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Dubovik V, Dalinova A, Berestetskiy A. Natural ten-membered lactones: sources, structural diversity, biological activity, and intriguing future. Nat Prod Rep 2024; 41:85-112. [PMID: 37885339 DOI: 10.1039/d3np00013c] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2023]
Abstract
Covering: 2012 to 2022Ten-membered lactones (TMLs) are an interesting and diverse group of natural polyketides that are abundant in fungi and, to a lesser extent, in bacteria, marine organisms, and insects. TMLs are known for their ability to exhibit a wide spectrum of biological activity, including phytotoxic, cytotoxic, antifungal, antibacterial, and others. However, the random discovery of these compounds by scientific groups with various interests worldwide has resulted in patchy information about their distribution among different organisms and their biological activity. Therefore, despite more than 60 years of research history, there is still no common understanding of the natural sources of TMLs, their structural type classification, and most characteristic biological activities. The controversial nomenclature, incorrect or erroneous structure elucidation, poor identification of producing organisms, and scattered information on the biological activity of compounds - all these factors have led to the problems with dereplication and the directed search for TMLs. This review consists of two parts: the first part (Section 2) covers 104 natural TMLs, published between 2012 and 2022 (after the publishing of the previous review), and the second part (Section 3) summarizes information about 214 TMLs described during 1964-2022 and as a result highlights the main problems and trends in the study of these intriguing natural products.
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Affiliation(s)
- Vsevolod Dubovik
- Laboratory of Phytotoxicology and Biotechnology, All-Russian Institute of Plant Protection, Pushkin, 196608 Saint-Petersburg, Russia.
| | - Anna Dalinova
- Laboratory of Phytotoxicology and Biotechnology, All-Russian Institute of Plant Protection, Pushkin, 196608 Saint-Petersburg, Russia.
| | - Alexander Berestetskiy
- Laboratory of Phytotoxicology and Biotechnology, All-Russian Institute of Plant Protection, Pushkin, 196608 Saint-Petersburg, Russia.
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Salim AA, Butler MS, Blaskovich MAT, Henderson IR, Capon RJ. Natural products as anthelmintics: safeguarding animal health. Nat Prod Rep 2023; 40:1754-1808. [PMID: 37555325 DOI: 10.1039/d3np00019b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/10/2023]
Abstract
Covering literature to December 2022This review provides a comprehensive account of all natural products (500 compounds, including 17 semi-synthetic derivatives) described in the primary literature up to December 2022, reported to be capable of inhibiting the egg hatching, motility, larval development and/or the survival of helminths (i.e., nematodes, flukes and tapeworms). These parasitic worms infect and compromise the health and welfare, productivity and lives of commercial livestock (i.e., sheep, cattle, horses, pigs, poultry and fish), companion animals (i.e., dogs and cats) and other high value, endangered and/or exotic animals. Attention is given to chemical structures, as well as source organisms and anthelmintic properties, including the nature of bioassay target species, in vivo animal hosts, and measures of potency.
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Affiliation(s)
- Angela A Salim
- Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, 4072.
| | - Mark S Butler
- Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, 4072.
| | - Mark A T Blaskovich
- Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, 4072.
| | - Ian R Henderson
- Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, 4072.
| | - Robert J Capon
- Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, 4072.
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Abstract
Covering: 2000 to 2022Natural products are a vital source of compounds for use in agriculture, medicine, cosmetics, and other fields. Macrolides are a wide group of natural products found in plants and microorganisms. They are a group of polyketides constituted of different-sized rings and characterized by the presence of a lactone group. These compounds show different biological activities, such as antiviral, antiparasitic, antifungal, antibacterial, immunosuppressive, herbicidal, and cytotoxic activities. This review is focused on macrolides isolated from fungal sources, examining their biological activities, stereochemistry, and structure-activity relationships. The review reports the chemical and biological characterization of fungal macrolides isolated in the last four decades, with assistance from SciFinder searches. A critical evaluation of the most recent reviews covering this area is also provided. The content provided in this review is of interest to chemists focusing on natural substances, plant pathologists and physiologists, botanists, mycologists, biologists, and pharmacologists. Furthermore, it is of interest to farmers and agri-food specialists and those working in the medicinal and cosmetic industries due to the potential practical application of macrolides. Politicians could also be interested in this class of natural compound, as the practical application of these macrolides in the above-cited fields could reduce environmental pollution and increase consumer satisfaction with respect to food, providing reduced or zero risk to human and animal health along with increased nutraceutical value.
