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Yang Y, Jeon Y, Dong Z, Yang JKW, Haddadi Moghaddam M, Kim DS, Oh DK, Lee J, Hentschel M, Giessen H, Kang D, Kim G, Tanaka T, Zhao Y, Bürger J, Maier SA, Ren H, Jung W, Choi M, Bae G, Chen H, Jeon S, Kim J, Lee E, Kang H, Park Y, Du Nguyen D, Kim I, Cencillo-Abad P, Chanda D, Jing X, Liu N, Martynenko IV, Liedl T, Kwak Y, Nam JM, Park SM, Odom TW, Lee HE, Kim RM, Nam KT, Kwon H, Jeong HH, Fischer P, Yoon J, Kim SH, Shim S, Lee D, Pérez LA, Qi X, Mihi A, Keum H, Shim M, Kim S, Jang H, Jung YS, Rossner C, König TAF, Fery A, Li Z, Aydin K, Mirkin CA, Seong J, Jeon N, Xu Z, Gu T, Hu J, Kwon H, Jung H, Alijani H, Aharonovich I, Kim J, Rho J. Nanofabrication for Nanophotonics. ACS NANO 2025; 19:12491-12605. [PMID: 40152322 DOI: 10.1021/acsnano.4c10964] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/29/2025]
Abstract
Nanofabrication, a pivotal technology at the intersection of nanoscale engineering and high-resolution patterning, has substantially advanced over recent decades. This technology enables the creation of nanopatterns on substrates crucial for developing nanophotonic devices and other applications in diverse fields including electronics and biosciences. Here, this mega-review comprehensively explores various facets of nanofabrication focusing on its application in nanophotonics. It delves into high-resolution techniques like focused ion beam and electron beam lithography, methods for 3D complex structure fabrication, scalable manufacturing approaches, and material compatibility considerations. Special attention is given to emerging trends such as the utilization of two-photon lithography for 3D structures and advanced materials like phase change substances and 2D materials with excitonic properties. By highlighting these advancements, the review aims to provide insights into the ongoing evolution of nanofabrication, encouraging further research and application in creating functional nanostructures. This work encapsulates critical developments and future perspectives, offering a detailed narrative on the state-of-the-art in nanofabrication tailored for both new researchers and seasoned experts in the field.
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Affiliation(s)
- Younghwan Yang
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Youngsun Jeon
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Zhaogang Dong
- Institute of Materials Research and Engineering (IMRE), Agency for Science, Technology and Research (A*STAR), Singapore 138634, Singapore
- Department of Materials Science and Engineering, National University of Singapore, Singapore 117575, Singapore
- Singapore University of Technology and Design, Singapore 487372, Singapore
| | - Joel K W Yang
- Singapore University of Technology and Design, Singapore 487372, Singapore
| | - Mahsa Haddadi Moghaddam
- Department of Physics, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Dai-Sik Kim
- Department of Physics, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Dong Kyo Oh
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Jihae Lee
- Department of Chemical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Mario Hentschel
- fourth Physics Institute and Research Center SCoPE, University of Stuttgart, Stuttgart 70569, Germany
| | - Harald Giessen
- fourth Physics Institute and Research Center SCoPE, University of Stuttgart, Stuttgart 70569, Germany
| | - Dohyun Kang
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Gyeongtae Kim
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Takuo Tanaka
- RIKEN Center for Advanced Photonics, Wako 351-0198, Japan
- Institute of Post-LED Photonics, Tokushima University, Tokushima 770-8501, Japan
| | - Yang Zhao
- Department of Electrical and Computer Engineering, Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Johannes Bürger
- Chair in Hybrid Nanosystems, Nanoinstitute Munich, Ludwig-Maximilians-Universität, Munich 80539, Germany
| | - Stefan A Maier
- School of Physics and Astronomy, Monash University, Clayton, VIC 3800, Australia
- Department of Physics, Imperial College London, London SW72AZ, United Kingdom
| | - Haoran Ren
- School of Physics and Astronomy, Monash University, Clayton, VIC 3800, Australia
| | - Wooik Jung
- Department of Creative Convergence Engineering, Hanbat National University, Daejeon, 34158, Republic of Korea
| | - Mansoo Choi
- Global Frontier Center for Multiscale Energy Systems, Seoul National University, Seoul 08826, Republic of Korea
- Department of Mechanical Engineering, Seoul National University, Seoul 08826, Republic of Korea
| | - Gwangmin Bae
- Department of Materials Science and Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Haomin Chen
- Department of Materials Science and Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Seokwoo Jeon
- Department of Materials Science and Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Jaekyung Kim
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Eunji Lee
- Department of Chemical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Hyunjung Kang
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Yujin Park
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Dang Du Nguyen
- Department of Biophysics, Sungkyunkwan University, Suwon 16419, Republic of Korea
- Department of Intelligent Precision Healthcare Convergence, Sungkyunkwan University, Suwon 16419, Republic of Korea
| | - Inki Kim
- Department of Biophysics, Sungkyunkwan University, Suwon 16419, Republic of Korea
- Department of Intelligent Precision Healthcare Convergence, Sungkyunkwan University, Suwon 16419, Republic of Korea
| | - Pablo Cencillo-Abad
- NanoScience Technology Center, University of Central Florida, Florida 32826, United States
| | - Debashis Chanda
- NanoScience Technology Center, University of Central Florida, Florida 32826, United States
- Department of Physics, University of Central Florida, Florida 32816, United States
- The College of Optics and Photonics, University of Central Florida, Orlando, Florida 32816, United States
| | - Xinxin Jing
- Second Physics Institute, University of Stuttgart Pfaffenwaldring 57, Stuttgart 70569, Germany
- Max Planck Institute for Solid State Research, Heisenbergstrasse 1, Stuttgart D-70569, Germany
| | - Na Liu
- Second Physics Institute, University of Stuttgart Pfaffenwaldring 57, Stuttgart 70569, Germany
- Max Planck Institute for Solid State Research, Heisenbergstrasse 1, Stuttgart D-70569, Germany
| | - Irina V Martynenko
- Faculty of Physics and Center for NanoScience (CeNS) Ludwig-Maxim8ilians-University, Munich 80539, Germany
- Skolkovo Institute of Science and Technology, Moscow 121205, Russia
| | - Tim Liedl
- Faculty of Physics and Center for NanoScience (CeNS) Ludwig-Maxim8ilians-University, Munich 80539, Germany
| | - Yuna Kwak
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Jwa-Min Nam
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Sang-Min Park
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Teri W Odom
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Hye-Eun Lee
- Department of Materials Science and Engineering, Seoul National University, Seoul 08826, Republic of Korea
| | - Ryeong Myeong Kim
- Department of Materials Science and Engineering, Seoul National University, Seoul 08826, Republic of Korea
| | - Ki Tae Nam
- Department of Materials Science and Engineering, Seoul National University, Seoul 08826, Republic of Korea
| | - Hyunah Kwon
- Max Planck Institute for Medical Research, Heidelberg 69120, Germany
- Institute for Molecular Systems Engineering and Advanced Materials, Heidelberg University, Heidelberg 69120, Germany
| | - Hyeon-Ho Jeong
- School of Electrical Engineering and Computer Science, Gwangju Institute of Science and Technology (GIST), Gwangju, 61005, Republic of Korea
| | - Peer Fischer
- Max Planck Institute for Medical Research, Heidelberg 69120, Germany
- Institute for Molecular Systems Engineering and Advanced Materials, Heidelberg University, Heidelberg 69120, Germany
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul 03722, Republic of Korea
- Department of Nano Biomedical Engineering (NanoBME), Yonsei University, Seoul, 03722, Republic of Korea
| | - Jiwon Yoon
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
| | - Shin-Hyun Kim
- Department of Biomedical Engineering, Yonsei University, Wonju 26493, Republic of Korea
| | - Sangmin Shim
