdalen Centre Oxford OX4 4GA UK
| | - Alexander Pretsch
- Oxford Antibiotic Group The Oxford Science Park, Magdalen Centre Oxford OX4 4GA UK
| | - Dagmar Pretsch
- Oxford Antibiotic Group The Oxford Science Park, Magdalen Centre Oxford OX4 4GA UK
| | - Mark G Moloney
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK .,Oxford Suzhou Centre for Advanced Research Building A, 388 Ruo Shui Road, Suzhou Industrial Park Jiangsu 215123 P. R. China
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16
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Wang H, Yao Q, Guo Y, Zhang Q, Wang Z, Strasser RJ, Valverde BE, Chen S, Qiang S, Kalaji HM. Structure-based ligand design and discovery of novel tenuazonic acid derivatives with high herbicidal activity. J Adv Res 2021; 40:29-44. [PMID: 36100332 PMCID: PMC9481958 DOI: 10.1016/j.jare.2021.12.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 12/02/2021] [Accepted: 12/08/2021] [Indexed: 11/24/2022] Open
Abstract
The model of lead molecule TeA binding to the QB site in Arabidopsis D1 protein was constructed. A series of new derivatives were designed and docked to the QB site of by molecular simulations. Derivatives D6, D13 and D27 with better affinities than TeA were screened out and synthesized. D6 and D13 are promising compounds to develop new PSII herbicides with superior performance. Model-based ligand design is a valuable tool to find new PSII inhibitors based on lead molecule TeA.
Introduction Objectives Methods Results Conclusion
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17
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Unten Y, Murai M, Sakai K, Asami Y, Yamamoto T, Masuya T, Miyoshi H. Natural tetramic acids elicit multiple inhibitory actions against mitochondrial machineries presiding over oxidative phosphorylation. Biosci Biotechnol Biochem 2021; 85:2368-2377. [PMID: 34625801 DOI: 10.1093/bbb/zbab176] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Accepted: 10/04/2021] [Indexed: 11/14/2022]
Abstract
The mitochondrial machineries presiding over ATP synthesis via oxidative phosphorylation are promising druggable targets. Fusaramin, a 3-acyl tetramic acid isolated from Fusarium concentricum FKI-7550, is an inhibitor of oxidative phosphorylation in Saccharomyces cerevisiae mitochondria, although its target has yet to be identified. Fusaramin significantly interfered with [3H]ADP uptake by yeast mitochondria at the concentration range inhibiting oxidative phosphorylation. A photoreactive fusaramin derivative (pFS-5) specifically labeled voltage-dependent anion channel 1 (VDAC1), which facilitates trafficking of ADP/ATP across the outer mitochondrial membrane. These results strongly suggest that the inhibition of oxidative phosphorylation by fusaramin is predominantly attributable to the impairment of VDAC1 functions. Fusaramin also inhibited FoF1-ATP synthase and ubiquinol-cytochrome c oxidoreductase (complex III) at concentrations higher than those required for the VDAC inhibition. Considering that other tetramic acid derivatives are reported to inhibit FoF1-ATP synthase and complex III, natural tetramic acids were found to elicit multiple inhibitory actions against mitochondrial machineries.
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Affiliation(s)
- Yufu Unten
- Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
| | - Masatoshi Murai
- Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
| | | | - Yukihiro Asami
- Graduate School of Infection Control Sciences.,Ōmura Satoshi Memorial Institute, Kitasato University, Tokyo, Japan
| | - Takenori Yamamoto
- Division of Molecular Target and Gene Therapy Production, National Institute of Health Sciences, Kanagawa, Japan
| | - Takahiro Masuya
- Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
| | - Hideto Miyoshi
- Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
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18
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Mohamed GA, Ibrahim SRM. Untapped Potential of Marine-Associated Cladosporium Species: An Overview on Secondary Metabolites, Biotechnological Relevance, and Biological Activities. Mar Drugs 2021; 19:645. [PMID: 34822516 PMCID: PMC8622643 DOI: 10.3390/md19110645] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 11/11/2021] [Accepted: 11/16/2021] [Indexed: 12/12/2022] Open
Abstract
The marine environment is an underexplored treasure that hosts huge biodiversity of microorganisms. Marine-derived fungi are a rich source of novel metabolites with unique structural features, bioactivities, and biotechnological applications. Marine-associated Cladosporium species have attracted considerable interest because of their ability to produce a wide array of metabolites, including alkaloids, macrolides, diketopiperazines, pyrones, tetralones, sterols, phenolics, terpenes, lactones, and tetramic acid derivatives that possess versatile bioactivities. Moreover, they produce diverse enzymes with biotechnological and industrial relevance. This review gives an overview on the Cladosporium species derived from marine habitats, including their metabolites and bioactivities, as well as the industrial and biotechnological potential of these species. In the current review, 286 compounds have been listed based on the reported data from 1998 until July 2021. Moreover, more than 175 references have been cited.
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Affiliation(s)
- Gamal A. Mohamed
- Department of Natural Products and Alternative Medicine, Faculty of Pharmacy, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Sabrin R. M. Ibrahim
- Preparatory Year Program, Batterjee Medical College, Jeddah 21442, Saudi Arabia;
- Department of Pharmacognosy, Faculty of Pharmacy, Assiut University, Assiut 71526, Egypt
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19
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Soliga KJ, Bär SI, Oberhuber N, Zeng H, Schrey H, Schobert R. Synthesis and Bioactivity of Ancorinoside B, a Marine Diglycosyl Tetramic Acid. Mar Drugs 2021; 19:583. [PMID: 34677482 PMCID: PMC8541288 DOI: 10.3390/md19100583] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Revised: 10/14/2021] [Accepted: 10/15/2021] [Indexed: 11/17/2022] Open
Abstract
The sponge metabolite ancorinoside B was prepared for the first time in 16 steps and 4% yield. It features a β-d-galactopyranosyl-(1→4)-β-d-glucuronic acid tethered to a d-aspartic acid-derived tetramic acid. Key steps were the synthesis of a fully protected d-lactose derived thioglycoside, its attachment to a C20-aldehyde spacer, functionalization of the latter with a terminal N-(β-ketoacyl)-d-aspartate, and a basic Dieckmann cyclization to close the pyrrolidin-2,4-dione ring with concomitant global deprotection. Ancorinoside B exhibited multiple biological effects of medicinal interest. It inhibited the secretion of the cancer metastasis-relevant matrix metalloproteinases MMP-2 and MMP-9, and also the growth of Staphylococcus aureus biofilms by ca 87% when applied at concentrations as low as 0.5 µg/mL. This concentration is far below its MIC of ca 67 µg/mL and thus unlikely to induce bacterial resistance. It also led to a 67% dispersion of preformed S. aureus biofilms when applied at a concentration of ca 2 µg/mL. Ancorinoside B might thus be an interesting candidate for the control of the general hospital, catheter, or joint protheses infections.
