1
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Castanyer C, Çelik Ç, Artigas A, Roglans A, Pla-Quintana A, Stasyuk AJ, Yamakoshi Y, Solà M. Enhancement of photoinduced reactive oxygen species generation in open-cage fullerenes. Chem Sci 2025; 16:2673-2681. [PMID: 39802695 PMCID: PMC11713577 DOI: 10.1039/d4sc05428h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Accepted: 12/12/2024] [Indexed: 01/16/2025] Open
Abstract
Photodynamic therapy is an important tool in modern medicine due to its effectiveness, safety, and the ability to provide targeted treatment for a range of diseases. Photodynamic therapy utilizes photosensitizers to generate reactive oxygen species (ROS). Fullerenes can be used as photosensitizers to produce ROS in high quantum yields. Open-cage fullerenes are a subclass of fullerenes characterized by a partially open structure, with one or more openings or apertures. The promising electrochemical properties of open-cage fullerenes motivated us to investigate their use for DNA-cleavage and ROS generation under visible light irradiation through type I electron transfer and type II energy transfer reactions. Our results show that open-cage C60 fullerenes are more efficient for photoinduced cleavage of DNA and ROS generation via both the type I electron transfer and type II energy transfer pathways than pristine C60 or a C60 pyrrolidine derivative without open-cage. The greater efficiency of ROS generation by open-cage C60 fullerene in type I and type II reactions can be attributed to the increased rate of the initial intersystem crossing process, resulting from larger total reorganization energies, as indicated by computationally calculated relative rates using the Marcus equation, and the lower reduction potential of the open-cage derivative 3, as determined by CV, which facilitates a more efficient generation of the corresponding radical anion (C60˙-).
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Affiliation(s)
- Cristina Castanyer
- Institut de Quimica Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona M. Aurèlia Capmany, 69 17003 Girona Catalonia Spain
| | - Çetin Çelik
- Department of Chemistry and Applied Biosciences, ETH Zürich Vladimir-Prelog-Weg 3 CH-8093 Zürich Switzerland
| | - Albert Artigas
- Institut de Quimica Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona M. Aurèlia Capmany, 69 17003 Girona Catalonia Spain
| | - Anna Roglans
- Institut de Quimica Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona M. Aurèlia Capmany, 69 17003 Girona Catalonia Spain
| | - Anna Pla-Quintana
- Institut de Quimica Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona M. Aurèlia Capmany, 69 17003 Girona Catalonia Spain
| | - Anton J Stasyuk
- Institut de Quimica Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona M. Aurèlia Capmany, 69 17003 Girona Catalonia Spain
- Faculty of Chemistry, University of Warsaw Pasteura 1 02-093 Warsaw Poland
- Departament de Farmàcia i Tecnologia Farmacèutica, i Fisicoquímica, Facultat de Farmàcia i Ciències de l'Alimentació & Institut de Química Teòrica i Computacional (IQTCUB), Universitat de Barcelona (UB) Av. Joan XXIII 27-31 Barcelona Catalonia Spain
| | - Yoko Yamakoshi
- Department of Chemistry and Applied Biosciences, ETH Zürich Vladimir-Prelog-Weg 3 CH-8093 Zürich Switzerland
| | - Miquel Solà
- Institut de Quimica Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona M. Aurèlia Capmany, 69 17003 Girona Catalonia Spain
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2
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Takagi H, Çelik Ç, Fukuda R, Guo Q, Higashino T, Imahori H, Yamakoshi Y, Murakami T. Interaction of a pyrene derivative with cationic [60]fullerene in phospholipid membranes and its effects on photodynamic actions. Beilstein J Org Chem 2024; 20:2732-2738. [PMID: 39498446 PMCID: PMC11533121 DOI: 10.3762/bjoc.20.231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Accepted: 10/01/2024] [Indexed: 11/07/2024] Open
Abstract
We have reported that upon visible light irradiation, ferrocene-porphyrin-[60]fullerene triad molecules yield long-lived charge-separated states, enabling the control of the plasma membrane potential (V m) in living cells. These previous studies indicated that the localization of the triad molecules in a specific intra-membrane orientation and the suppression of the photodynamic actions of the [60]fullerene (C60) moiety are likely important to achieve fast and safe control of V m, respectively. In this study, by mimicking our previous system of triad molecules and living cells, we report a simplified model system with a cationic C60 derivative (catC60) and a liposome with embedded 1-pyrenebutyric acid (PyBA) to demonstrate that the addition of PyBA was important to achieve fast and safer control of V m.