- Department of Biomedical Engineering, Yonsei University, Wonju 26493, Republic of Korea
| | - Dasol Lee
- Department of Biomedical Engineering, Yonsei University, Wonju 26493, Republic of Korea
| | - Luis A Pérez
- Institute of Materials Science of Barcelona (ICMAB-CSIC), Bellaterra, 08193 Spain
| | - Xiaoyu Qi
- Institute of Materials Science of Barcelona (ICMAB-CSIC), Bellaterra, 08193 Spain
| | - Agustin Mihi
- Institute of Materials Science of Barcelona (ICMAB-CSIC), Bellaterra, 08193 Spain
| | - Hohyun Keum
- Digital Health Care R&D Department, Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
| | - Moonsub Shim
- Department of Materials Science and Engineering, University of Illinois, Urbana-Champaign, Illinois 61801, United States
| | - Seok Kim
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Hanhwi Jang
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
| | - Yeon Sik Jung
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
| | - Christian Rossner
- Leibniz-Institut für Polymerforschung Dresden e. V., Dresden 01069, Germany
- Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, Dresden 01069, Germany
- Dresden Center for Intelligent Materials (DCIM), Technische Universität Dresden, Dresden 01069, Germany
- Department of Polymers, University of Chemistry and Technology Prague, Prague 6 166 28, Czech Republic
| | - Tobias A F König
- Leibniz-Institut für Polymerforschung Dresden e. V., Dresden 01069, Germany
- Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, Dresden 01069, Germany
- Dresden Center for Intelligent Materials (DCIM), Technische Universität Dresden, Dresden 01069, Germany
- Center for Advancing Electronics Dresden (cfaed), Technische Universität Dresden, Dresden 01069, Germany
| | - Andreas Fery
- Leibniz-Institut für Polymerforschung Dresden e. V., Dresden 01069, Germany
- Center for Advancing Electronics Dresden (cfaed), Technische Universität Dresden, Dresden 01069, Germany
- Physical Chemistry of Polymeric Materials, Technische Universität Dresden, Dresden 01069, Germany
| | - Zhiwei Li
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Mayland 20742, United States
| | - Koray Aydin
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Electrical and Computer Engineering, Northwestern University, Evanston, Illinois 60208, United States
| | - Chad A Mirkin
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Electrical and Computer Engineering, Northwestern University, Evanston, Illinois 60208, United States
| | - Junhwa Seong
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Nara Jeon
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Zhiyun Xu
- Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Tian Gu
- Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Juejun Hu
- Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Hyounghan Kwon
- Center for Quantum Information, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea
- Division of Quantum Information, KIST School, Korea University of Science and Technology, Seoul 02792, Republic of Korea
| | - Hojoong Jung
- Center for Quantum Information, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea
| | - Hossein Alijani
- School of Mathematical and Physical Sciences, Faculty of Science, University of Technology Sydney, Ultimo, New South Wales 2007, Australia
- ARC Centre of Excellence for Transformative Meta-Optical Systems (TMOS), University of Technology Sydney, Ultimo, New South Wales 2007, Australia
| | - Igor Aharonovich
- School of Mathematical and Physical Sciences, Faculty of Science, University of Technology Sydney, Ultimo, New South Wales 2007, Australia
- ARC Centre of Excellence for Transformative Meta-Optical Systems (TMOS), University of Technology Sydney, Ultimo, New South Wales 2007, Australia
| | - Joohoon Kim
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
| | - Junsuk Rho
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
- Department of Chemical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
- Department of Electrical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
- POSCO-POSTECH-RIST Convergence Research Center for Flat Optics and Metaphotonics, Pohang 37673, Republic of Korea
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Zhang Z, Zhang Z, Hou J, Zhao Y, Jia J, Wang J, Zhao J, Lian C, Dong A, Zhao D, Li W. Stress-induced self-assembly of hierarchically twisted stripe arrays. Sci Bull (Beijing) 2025; 70:704-711. [PMID: 39755466 DOI: 10.1016/j.scib.2024.12.045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2024] [Revised: 11/07/2024] [Accepted: 12/24/2024] [Indexed: 01/06/2025]
Abstract
Hierarchical organization is prevalent in nature, yet the artificial construction of hierarchical materials featuring asymmetric structures remains a big challenge. Herein, we report a stress-induced self-assembly strategy for the synthesis of hierarchically twisted stripe arrays (HTSAs) with mesoporous structures. A soft and thin mesostructured film assembled by micelles and TiO2 oligomers is the prerequisite. Then, the external stress coming from the exfoliation process triggers the deformation of this mesostructured film into hierarchically twisted structures. The stripe width and twist degree can be well manipulated by adjusting the cross-linking degree and thickness of the mesostructured films. Furthermore, this strategy is facile and versatile to synthesize HTSAs with diverse components, including carbon, Al2O3 and ZrO2. We find that mesoporous TiO2 HTSAs can serve as an ideal integrator for adsorption-enrichment-detection process, exhibiting a rapid and high adsorption capacity towards molecules at low concentrations and enabling the subsequent surface-enhanced Raman scattering (SERS) detection. Such twisted stripe arrays achieve 2.3-fold and 5.6-fold enhancements in SERS compared with flat surfaces and solution conditions, respectively, due to the increased Raman scattering among the hierarchical, twisted, and mesoporous structures.
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Affiliation(s)
- Zhenghao Zhang
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Zekai Zhang
- School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Junyu Hou
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Yiyue Zhao
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Jia Jia
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Jiwei Wang
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Jie Zhao
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Cheng Lian
- School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Angang Dong
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Dongyuan Zhao
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China
| | - Wei Li
- Department of Chemistry, Laboratory of Advance Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, and iChEM, Fudan University, Shanghai 200433, China.
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Chellam NS, Calcaterra HA, Xiong Q, Schatz GC, Mirkin CA. Organic Modulators Enable Morphological Diversity in Colloidal Crystals Engineered with DNA. ACS NANO 2025; 19:6520-6528. [PMID: 39902589 DOI: 10.1021/acsnano.4c17881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2025]
Abstract
Colloidal crystal engineering with DNA is a powerful way of generating a wide variety of crystals spanning over 90 different symmetries. However, in many cases, crystals with well-defined habits are difficult, if not impossible, to make, in part due to rapid crystal defect formation and propagation. This is especially true in the case of face-centered cubic (FCC) structures. Herein, we report a strategy that uses formamide as a chemical modulator to slow down colloidal crystal growth, which decreases defect formation and yields higher-quality crystals. Formamide forms hydrogen bonds with DNA bases and destabilizes the DNA duplex; in the context of colloidal crystallization, formamide leads to the disassembly of undercoordinated particles (defect architectures) and facilitates their reassembly into structures with the maximum number of nearest-neighbor contacts and DNA bonds. When targeting an FCC lattice comprised of DNA-modified spherical 20 nm particles, formamide promotes the formation of its Wulff polyhedron (a truncated octahedron), never observed before in colloidal crystal engineering with DNA. Importantly, kinetic habits, including tetrahedra, octahedra, icosahedra, and decahedra, are also observed depending on formamide concentration.