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Affiliation(s)
- Kevin J. Soliga
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, D-95440 Bayreuth, Germany; (K.J.S.); (S.I.B.); (N.O.)
| | - Sofia I. Bär
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, D-95440 Bayreuth, Germany; (K.J.S.); (S.I.B.); (N.O.)
| | - Natalie Oberhuber
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, D-95440 Bayreuth, Germany; (K.J.S.); (S.I.B.); (N.O.)
| | - Haoxuan Zeng
- Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (H.Z.); (H.S.)
| | - Hedda Schrey
- Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (H.Z.); (H.S.)
| | - Rainer Schobert
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, D-95440 Bayreuth, Germany; (K.J.S.); (S.I.B.); (N.O.)
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20
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Matiadis D, Stefanou V, Tsironis D, Panagiotopoulou A, Igglessi-Markopoulou O, Markopoulos J. Synthesis and preliminary biological evaluation of antibacterial and antifungal 5-arylidene tetramic acid-cadmium(II) complexes. Arch Pharm (Weinheim) 2021; 354:e2100305. [PMID: 34570387 DOI: 10.1002/ardp.202100305] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Revised: 09/04/2021] [Accepted: 09/08/2021] [Indexed: 11/09/2022]
Abstract
The synthesis and biological evaluation of 5-arylidene-N-acetyl-tetramic acids cadmium(II) complexes are reported. Eleven novel compounds were prepared, characterized by nuclear magnetic resonance experiments and screened for their antimicrobial activity against five bacterial species (Escherichia coli, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and methicillin-resistant Staphylococcus aureus [MRSA]) and two fungi (Candida albicans and Cryptococcus neoformans). The complexes showed similar or enhanced activities against MRSA in comparison to the corresponding ligands and, additionally, promising antifungal activities against C. neoformans. The most active compounds 3c and 3h showed remarkable activities against MRSA (minimum inhibitory activity [MIC] values of 32 and 4 μg/ml, respectively) and C. neoformans (MIC values of 8 and 16 μg/ml, respectively), accompanied by no human cell toxicity and hemolytic activity within the tested concentration range. The results demonstrate that appropriately functionalized tetramic acids attached with lipophilic alkanoyl chain and after complexation with cadmium(II) ions may act as valuable lead compounds for further investigations toward the development of novel antibacterial and/or antifungal agents.
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Affiliation(s)
- Dimitris Matiadis
- Laboratory of Organic Chemistry, School of Chemical Engineering, National Technical University of Athens, Zografou Campus, Athens, Greece
| | - Valentina Stefanou
- Laboratory of Organic Chemistry, School of Chemical Engineering, National Technical University of Athens, Zografou Campus, Athens, Greece
| | - Dimitrios Tsironis
- Laboratory of Organic Chemistry, School of Chemical Engineering, National Technical University of Athens, Zografou Campus, Athens, Greece
| | - Angeliki Panagiotopoulou
- Institute of Biosciences and Applications, National Center for Scientific Research "Demokritos", Ag. Paraskevi, Attiki, Greece
| | - Olga Igglessi-Markopoulou
- Laboratory of Organic Chemistry, School of Chemical Engineering, National Technical University of Athens, Zografou Campus, Athens, Greece
| | - John Markopoulos
- Department of Chemistry, Laboratory of Inorganic Chemistry, University of Athens, Panepistimiopolis, Athens, Greece
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21
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Zhang R, Genov M, Pretsch A, Pretsch D, Moloney MG. Metal Binding and Its Amelioration in Tetramates. J Org Chem 2021; 86:12886-12907. [PMID: 34465089 DOI: 10.1021/acs.joc.1c01541] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Metal chelation in tetramates may be ameliorated by changing the ligating group and by steric blocking, which in turn leads to a change in their antibacterial properties; the former was achieved by replacement of an amide with a C-9 C═N bond and the latter by the synthesis of cysteine-derived tetramates with functionalization at the C-6 or C-9 enolic groups. In both cases, the metal-chelating ability was weak, and a loss of antibacterial activity was observed. Tetramate alkylations with an extended tricarbonyl-conjugated system could be achieved under Mitsunobu conditions which led to regioisomers, distinguishable by careful heteronuclear multiple bond coherence correlation and carbonyl carbon chemical shift analysis. C-9 and C-6 O-alkylation were observed but not C-8 O-alkylation for tetramate carboxamides; interestingly, C-7 alkylation with allyl and prenyl derivatives was also observed, and this arose by the rearrangement of initially formed O-alkyl products. Only the C-7 alkylated tetramate derivatives 13a and 13d with no metal-chelating ability demonstrated promising antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA), with the most active analogue exhibiting a minimum inhibitory concentration of ≤ 1.95 μg/mL against MRSA, suggesting a mechanism of action independent of metal chelation. Otherwise, modifications at C-6/C-9 of tetramates led to a complete loss of metal-chelating ability, which correlated with the loss of antibacterial activity. This work further confirms that the metal-chelating capability is of fundamental importance in the biological activity of tetramates.
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Affiliation(s)
- Ruirui Zhang
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K
| | - Miroslav Genov
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Alexander Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Dagmar Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Mark G Moloney
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K.,Oxford Suzhou Centre for Advanced Research, Building A, 388 Ruo Shui Road, Suzhou Industrial Park, Jiangsu 215123, P.R. China
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22
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Treiber L, Pezolt C, Zeng H, Schrey H, Jungwirth S, Shekhar A, Stadler M, Bilitewski U, Erb-Brinkmann M, Schobert R. Dual Agents: Fungal Macrocidins and Synthetic Analogues with Herbicidal and Antibiofilm Activities. Antibiotics (Basel) 2021; 10:antibiotics10081022. [PMID: 34439072 PMCID: PMC8388955 DOI: 10.3390/antibiotics10081022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Revised: 08/16/2021] [Accepted: 08/19/2021] [Indexed: 12/16/2022] Open
Abstract
Eight analogues of the bioherbicides macrocidin A (1) and Z (2) with structural variance in the size of the macrocycle, its para- or meta-cyclophane character, and its functional groups were synthesized on two modular routes and tested for herbicidal, antibiotic, and antibiofilm activities. Apart from the lead compounds 1 and 2, the structurally simplified dihydromacrocidin Z (3) and normacrocidin Z (4) showed high herbicidal activity in either thistles, dandelions or in both. The derivatives 2, 3, and dibromide 9 also inhibited the growth of Staphylococcus aureus biofilms by ca 70% when applied at subtoxic concentrations as low as ca 20 µM, which are unlikely to induce bacterial resistance. They also led to the dispersion of preformed biofilms of S. aureus, exceeding a similar effect by microporenic acid A, a known biofilm inhibitor. Compounds 3 and 9 showed no noticeable cytotoxicity against human cancer and endothelial cells at concentrations below 50 µM, making them conceivable candidates for application as anti-biofilm agents in a medicinal context.
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Affiliation(s)
- Laura Treiber
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, 95440 Bayreuth, Germany; (L.T.); (C.P.)
| | - Christine Pezolt
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, 95440 Bayreuth, Germany; (L.T.); (C.P.)
| | - Haoxuan Zeng
- Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (H.Z.); (H.S.); (M.S.)