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Affiliation(s)
- Antonio Evidente
- Department of Chemical Sciense, University of Naples Federico II, Complesso Universitario Monte S. Angelo, Via Cintia 4, 80126, Naples, Italy.
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Chang C, Geng J, Du Y, Lv Q, Dong Z, Liu J. Divergent total synthesis of aspinolides B, E and J. Tetrahedron 2019. [DOI: 10.1016/j.tet.2019.06.015] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Kim W, Peever TL, Park JJ, Park CM, Gang DR, Xian M, Davidson JA, Infantino A, Kaiser WJ, Chen W. Use of metabolomics for the chemotaxonomy of legume-associated Ascochyta and allied genera. Sci Rep 2016; 6:20192. [PMID: 26847260 PMCID: PMC4742866 DOI: 10.1038/srep20192] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2015] [Accepted: 12/23/2015] [Indexed: 01/28/2023] Open
Abstract
Chemotaxonomy and the comparative analysis of metabolic features of fungi have the potential to provide valuable information relating to ecology and evolution, but have not been fully explored in fungal biology. Here, we investigated the chemical diversity of legume-associated Ascochyta and Phoma species and the possible use of a metabolomics approach using liquid chromatography-mass spectrometry for their classification. The metabolic features of 45 strains including 11 known species isolated from various legumes were extracted, and the datasets were analyzed using chemometrics methods such as principal component and hierarchical clustering analyses. We found a high degree of intra-species consistency in metabolic profiles, but inter-species diversity was high. Molecular phylogenies of the legume-associated Ascochyta/Phoma species were estimated using sequence data from three protein-coding genes and the five major chemical groups that were detected in the hierarchical clustering analysis were mapped to the phylogeny. Clusters based on similarity of metabolic features were largely congruent with the species phylogeny. These results indicated that evolutionarily distinct fungal lineages have diversified their metabolic capacities as they have evolved independently. This whole metabolomics approach may be an effective tool for chemotaxonomy of fungal taxa lacking information on their metabolic content.
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Affiliation(s)
- Wonyong Kim
- Department of Plant Pathology, Washington State University, Pullman, WA 99164, USA
| | - Tobin L. Peever
- Department of Plant Pathology, Washington State University, Pullman, WA 99164, USA
| | - Jeong-Jin Park
- Institute of Biological Chemistry, Washington State University, Pullman, WA 99164, USA
| | - Chung-Min Park
- Department of Chemistry, Washington State University, Pullman, WA 99164, USA
| | - David R. Gang
- Institute of Biological Chemistry, Washington State University, Pullman, WA 99164, USA
| | - Ming Xian
- Department of Chemistry, Washington State University, Pullman, WA 99164, USA
| | - Jenny A. Davidson
- South Australian Research and Development Institute, Adelaide, South Australia 5001, Australia
| | - Alessandro Infantino
- Consiglio per la Ricerca in Agricoltura e l’analisi dell’economia agraria (CREA), Centro di Ricerca per la Patologia Vegetale, Rome, 00156, Italy
| | - Walter J. Kaiser
- USDA-ARS Western Regional Plant Introduction Station, Washington State University, Pullman, WA 99164, USA
| | - Weidong Chen
- Department of Plant Pathology, Washington State University, Pullman, WA 99164, USA
- USDA-ARS Grain Legume Genetics and Physiology Research Unit, Washington State University, Pullman, WA 99164, USA
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Deshmukh SC, Talukdar P. Stereoselective Synthesis of (2S,3R)-α-Hydroxy-β-Amino Acids (AHBAs): Valinoctin A, (2S,3R)-3-Amino-2-Hydroxydecanoic Acid, and a Fluorescent-Labeled (2S,3R)-AHBA. J Org Chem 2014; 79:11215-25. [DOI: 10.1021/jo501751u] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
| | - Pinaki Talukdar
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Pune, 411008 India
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Cimmino A, Andolfi A, Fondevilla S, Abouzeid MA, Rubiales D, Evidente A. Pinolide, a new nonenolide produced by Didymella pinodes , the causal agent of ascochyta blight on Pisum sativum. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2012; 60:5273-8. [PMID: 22568524 DOI: 10.1021/jf300824d] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
An aggressive isolate of Didymella pinodes isolated from pea ( Pisum sativum ) produced four different metabolites in vitro. The metabolites isolated from the culture filtrates were characterized by spectroscopic and optical methods. A new nonenolide, named pinolide, was isolated and characterized as (2S*,7R*,8S*,5E,9R*)-2,7,8-trihydroxy-9-propyl-5-nonen-9-olide. Pinolidoxin, the main toxin produced by D. pinodes, was also isolated together with two other closely related nonenolides, identified as herbarumin II and 2-epi-herbarumin II. Herbarumin II and 2-epi-herbarumin II have been previously isolated from the fungi Phoma herbarum and Paraphaeosphaeria recurvifoliae , respectively, but described here to be isolated for the first time from D. pinodes. When tested on leaves of the host plant and other legumes and weeds, pinolidoxin was phytotoxic in all of the plant species, whereas the other three nonenolides did not produce any symptoms. The importance of the stereochemistry of the hydroxy group at C-7 on phytotoxicity also is discussed.