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Affiliation(s)
- Nikhil S Chellam
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
| | - Heather A Calcaterra
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
| | - Qinsi Xiong
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - George C Schatz
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Chad A Mirkin
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
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Zhang J, Yao D, Hua W, Jin J, Jiang W. An Alternating-Electric-Field-Driven Assembly of DNA Nanoparticles into FCC Crystals. NANO LETTERS 2024; 24:13965-13971. [PMID: 39373902 DOI: 10.1021/acs.nanolett.4c03167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/08/2024]
Abstract
Using an alternating electric field is a versatile way to control particle assembly. Programming DNA-AuNP assembly via an electric field remains a significant challenge despite the negative charge of DNA. In DNA-AuNP assembly, a critical percolation state is delicately constructed, where the DNA bond is loosely connected and sensitive to electric fields. In this state, an FCC crystal structure can be successfully constructed by applying a high-frequency electric field to assemble DNA-AuNPs without altering the temperature, which is favorable for temperature-sensitive systems. In addition, the regulation of electric fields can be adjusted through parameters such as the frequency and voltage, which offers more precise control than temperature regulation does. The frequency and voltage can be used to precisely tune the phase structure of DNA-AuNPs from dissolved to disordered or FCC. These findings broaden the potential of DNA-based crystal engineering, revealing new opportunities in electronic nanocomposites and devices.
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Affiliation(s)
- Jianing Zhang
- State Key Laboratory of New Textile Materials and Advanced Processing Technologies and Key Laboratory of Textile Fiber and Products of the Ministry of Education, College of Materials Science and Engineering, Wuhan Textile University, Wuhan 430200, China
| | - Dongbao Yao
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Polymer Science and Engineering, School of Chemistry and Materials Science, Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), University of Science and Technology of China, Hefei 230026, Anhui, China
| | - Wenqiang Hua
- Shanghai Synchrotron Radiation Facility, Zhangjiang Laboratory, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai 201204, China
| | - Jing Jin
- State Key Laboratory of New Textile Materials and Advanced Processing Technologies and Key Laboratory of Textile Fiber and Products of the Ministry of Education, College of Materials Science and Engineering, Wuhan Textile University, Wuhan 430200, China
| | - Wei Jiang
- State Key Laboratory of New Textile Materials and Advanced Processing Technologies and Key Laboratory of Textile Fiber and Products of the Ministry of Education, College of Materials Science and Engineering, Wuhan Textile University, Wuhan 430200, China
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Calcaterra HA, Chellam NS, Lee B, Schatz GC, Mirkin CA. High Temperature, Isothermal Growth Promotes Close Packing and Thermal Stability in DNA-Engineered Colloidal Crystals. ACS NANO 2024; 18:28268-28278. [PMID: 39373137 DOI: 10.1021/acsnano.4c09308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/08/2024]
Abstract
We report a strategy to accelerate the synthesis and increase the crystallinity of colloidal crystals (CCs) engineered with DNA. Specifically, by holding the DNA-modified Au particle building blocks above the Tm of the DNA bonding elements (i.e., free from the particles), but slightly below the Tm of the anticipated CC during the assembly process, crystallinity is increased, and enthalpically favored phases with high degrees of facet registration are observed. We studied the utility of this approach with systems for which the commonly adopted slow-cooling approach yielded primarily amorphous aggregates. In particular, we used it to synthesize high-volume fraction CCs from large (80 nm) anisotropic nanoparticles (cubes and rhombic dodecahedra) with short (<14 nm) DNA designed to restrict the degrees of freedom for the DNA bonds and maintain the anisotropy of the particle building block. Small-angle X-ray scattering and electron microscopy studies show that the crystalline phases synthesized via this method are more thermally stable than their corresponding aggregate phases, likely due to an increased number of DNA-DNA bonds between particles. Crystal size tunability (between 0.5 and 15 μm edge lengths) and epitaxial growth were demonstrated using this strategy by modulating the NaCl concentration in tandem with previously synthesized CC nuclei. Taken together, this isothermal strategy demonstrates how to deliberately crystallize a wide variety of anisotropic colloidal materials and expands the phase space accessible to nanoparticles modified with DNA.
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Affiliation(s)
- Heather A Calcaterra
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
| | - Nikhil S Chellam
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
| | - Byeongdu Lee
- X-ray Science Division, Advanced Photon Source, Argonne National Laboratory, Argonne, Illinois 60439, United States
| | - George C Schatz
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Chad A Mirkin
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, 60208, United States
- International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
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Reinertsen RJE, Kewalramani S, Jiménez-Ángeles F, Weigand SJ, Bedzyk MJ, Olvera de la Cruz M. Reexpansion of charged nanoparticle assemblies in concentrated electrolytes. Proc Natl Acad Sci U S A 2024; 121:e2316537121. [PMID: 38289958 PMCID: PMC10861876 DOI: 10.1073/pnas.2316537121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 12/27/2023] [Indexed: 02/01/2024] Open
Abstract
Electrostatic forces in solutions are highly relevant to a variety of fields, ranging from electrochemical energy storage to biology. However, their manifestation in concentrated electrolytes is not fully understood, as exemplified by counterintuitive observations of colloidal stability and long-ranged repulsions in molten salts. Highly charged biomolecules, such as DNA, respond sensitively to ions in dilute solutions. Here, we use non-base-pairing DNA-coated nanoparticles (DNA-NP) to analyze electrostatic interactions in concentrated salt solutions. Despite their negative charge, these conjugates form colloidal crystals in solutions of sufficient divalent cation concentration. We utilize small-angle X-ray scattering (SAXS) to study such DNA-NP assemblies across the full accessible concentration ranges of aqueous CaCl2, MgCl2, and SrCl2 solutions. SAXS shows that the crystallinity and phases of the assembled structures vary with cation type. For all tested salts, the aggregates contract with added ions at low salinities and then begin expanding above a cation-dependent threshold salt concentration. Wide-angle X-ray scattering (WAXS) reveals enhanced positional correlations between ions in the solution at high salt concentrations. Complementary molecular dynamics simulations show that these ion-ion interactions reduce the favorability of dense ion configurations within the DNA brushes below that of the bulk solution. Measurements in solutions with lowered permittivity demonstrate a simultaneous increase in ion coupling and decrease in the concentration at which aggregate expansion begins, thus confirming the connection between these phenomena. Our work demonstrates that interactions between charged objects continue to evolve considerably into the high-concentration regime, where classical theories project electrostatics to be of negligible consequence.