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Braunschweig, Germany
| | - Hedda Schrey
- Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (H.Z.); (H.S.); (M.S.)
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Braunschweig, Germany
| | - Stefan Jungwirth
- Compound Profiling and Screening, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (S.J.); (A.S.); (U.B.)
| | - Aditya Shekhar
- Compound Profiling and Screening, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (S.J.); (A.S.); (U.B.)
| | - Marc Stadler
- Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (H.Z.); (H.S.); (M.S.)
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Braunschweig, Germany
| | - Ursula Bilitewski
- Compound Profiling and Screening, Helmholtz Centre for Infection Research GmbH, Inhoffenstrasse 7, 38124 Braunschweig, Germany; (S.J.); (A.S.); (U.B.)
| | | | - Rainer Schobert
- Department of Chemistry, University Bayreuth, Universitaetsstr. 30, 95440 Bayreuth, Germany; (L.T.); (C.P.)
- Correspondence: ; Fax: +49-(0)921-552672
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23
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Mo X, Gulder TAM. Biosynthetic strategies for tetramic acid formation. Nat Prod Rep 2021; 38:1555-1566. [PMID: 33710214 DOI: 10.1039/d0np00099j] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Covering: up to the end of 2020Natural products bearing tetramic acid units as part of complex molecular architectures exhibit a broad range of potent biological activities. These compounds thus attract significant interest from both the biosynthetic and synthetic communities. Biosynthetically, most of the tetramic acids are derived from hybrid polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) machineries. To date, over 30 biosynthetic gene clusters (BGCs) involved in tetramate formation have been identified, from which different biosynthetic strategies evolved in Nature to assemble this intriguing structural unit were characterized. In this Highlight we focus on the biosynthetic concepts of tetramic acid formation and discuss the molecular mechanism towards selected representatives in detail, providing a systematic overview for the development of strategies for targeted tetramate genome mining and future applications of tetramate-forming biocatalysts for chemo-enzymatic synthesis.
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Affiliation(s)
- Xuhua Mo
- Shandong Key Laboratory of Applied Mycology, School of Life Sciences, Qingdao Agricultural University, 266109 Qingdao, China. and Chair of Technical Biochemistry, Technische Universität Dresden, Bergstraße 66, 01069 Dresden, Germany.
| | - Tobias A M Gulder
- Chair of Technical Biochemistry, Technische Universität Dresden, Bergstraße 66, 01069 Dresden, Germany.
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24
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Chen M, Geng CW, Han L, Liu Y, Yu YK, Lu AM, Yang CL, Li GH. Design, synthesis, crystal structure, and herbicidal activity of novel pyrrolidine-2,4-dione derivatives incorporating an alkyl ether pharmacophore with natural tetramic acids as lead compounds. NEW J CHEM 2021. [DOI: 10.1039/d1nj00119a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of pyrrolidine-2,4-dione derivatives incorporating a chainlike alkoxyalkyl moiety or substituted phenoxyethyl moiety were designed and synthesized based on natural tetramic acids. Some target compounds showed obvious herbicidal activities.
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Affiliation(s)
- Min Chen
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
- Department of Chemistry
| | - Chun-Wen Geng
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
| | - Ling Han
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
| | - Yu Liu
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
| | - Yong-Kai Yu
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
| | - Ai-Min Lu
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
- Department of Chemistry
| | - Chun-Long Yang
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
- Department of Chemistry
| | - Guo-Hua Li
- Jiangsu Key Laboratory of Pesticide Science
- Nanjing Agricultural University
- Nanjing
- P. R. China
- Department of Chemistry
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25
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Han C, Nie L, Han X, Zhang Y, Sun K, Shi L, Cui G, Meng W. One-Pot Three-Component Synthesis of Novel 1,5-Benzodiazepine Derivatives and Their anti-BVDV (Bovine Viral Diarrhea Virus) Activity. CHINESE J ORG CHEM 2021. [DOI: 10.6023/202004018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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26
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Hussain H, Ali I, Elizbit, Hussain W, Mamadalieva NZ, Hussain A, Ali M, Ahmed I, Ullah I, Green IR. Synthetic Studies towards Fungal glycosides: An Overview. CURR ORG CHEM 2020. [DOI: 10.2174/1385272824999201105160034] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Fungi have provided intriguing chemical diversity and have additionally proven to
be a tremendous source for a great variety of therapeutic molecules. Various fungal glycosides
have been reported from fungi and the majority of these metabolites possess cytotoxic and
antimicrobial effects. Although natural products are obtained in most cases in small amounts
from the specific natural source, total syntheses of these valuable commodities remain one of
the most important ways of obtaining them on a large scale for more detailed and comprehensive
biological studies. In addition, the total synthesis of secondary metabolites is a useful
tool, not only for the disclosure of novel complex pharmacologically active molecules but also
for the establishment of cutting-edge methodologies in synthetic chemistry. Numerous fungal
glycosides have been synthesized in the last four decades regarding the following natural
product classes viz., tetramic acid glycosides (epicoccamides A and D), polyketide glycosides (TMC-151C), 2-pyrone
glycosides (epipyrone A), diterpene glycosides (sordarin), depside glycosides (CRM646-A and –B, KS-501 and KS-
502), caloporosides (caloporoside A), glycolipids (emmyguyacins A and B, acremomannolipin A), and cerebrosides
(cerebroside B, Asperamide B, phalluside-1, Sch II). The current literature review about fungal glycoside synthetic
studies is, therefore, of interest for a wide range of scientists and researchers in the field of organic, natural product,
and medicinal chemists as it outlines key strategies of fungal glycosides and, in particular, glycosylation, the known
biological and pharmacological effects of these natural compounds have afforded a new dimension of exposure.
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Affiliation(s)
- Hidayat Hussain
- Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Weinberg 3, D-06120 Halle (Saale), Germany
| | - Iftikhar Ali
- Shandong Key Laboratory of TCM Quality Control Technology, Shandong Analysis and Test Center, Jinan, Shandong Province (250014), China
| | - Elizbit
- Department Materials Engineering, National University of Sciences and Technology (NUST) H12, Islamabad, Pakistan
| | - Wahid Hussain
- Department of Botany, Government Post Graduate College Parachinar, District Kurram, Pakistan
| | - Nilufar Z. Mamadalieva
- Institute of the Chemistry of Plant Substances of the Academy Sciences of Uzbekistan, Tashkent 100170, Uzbekistan
| | - Amjad Hussain
- Department of Chemistry University of Okara, Okara, Pakistan
| | - Maroof Ali
- College of life Sciences, Anhui Normal University, Wuhu 241000, China
| | - Ishtiaq Ahmed
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge, England, United Kingdom
| | - Izhar Ullah
- Department of Biotechnology, University of Kotli, Azad Jammu and Kashmir, Pakistan
| | - Ivan R. Green
- Department of Chemistry and Polymer Science, University of Stellenbosch, Private Bag X1, Matieland, Stellenbosch 7600, South Africa
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27
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Wang XY, Ye XS, Gao S, Liu JX, Tian WJ, Wang GH, Chen HF, Lin T. Cytotoxic compound triacremoniate from Marine Fungus Acremonium citrinum. MMF4. Fitoterapia 2020; 147:104766. [PMID: 33130231 DOI: 10.1016/j.fitote.2020.104766] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 10/19/2020] [Accepted: 10/21/2020] [Indexed: 01/12/2023]
Abstract
Two new compounds, triacremoniate (1) and dietziamide C (2) along with known compounds β-Adenosine (3) and acrepyrone A (4) were obtained from the mangrove-derived fungus Acremonium citrinum. MMF4. Their structures were unambiguously determined by extensive spectroscopic methods, including UV, IR, HRESIMS and NMR. Triacremoniate (1) can promote apoptosis of HeLa cells by increasing the PARP cleavage and the phosphorylation of JNK and p38.