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Affiliation(s)
- Hayato Takagi
- Department of Biotechnology and Pharmaceutical Engineering, Graduate School of Engineering, Toyama Prefectural University, 5180 Kurokawa, Imizu City, Toyama 939-0398, Japan
| | - Çetin Çelik
- Laboratorium für Anorganische Chemie, ETH Zürich, CH-8093 Zürich, Switzerland
| | - Ryosuke Fukuda
- Department of Biotechnology and Pharmaceutical Engineering, Graduate School of Engineering, Toyama Prefectural University, 5180 Kurokawa, Imizu City, Toyama 939-0398, Japan
| | - Qi Guo
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Tomohiro Higashino
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Hiroshi Imahori
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Nishikyo-ku, Kyoto 615-8510, Japan
- Instutite for Integrated Cell–Material Sciences (iCeMS), Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
- Instutite for Liberal Arts and Sciences (ILAS), Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Yoko Yamakoshi
- Laboratorium für Anorganische Chemie, ETH Zürich, CH-8093 Zürich, Switzerland
| | - Tatsuya Murakami
- Department of Biotechnology and Pharmaceutical Engineering, Graduate School of Engineering, Toyama Prefectural University, 5180 Kurokawa, Imizu City, Toyama 939-0398, Japan
- Instutite for Integrated Cell–Material Sciences (iCeMS), Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
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3
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Sengupta D, Sharma D, Das RK, Das P, Halder M, Rai P, Chakrabarti O. Pioneering the Photoactive Relevance of Quinazolinone-Fullereropyrrolidine Nanohybrids To Address Chemotherapeutic Resistance in Cancer. ACS Med Chem Lett 2024; 15:1118-1126. [PMID: 39015282 PMCID: PMC11247657 DOI: 10.1021/acsmedchemlett.4c00187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2024] [Revised: 06/16/2024] [Accepted: 06/20/2024] [Indexed: 07/18/2024] Open
Abstract
This study investigates the impact of C70 and C60 fullerenes on quinazolinone, specifically in quinazolinone-fulleropyrrolidine nanohybrids. The nanohybrids Q 3 C 70 M and Q 3 C 60 M exhibit distinct spectral shifts and have significant photobiological antineoplastic properties. Q 3 C 60 M enhances apoptosis, while Q 3 C 70 M reduces Cyclin A levels and counteracts oncogenic effects by promoting cell differentiation. Q 3 C 70 M demonstrates heightened cytotoxicity by overcoming chemotherapy resistance by modulating BAX and BCL-2 levels. This innovative approach, distinguishing between C70 and C60, represents a novel contribution to the existing scientific literature.