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Affiliation(s)
- Roger J. E. Reinertsen
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL60208
| | - Sumit Kewalramani
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL60208
| | - Felipe Jiménez-Ángeles
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL60208
| | - Steven J. Weigand
- DuPont-Northwestern-Dow Collaborative Access Team, Northwestern University Synchrotron Research Center, Advanced Photon Source, Argonne, IL60439
| | - Michael J. Bedzyk
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL60208
- Department of Physics and Astronomy, Northwestern University, Evanston, IL60208
| | - Monica Olvera de la Cruz
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL60208
- Department of Physics and Astronomy, Northwestern University, Evanston, IL60208
- Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL60208
- Department of Chemistry, Northwestern University, Evanston, IL60208
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7
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Prusty D, Gallegos A, Wu J. Unveiling the Role of Electrostatic Forces on Attraction between Opposing Polyelectrolyte Brushes. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:2064-2078. [PMID: 38236763 DOI: 10.1021/acs.langmuir.3c02762] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/31/2024]
Abstract
Electrostatic interaction and molecular excluded-volume effects are responsible for a plethora of nonintuitive phenomena in soft-matter systems, including local charge inversion and attraction between similar charges. In the current work, we study the surface forces and swelling behavior of opposing polyelectrolyte brushes using a classical density functional theory that accounts for electrostatic and excluded-volume correlations. We observe that the detachment pressure between similarly charged brushes is sensitive to salt concentration in both the osmotic and salted regimes and can be negative in the presence of multivalent counterions. A comparison of the theoretical results with the mean-field predictions unravels the role of correlation effects in determining the surface forces and brush structure. For systems containing multivalent counterions, the detachment pressure attains negative values at an intermediate brush-brush separation, and the attractive region in the pressure vs distance plot is magnified in terms of both the depth and width of attraction with increasing counterion valency. However, the interbrush attraction vanishes when the size-induced correlations are switched off. We also investigated the role of counterion size and polymer chain length on the detachment pressure. It is found that smaller counterions are more effective in neutralizing the polymer charge than bigger counterions, leading to a reduced interbrush repulsion and, in some cases, attraction between like-charged brushes at intermediate distances. Meanwhile, varying the chain length of the grafted polymers only shifts the location of the attraction basin, with little influence on the interaction strength. The theoretical predictions show qualitative agreement with experimental observations and offer valuable insights into the interaction between similarly charged polymer brushes in the presence of multivalent ions.
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Affiliation(s)
- Debadutta Prusty
- Department of Chemical and Environmental Engineering, University of California, Riverside, California 92507, United States
| | - Alejandro Gallegos
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Jianzhong Wu
- Department of Chemical and Environmental Engineering, University of California, Riverside, California 92507, United States
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8
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Ma N, Sun M, Shi H, Xue L, Zhang M, Yang W, Dang Y, Qiao Z. A Colorimetric/Fluorescent Dual-Mode Aptasensor for Salmonella Based on the Magnetic Separation of Aptamers and a DNA-Nanotriangle Programmed Multivalent Aptamer. Foods 2023; 12:3853. [PMID: 37893744 PMCID: PMC10606715 DOI: 10.3390/foods12203853] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 10/09/2023] [Accepted: 10/18/2023] [Indexed: 10/29/2023] Open
Abstract
Salmonella infection has emerged as a global health threat, causing death, disability, and socioeconomic disruption worldwide. The rapid and sensitive detection of Salmonella is of great significance in guaranteeing food safety. Herein, we developed a colorimetric/fluorescent dual-mode method based on a DNA-nanotriangle programmed multivalent aptamer for the sensitive detection of Salmonella. In this system, aptamers are precisely controlled and assembled on a DNA nanotriangle structure to fabricate a multivalent aptamer (NTri-Multi-Apt) with enhanced binding affinity and specificity toward Salmonella. The NTri-Multi-Apt was designed to carry many streptavidin-HRPs for colorimetric read-outs and a large load of Sybr green I in the dsDNA scaffold for the output of a fluorescent signal. Therefore, combined with the magnetic separation of aptamers and the prefabricated NTri-Multi-Apt, the dual-mode approach achieved simple and sensitive detection, with LODs of 316 and 60 CFU/mL for colorimetric and fluorescent detection, respectively. Notably, the fluorescent mode provided a self-calibrated and fivefold-improved sensitivity over colorimetric detection. Systematic results also revealed that the proposed dual-mode method exhibited high specificity and applicability for milk, egg white, and chicken meat samples, serving as a promising tool for real bacterial sample testing. As a result, the innovative dual-mode detection method showed new insights for the detection of other pathogens.
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Affiliation(s)
- Na Ma
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Mengni Sun
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Hanxing Shi
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Liangliang Xue
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Min Zhang
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Wenge Yang
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Yali Dang
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
| | - Zhaohui Qiao
- College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo University, Ningbo 315800, China
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9
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Mirkin CA, Petrosko SH. Inspired Beyond Nature: Three Decades of Spherical Nucleic Acids and Colloidal Crystal Engineering with DNA. ACS NANO 2023; 17:16291-16307. [PMID: 37584399 DOI: 10.1021/acsnano.3c06564] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/17/2023]
Abstract
The conception, synthesis, and invention of a nanostructure, now known as the spherical nucleic acid, or SNA, in 1996 marked the advent of a new field of chemistry. Over the past three decades, the SNA and its analogous anisotropic equivalents have provided an avenue for us to think about some of the most fundamental concepts in chemistry in new ways and led to technologies that are significantly impacting fields from medicine to materials science. A prime example is colloidal crystal engineering with DNA, the framework for using SNAs and related structures to synthesize programmable matter. Herein, we document the evolution of this framework, which was initially inspired by nature, and describe how it now allows researchers to chart paths to move beyond it, as programmable matter with real-world significance is envisioned and created.
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Affiliation(s)
- Chad A Mirkin
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
| | - Sarah Hurst Petrosko
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
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10
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Yan X, Wang Y, Ma N, Yu Y, Dai L, Tian Y. Dynamically Reconfigurable DNA Origami Crystals Driven by a Designated Path Diagram. J Am Chem Soc 2023; 145:3978-3986. [PMID: 36775921 DOI: 10.1021/jacs.2c10755] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/14/2023]
Abstract
Constructing adaptable and switchable crystal structures renders it possible to dynamically control the properties and functions of adaptive materials, thereby expanding the potential application of these structures in fields such as optics, biology, and catalysis. Recently, researchers have developed various dynamic crystals possessing phase transition abilities. However, manufacturing switchable crystals with multiple-phase-transition ability by integrating various responsive behaviors into different dimensions of a single lattice remains considerably challenging. Herein, we built a set of dynamically reconfigurable DNA origami crystals by orthogonally integrating multiple dynamic effectors into the prescribed dimensions of the octahedral DNA origami frames. Further, we independently manipulated and logically combined the dynamic behaviors of the effectors in different dimensions. The initial mother phase and three derived daughter phases were interconnected into a path diagram by six elementary paths. Furthermore, these paths could be superimposed under multiple stimulus instructions by design to obtain the desired intricate transition routes. Moreover, finer manipulations were also applied to these paths to obtain extra new phase stations for the path diagram. To conveniently detect these phase transitions, a color-based visualization strategy was developed that converted the microscopic symmetry transformation of the lattices into macroscopic color changes that could be observed via a fluorescence microscope. Hence, this strategy lays the foundation for artificially constructing biomimetic functional crystals.