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Affiliation(s)
- Xiao-Yao Wang
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China
| | - Xian-Sheng Ye
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China
| | - Shuo Gao
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China
| | - Jin-Xi Liu
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China
| | - Wen-Jing Tian
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China
| | - Guang-Hui Wang
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China
| | - Hai-Feng Chen
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China.
| | - Ting Lin
- Fujian Provincial Key Laboratory of Innovative Drug Target, School of Pharmaceutical Sciences, Xiamen University, Xiamen 361005, People's Republic of China.
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28
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Cogan DP, Ly J, Nair SK. Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation. ACS Chem Biol 2020; 15:2783-2791. [PMID: 33017142 DOI: 10.1021/acschembio.0c00579] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
While several bioactive natural products that contain tetramate or pyridone heterocycles have been described, information on the enzymology underpinning these functionalities has been limited. Here we biochemically characterize an off-loading Dieckmann cyclase, NcmC, that installs the tetramate headgroup in nocamycin, a hybrid polyketide/nonribosomal peptide natural product. Crystal structures of the enzyme (1.6 Å) and its covalent complex with the epoxide cerulenin (1.6 Å) guide additional structure-based mutagenesis and product-profile analyses. Our results offer mechanistic insights into how the conserved thioesterase-like scaffold has been adapted to perform a new chemical reaction, namely, heterocyclization. Additional bioinformatics combined with docking and modeling identifies likely candidates for heterocycle formation in underexplored gene clusters and uncovers a modular basis of substrate recognition by the two subdomains of these Dieckmann cyclases.
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29
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Zhang R, Li X, Genov M, Pretsch A, Pretsch D, Moloney MG. Synthetic Access to Hydrophilic Tetramate Derivatives of Cysteine. J Org Chem 2020; 85:12393-12407. [PMID: 32880449 DOI: 10.1021/acs.joc.0c01636] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The synthesis, structural, and antibacterial evaluation of bicyclic tetramate derivatives of cysteine rendered hydrophilic with pendant heterocyclic substituents is reported; effective synthetic protocols and antibacterial activity for a small library of polar derivatives were found, and direct evidence for strong metal chelation in these systems was obtained. A computational study has developed a detailed understanding of the controlling factors of the key Dieckmann cyclization step.
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Affiliation(s)
- Ruirui Zhang
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K
| | - Xiang Li
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K.,Department of Pharmaceutical Engineering, China Pharmaceutical University, Nanjing 211198, P. R. China
| | - Miroslav Genov
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Alexander Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Dagmar Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre, Oxford OX4 4GA, U.K
| | - Mark G Moloney
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K.,Oxford Suzhou Centre for Advanced Research, Building A, 388 Ruo Shui Road, Suzhou Industrial Park, Jiangsu 215123, P. R. China
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30
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Heravi MM, Momeni T, Zadsirjan V, Mohammadi L. Application of The Dess-Martin Oxidation in Total Synthesis of Natural Products. Curr Org Synth 2020; 18:125-196. [PMID: 32940184 DOI: 10.2174/1570179417666200917102634] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Revised: 08/07/2020] [Accepted: 08/18/2020] [Indexed: 11/22/2022]
Abstract
Dess-Martin periodinane (DMP), a commercially available chemical, is frequently utilized as a mild oxidative agent for the selective oxidation of primary and secondary alcohols to their corresponding aldehydes and ketones, respectively. DMP shows several merits over other common oxidative agents such as chromiumand DMSO-based oxidants; thus, it is habitually employed in the total synthesis of natural products. In this review, we try to underscore the applications of DMP as an effective oxidant in an appropriate step (steps) in the multi-step total synthesis of natural products.
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Affiliation(s)
- Majid M Heravi
- Department of Chemistry, School of Science, Alzahra University, POBox 1993891176, Vanak, Tehran, Iran
| | - Tayebe Momeni
- Department of Chemistry, School of Science, Alzahra University, POBox 1993891176, Vanak, Tehran, Iran
| | - Vahideh Zadsirjan
- Department of Chemistry, School of Science, Alzahra University, POBox 1993891176, Vanak, Tehran, Iran
| | - Leila Mohammadi
- Department of Chemistry, School of Science, Alzahra University, POBox 1993891176, Vanak, Tehran, Iran
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31
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Abstract
A convergent synthetic route to the fungal metabolites cladosins B and C has been developed, affording these natural products in 29% and 27% overall yield, respectively. The cladosins are rare examples of hybrid polyketides featuring a 3-enamine tetramic acid group derived from l-valine. Key steps in this modular six-step sequence include a DMAP-mediated O- to C-acyl rearrangement to unite the side chains with the tetramic acid core and subsequent amine incorporation using either ammonium acetate or HMDS.
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Affiliation(s)
- Keith P Reber
- Department of Chemistry, Towson University, Towson, Maryland 21252, United States
| | - James Mease
- Department of Chemistry, Towson University, Towson, Maryland 21252, United States
| | - Justin Kim
- Department of Chemistry, Towson University, Towson, Maryland 21252, United States
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32
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Chen M, Zhang L, Lu A, Wang X, Si W, Yan J, Yang C. Novel carboxylated pyrroline-2-one derivatives bearing a phenylhydrazine moiety: Design, synthesis, antifungal evaluation and 3D-QSAR analysis. Bioorg Med Chem Lett 2020; 30:127519. [PMID: 32860979 DOI: 10.1016/j.bmcl.2020.127519] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Revised: 08/20/2020] [Accepted: 08/21/2020] [Indexed: 12/22/2022]
Abstract
Aiming to discover novel high-efficient antifungal leads that possess an innovative action mechanism, twenty-three carboxylated pyrroline-2-one derivatives, bearing a phenylhydrazine moiety, were rationally designed and firstly prepared in this letter. The in vitro bioassays showed that most of the compounds possessed excellent antifungal effects with the EC50 values of less than 1 μg/mL against the phytopathogenic fungi Fusarium graminearum (Fg), Botrytis cinerea (Bc), Rhizoctonia solani (Rs) and Colletotrichum capsici (Cc). The further bioassays showed that the compound 6u showed the comparable in vivo control effect with carbendazim against fusarium head blight and rice sheath blight. The 3D-QSAR model revealed the pivotal effects of a bulky electron-donating group at the 1-position of pyrrole ring, a bulky electron-withdrawing group at the 4-position of phenyl ring and a small alkyl at the carbonate group on the anti-Rs activities of target compounds. The abnormal mycelial morphology and delayed spore germination were observed in the treatments of compound 6u. Given the excellent and broad-spectrum antifungal effects the target compounds have, we unfeignedly anticipated that the above finding could motivate the discovery of high-efficient antifungal leads, which might possess an innovative action mechanism against phytopathogenic fungi.