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Affiliation(s)
- Alessio Cimmino
- Dipartimento di Scienze del Suolo, della Pianta, dell'Ambiente e delle Produzioni Animali, Università di Napoli Federico II, Via Università 100, 80055 Portici, Italy
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Goswami D, Chattopadhyay A. Formal and total syntheses of herbarumin I and II, respectively from (R)-2,3-cyclohexylideneglyceraldehyde. ACTA ACUST UNITED AC 2012. [DOI: 10.1016/j.tetasy.2012.05.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Radha Krishna P, Ramana DV. Titanium(IV)-Promoted Regioselective Nucleophilic Ring-Opening Reaction of Chiral Epoxyallyl Alcohols with Acids as a Tool for Ready Access to Chiral 1,2,3-Triol Monoesters: Application to Stereoselective Total Synthesis of Macrolides. J Org Chem 2011; 77:674-9. [DOI: 10.1021/jo202199g] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Palakodety Radha Krishna
- D-211, Discovery Laboratory, Organic & Biomolecular Chemistry Division, CSIR-Indian Institute of Chemical Technology, Hyderabad 500607, India
| | - D. Venkata Ramana
- D-211, Discovery Laboratory, Organic & Biomolecular Chemistry Division, CSIR-Indian Institute of Chemical Technology, Hyderabad 500607, India
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Prasad KR, Penchalaiah K. Enantiodivergent total synthesis of microcarpalide from l-tartaric acid. Tetrahedron 2011. [DOI: 10.1016/j.tet.2011.03.102] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Angulo-Pachón CA, Díaz-Oltra S, Murga J, Carda M, Marco JA. Stereoselective Synthesis and Structural Correction of the Naturally Occurring Lactone Stagonolide G. Org Lett 2010; 12:5752-5. [DOI: 10.1021/ol102599e] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- César A. Angulo-Pachón
- Departamento de Química Inorgánica y Orgánica, Universitat Jaume I, Castellón, E-12080 Castellón, Spain, and Departamento de Química Orgánica, Universitat de Valencia, E-46100 Burjassot, Valencia, Spain
| | - Santiago Díaz-Oltra
- Departamento de Química Inorgánica y Orgánica, Universitat Jaume I, Castellón, E-12080 Castellón, Spain, and Departamento de Química Orgánica, Universitat de Valencia, E-46100 Burjassot, Valencia, Spain
| | - Juan Murga
- Departamento de Química Inorgánica y Orgánica, Universitat Jaume I, Castellón, E-12080 Castellón, Spain, and Departamento de Química Orgánica, Universitat de Valencia, E-46100 Burjassot, Valencia, Spain
| | - Miguel Carda
- Departamento de Química Inorgánica y Orgánica, Universitat Jaume I, Castellón, E-12080 Castellón, Spain, and Departamento de Química Orgánica, Universitat de Valencia, E-46100 Burjassot, Valencia, Spain
| | - J. Alberto Marco
- Departamento de Química Inorgánica y Orgánica, Universitat Jaume I, Castellón, E-12080 Castellón, Spain, and Departamento de Química Orgánica, Universitat de Valencia, E-46100 Burjassot, Valencia, Spain
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Yin B, Ye DN, Yu KH, Liu LX. A general and simple diastereoselective reduction by L-Selectride: efficient synthesis of protected (4S,5S)-dihydroxy amides. Molecules 2010; 15:2771-81. [PMID: 20428078 PMCID: PMC6257261 DOI: 10.3390/molecules15042771] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2009] [Revised: 03/24/2010] [Accepted: 04/12/2010] [Indexed: 11/30/2022] Open
Abstract
A general approach to (4S,5S)-4-benzyloxy-5-hydroxy-N-(4-methoxybenzyl) amides 10 based on a diastereoselective reduction of (5S,6RS)-6-alkyl-5-benzyloxy-6-hydroxy-2-piperidinones 6 and their tautomeric ring-opened keto amides 7 is described. The reduction with l-Selectride at -20 °C to room temperature afforded the products 10 in excellent yields and moderate to high syn-diastereoselectivities.