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Affiliation(s)
- Xuehui Yan
- College of Engineering and Applied Sciences, State Key Laboratory of Analytical Chemistry for Life Science, Jiangsu Key Laboratory of Artificial Functional Materials, Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing 210023, China
| | - Yong Wang
- College of Engineering and Applied Sciences, State Key Laboratory of Analytical Chemistry for Life Science, Jiangsu Key Laboratory of Artificial Functional Materials, Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing 210023, China
| | - Ningning Ma
- College of Engineering and Applied Sciences, State Key Laboratory of Analytical Chemistry for Life Science, Jiangsu Key Laboratory of Artificial Functional Materials, Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing 210023, China
| | - Yifan Yu
- College of Engineering and Applied Sciences, State Key Laboratory of Analytical Chemistry for Life Science, Jiangsu Key Laboratory of Artificial Functional Materials, Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing 210023, China
| | - Lizhi Dai
- College of Engineering and Applied Sciences, State Key Laboratory of Analytical Chemistry for Life Science, Jiangsu Key Laboratory of Artificial Functional Materials, Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing 210023, China
| | - Ye Tian
- College of Engineering and Applied Sciences, State Key Laboratory of Analytical Chemistry for Life Science, Jiangsu Key Laboratory of Artificial Functional Materials, Chemistry and Biomedicine Innovation Center, Nanjing University, Nanjing 210023, China
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11
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Xiong Q, Lee OS, Mirkin CA, Schatz G. Ethanol-Induced Condensation and Decondensation in DNA-Linked Nanoparticles: A Nucleosome-like Model for the Condensed State. J Am Chem Soc 2023; 145:706-716. [PMID: 36573457 DOI: 10.1021/jacs.2c11834] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Inspired by the conventional use of ethanol to induce DNA precipitation, ethanol condensation has been applied as a routine method to dynamically tune "bond" lengths (i.e., the surface-to-surface distances between adjacent nanoparticles that are linked by DNA) and thermal stabilities of colloidal crystals involving DNA-linked nanoparticles. However, the underlying mechanism of how the DNA bond that links gold nanoparticles changes in this class of colloidal crystals in response to ethanol remains unclear. Here, we conducted a series of all-atom molecular dynamic (MD) simulations to explore the free energy landscape for DNA condensation and decondensation. Our simulations confirm that DNA condensation is energetically much more favorable under 80% ethanol conditions than in pure water, as a result of ethanol's role in enhancing electrostatic interactions between oppositely charged species. Moreover, the condensed DNA adopts B-form in pure water and A-form in 80% ethanol, which indicates that the higher-order transition does not affect DNA's conformational preferences. We further propose a nucleosome-like supercoiled model for the DNA condensed state, and we show that the DNA end-to-end distance derived from this model matches the experimentally measured DNA bond length of about 3 nm in the fully condensed state for DNA where the measured length is 16 nm in water. Overall, this study provides an atomistic understanding of the mechanism underlying ethanol-induced condensation and water-induced decondensation, while our proposed nucleosome-like model allows the design of new strategies for interpreting experimental studies of DNA condensation.
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Affiliation(s)
- Qinsi Xiong
- Department of Chemistry, Northwestern University, Evanston, Illinois60208-3113, United States
| | - One-Sun Lee
- Department of Chemistry, Northwestern University, Evanston, Illinois60208-3113, United States
| | - Chad A Mirkin
- Department of Chemistry, Northwestern University, Evanston, Illinois60208-3113, United States.,Department of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois60208, United States.,International Institute for Nanotechnology, Northwestern University, Evanston, Illinois60208, United States
| | - George Schatz
- Department of Chemistry, Northwestern University, Evanston, Illinois60208-3113, United States
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12
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Nepal D, Kang S, Adstedt KM, Kanhaiya K, Bockstaller MR, Brinson LC, Buehler MJ, Coveney PV, Dayal K, El-Awady JA, Henderson LC, Kaplan DL, Keten S, Kotov NA, Schatz GC, Vignolini S, Vollrath F, Wang Y, Yakobson BI, Tsukruk VV, Heinz H. Hierarchically structured bioinspired nanocomposites. NATURE MATERIALS 2023; 22:18-35. [PMID: 36446962 DOI: 10.1038/s41563-022-01384-1] [Citation(s) in RCA: 132] [Impact Index Per Article: 66.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2020] [Accepted: 09/17/2022] [Indexed: 06/16/2023]
Abstract
Next-generation structural materials are expected to be lightweight, high-strength and tough composites with embedded functionalities to sense, adapt, self-repair, morph and restore. This Review highlights recent developments and concepts in bioinspired nanocomposites, emphasizing tailoring of the architecture, interphases and confinement to achieve dynamic and synergetic responses. We highlight cornerstone examples from natural materials with unique mechanical property combinations based on relatively simple building blocks produced in aqueous environments under ambient conditions. A particular focus is on structural hierarchies across multiple length scales to achieve multifunctionality and robustness. We further discuss recent advances, trends and emerging opportunities for combining biological and synthetic components, state-of-the-art characterization and modelling approaches to assess the physical principles underlying nature-inspired design and mechanical responses at multiple length scales. These multidisciplinary approaches promote the synergetic enhancement of individual materials properties and an improved predictive and prescriptive design of the next era of structural materials at multilength scales for a wide range of applications.
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Affiliation(s)
- Dhriti Nepal
- Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright-Patterson AFB, OH, USA.
| | - Saewon Kang
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Katarina M Adstedt
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Krishan Kanhaiya
- Department of Chemical and Biological Engineering, University of Colorado at Boulder, Boulder, CO, USA
| | - Michael R Bockstaller
- Department of Materials Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, USA
| | - L Catherine Brinson
- Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC, USA
| | - Markus J Buehler
- Department of Civil and Environmental Engineering, MIT, Cambridge, MA, USA
| | - Peter V Coveney
- Department of Chemistry, University College London, London, UK
| | - Kaushik Dayal
- Department of Civil and Environmental Engineering, Carnegie Mellon University, Pittsburgh, PA, USA
| | - Jaafar A El-Awady
- Department of Mechanical Engineering, Johns Hopkins University, Baltimore, MD, USA
| | - Luke C Henderson
- Institute for Frontier Materials, Deakin University, Waurn Ponds, Victoria, Australia
| | - David L Kaplan
- Department of Biomedical Engineering, Tufts University, Medford, MA, USA
| | - Sinan Keten
- Department of Mechanical Engineering, Northwestern University, Evanston, IL, USA
| | - Nicholas A Kotov
- Department of Chemical Engineering, University of Michigan, Ann Arbor, MI, USA
| | - George C Schatz
- Department of Chemistry, Northwestern University, Evanston, IL, USA
| | - Silvia Vignolini
- Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK
| | | | - Yusu Wang
- Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla, CA, USA
| | - Boris I Yakobson
- Department of Materials Science and Nanoengineering, Rice University, Houston, TX, USA
- Department of Chemistry, Rice University, Houston, TX, USA
| | - Vladimir V Tsukruk
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, GA, USA.
| | - Hendrik Heinz
- Department of Chemical and Biological Engineering, University of Colorado at Boulder, Boulder, CO, USA.