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Affiliation(s)
- Min Chen
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China
| | - Lizhi Zhang
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China; Institute of Synthesis, CHIA TAI Tianqing Pharmaceutical Group Co., Ltd, Nanjing, China
| | - Aimin Lu
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China
| | - Xiaobin Wang
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China
| | - Weijie Si
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China
| | - Jinghua Yan
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China
| | - Chunlong Yang
- Jiangsu Key Laboratory of Pesticide Science, College of Sciences, Nanjing Agricultural University, Nanjing, China.
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33
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Wingen LM, Rausch M, Schneider T, Menche D. Synthesis of Tetramic Acid Fragments Derived from Vancoresmycin Showing Inhibitory Effects towards S. aureus. ChemMedChem 2020; 15:1390-1393. [PMID: 32497343 PMCID: PMC7496136 DOI: 10.1002/cmdc.202000241] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Indexed: 11/28/2022]
Abstract
An efficient route to various vancoresmycin‐type tetramic acids has been developed. The modular route is based on an effective Fries‐type rearrangement to introduce various appending acetyl residues. The minimum inhibitory concentration (MIC) values of the new tetramic acids against Staphylococcus aureus and Escherichia coli were determined, revealing that three of the new compounds exhibit antimicrobial activity against S. aureus. These bioactive compounds were structurally most closely related to the authentic vancoresmycin building block. Additionally, the compounds induced a lial‐lux bioreporter, which responds to cell wall stress induced by antibiotics that interfere with the lipid II biosynthesis cycle. These data suggest the tetramic acid moiety to be a part of the vancoresmycin pharmacophore.
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Affiliation(s)
- Lukas Martin Wingen
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany
| | - Marvin Rausch
- Institut für Pharmazeutische Mikrobiologie, Rheinische Friedrich-Wilhelms-Universität Bonn, Meckenheimer Allee 168, 53115, Bonn, Germany.,German Center for Infection Research (DZIF), Partner site, Bonn-Cologne, Bonn, Germany
| | - Tanja Schneider
- Institut für Pharmazeutische Mikrobiologie, Rheinische Friedrich-Wilhelms-Universität Bonn, Meckenheimer Allee 168, 53115, Bonn, Germany
| | - Dirk Menche
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany
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34
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Li Y, Huang Z, Xu J, Ding Y, Tang DY, Lei J, Li HY, Chen ZZ, Xu ZG. Microwave-assisted efficient and facile synthesis of tetramic acid derivatives via a one-pot post-Ugi cascade reaction. Beilstein J Org Chem 2020; 16:663-669. [PMID: 32318123 PMCID: PMC7155898 DOI: 10.3762/bjoc.16.63] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2020] [Accepted: 03/09/2020] [Indexed: 11/23/2022] Open
Abstract
A facile microwave-assisted method for the synthesis of tetramic acid derivatives has been developed through an Ugi/Dieckmann cyclization strategy with DBU. This two-step one-pot procedure afforded the targeted tetramic acid analogues in good yields. With commercially available Ugi starting materials, microwave irradiation, a simple operation, excellent yields, and a broad scope, this reaction has the potential to produce a large number of tetramic acid analogues, which cannot be easily accessed by the classic synthetic methods.
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Affiliation(s)
- Yong Li
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China.,Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA
| | - Zheng Huang
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China
| | - Jia Xu
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China
| | - Yong Ding
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China
| | - Dian-Yong Tang
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China
| | - Jie Lei
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China.,Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA
| | - Hong-Yu Li
- Department of Pharmaceutical Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA
| | - Zhong-Zhu Chen
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China
| | - Zhi-Gang Xu
- College of Pharmacy, National & Local Joint Engineering Research Center of Targeted and Innovative Therapeutics, Chongqing Key Laboratory of Kinase Modulators as Innovative Medicine, Chongqing University of Arts and Sciences, Chongqing 402160, China
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35
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Mizota I, Maeda M, Imoto K, Shimizu M. Synthesis of Tetramic Acid Derivatives via a Tandem Umpolung Alkylation/Reduction/Cyclization Reaction of γ-Hydrazono β-Ketoester. Org Lett 2020; 22:3079-3083. [PMID: 32227901 DOI: 10.1021/acs.orglett.0c00824] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
An efficient method for the one-pot synthesis of tetramic acid derivatives was developed utilizing tandem umpolung N-alkylation/reduction/cyclization of γ-hydrazono β-ketoester. By using this reaction as a key step, the total synthesis of the 3-spiro 7-hydroxamic acid tetralin which possesses an HDAC inhibitory activity was also achieved.
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Affiliation(s)
- Isao Mizota
- Department of Chemistry for Materials, Graduate School of Engineering, Mie University, Tsu, Mie 514-8507, Japan
| | - Miki Maeda
- Department of Chemistry for Materials, Graduate School of Engineering, Mie University, Tsu, Mie 514-8507, Japan
| | - Kiho Imoto
- Department of Chemistry for Materials, Graduate School of Engineering, Mie University, Tsu, Mie 514-8507, Japan
| | - Makoto Shimizu
- Department of Chemistry for Materials, Graduate School of Engineering, Mie University, Tsu, Mie 514-8507, Japan.,School of Energy Science and Engineering College, Nanjing Tech University, Nanjing 211816, Jiangsu Province, China
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36
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del Corte X, López-Francés A, Maestro A, Martinez de Marigorta E, Palacios F, Vicario J. Brönsted Acid Catalyzed Multicomponent Synthesis of Phosphorus and Fluorine-Derived γ-Lactam Derivatives. J Org Chem 2020; 85:14369-14383. [DOI: 10.1021/acs.joc.0c00280] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Xabier del Corte
- Departamento de Química Orgánica I, Centro de Investigación y Estudios Avanzados “Lucio Lascaray”- Facultad de Farmacia, University of the Basque Country, UPV/EHU, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain
| | - Adrián López-Francés
- Departamento de Química Orgánica I, Centro de Investigación y Estudios Avanzados “Lucio Lascaray”- Facultad de Farmacia, University of the Basque Country, UPV/EHU, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain
| | - Aitor Maestro
- Departamento de Química Orgánica I, Centro de Investigación y Estudios Avanzados “Lucio Lascaray”- Facultad de Farmacia, University of the Basque Country, UPV/EHU, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain
| | - Edorta Martinez de Marigorta
- Departamento de Química Orgánica I, Centro de Investigación y Estudios Avanzados “Lucio Lascaray”- Facultad de Farmacia, University of the Basque Country, UPV/EHU, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain
| | - Francisco Palacios
- Departamento de Química Orgánica I, Centro de Investigación y Estudios Avanzados “Lucio Lascaray”- Facultad de Farmacia, University of the Basque Country, UPV/EHU, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain
| | - Javier Vicario
- Departamento de Química Orgánica I, Centro de Investigación y Estudios Avanzados “Lucio Lascaray”- Facultad de Farmacia, University of the Basque Country, UPV/EHU, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain
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37
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Jakubczyk D, Dussart F. Selected Fungal Natural Products with Antimicrobial Properties. Molecules 2020; 25:E911. [PMID: 32085562 PMCID: PMC7070998 DOI: 10.3390/molecules25040911] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 02/13/2020] [Accepted: 02/14/2020] [Indexed: 01/14/2023] Open
Abstract
Fungal natural products and their effects have been known to humankind for hundreds of years. For example, toxic ergot alkaloids produced by filamentous fungi growing on rye poisoned thousands of people and livestock throughout the Middle Ages. However, their later medicinal applications, followed by the discovery of the first class of antibiotics, penicillins and other drugs of fungal origin, such as peptidic natural products, terpenoids or polyketides, have altered the historically negative reputation of fungal "toxins". The development of new antimicrobial drugs is currently a major global challenge, mainly due to antimicrobial resistance phenomena. Therefore, the structures, biosynthesis and antimicrobial activity of selected fungal natural products are described here.