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Affiliation(s)
| | - Debdulal Sharma
- Department
of Chemistry, Assam University, Silchar-788011, Assam, India
| | - Ranjan Kumar Das
- Department
of Chemistry, Assam University, Silchar-788011, Assam, India
| | - Prem Das
- Biophysics
and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata-700064, West Bengal, India
| | - Madhumanti Halder
- Biophysics
and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata-700064, West Bengal, India
| | - Pushkar Rai
- Department
of Chemistry, Assam University, Silchar-788011, Assam, India
| | - Oishee Chakrabarti
- Biophysics
and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata-700064, West Bengal, India
- Homi
Bhabha National Institute, Mumbai-400094, Maharashtra, India
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4
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Ma Y, Persi L, Yamakoshi Y. Synthesis and characterization of water-soluble C 60-peptide conjugates. Beilstein J Org Chem 2024; 20:777-786. [PMID: 38633915 PMCID: PMC11022410 DOI: 10.3762/bjoc.20.71] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 03/27/2024] [Indexed: 04/19/2024] Open
Abstract
With the aim of developing biocompatible and water-soluble C60 derivatives, three types of C60-peptide conjugates consisting of hydrophilic oligopeptide anchors (oligo-Lys, oligo-Glu, and oligo-Arg) were synthesized. A previously reported Prato reaction adduct of a biscarboxylic acid-substituted C60 derivative was subjected to a solid phase synthesis for amide formation with N-terminal amines of peptides on resin to successfully provide C60-peptide conjugates with one C60 and two peptide anchors as water-soluble moieties. Among three C60-peptide conjugates prepared, C60-oligo-Lys was soluble in water at neutral pH, and C60-oligo-Glu was soluble in buffer with a higher pH value, but C60-oligo-Arg was insoluble in water and most other solvents. C60-oligo-Lys and C60-oligo-Glu were characterized by 1H and 13C NMR. Photoinduced 1O2 generation was observed in the most soluble C60-oligo-Lys conjugate under visible light irradiation (527 nm) to show the potential of this highly water-soluble molecule in biological systems, for example, as a photosensitizer in photodynamic therapy.
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Affiliation(s)
- Yue Ma
- Department of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg 3, 8093 Zürich, Switzerland
| | - Lorenzo Persi
- Department of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg 3, 8093 Zürich, Switzerland
| | - Yoko Yamakoshi
- Department of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg 3, 8093 Zürich, Switzerland
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5
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Biswas R, Batista Da Rocha C, Bennick RA, Zhang J. Water-Soluble Fullerene Monoderivatives for Biomedical Applications. ChemMedChem 2023; 18:e202300296. [PMID: 37728195 DOI: 10.1002/cmdc.202300296] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 08/30/2023] [Indexed: 09/21/2023]
Abstract
Monoderivatives of fullerenes functionalized with hydrophilic groups make them water soluble, while preserving the hydrophobic fullerene cage. This class of molecules have intriguing biomedical applications, including drug delivery, photodynamic therapy (PDT), antiviral and antimicrobial activity and reactive oxygen species (ROS)-scavenging abilities. In this Concept we discuss the synthesis and biomedical applications of water-soluble fullerene monoderivatives and their biological behavior based on their structures.
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Affiliation(s)
- Rohin Biswas
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, NJ 08854, USA
| | - Cassiana Batista Da Rocha
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, NJ 08854, USA
| | - Ryan A Bennick
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, NJ 08854, USA
| | - Jianyuan Zhang
- Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 123 Bevier Road, Piscataway, NJ 08854, USA
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6
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Nemeth T, Yoshizawa-Sugata N, Pallier A, Tajima Y, Ma Y, Tóth É, Masai H, Yamakoshi Y. Water-Soluble Gd(III)-Porphyrin Complexes Capable of Both Photosensitization and Relaxation Enhancement. CHEMICAL & BIOMEDICAL IMAGING 2023; 1:157-167. [PMID: 37235189 PMCID: PMC10207321 DOI: 10.1021/cbmi.3c00007] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 04/26/2023] [Accepted: 04/28/2023] [Indexed: 05/28/2023]
Abstract
With the aim of developing more stable Gd(III)-porphyrin complexes, two types of ligands 1 and 2 with carboxylic acid anchors were synthesized. Due to the N-substituted pyridyl cation attached to the porphyrin core, these porphyrin ligands were highly water-soluble and formed the corresponding Gd(III) chelates, Gd-1 and Gd-2. Gd-1 was sufficiently stable in neutral buffer, presumably due to the preferred conformation of the carboxylate-terminated anchors connected to nitrogen in the meta position of the pyridyl group helping to stabilize Gd(III) complexation by the porphyrin center. 1H NMRD (nuclear magnetic relaxation dispersion) measurements on Gd-1 revealed high longitudinal water proton relaxivity (r1 = 21.2 mM-1 s-1 at 60 MHz and 25 °C), which originates from slow rotational motion resulting from aggregation in aqueous solution. Under visible light irradiation, Gd-1 showed extensive photoinduced DNA cleavage in line with efficient photoinduced singlet oxygen generation. Cell-based assays revealed no significant dark cytotoxicity of Gd-1, while it showed sufficient photocytotoxicity on cancer cell lines under visible light irradiation. These results indicate the potential of this Gd(III)-porphyrin complex (Gd-1) as a core for the development of bifunctional systems acting as an efficient photodynamic therapy photosensitizer (PDT-PS) with magnetic resonance imaging (MRI) detection capabilities.