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13
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Mahapatra A, Barik S, Satish L, Chakraborty M, Sarkar M. Assessing the Suitability of a Dicationic Ionic Liquid as a Stabilizing Material for the Storage of DNA in Aqueous Medium. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:14857-14868. [PMID: 36394977 DOI: 10.1021/acs.langmuir.2c02530] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
The present study has been undertaken with an objective to find out a suitable medium for the long-term stability and storage of the ct-DNA structure in aqueous solution. For this purpose, the potential of a pyrrolidinium-based dicationic ionic liquid (DIL) in stabilizing ct-DNA structure has been investigated by following the DNA-DIL interaction. Additionally, in order to understand the fundamental aspects regarding the DNA-DIL interaction in a comprehensive manner, studies are also done by employing structurally similar monocationic ionic liquids (MILs). The investigations have been carried out both at ensemble-average and single molecular level by using various spectroscopic techniques. The molecular docking study has also been performed to throw more light into the experimental observations. The combined steady-state and time-resolved fluorescence, fluorescence correlation spectroscopy, and circular dichroism measurements have demonstrated that DILs can effectively be used as better storage media for ct-DNA as compared to MILs. Investigations have also shown that the extra electrostatic interaction between the cationic head group of DIL and the phosphate backbone of DNA is primarily responsible for providing better stabilization to ct-DNA, retaining its native structure in aqueous medium. The outcomes of the present study are also expected to provide valuable insights in designing new polycationic IL systems that can be used in nucleic acid-based applications.
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Affiliation(s)
- Amita Mahapatra
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Khurda, Bhubaneswar752050, Odisha, India
- Homi Bhabha National Institute (HBNI), Mumbai400094, India
- Centre for Interdisciplinary Sciences (CIS), NISER, Jatni, Khurda, Bhubaneswar752050, Odisha, India
| | - Sahadev Barik
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Khurda, Bhubaneswar752050, Odisha, India
- Homi Bhabha National Institute (HBNI), Mumbai400094, India
- Centre for Interdisciplinary Sciences (CIS), NISER, Jatni, Khurda, Bhubaneswar752050, Odisha, India
| | - Lakkoji Satish
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Khurda, Bhubaneswar752050, Odisha, India
- Homi Bhabha National Institute (HBNI), Mumbai400094, India
- Centre for Interdisciplinary Sciences (CIS), NISER, Jatni, Khurda, Bhubaneswar752050, Odisha, India
| | - Manjari Chakraborty
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Khurda, Bhubaneswar752050, Odisha, India
- Homi Bhabha National Institute (HBNI), Mumbai400094, India
- Centre for Interdisciplinary Sciences (CIS), NISER, Jatni, Khurda, Bhubaneswar752050, Odisha, India
| | - Moloy Sarkar
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Khurda, Bhubaneswar752050, Odisha, India
- Homi Bhabha National Institute (HBNI), Mumbai400094, India
- Centre for Interdisciplinary Sciences (CIS), NISER, Jatni, Khurda, Bhubaneswar752050, Odisha, India
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14
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Samanta D, Zhou W, Ebrahimi SB, Petrosko SH, Mirkin CA. Programmable Matter: The Nanoparticle Atom and DNA Bond. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2022; 34:e2107875. [PMID: 34870875 DOI: 10.1002/adma.202107875] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 11/22/2021] [Indexed: 05/21/2023]
Abstract
Colloidal crystal engineering with DNA has led to significant advances in bottom-up materials synthesis and a new way of thinking about fundamental concepts in chemistry. Here, programmable atom equivalents (PAEs), comprised of nanoparticles (the "atoms") functionalized with DNA (the "bonding elements"), are assembled through DNA hybridization into crystalline lattices. Unlike atomic systems, the "atom" (e.g., the nanoparticle shape, size, and composition) and the "bond" (e.g., the DNA length and sequence) can be tuned independently, yielding designer materials with unique catalytic, optical, and biological properties. In this review, nearly three decades of work that have contributed to the evolution of this class of programmable matter is chronicled, starting from the earliest examples based on gold-core PAEs, and then delineating how advances in synthetic capabilities, DNA design, and fundamental understanding of PAE-PAE interactions have led to new classes of functional materials that, in several cases, have no natural equivalent.
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Affiliation(s)
- Devleena Samanta
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
| | - Wenjie Zhou
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
| | - Sasha B Ebrahimi
- Department of Chemical Engineering and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
| | - Sarah Hurst Petrosko
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
| | - Chad A Mirkin
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
- Department of Chemical Engineering and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
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15
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Du Y, Zhou X, Jin J, Liang H, Men Y, Jiang W. A two-stage energy tuning strategy via salt and glycine programmed DNA-engineered crystals. Chem Commun (Camb) 2021; 57:13578-13581. [PMID: 34846054 DOI: 10.1039/d1cc05432e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
To obtain high-quality DNA-engineered crystals at room temperature, a two-stage energy tuning strategy by first adding NaCl and then glycine (Gly) is proposed. The addition of Gly can exquisitely balance the attraction and repulsion energies for crystallization. The state transition induced by energy rather than temperature is significant for a biosystem.
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Affiliation(s)
- Yanqiu Du
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China. .,College of Materials and Textile Engineering, Jiaxing University, Jiaxing 314001, P. R. China
| | - Xiang Zhou
- Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, P. R. China
| | - Jing Jin
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China.
| | - Haojun Liang
- Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, P. R. China
| | - Yongfeng Men
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China.
| | - Wei Jiang
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China.
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16
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Abstract
Colloidal self-assembly refers to a solution-processed assembly of nanometer-/micrometer-sized, well-dispersed particles into secondary structures, whose collective properties are controlled by not only nanoparticle property but also the superstructure symmetry, orientation, phase, and dimension. This combination of characteristics makes colloidal superstructures highly susceptible to remote stimuli or local environmental changes, representing a prominent platform for developing stimuli-responsive materials and smart devices. Chemists are achieving even more delicate control over their active responses to various practical stimuli, setting the stage ready for fully exploiting the potential of this unique set of materials. This review addresses the assembly of colloids into stimuli-responsive or smart nanostructured materials. We first delineate the colloidal self-assembly driven by forces of different length scales. A set of concepts and equations are outlined for controlling the colloidal crystal growth, appreciating the importance of particle connectivity in creating responsive superstructures. We then present working mechanisms and practical strategies for engineering smart colloidal assemblies. The concepts underpinning separation and connectivity control are systematically introduced, allowing active tuning and precise prediction of the colloidal crystal properties in response to external stimuli. Various exciting applications of these unique materials are summarized with a specific focus on the structure-property correlation in smart materials and functional devices. We conclude this review with a summary of existing challenges in colloidal self-assembly of smart materials and provide a perspective on their further advances to the next generation.
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Affiliation(s)
- Zhiwei Li
- Department of Chemistry, University of California, Riverside, California 92521, United States
| | - Qingsong Fan
- Department of Chemistry, University of California, Riverside, California 92521, United States
| | - Yadong Yin
- Department of Chemistry, University of California, Riverside, California 92521, United States
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17
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Kim JM, Lee C, Lee Y, Lee J, Park SJ, Park S, Nam JM. Synthesis, Assembly, Optical Properties, and Sensing Applications of Plasmonic Gap Nanostructures. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2021; 33:e2006966. [PMID: 34013617 DOI: 10.1002/adma.202006966] [Citation(s) in RCA: 57] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 11/30/2020] [Indexed: 06/12/2023]
Abstract
Plasmonic gap nanostructures (PGNs) have been extensively investigated mainly because of their strongly enhanced optical responses, which stem from the high intensity of the localized field in the nanogap. The recently developed methods for the preparation of versatile nanogap structures open new avenues for the exploration of unprecedented optical properties and development of sensing applications relying on the amplification of various optical signals. However, the reproducible and controlled preparation of highly uniform plasmonic nanogaps and the prediction, understanding, and control of their optical properties, especially for nanogaps in the nanometer or sub-nanometer range, remain challenging. This is because subtle changes in the nanogap significantly affect the plasmonic response and are of paramount importance to the desired optical performance and further applications. Here, recent advances in the synthesis, assembly, and fabrication strategies, prediction and control of optical properties, and sensing applications of PGNs are discussed, and perspectives toward addressing these challenging issues and the future research directions are presented.