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Affiliation(s)
- Dorota Jakubczyk
- Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznań, Poland
| | - Francois Dussart
- Department of Agriculture, Horticulture and Engineering Science, Scotland’s Rural College (SRUC), Edinburgh EH9 3JG, UK;
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38
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The Biological and Chemical Diversity of Tetramic Acid Compounds from Marine-Derived Microorganisms. Mar Drugs 2020; 18:md18020114. [PMID: 32075282 PMCID: PMC7074263 DOI: 10.3390/md18020114] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2020] [Revised: 02/12/2020] [Accepted: 02/14/2020] [Indexed: 12/25/2022] Open
Abstract
Tetramic acid (pyrrolidine-2,4-dione) compounds, isolated from a variety of marine and terrestrial organisms, have attracted considerable attention for their diverse, challenging structural complexity and promising bioactivities. In the past decade, marine-derived microorganisms have become great repositories of novel tetramic acids. Here, we discuss the biological activities of 277 tetramic acids of eight classifications (simple 3-acyl tetramic acids, 3-oligoenoyltetramic acids, 3-decalinoyltetramic acid, 3-spirotetramic acids, macrocyclic tetramic acids, N-acylated tetramic acids, α-cyclopiazonic acid-type tetramic acids, and other tetramic acids) from marine-derived microbes, including fungi, actinobacteria, bacteria, and cyanobacteria, as reported in 195 research studies up to 2019.
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39
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Wang X, Zhao L, Liu C, Qi J, Zhao P, Liu Z, Li C, Hu Y, Yin X, Liu X, Liao Z, Zhang L, Xia X. New Tetramic Acids Comprising of Decalin and Pyridones From Chaetomium olivaceum SD-80A With Antimicrobial Activity. Front Microbiol 2020; 10:2958. [PMID: 32010075 PMCID: PMC6974552 DOI: 10.3389/fmicb.2019.02958] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Accepted: 12/09/2019] [Indexed: 12/22/2022] Open
Abstract
Cycloaddition reactions such as intramolecular Diels–Alder (IMDA) are extremely important in constructing multicyclic scaffolds with diverse bioactivities. Using MycB as a biomarker, three new polyketides – Chaetolivacines A (1), B (3), and C (4) – with one known compound Myceliothermophin E (2) comprising of decalin and 4-hydroxy-2-pyridones were obtained from the culture of Chaetomium olivaceum SD-80A under the guidance of gene mining. The structures of these compounds were established using detailed 1D, 2D NMR, and high-resolution electron spray ionization mass spectroscopy (HRESIMS) analysis. The relative and absolute configurations of the compounds 1, 3, and 4 were elucidated by NOESY and ECD. The biosynthesis pathways of these compounds were proposed, which involves in three key genes ChaA [polyketide synthase-non-ribosomal peptide synthetases (PKS-NRPS)], ChaB, and ChaC. Compounds 1–4 were tested for their antimicrobial activities, and compounds 2 and 3 showed moderate bioactivity against Staphylococcus aureus (SA) and methicillin-resistant S. aureus (MRSA) with MIC values of 15.8 and 27.1 μM. The results showed that configuration of C-21 in 3 and 4 is important for anti-SA and anti-MRSA activities. This study reveals the significant potential of the genus Chaetomium in producing new PKS-NRPS, therefore increasing the speed in the mining for new sources of antimicrobial agents.
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Affiliation(s)
- Xinzhu Wang
- Department of Pharmaceutical Engineering, School of Chemistry and Chemical Engineering, Southeast University, Nanjing, China
| | - Liya Zhao
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Chao Liu
- Institute of Agro-Food Science and Technology, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Jun Qi
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Peipei Zhao
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Zhaoming Liu
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
| | - Chunlei Li
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Yingying Hu
- Department of Pharmaceutical Engineering, School of Chemistry and Chemical Engineering, Southeast University, Nanjing, China
| | - Xin Yin
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Xin Liu
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Zhixin Liao
- Department of Pharmaceutical Engineering, School of Chemistry and Chemical Engineering, Southeast University, Nanjing, China
| | - Lixin Zhang
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China.,State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China
| | - Xuekui Xia
- Shandong Provincial Key Laboratory for Biosensor, Biology Institute, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
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Gotthardt M, Kanawati B, Schmidt F, Asam S, Hammerl R, Frank O, Hofmann T, Schmitt‐Kopplin P, Rychlik M. Comprehensive Analysis of the
Alternaria
Mycobolome Using Mass Spectrometry Based Metabolomics. Mol Nutr Food Res 2020; 64:e1900558. [DOI: 10.1002/mnfr.201900558] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2019] [Revised: 09/05/2019] [Indexed: 11/07/2022]
Affiliation(s)
- Marina Gotthardt
- Chair of Analytical Food ChemistryTechnical University of Munich Maximus‐von‐Imhof Forum 2 85354 Freising Germany
| | - Basem Kanawati
- HelmholtzZentrum München Ingolstädter Landstraβe 1 85764 Neuherberg Germany
| | - Frank Schmidt
- Chair of Analytical Food ChemistryTechnical University of Munich Maximus‐von‐Imhof Forum 2 85354 Freising Germany
| | - Stefan Asam
- Chair of Analytical Food ChemistryTechnical University of Munich Maximus‐von‐Imhof Forum 2 85354 Freising Germany
| | - Richard Hammerl
- Chair of Food Chemistry and Molecular SensoryTechnical University of Munich Lise‐Meitner‐Straβe 34 85354 Freising Germany
| | - Oliver Frank
- Chair of Food Chemistry and Molecular SensoryTechnical University of Munich Lise‐Meitner‐Straβe 34 85354 Freising Germany
| | - Thomas Hofmann
- Chair of Food Chemistry and Molecular SensoryTechnical University of Munich Lise‐Meitner‐Straβe 34 85354 Freising Germany
| | - Philippe Schmitt‐Kopplin
- Chair of Analytical Food ChemistryTechnical University of Munich Maximus‐von‐Imhof Forum 2 85354 Freising Germany
- HelmholtzZentrum München Ingolstädter Landstraβe 1 85764 Neuherberg Germany
| | - Michael Rychlik
