Deforestation in Latin America in the 2000s predominantly occurred outside of typical mature forests

The role of tropical forests in the global carbon budget remains controversial, as carbon emissions from deforestation are highly uncertain. This high uncertainty arises from the use of either fixed forest carbon stock density or maps generated from satellite-based optical reflectance with limited sensitivity to biomass to generate accurate estimates of emissions from deforestation. New space missions aiming to accurately map the carbon stock density rely on direct measurements of the spatial structures of forests using lidar and radar. We found that lost forests are special cases, and their spatial structures can be directly measured by combining archived data acquired before and after deforestation by space missions principally aimed at measuring topography. Thus, using biomass mapping, we obtained new estimates of carbon loss from deforestation ahead of forthcoming space missions. Here, using a high-resolution map of forest loss and the synergy of radar and lidar to estimate the aboveground biomass density of forests, we found that deforestation in the 2000s in Latin America, one of the severely deforested regions, mainly occurred in forests with a significantly lower carbon stock density than typical mature forests. Deforestation areas with carbon stock densities lower than 20.0, 50.0, and 100.0 Mg C/ha accounted for 42.1%, 62.0%, and 83.3% of the entire deforested area, respectively. The average carbon stock density of lost forests was only 49.13 Mg C/ha, which challenges the current knowledge on the carbon stock density of lost forests (with a default value 100 Mg C/ha according to the Intergovernmental Panel on Climate Change Tier 1 estimates, or approximately 112 Mg C/ha used in other studies). This is demonstrated over both the entire region and the footprints of the spaceborne lidar. Consequently, our estimate of carbon loss from deforestation in Latin America in the 2000s was 253.0 ± 21.5 Tg C/year, which was considerably less than existing remote-sensing-based estimates, namely 400-600 Tg C/year. This indicates that forests in Latin America were most likely not a net carbon source in the 2000s compared to established carbon sinks. In previous studies, considerable effort has been devoted to rectify the underestimation of carbon sinks; thus, the overestimation of carbon emissions should be given sufficient consideration in global carbon budgets. Our results also provide solid evidence for the necessity of renewing knowledge on the role of tropical forests in the global carbon budget in the future using observations from new space missions.

Geospatial technology in agroforestry: status, prospects, and constraints

Agroforestry has an indispensable role in food and livelihood security in addition to its capacity to combat the detrimental effects of climate change. However, agroforestry has not been properly promoted and exploited due to lack of precise extent, geographical distribution, and carbon sequestration (CS) assessment. The recent advent of geospatial technologies, as well as free availability of spatial data and software, can provide new insights into agroforestry resources assessment, decision-making, and policy development despite agroforestry's small spatial extent, isolated nature, and higher structural and functional complexity of agroforestry. In this review, the existing application of geospatial technologies together with its constraints and limitations as well as the potential future application for agroforestry has been discussed. The review reveals that the application of optical remote sensing in agroforestry includes spatial extent mapping, production of tree species spectral signature, CS assessment, and suitability mapping. Simultaneously, the recent surge in the use of synthetic aperture radar in conjunction with algorithms based on vegetation photosynthesis and optical data enables a more accurate estimation of gross primary productivity at different scales. However, unmanned aerial vehicles equipped with sensors, such as multispectral, LiDAR, hyperspectral, and thermal, offer a considerably higher potential and accuracy than satellite-based datasets. In the future, the health monitoring of agroforestry systems can be a key concern that may be addressed by utilizing hyperspectral and thermal datasets to analyze plant biochemistry, chlorophyll fluorescence, and water stress. Additionally, current (GEDI, ECOSTRESS) and future space agency missions (BIOMASS, FLEX, NISAR, TRISHNA) have enormous potential to shed fresh light on agroforestry systems.