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Affiliation(s)
- Jae-Myoung Kim
- Department of Chemistry, Seoul National University, Seoul, 08826, South Korea
| | - Chungyeon Lee
- Department of Chemistry, Seoul National University, Seoul, 08826, South Korea
| | - Yeonhee Lee
- Department of Chemistry, Seoul National University, Seoul, 08826, South Korea
| | - Jinhaeng Lee
- Department of Chemistry, Sungkyunkwan University, Suwon, 16419, South Korea
| | - So-Jung Park
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul, 03760, South Korea
| | - Sungho Park
- Department of Chemistry, Sungkyunkwan University, Suwon, 16419, South Korea
| | - Jwa-Min Nam
- Department of Chemistry, Seoul National University, Seoul, 08826, South Korea
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18
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Encoding hierarchical assembly pathways of proteins with DNA. Proc Natl Acad Sci U S A 2021; 118:2106808118. [PMID: 34593642 DOI: 10.1073/pnas.2106808118] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/25/2021] [Indexed: 11/18/2022] Open
Abstract
The structural and functional diversity of materials in nature depends on the controlled assembly of discrete building blocks into complex architectures via specific, multistep, hierarchical assembly pathways. Achieving similar complexity in synthetic materials through hierarchical assembly is challenging due to difficulties with defining multiple recognition areas on synthetic building blocks and controlling the sequence through which those recognition sites direct assembly. Here, we show that we can exploit the chemical anisotropy of proteins and the programmability of DNA ligands to deliberately control the hierarchical assembly of protein-DNA materials. Through DNA sequence design, we introduce orthogonal DNA interactions with disparate interaction strengths ("strong" and "weak") onto specific geometric regions of a model protein, stable protein 1 (Sp1). We show that the spatial encoding of DNA ligands leads to highly directional assembly via strong interactions and that, by design, the first stage of assembly increases the multivalency of weak DNA-DNA interactions that give rise to an emergent second stage of assembly. Furthermore, we demonstrate that judicious DNA design not only directs assembly along a given pathway but can also direct distinct structural outcomes from a single pathway. This combination of protein surface and DNA sequence design allows us to encode the structural and chemical information necessary into building blocks to program their multistep hierarchical assembly. Our findings represent a strategy for controlling the hierarchical assembly of proteins to realize a diverse set of protein-DNA materials by design.
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19
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Wang S, Xie X, Chen Z, Ma N, Zhang X, Li K, Teng C, Ke Y, Tian Y. DNA-Grafted 3D Superlattice Self-Assembly. Int J Mol Sci 2021; 22:7558. [PMID: 34299179 PMCID: PMC8306452 DOI: 10.3390/ijms22147558] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 06/22/2021] [Accepted: 06/23/2021] [Indexed: 12/12/2022] Open
Abstract
The exploitation of new methods to control material structure has historically been dominating the material science. The bottom-up self-assembly strategy by taking atom/molecule/ensembles in nanoscale as building blocks and crystallization as a driving force bring hope for material fabrication. DNA-grafted nanoparticle has emerged as a "programmable atom equivalent" and was employed for the assembly of hierarchically ordered three-dimensional superlattice with novel properties and studying the unknown assembly mechanism due to its programmability and versatility in the binding capabilities. In this review, we highlight the assembly strategies and rules of DNA-grafted three-dimensional superlattice, dynamic assembly by different driving factors, and discuss their future applications.
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Affiliation(s)
- Shuang Wang
- Institute of Marine Biomedicine, Shenzhen Polytechnic, Shenzhen 518055, China; (S.W.); (K.L.)
- State Key Laboratory of Analytical Chemistry for Life Science, Nanjing University, Nanjing 210023, China; (X.X.); (Z.C.); (N.M.); (X.Z.)
| | - Xiaolin Xie
- State Key Laboratory of Analytical Chemistry for Life Science, Nanjing University, Nanjing 210023, China; (X.X.); (Z.C.); (N.M.); (X.Z.)
| | - Zhi Chen
- State Key Laboratory of Analytical Chemistry for Life Science, Nanjing University, Nanjing 210023, China; (X.X.); (Z.C.); (N.M.); (X.Z.)
| | - Ningning Ma
- State Key Laboratory of Analytical Chemistry for Life Science, Nanjing University, Nanjing 210023, China; (X.X.); (Z.C.); (N.M.); (X.Z.)
| | - Xue Zhang
- State Key Laboratory of Analytical Chemistry for Life Science, Nanjing University, Nanjing 210023, China; (X.X.); (Z.C.); (N.M.); (X.Z.)
| | - Kai Li
- Institute of Marine Biomedicine, Shenzhen Polytechnic, Shenzhen 518055, China; (S.W.); (K.L.)
- State Key Laboratory of Analytical Chemistry for Life Science, Nanjing University, Nanjing 210023, China; (X.X.); (Z.C.); (N.M.); (X.Z.)
| | - Chao Teng
- Institute of Marine Biomedicine, Shenzhen Polytechnic, Shenzhen 518055, China; (S.W.); (K.L.)
| | - Yonggang Ke
- Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30322, USA
| | - Ye Tian
- Shenzhen Research Institute of Nanjing University, Shenzhen 518000, China
- College of Engineering and Applied Sciences, Nanjing University, Nanjing 210023, China
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20
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Magriñá I, Ortiz M, Simonova A, Hocek M, O’ Sullivan CK, Forster RJ. Ferrocene-Containing DNA Monolayers: Influence of Electrostatics on the Electron Transfer Dynamics. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:3359-3369. [PMID: 33705153 PMCID: PMC8819689 DOI: 10.1021/acs.langmuir.0c03485] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 03/01/2021] [Indexed: 06/12/2023]
Abstract
A 153-mer target DNA was amplified using ethynyl ferrocene dATP and a tailed forward primer resulting in a duplex with a single-stranded DNA tail for hybridization to a surface-tethered probe. A thiolated probe containing the sequence complementary to the tail as well as a 15 polythimine vertical spacer with a (CH2)6 spacer was immobilized on the surface of a gold electrode and hybridized to the ferrocene-modified complementary strand. Potential step chronoamperometry and cyclic voltammetry were used to probe the potential of zero charge, PZC, and the rate of heterogeneous electron transfer between the electrode and the immobilized ferrocene moieties. Chronoamperometry gives three, well-resolved exponential current-time decays corresponding to ferrocene centers located within 13 Å (4 bases) along the duplex. Significantly, the apparent standard heterogeneous electron transfer rate constant, kappo, observed depends on the initial potential, i.e., the rate of electron transfer at zero driving force is not the same for oxidation and reduction of the ferrocene labels. Moreover, the presence of ions, such as Sr2+, that strongly ion pair with the negatively charged DNA backbone modulates the electron transfer rate significantly. Specifically, kappo = 246 ± 23.5 and 14 ± 1.2 s-1 for reduction and oxidation, respectively, where the Sr2+ concentration is 10 mM, but the corresponding values in 1 M Sr2+ are 8 ± 0.8 and 150 ± 12 s-1. While other factors may be involved, these results are consistent with a model in which a low Sr2+ concentration and an initial potential that is negative of the PZC lead to electrostatic repulsion of the negatively charged DNA backbone and the negatively charged electrode. This leads to the DNA adopting an extended configuration (concertina open), resulting in a slow rate of heterogeneous electron transfer. In contrast, for ferrocene reduction, the initial potential is positive of PZC and the negatively charged DNA is electrostatically attracted to the electrode (concertina closed), giving a shorter electron transfer distance and a higher rate of heterogeneous electron transfer. When the Sr2+ concentration is high, the charge on the DNA backbone is compensated by the electrolyte and the charge on the electrode dominates the electron transfer dynamics and the opposite potential dependence is observed. These results open up the possibility of electromechanical switching using DNA superstructures.