- Chair of Analytical Food ChemistryTechnical University of Munich Maximus‐von‐Imhof Forum 2 85354 Freising Germany
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41
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RedH and PigC Catalyze the Biosynthesis of Hybrubins via Phosphorylation of 4'-Methoxy-2,2'-Bipyrrole-5'-Carbaldehyde. Appl Environ Microbiol 2020; 86:AEM.02331-19. [PMID: 31704680 DOI: 10.1128/aem.02331-19] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Accepted: 11/05/2019] [Indexed: 11/20/2022] Open
Abstract
Hybrubins are "unnatural" alkaloids with the same 4'-methoxy-2,2'-bipyrrole-5'-methine moiety found in prodiginines and a different ring derived from tetramic acids. Here, we demonstrated that RedH, a homologue of prodigiosin synthetase PigC, was responsible for the biosynthesis of hybrubins A and B in Streptomyces lividans In vitro reactions indicated that RedH and PigC catalyzed the intermolecular condensation between 4'-methoxy-2,2'-bipyrrole-5'-carbaldehyde (MBC) and (Z)-5-ethylidenetetramic acid (ETA) to produce hybrubin B. Moreover, we demonstrated that RedH and PigC activated MBC via phosphorylation of the aldehyde group to form an intermediate Pi-MBC and that the subsequent condensation between Pi-MBC and (Z)-5-ethylidenetetramic acid occurs in a nonenzymatic way.IMPORTANCE Hybrubins are an emerging class of prodiginines possessing a new C ring derived from 5'-substituted tetramic acids and the methylene bridge connecting the C ring at a different position. We have supposed that condensation between 4'-methoxy-2,2'-bipyrrole-5'-carbaldehyde (MBC) and 5-ethylidenetetramic acid (ETA) yields the hybrid natural products hybrubins, which was proposed to be catalyzed by the undecylprodigiosin synthetase RedH. However, it is doubted whether RedH is able to catalyze another type of condensation between MBC and tetramic acids. In this study, we have demonstrated that the MBC-ETA condensation proceeds through RedH/PigC-catalyzed enzymatic activation of MBC via phosphorylation and a nonenzymatic condensation of Pi-MBC with ETA. Since MBC analogues have been shown to be accepted by PigC, more hybrubin analogues might be produced by using combinations of MBC analogues and other tetramic acids in future studies.
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42
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Hamed SR, Abdel-Azeem AM, Dar PM. Recent Advancements on the Role of Biologically Active Secondary Metabolites from Chaetomium. Fungal Biol 2020. [DOI: 10.1007/978-3-030-31612-9_6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2022]
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43
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Montagnon T, Kalaitzakis D, Sofiadis M, Vassilikogiannakis G. The reticent tautomer: exploiting the interesting multisite and multitype reactivity of 4-pyrrolin-2-ones. Org Biomol Chem 2020; 18:180-190. [DOI: 10.1039/c9ob02471a] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Multisite and multitype reactivities of the highly versatile and valuable synthetic building block 4-pyrrolin-2-one are covered in this review.
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44
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Wang S, Bao L, Song D, Wang J, Cao X, Ke S. Amino acid-oriented poly-substituted heterocyclic tetramic acid derivatives as potential antifungal agents. Eur J Med Chem 2019; 179:567-575. [DOI: 10.1016/j.ejmech.2019.06.078] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2018] [Revised: 06/17/2019] [Accepted: 06/27/2019] [Indexed: 12/23/2022]
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45
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Heterocyclic lactam derivatives containing piperonyl moiety as potential antifungal agents. Bioorg Med Chem Lett 2019; 29:126661. [PMID: 31515187 DOI: 10.1016/j.bmcl.2019.126661] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2019] [Revised: 08/08/2019] [Accepted: 09/01/2019] [Indexed: 12/19/2022]
Abstract
To study the novel functionalized heterocyclic molecules with highly potential biological activity, two series of heterocyclic lactam derivatives containing the piperonyl moiety were designed and synthesized. The newly obtained compounds have been identified on the basis of analytical spectral data, including 1H NMR, 13C NMR, and ESI-MS. The target compounds were evaluated for their potential antifungal activities in vitro against twelve species of the plant pathogen fungi (Sclerotinia sclerotiorum, Rhizoctonia solani, Rap Sclerotinia stemrot, Fusarium graminearum, Phomopsis adianticola, Pestallozzia theae, Pestalotiopsis guepinii, Alternaria tenuis Nees, Monilinia fructicola, Colletotrichum gloeosporioides, Phytophthora capsici, Magnaporthe oryzae). Preliminary bioassays suggested that all prepared compounds I1-14 displayed broad-spectrum and moderate antifungal activities compared with the positive control hymexazol, especially for Sclerotinia sclerotiorum, Rap Sclerotinia stemrot, and Monilinia fructicola. In particular, the inhibition rate of compound I9 exhibited good inhibition activity reached 95.16% against Sclerotinia sclerotiorum, and compounds I5, I12 against Phytophthora capsici were 93.44%, 91.25%. Further studies revealed that compounds I5 (IC50 = 19.13 µM) and I12 (IC50 = 9.12 µM) exhibited obviously antifungal activities against Phytophthora capsici, which were better than that of commercial agricultural fungicide hymexazol (IC50 = 325.45 µM). Therefore, these target compounds could be further studied and explored as a lead skeleton for discovery of novel antifungal agents.
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46
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Bagum H, Christensen KE, Genov M, Pretsch A, Pretsch D, Moloney MG. Synthetic Access to 3-Substituted Pyroglutamic Acids from Tetramate Derivatives of Serine, Threonine, allo-Threonine, and Cysteine. J Org Chem 2019; 84:10257-10279. [PMID: 31287955 DOI: 10.1021/acs.joc.9b01432] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A general route which provides direct access to pyroglutamates from tetramates, making use of Suzuki coupling on an enol mesylate, followed by reduction, is reported. This work permits direct scaffold hopping from tetramate to substituted pyroglutamates. Some compounds in the library showed modest antibacterial activity against Gram-positive bacteria.