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Affiliation(s)
- Tamas Nemeth
- Department
of Chemistry and Applied Biosciences, ETH
Zürich, Vladimir-Prelog-Weg 3, CH8093 Zürich, Switzerland
| | - Naoko Yoshizawa-Sugata
- Research
Center for Genome & Medical Sciences, Tokyo Metropolitan Institute of Medical Science, 2-1-6 Kamikitazawa, Setagaya, Tokyo 156-8506, Japan
| | - Agnes Pallier
- Centre
de Biophysique Moléculaire, CNRS UPR 4301, University of Orléans, Rue Charles Sadron, 45071 Cedex 2 Orléans, France
| | - Youichi Tajima
- Department
of Basic Medical Sciences, Tokyo Metropolitan
Institute of Medical Science, 2-1-6 Kamikitazawa, Setagaya, Tokyo 156-8506, Japan
| | - Yue Ma
- Department
of Chemistry and Applied Biosciences, ETH
Zürich, Vladimir-Prelog-Weg 3, CH8093 Zürich, Switzerland
| | - Éva Tóth
- Centre
de Biophysique Moléculaire, CNRS UPR 4301, University of Orléans, Rue Charles Sadron, 45071 Cedex 2 Orléans, France
| | - Hisao Masai
- Department
of Basic Medical Sciences, Tokyo Metropolitan
Institute of Medical Science, 2-1-6 Kamikitazawa, Setagaya, Tokyo 156-8506, Japan
| | - Yoko Yamakoshi
- Department
of Chemistry and Applied Biosciences, ETH
Zürich, Vladimir-Prelog-Weg 3, CH8093 Zürich, Switzerland
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7
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Li Y, Biswas R, Kopcha WP, Dubroca T, Abella L, Sun Y, Crichton RA, Rathnam C, Yang L, Yeh Y, Kundu K, Rodríguez‐Fortea A, Poblet JM, Lee K, Hill S, Zhang J. Structurally Defined Water-Soluble Metallofullerene Derivatives towards Biomedical Applications. Angew Chem Int Ed Engl 2023; 62:e202211704. [PMID: 36349405 PMCID: PMC9983306 DOI: 10.1002/anie.202211704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Indexed: 11/11/2022]
Abstract
Endohedral metallofullerenes (EMFs) are excellent carriers of rare-earth element (REE) ions in biomedical applications because they preclude the release of toxic metal ions. However, existing approaches to synthesize water-soluble EMF derivatives yield mixtures that inhibit precise drug design. Here we report the synthesis of metallobuckytrio (MBT), a three-buckyball system, as a modular platform to develop structurally defined water-soluble EMF derivatives with ligands by choice. Demonstrated with PEG ligands, the resulting water-soluble MBTs show superb biocompatibility. The Gd MBTs exhibit superior T1 relaxivity than typical Gd complexes, potentially superseding current clinical MRI contrast agents in both safety and efficiency. The Lu MBTs generated reactive oxygen species upon light irradiation, showing promise as photosensitizers. With their modular nature to incorporate other ligands, we anticipate the MBT platform to open new paths towards bio-specific REE drugs.