Reducing model uncertainty of climate change impacts on high latitude carbon assimilation

The Arctic-Boreal Region (ABR) has a large impact on global vegetation-atmosphere interactions and is experiencing markedly greater warming than the rest of the planet, a trend that is projected to continue with anticipated future emissions of CO₂ . The ABR is a significant source of uncertainty in estimates of carbon uptake in terrestrial biosphere models such that reducing this uncertainty is critical for more accurately estimating global carbon cycling and understanding the response of the region to global change. Process representation and parameterization associated with gross primary productivity (GPP) drives a large amount of this model uncertainty, particularly within the next 50 years, where the response of existing vegetation to climate change will dominate estimates of GPP for the region. Here we review our current understanding and model representation of GPP in northern latitudes, focusing on vegetation composition, phenology, and physiology, and consider how climate change alters these three components. We highlight challenges in the ABR for predicting GPP, but also focus on the unique opportunities for advancing knowledge and model representation, particularly through the combination of remote sensing and traditional boots-on-the-ground science.

Estimating Aboveground Biomass in Dense Hyrcanian Forests by the Use of Sentinel-2 Data

Due to the challenges brought by field measurements to estimate the aboveground biomass (AGB), such as the remote locations and difficulties in walking in these areas, more accurate and cost-effective methods are required, by the use of remote sensing. In this study, Sentinel-2 data were used for estimating the AGB in pure stands of Carpinus betulus (L., common hornbeam) located in the Hyrcanian forests, northern Iran. For this purpose, the diameter at breast height (DBH) of all trees thicker than 7.5 cm was measured in 55 square plots (45 × 45 m). In situ AGB was estimated using a local volume table and the specific density of wood. To estimate the AGB from remotely sensed data, parametric and nonparametric methods, including Multiple Regression (MR), Artificial Neural Network (ANN), k-Nearest Neighbor (kNN), and Random Forest (RF), were applied to a single image of the Sentinel-2, having as a reference the estimations produced by in situ measurements and their corresponding spectral values of the original spectral (B2, B3, B4, B5, B6, B7, B8, B8a, B11, and B12) and derived synthetic (IPVI, IRECI, GEMI, GNDVI, NDVI, DVI, PSSRA, and RVI) bands. Band 6 located in the red-edge region (0.740 nm) showed the highest correlation with AGB (r = −0.723). A comparison of the machine learning methods indicated that the ANN algorithm returned the best ABG-estimating performance (%RMSE = 19.9). This study demonstrates that simple vegetation indices extracted from Sentinel-2 multispectral imagery can provide good results in the AGB estimation of C. betulus trees of the Hyrcanian forests. The approach used in this study may be extended to similar areas located in temperate forests.

Use of Remote Sensing Data to Improve the Efficiency of National Forest Inventories: A Case Study from the United States National Forest Inventory

Globally, forests are a crucial natural resource, and their sound management is critical for human and ecosystem health and well-being. Efforts to manage forests depend upon reliable data on the status of and trends in forest resources. When these data come from well-designed natural resource monitoring (NRM) systems, decision makers can make science-informed decisions. National forest inventories (NFIs) are a cornerstone of NRM systems, but require capacity and skills to implement. Efficiencies can be gained by incorporating auxiliary information derived from remote sensing (RS) into ground-based forest inventories. However, it can be difficult for countries embarking on NFI development to choose among the various RS integration options, and to develop a harmonized vision of how NFI and RS data can work together to meet monitoring needs. The NFI of the United States, which has been conducted by the USDA Forest Service’s (USFS) Forest Inventory and Analysis (FIA) program for nearly a century, uses RS technology extensively. Here we review the history of the use of RS in FIA, beginning with general background on NFI, FIA, and sampling statistics, followed by a description of the evolution of RS technology usage, beginning with paper aerial photography and ending with present day applications and future directions. The goal of this review is to offer FIA’s experience with NFI-RS integration as a case study for other countries wishing to improve the efficiency of their NFI programs.