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Affiliation(s)
- Halima Bagum
- The Department of Chemistry, Chemistry Research Laboratory , University of Oxford , 12 Mansfield Road , Oxford OX1 3TA , U.K
| | - Kirsten E Christensen
- The Department of Chemistry, Chemistry Research Laboratory , University of Oxford , 12 Mansfield Road , Oxford OX1 3TA , U.K
| | - Miroslav Genov
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre , Oxford OX4 4GA , U.K
| | - Alexander Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre , Oxford OX4 4GA , U.K
| | - Dagmar Pretsch
- Oxford Antibiotic Group, The Oxford Science Park, Magdalen Centre , Oxford OX4 4GA , U.K
| | - Mark G Moloney
- The Department of Chemistry, Chemistry Research Laboratory , University of Oxford , 12 Mansfield Road , Oxford OX1 3TA , U.K.,Oxford Suzhou Centre for Advanced Research , Building A, 388 Ruo Shui Road, Suzhou Industrial Park , Suzhou , Jiangsu 215123 , P. R. China
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47
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Klapper M, Paschold A, Zhang S, Weigel C, Dahse HM, Götze S, Pace S, König S, Rao Z, Reimer L, Werz O, Stallforth P. Bioactivity and Mode of Action of Bacterial Tetramic Acids. ACS Chem Biol 2019; 14:1693-1697. [PMID: 31294961 DOI: 10.1021/acschembio.9b00388] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Microbially produced 3-acyltetramic acids display a diverse range of biological activities. The pyreudiones are new members of this class that were isolated from bacteria of the genus Pseudomonas. Here, we performed a structure-activity relationship study and determined their mode of action. An efficient biomimetic synthesis was developed to synthesize pyreudione A. Pyreudiones and synthetic analogs thereof were tested for their amoebicidal, antibacterial, antiproliferative, and cytotoxic activities. The length of the alkyl side chain and the nature of the amino acid residues within the tetramic acid moiety strongly affected activity, in particular against mycobacteria. The mode of action was shown to correlate with the ability of pyreudiones to act as protonophores. Removal of the acidic proton by methylation of pyreudione A resulted in a loss of bioactivity.
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Affiliation(s)
- Martin Klapper
- Independent Junior Research Group Chemistry of Microbial Communication, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - André Paschold
- Independent Junior Research Group Chemistry of Microbial Communication, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - Shuaibing Zhang
- Independent Junior Research Group Chemistry of Microbial Communication, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - Christiane Weigel
- Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - Hans-Martin Dahse
- Department of Infection Biology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - Sebastian Götze
- Independent Junior Research Group Chemistry of Microbial Communication, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - Simona Pace
- Department of Pharmaceutical/Medicinal Chemistry, Institute of Pharmacy, Friedrich-Schiller-University Jena, Philosophenweg 14, 07743, Jena, Germany
| | - Stefanie König
- Department of Pharmaceutical/Medicinal Chemistry, Institute of Pharmacy, Friedrich-Schiller-University Jena, Philosophenweg 14, 07743, Jena, Germany
| | - Zhigang Rao
- Department of Pharmaceutical/Medicinal Chemistry, Institute of Pharmacy, Friedrich-Schiller-University Jena, Philosophenweg 14, 07743, Jena, Germany
| | - Lisa Reimer
- Independent Junior Research Group Chemistry of Microbial Communication, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
| | - Oliver Werz
- Department of Pharmaceutical/Medicinal Chemistry, Institute of Pharmacy, Friedrich-Schiller-University Jena, Philosophenweg 14, 07743, Jena, Germany
| | - Pierre Stallforth
- Independent Junior Research Group Chemistry of Microbial Communication, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI), Beutenbergstrasse 11a, 07745 Jena, Germany
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Muszak D, Łabuzek B, Brela MZ, Twarda-Clapa A, Czub M, Musielak B, Surmiak E, Holak TA. The synthesis and characterization of tetramic acid derivatives as Mdm2-p53 inhibitors. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.03.089] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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49
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Schrey H, Backenköhler J, Kogler H, Plaumann M, Spiteller P. Aminotenuazonic Acid: Isolation, Structure Elucidation, Total Synthesis and Herbicidal Activity of a New Tetramic Acid from Fruiting Bodies ofLaccariaSpecies. Chemistry 2019; 25:10333-10341. [DOI: 10.1002/chem.201901405] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Revised: 05/24/2019] [Indexed: 02/03/2023]
Affiliation(s)
- Hedda Schrey
- Institut für Organische und Analytische ChemieUniversität Bremen Leobener Straße 7 28359 Bremen Germany
| | - Jana Backenköhler
- Institut für Organische und Analytische ChemieUniversität Bremen Leobener Straße 7 28359 Bremen Germany
| | - Herbert Kogler
- KITInstitut für Biologische Grenzflächen 4, Magnetische Resonanz Postfach 3640 76021 Karlsruhe Germany
| | - Markus Plaumann
- Institut für Biometrie und Medizinische InformatikOtto von Guericke Universität Magdeburg Leipziger Straße 44 (Haus 2) 39120 Magdeburg Germany
| | - Peter Spiteller
- Institut für Organische und Analytische ChemieUniversität Bremen Leobener Straße 7 28359 Bremen Germany
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50
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Zhao D, Han X, Wang D, Liu M, Gou J, Peng Y, Liu J, Li Y, Cao F, Zhang C. Bioactive 3-Decalinoyltetramic Acids Derivatives From a Marine-Derived Strain of the Fungus Fusarium equiseti D39. Front Microbiol 2019; 10:1285. [PMID: 31231352 PMCID: PMC6568041 DOI: 10.3389/fmicb.2019.01285] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2019] [Accepted: 05/23/2019] [Indexed: 11/28/2022] Open
Abstract
Two novel 3-decalinoyltetramic acid (3DTA) derivatives, namely fusarisetins C and D (1 and 2), and four known derivatives (3-6) were isolated from the marine-derived fungus Fusarium equiseti D39. Their structures were determined by spectroscopic data, vibrational circular dichroism (VCD) calculations, and X-ray crystallography. Compound 2 was identified as the first fusarisetin to possess an unprecedented carbon skeleton with a tetracyclic ring system comprised of a decalin moiety (6/6) and a tetramic acid moiety. A plausible biosynthetic pathway for the isolated compounds was proposed. All 3DTAs derivatives exhibited a potent phytotoxicity, and 5 also displayed a remarkable anti-phytopathogenic activity superior to the positive control resulting in damage of the cell membrane of Pseudomonas syringae and ensuing leakage of the intracellular components. Here, the phytotoxicity of fusarisetins has been reported for the first time. The OSMAC fermentation optimization approach to give 5 was performed by varying the culture media and salinities. The results showed that potato liquid medium with 1% salinity is the most favorable condition for the production of 5.
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Affiliation(s)
- Donglin Zhao
- Marine Agriculture Research Center, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, China
| | - Xiaobin Han
- Zunyi Branch, Guizhou Tobacco Company, Zunyi, China
| | - Dan Wang
- Marine Agriculture Research Center, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, China
| | - Minghong Liu
- Zunyi Branch, Guizhou Tobacco Company, Zunyi, China
| | - Jianyu Gou
- Zunyi Branch, Guizhou Tobacco Company, Zunyi, China
| | - Yulong Peng
- Zunyi Branch, Guizhou Tobacco Company, Zunyi, China
| | - Jing Liu
- Zunyi Branch, Guizhou Tobacco Company, Zunyi, China
| | - Yiqiang Li
- Marine Agriculture Research Center, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, China
| | - Fei Cao
- College of Pharmaceutical Sciences, Hebei University, Baoding, China
| | - Chengsheng Zhang
- Marine Agriculture Research Center, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, China
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