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Affiliation(s)
| | | | | | - Liang-Xian Liu
- Author to whom correspondence should be addressed; E-Mail: ; Tel: +86-797-8397630; Fax: +86-797-8393670
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Bräse S, Encinas A, Keck J, Nising CF. Chemistry and Biology of Mycotoxins and Related Fungal Metabolites. Chem Rev 2009; 109:3903-90. [DOI: 10.1021/cr050001f] [Citation(s) in RCA: 411] [Impact Index Per Article: 27.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Stefan Bräse
- Institut für Organische Chemie,Karlsruhe Institute of Technology, Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Arantxa Encinas
- Institut für Organische Chemie,Karlsruhe Institute of Technology, Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Julia Keck
- Institut für Organische Chemie,Karlsruhe Institute of Technology, Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
| | - Carl F. Nising
- Institut für Organische Chemie,Karlsruhe Institute of Technology, Fritz-Haber-Weg 6, D-76131 Karlsruhe, Germany
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Nolen EG, Donahue LA, Greaves R, Daly TA, Calabrese DR. Syntheses of α- and β-C-Glucopyranosyl Serines from a Common Intermediate. Org Lett 2008; 10:4911-4. [DOI: 10.1021/ol802009v] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ernest G. Nolen
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346
| | - Laurence A. Donahue
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346
| | - Rebecca Greaves
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346
| | - Trevor A. Daly
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346
| | - David R. Calabrese
- Department of Chemistry, Colgate University, 13 Oak Drive, Hamilton, New York 13346
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Herndon JW. The chemistry of the carbon–transition metal double and triple bond: Annual survey covering the year 2005. Coord Chem Rev 2007. [DOI: 10.1016/j.ccr.2006.11.002] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Fürstner A, Nagano T, Müller C, Seidel G, Müller O. Total Synthesis and Evaluation of the Actin-Binding Properties of Microcarpalide and a Focused Library of Analogues. Chemistry 2007; 13:1452-62. [PMID: 17124714 DOI: 10.1002/chem.200601370] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
A comparative investigation shows that hydroxylated 10-membered lactones modeled around the fungal metabolites microcarpalide (1) and pinolidoxin (2) are endowed with selective actin-binding properties. Although less potent than the marine natural product latrunculin A, which represents the standard in the field, nonenolides of this type are significantly less toxic and accommodate substantial structural editing. Most notable is the fact that even an intramolecular transesterification with formation of a hydroxylated butanolide skeleton does not annihilate their microfilament disrupting capacity. This finding calls for a reinvestigation of the biological profile of other fungal metabolites that embody a similar motif. Microcarpalide (1) serving as the calibration point for this comparative study was prepared by total synthesis based on ring-closing metathesis (RCM) as the key step. The chosen route favorably compares to previous approaches to this target and provides further support for the notion that the (E,Z)-configuration of a medium-sized cycloalkene can be controlled by proper choice of the catalyst as previously outlined by our group. 9-epi-Microcarpalide 26 and furanone 27 as representative examples of the "natural productlike" compounds investigated herein have been characterized by crystal structure analysis.
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Affiliation(s)
- Alois Fürstner
- Max-Planck-Institut für Kohlenforschung, 45470 Mülheim/Ruhr, Germany.
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Prasad KR, Penchalaiah K, Choudhary A, Anbarasan P. Stereoselective synthesis of (−)-microcarpalide. Tetrahedron Lett 2007. [DOI: 10.1016/j.tetlet.2006.11.027] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Ribes C, Falomir E, Carda M, Marco J. Stereoselective synthesis of pachastrissamine (jaspine B). Tetrahedron 2006. [DOI: 10.1016/j.tet.2006.03.073] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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