Parametric Models to Characterize the Phenology of the Lowveld Savanna at Skukuza, South Africa

Mathematical models, such as the logistic curve, have been extensively used to model the temporal evolution of biological processes, though other similarly shaped functions could be (and sometimes have been) used for this purpose. Most previous studies focused on agricultural regions in the Northern Hemisphere and were based on the Normalized Difference Vegetation Index (NDVI). This paper compares the capacity of four parametric double S-shaped models (Gaussian, Hyperbolic Tangent, Logistic, and Sine) to represent the seasonal phenology of an unmanaged, protected savanna biome in South Africa’s Lowveld, using the Fraction of Absorbed Photosynthetically Active Radiation (FAPAR) generated by the Multi-angle Imaging SpectroRadiometer-High Resolution (MISR-HR) processing system on the basis of data originally collected by National Aeronautics and Space Administration (NASA)’s Multi-angle Imaging SpectroRadiometer (MISR) instrument since 24 February 2000. FAPAR time series are automatically split into successive vegetative seasons, and the models are inverted against those irregularly spaced data to provide a description of the seasonal fluctuations despite the presence of noise and missing values. The performance of these models is assessed by quantifying their ability to account for the variability of remote sensing data and to evaluate the Gross Primary Productivity (GPP) of vegetation, as well as by evaluating their numerical efficiency. Simulated results retrieved from remote sensing are compared to GPP estimates derived from field measurements acquired at Skukuza’s flux tower in the Kruger National Park, which has also been operational since 2000. Preliminary results indicate that (1) all four models considered can be adjusted to fit an FAPAR time series when the temporal distribution of the data is sufficiently dense in both the growing and the senescence phases of the vegetative season, (2) the Gaussian and especially the Sine models are more sensitive than the Hyperbolic Tangent and Logistic to the temporal distribution of FAPAR values during the vegetative season, and, in particular, to the presence of long temporal gaps in the observational data, and (3) the performance of these models to simulate the phenology of plants is generally quite sensitive to the presence of unexpectedly low FAPAR values during the peak period of activity and to the presence of long gaps in the observational data. Consequently, efforts to screen out outliers and to minimize those gaps, especially during the rainy season (vegetation’s growth phase), would go a long way to improve the capacity of the models to adequately account for the evolution of the canopy cover and to better assess the relation between FAPAR and GPP.

Forest aboveground biomass estimation using Landsat 8 and Sentinel-1A data with machine learning algorithms

Forest aboveground biomass (AGB) plays an important role in the study of the carbon cycle and climate change in the global terrestrial ecosystem. AGB estimation based on remote sensing is an effective method for regional scale. In this study, Landsat 8 Operational Land Imager and Sentinel-1A data and China's National Forest Continuous Inventory data in combination with three algorithms, either the linear regression (LR), random forest (RF), or the extreme gradient boosting (XGBoost), were used to estimate biomass of the subtropical forests in Hunan Province, China. XGBoost is a scalable tree boosting system that is widely used by data scientists and provides state-of-the-art results for many problems. It can process an entire dataset with billions of examples using a minimal amount of computational resources through the particular way of cache access patterns, data compression, and data fragmentation. The results include: (1) The combination of Landsat 8 and Sentinel-1A images as predictor variables in the XGBoost model provided the best AGB estimation. (2) In contrast to the LR method, the F-test results indicated that a significant improvement in AGB estimation was achieved with the RF and XGBoost algorithms. (3) The effect of parameter optimization was found to be more significant on XGBoost than on RF. (4) The XGBoost model is an effective method for AGB estimation and can reduce the problems of overestimation and underestimation. This research provides a new way of estimating AGB for the subtropical forest based on remote sensing through the synergy of different sensors datasets and modeling algorithms.

A Structural Classification of Australian Vegetation Using ICESat/GLAS, ALOS PALSAR, and Landsat Sensor Data