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Affiliation(s)
- Ivan Magriñá
- Departament
d’Enginyeria Química, Universitat
Rovira i Virgili, 26
Països Catalans, 43007 Tarragona, Spain
| | - Mayreli Ortiz
- Departament
d’Enginyeria Química, Universitat
Rovira i Virgili, 26
Països Catalans, 43007 Tarragona, Spain
| | - Anna Simonova
- Institute
of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Michal Hocek
- Institute
of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
- Department
of Organic Chemistry, Faculty of Science, Charles University in Prague, Hlavova 8, CZ-12843 Prague 2, Czech Republic
| | - Ciara K. O’ Sullivan
- Departament
d’Enginyeria Química, Universitat
Rovira i Virgili, 26
Països Catalans, 43007 Tarragona, Spain
- Institució
Catalana de Recerca i Estudis Avançats, Passeig Lluís Companys, 23, 08010 Barcelona, Spain
| | - Robert J. Forster
- School
of Chemical Sciences, FutureNeuro SFI Research Centre, National Centre
for Sensor Research, Dublin City University, Dublin D09 V209, Ireland
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21
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Kubiak JM, Morje AP, Lewis DJ, Wilson SL, Macfarlane RJ. Dynamic Manipulation of DNA-Programmed Crystals Embedded in a Polyelectrolyte Hydrogel. ACS APPLIED MATERIALS & INTERFACES 2021; 13:11215-11223. [PMID: 33645965 DOI: 10.1021/acsami.0c23097] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
DNA is a powerful tool for programming the three-dimensional organization of nanomaterials, where the specificity of nucleotide base-pairing can enable precise, complex, and dynamically addressable structures like colloidal crystals. However, because these DNA-programmed materials are often only stable in solution, their organization can be easily disrupted by changes to its local environment. Methods to stabilize these materials have been developed, but often come at the expense of altering or permanently fixing the materials' structures, removing many of the benefits of using DNA interactions to program assembly. Thus, these methods limit the application of DNA-assembled structures as dynamic and programmable material components. Here, a method is presented to resolve these drawbacks for DNA-grafted nanoparticles, also known as Programmable Atom Equivalents (PAEs), by embedding assembled lattices within a hydrogel matrix. The preformed lattices are exposed to polymerizable residues that electrostatically bind to the charged backbone of the DNA ligands and form a continuous, permeating gel network that stabilizes the colloidal crystals upon introduction of a radical initiator. After embedding PAEs in a hydrogel, deformation of the macroscopic matrix results in concomitant deformation of the PAE lattices, allowing superlattice structural changes to be induced by chemical methods (such as changing solute concentration to alter swelling pressure) or by application of mechanical strain. Changes to the structure of the PAE lattices are reversible and repeatable over multiple cycles and can be either isotropic (such as by swelling) or anisotropic (such as by mechanical deformation). This method of embedding nanoparticle crystals inside of a flexible and environmentally responsive hydrogel is therefore a useful tool in extending the utility of PAEs and other micro- and nanostructures assembled with DNA.
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Affiliation(s)
- Joshua M Kubiak
- Department of Materials Science and Engineering, Massachusetts Institute of Technology (MIT), 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Amogh P Morje
- Department of Materials Science and Engineering, Massachusetts Institute of Technology (MIT), 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Diana J Lewis
- Department of Materials Science and Engineering, Massachusetts Institute of Technology (MIT), 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
- The Charles Stark Draper Laboratory, Inc., 555 Technology Square, Cambridge, Massachusetts 02139, United States
| | - Sara L Wilson
- Department of Materials Science and Engineering, Massachusetts Institute of Technology (MIT), 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Robert J Macfarlane
- Department of Materials Science and Engineering, Massachusetts Institute of Technology (MIT), 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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22
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Li J, Shi H, Chen R, Wu X, Cheng J, Dong F, Wang H, He Y. Microfluidic synthesis of high-valence programmable atom-like nanoparticles for reliable sensing. Chem Sci 2020; 12:896-904. [PMID: 34163855 PMCID: PMC8179029 DOI: 10.1039/d0sc05911k] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Accepted: 11/30/2020] [Indexed: 12/03/2022] Open
Abstract
Synthesis of programmable atom-like nanoparticles (PANs) with high valences and high yields remains a grand challenge. Here, a novel synthetic strategy of microfluidic galvanic displacement (μ-GD) coupled with microfluidic DNA nanoassembly is advanced for synthesis of single-stranded DNA encoder (SSE)-encoded PANs for reliable surface-enhanced Raman scattering (SERS) sensing. Notably, PANs with high valences (e.g., n-valence, n = 12) are synthesized with high yields (e.g., >80%) owing to the effective control of interfacial reactions sequentially occurring in the microfluidic system. On the basis of this, we present the first demonstration of a PAN-based automatic analytical platform, in which sensor construction, sample loading and on-line monitoring are carried out in the microfluidic system, thus guaranteeing reliable quantitative measurement. In the proof-of-concept demonstration, accurate determination of tetracycline (TET) in serum and milk samples with a high recovery close to 100% and a low relative standard deviation (RSD) less than 5.0% is achieved by using this integrated analytical platform.
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Affiliation(s)
- Jing Li
- Laboratory of Nanoscale Biochemical Analysis, Institute of Functional Nano & Soft Materials (FUNSOM), Soochow University Suzhou 215123 China
| | - Huayi Shi
- Laboratory of Nanoscale Biochemical Analysis, Institute of Functional Nano & Soft Materials (FUNSOM), Soochow University Suzhou 215123 China
| | - Runzhi Chen
- Laboratory of Nanoscale Biochemical Analysis, Institute of Functional Nano & Soft Materials (FUNSOM), Soochow University Suzhou 215123 China
| | - Xiaofeng Wu
- Department of Ultrasound, The First Affiliated Hospital of Soochow University Suzhou 215006 China
| | - Jiayi Cheng
- Laboratory of Nanoscale Biochemical Analysis, Institute of Functional Nano & Soft Materials (FUNSOM), Soochow University Suzhou 215123 China
| | - Fenglin Dong
- Department of Ultrasound, The First Affiliated Hospital of Soochow University Suzhou 215006 China
| | - Houyu Wang
- Laboratory of Nanoscale Biochemical Analysis, Institute of Functional Nano & Soft Materials (FUNSOM), Soochow University Suzhou 215123 China
| | - Yao He
- Laboratory of Nanoscale Biochemical Analysis, Institute of Functional Nano & Soft Materials (FUNSOM), Soochow University Suzhou 215123 China
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