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Affiliation(s)
- Yanbang Li
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Rohin Biswas
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - William P. Kopcha
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Thierry Dubroca
- National High Magnetic Field Laboratory (NHMFL)Florida State University1800 E. Paul Dirac Dr.TallahasseeFL 32310USA
| | - Laura Abella
- Departament de Química Física i InorgànicaUniversitat Rovira i VirgiliMarcel⋅lí Domingo 143007TarragonaSpain
| | - Yue Sun
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Ryan A. Crichton
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Christopher Rathnam
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Letao Yang
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Yao‐Wen Yeh
- Department of Physics and Astronomy, RutgersThe State University of New Jersey136 Frelinghuysen RdPiscatawayNJ 08854USA
| | - Krishnendu Kundu
- National High Magnetic Field Laboratory (NHMFL)Florida State University1800 E. Paul Dirac Dr.TallahasseeFL 32310USA
| | - Antonio Rodríguez‐Fortea
- Departament de Química Física i InorgànicaUniversitat Rovira i VirgiliMarcel⋅lí Domingo 143007TarragonaSpain
| | - Josep M. Poblet
- Departament de Química Física i InorgànicaUniversitat Rovira i VirgiliMarcel⋅lí Domingo 143007TarragonaSpain
| | - Ki‐Bum Lee
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
| | - Stephen Hill
- National High Magnetic Field Laboratory (NHMFL)Florida State University1800 E. Paul Dirac Dr.TallahasseeFL 32310USA
- Department of PhysicsFlorida State UniversityTallahasseeFL 32306USA
| | - Jianyuan Zhang
- Department of Chemistry and Chemical Biology, RutgersThe State University of New Jersey123 Bevier RdPiscatawayNJ 08854USA
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8
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Tan Y, Ma Y, Zhao C, Huang Z, Zhang A. Hybrid Nanoparticles of Tetraamino Fullerene and Benzothiadiazole fluorophore as Efficient Photosensitizers against Multidrug-Resistant Bacteria. J Photochem Photobiol A Chem 2023. [DOI: 10.1016/j.jphotochem.2023.114537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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9
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Tan Y, Ma Y, Fu S, Zhang A. Facile construction of fluorescent C 70-COOH nanoparticles with advanced antibacterial and anti-biofilm photodynamic activity. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY. B, BIOLOGY 2022; 234:112507. [PMID: 35810597 DOI: 10.1016/j.jphotobiol.2022.112507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Revised: 05/06/2022] [Accepted: 06/25/2022] [Indexed: 06/15/2023]
Abstract
Photodynamic antibacterial therapy has been considered as one of the most promising treatments to alleviate the spread of multidrug resistant bacterial pathogens. Given the hypoxic environment of infectious tissues, photosensitizers with reduced oxygen-demand could exhibit superiority upon irradiation. Herein reported is a novel C70-based photosensitizers synthesized by the facile one-step thiol-ene reaction. Various characterization techniques were employed to confirm the structural, photoluminescent properties, photostability and biocompatibility of the as-synthesized C70-COOH nanoparticles. Furthermore, they were capable of efficiently producing reactive oxygen species following both the type I and II mechanistic pathways, thus still generating adequate free radicals under hypoxic condition. Therefore, they could approach and destroy the bacterial cell membrane in the presence of visible light, thereby causing cytoplasmic leakage and eventually achieving broad-spectrum inactivation of four representative bacterial strains. Especially, methicillin-resistant Staphylococcus aureus (MRSA) were completely eliminated after merely 10 minutes irradiation, and the formation of its corresponding biofilm were also greatly inhibited by C70-COOH nanoparticles. These results provide new insights and opportunities for the development of hypoxia-tolerant fullerene-based photosensitizers to combat multidrug resistant bacterial and related infections.