Australia has historically used structural descriptors of height and cover to characterize, differentiate, and map the distribution of woody vegetation across the continent but no national satellite-based structural classification has been available. In this study, we present a new 30-m spatial resolution reference map of Australian forest and woodland structure (height and cover), with this generated by integrating Landsat Thematic Mapper (TM) and Enhanced TM, Advanced Land Observing Satellite (ALOS) Phased Arrayed L-band Synthetic Aperture Radar (PALSAR) and Ice, Cloud, and land Elevation (ICESat),and Geoscience Laser Altimeter System (GLAS) data. ALOS PALSAR and Landsat-derived Foliage Projective Cover (FPC) were used to segment and classify the Australian landscape. Then, from intersecting ICESat waveform data, vertical foliage profiles and height metrics (e.g., 95% percentile height, mean height and the height to maximum vegetation density) were extracted for each of the classes generated. Within each class, and for selected areas, the variability in ICESat profiles was found to be similar with differences between segments of the same class attributed largely to clearance or disturbance events. ICESat metrics and profiles were then assigned to all remaining segments across Australia with the same class allocation. Validation against airborne LiDAR for a range of forest structural types indicated a high degree of correspondence in estimated height measures. On this basis, a map of vegetation height was generated at a national level and was combined with estimates of cover to produce a revised structural classification based on the scheme of the Australian National Vegetation Information System (NVIS). The benefits of integrating the three datasets for segmenting and classifying the landscape and retrieving biophysical attributes was highlighted with this leading the way for future mapping using ALOS-2 PALSAR-2, Landsat/Sentinel-2, Global Ecosystem Dynamics Investigation (GEDI), and ICESat-2 LiDAR data. The ability to map across large areas provides considerable benefits for quantifying carbon dynamics and informing on biodiversity metrics.

Indirect Estimation of Structural Parameters in South African Forests Using MISR-HR and LiDAR Remote Sensing Data

Forest structural data are essential for assessing biophysical processes and changes, and promoting sustainable forest management. For 18+ years, the Multi-Angle Imaging SpectroRadiometer (MISR) instrument has been observing the land surface reflectance anisotropy, which is known to be related to vegetation structure. This study sought to determine the performance of a new MISR-High Resolution (HR) dataset, recently produced at a full 275 m spatial resolution, and consisting of 36 Bidirectional Reflectance Factors (BRF) and 12 Rahman–Pinty–Verstraete (RPV) parameters, to estimate the mean tree height (Hmean) and canopy cover (CC) across structurally diverse, heterogeneous, and fragmented forest types in South Africa. Airborne LiDAR data were used to train and validate Random Forest models which were tested across various MISR-HR scenarios. The combination of MISR multi-angular and multispectral data was consistently effective in improving the estimation of structural parameters, and produced the lowest relative root mean square error (rRMSE) (33.14% and 38.58%), for Hmean and CC respectively. The combined RPV parameters for all four bands yielded the best results in comparison to the models of the RPV parameters separately: Hmean (R2 = 0.71, rRMSE = 34.84%) and CC (R2 = 0.60, rRMSE = 40.96%). However, the combined RPV parameters for all four bands in comparison to the MISR-HR BRF 36 band model it performed poorer (rRMSE of 5.1% and 6.2% higher for Hmean and CC, respectively). When considered separately, savanna forest type had greater improvement when adding multi-angular data, with the highest accuracies obtained for the Hmean parameter (R2 of 0.67, rRMSE of 31.28%). The findings demonstrate the potential of the optical multi-spectral and multi-directional newly processed data (MISR-HR) for estimating forest structure across Southern African forest types.

Plant phenomics: an overview of image acquisition technologies and image data analysis algorithms

The study of phenomes or phenomics has been a central part of biology. The field of automatic phenotype acquisition technologies based on images has seen an important advance in the last years. As with other high-throughput technologies, it addresses a common set of problems, including data acquisition and analysis. In this review, we give an overview of the main systems developed to acquire images. We give an in-depth analysis of image processing with its major issues and the algorithms that are being used or emerging as useful to obtain data out of images in an automatic fashion.

Spaceborne potential for examining taiga-tundra ecotone form and vulnerability

In the taiga-tundra ecotone (TTE), site-dependent forest structure characteristics can influence the subtle and heterogeneous structural changes that occur across the broad circumpolar extent. Such changes may be related to ecotone form, described by the horizontal and vertical patterns of forest structure (e.g., tree cover, density and height) within TTE forest patches, driven by local site conditions, and linked to ecotone dynamics. The unique circumstance of subtle, variable and widespread vegetation change warrants the application of spaceborne data including high-resolution (< 5m) spaceborne imagery (HRSI) across broad scales for examining TTE form and predicting dynamics. This study analyzes forest structure at the patch-scale in the TTE to provide a means to examine both vertical and horizontal components of ecotone form. We demonstrate the potential of spaceborne data for integrating forest height and density to assess TTE form at the scale of forest patches across the circumpolar biome by (1) mapping forest patches in study sites along the TTE in northern Siberia with a multi-resolution suite of spaceborne data, and (2) examining the uncertainty of forest patch height from this suite of data across sites of primarily diffuse TTE forms. Results demonstrate the opportunities for improving patch-scale spaceborne estimates of forest height, the vertical component of TTE form, with HRSI. The distribution of relative maximum height uncertainty based on prediction intervals is centered at ~40%, constraining the use of height for discerning differences in forest patches. We discuss this uncertainty in light of a conceptual model of general ecotone forms, and highlight how the uncertainty of spaceborne estimates of height can contribute to the uncertainty in identifying TTE forms. A focus on reducing the uncertainty of height estimates in forest patches may improve depiction of TTE form, which may help explain variable forest responses in the TTE to climate change and the vulnerability of portions of the TTE to forest structure change.

Local discrepancies in continental scale biomass maps: a case study over forested and non-forested landscapes in Maryland, USA

BACKGROUND

Continental-scale aboveground biomass maps are increasingly available, but their estimates vary widely, particularly at high resolution. A comprehensive understanding of map discrepancies is required to improve their effectiveness in carbon accounting and local decision-making. To this end, we compare four continental-scale maps with a recent high-resolution lidar-derived biomass map over Maryland, USA. We conduct detailed comparisons at pixel-, county-, and state-level.

RESULTS

Spatial patterns of biomass are broadly consistent in all maps, but there are large differences at fine scales (RMSD 48.5-92.7 Mg ha^-1). Discrepancies reduce with aggregation and the agreement among products improves at the county level. However, continental scale maps exhibit residual negative biases in mean (33.0-54.6 Mg ha^-1) and total biomass (3.5-5.8 Tg) when compared to the high-resolution lidar biomass map. Three of the four continental scale maps reach near-perfect agreement at ~4 km and onward but do not converge with the high-resolution biomass map even at county scale. At the State level, these maps underestimate biomass by 30-80 Tg in forested and 40-50 Tg in non-forested areas.

CONCLUSIONS

Local discrepancies in continental scale biomass maps are caused by factors including data inputs, modeling approaches, forest/non-forest definitions and time lags. There is a net underestimation over high biomass forests and non-forested areas that could impact carbon accounting at all levels. Local, high-resolution lidar-derived biomass maps provide a valuable bottom-up reference to improve the analysis and interpretation of large-scale maps produced in carbon monitoring systems.

The influence of vegetation height heterogeneity on forest and woodland bird species richness across the United States

Avian diversity is under increasing pressures. It is thus critical to understand the ecological variables that contribute to large scale spatial distribution of avian species diversity. Traditionally, studies have relied primarily on two-dimensional habitat structure to model broad scale species richness. Vegetation vertical structure is increasingly used at local scales. However, the spatial arrangement of vegetation height has never been taken into consideration. Our goal was to examine the efficacies of three-dimensional forest structure, particularly the spatial heterogeneity of vegetation height in improving avian richness models across forested ecoregions in the U.S. We developed novel habitat metrics to characterize the spatial arrangement of vegetation height using the National Biomass and Carbon Dataset for the year 2000 (NBCD). The height-structured metrics were compared with other habitat metrics for statistical association with richness of three forest breeding bird guilds across Breeding Bird Survey (BBS) routes: a broadly grouped woodland guild, and two forest breeding guilds with preferences for forest edge and for interior forest. Parametric and non-parametric models were built to examine the improvement of predictability. Height-structured metrics had the strongest associations with species richness, yielding improved predictive ability for the woodland guild richness models (r(2) = ∼ 0.53 for the parametric models, 0.63 the non-parametric models) and the forest edge guild models (r(2) = ∼ 0.34 for the parametric models, 0.47 the non-parametric models). All but one of the linear models incorporating height-structured metrics showed significantly higher adjusted-r2 values than their counterparts without additional metrics. The interior forest guild richness showed a consistent low association with height-structured metrics. Our results suggest that height heterogeneity, beyond canopy height alone, supplements habitat characterization and richness models of forest bird species. The metrics and models derived in this study demonstrate practical examples of utilizing three-dimensional vegetation data for improved characterization of spatial patterns in species richness.