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Affiliation(s)
- Yixuan Tan
- Key Laboratory of Analytical Chemistry of the State Ethnic Affairs Commission, South-Central University for Nationalities, Wuhan 430074, China
| | - Yihan Ma
- Key Laboratory of Analytical Chemistry of the State Ethnic Affairs Commission, South-Central University for Nationalities, Wuhan 430074, China.
| | - Sheng Fu
- Key Laboratory of Analytical Chemistry of the State Ethnic Affairs Commission, South-Central University for Nationalities, Wuhan 430074, China
| | - Aiqing Zhang
- Key Laboratory of Analytical Chemistry of the State Ethnic Affairs Commission, South-Central University for Nationalities, Wuhan 430074, China.
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10
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Ray A, Passiu C, Nasuda M, Ramakrishna SN, Rossi A, Kuzuya A, Spencer ND, Yamakoshi Y. Reactive-Oxygen-Species-Mediated Surface Oxidation of Single-Molecule DNA Origami by an Atomic Force Microscope Tip-Mounted C 60 Photocatalyst. ACS NANO 2021; 15:19256-19265. [PMID: 34817171 DOI: 10.1021/acsnano.1c04953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
A tripod molecule incorporating a C60 photocatalyst into a rigid scaffold with disulfide legs was designed and synthesized for the stable and robust attachment of C60 onto an Au-coated atomic force microscope (AFM) tip. The "tripod-C60" was immobilized onto the tip by forming S-Au bonds in the desired orientation and a dispersed manner, rendering it suitable for the oxidation and scission of single molecules on a countersurface, thereby functioning as "molecular shears". A DNA origami with a well-defined structure was chosen as the substrate for the tip-induced oxidation. The gold-coated, C60-functionalized AFM tip was used for both AFM imaging and oxidation of DNA origami upon visible-light irradiation. The localized and temporally controlled oxidative damage of DNA origami was successfully performed at the single-molecule level via singlet-oxygen (1O2) generation from the immobilized C60 on the AFM tip. This oxidative damage to DNA origami can be carried out under ambient conditions in a fluid cell at room temperature, rendering it well-suited for the manipulation of a variety of species on surfaces via a spatially and temporally controlled oxidation reaction triggered by 1O2 locally generated from the immobilized C60 on the AFM tip.
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Affiliation(s)
- Ankita Ray
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir-Prelog-Weg 3, CH 8093 Zürich, Switzerland
| | - Cristiana Passiu
- Laboratory for Surface Science and Technology, Department of Materials, ETH Zürich, Vladimir-Prelog-Weg 5, CH 8093 Zürich, Switzerland
| | - Masayuki Nasuda
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir-Prelog-Weg 3, CH 8093 Zürich, Switzerland
| | - Shivaprakash N Ramakrishna
- Laboratory for Surface Science and Technology, Department of Materials, ETH Zürich, Vladimir-Prelog-Weg 5, CH 8093 Zürich, Switzerland
| | - Antonella Rossi
- Laboratory for Surface Science and Technology, Department of Materials, ETH Zürich, Vladimir-Prelog-Weg 5, CH 8093 Zürich, Switzerland
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, Cittadella Universitaria di Monserrato, I-09100 Cagliari, Italy
| | - Akinori Kuzuya
- Department of Chemistry and Materials Engineering, Kansai University, Yamate-cho 3-3-35, Suita, 564-8680 Osaka, Japan
| | - Nicholas D Spencer
- Laboratory for Surface Science and Technology, Department of Materials, ETH Zürich, Vladimir-Prelog-Weg 5, CH 8093 Zürich, Switzerland
| | - Yoko Yamakoshi
- Laboratorium für Organische Chemie, ETH Zürich, Vladimir-Prelog-Weg 3, CH 8093 Zürich, Switzerland
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