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Bönstrup M, Schneider T, Bräuer A, Ader J, Villringer A, Classen J. Brain-wide spatial mapping of oscillatory activity during naturalistic motor behavior. J Neurophysiol 2025; 133:1583-1593. [PMID: 40249924 DOI: 10.1152/jn.00500.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2024] [Revised: 12/15/2024] [Accepted: 04/12/2025] [Indexed: 04/20/2025] Open
Abstract
Understanding oscillatory neural activity associated with motor behavior is greatly contributing to the development of neuroprosthetic systems, robotic interfaces, and advanced neurorehabilitation techniques. Most current knowledge about movement-specific patterns of cortical activity is derived from laboratory experiments using highly standardized, repetitive, and often meaningless movements that are very distinct from natural motor behavior. This is characterized by frequent task switching, diverse kinematics, and endogenous motivation. Whether observed patterns of movement-related neural activity during standard laboratory tasks can be generalized to natural motor behavior is largely unknown. Here, we investigated the spatial, spectral, and temporal features of oscillatory neural activity associated with human motor control in a parkour of everyday movements. We replicated strong and significant decreases in the alpha/beta frequency range before movement onset and further show that this power decrease began about 2 s before movement initiation and reached a nadir around movement onset. In addition to the sustained event-related decrease in the alpha/beta range, we identified brief (4-5 cycles) increases in low-frequency activity (3-5 Hz) that either preceded or peaked at movement onset. These low-frequency increases exhibited much greater focality and lateralization compared with the wide-spread alpha/beta decrease. Together, our results provide a comprehensive account of brain rhythmic electric activity across spatial, spectral, and temporal scales in naturalistic motor behavior. Movement-preceding low-frequency activity has previously been identified as a promising brain stimulation target in patients with stroke. Detectability of low-frequency activity in naturalistic movements may enhance its utility as a target for on-demand brain stimulation in neurorehabilitation.NEW & NOTEWORTHY We here provide a comprehensive account of brain rhythmic electric activity across spatial, spectral, and temporal scales, associated with ecologically valid, freely chosen, auditory cued, and visually guided movements of either hand. New and noteworthy, the brain-wide topography of movement preceding, short-lasting increases in low-frequency activity (3-5 Hz), recently identified as a promising target for on-demand neurostimulation in stroke rehabilitation, is described and compared with classically studied sensorimotor rhythms.
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Affiliation(s)
- Marlene Bönstrup
- Department of Neurology, Goethe University Frankfurt, University Hospital, Frankfurt, Germany
- Department of Neurology, Leipzig University Medical Center, Leipzig, Germany
- Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Tobias Schneider
- Department of Neurology, Leipzig University Medical Center, Leipzig, Germany
| | - Anne Bräuer
- Department of Neurology, Leipzig University Medical Center, Leipzig, Germany
| | - Jonas Ader
- Department of Neurology, Leipzig University Medical Center, Leipzig, Germany
| | - Arno Villringer
- Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- Day Clinic for Cognitive Neurology, Leipzig University Medical Center, Leipzig, Germany
| | - Joseph Classen
- Department of Neurology, Leipzig University Medical Center, Leipzig, Germany
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2
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Alcolea PI, Ma X, Bodkin K, Miller LE, Danziger ZC. Less is more: selection from a small set of options improves BCI velocity control. J Neural Eng 2025; 22:10.1088/1741-2552/adbcd9. [PMID: 40043320 PMCID: PMC12051477 DOI: 10.1088/1741-2552/adbcd9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2024] [Accepted: 03/05/2025] [Indexed: 03/12/2025]
Abstract
Objective.Decoding algorithms used in invasive brain-computer interfaces (iBCIs) typically convert neural activity into continuously varying velocity commands. We hypothesized that putting constraints on which decoded velocity commands are permissible could improve user performance. To test this hypothesis, we designed the discrete direction selection (DDS) decoder, which uses neural activity to select among a small menu of preset cursor velocities.Approach. We tested DDS in a closed-loop cursor control task against many common continuous velocity decoders in both a human-operated real-time iBCI simulator (the jaBCI) and in a monkey using an iBCI. In the jaBCI, we compared performance across four visits by each of 48 naïve, able-bodied human subjects using either DDS, direct regression with assist (an affine map from neural activity to cursor velocity, DR-A), ReFIT, or the velocity Kalman Filter (vKF). In a follow up study to verify the jaBCI results, we compared a monkey's performance using an iBCI with either DDS or the Wiener filter decoder (a direct regression decoder that includes time history, WF).Main Result. In the jaBCI, DDS substantially outperformed all other decoders with 93% mean targets hit per visit compared to DR-A, ReFIT, and vKF with 56%, 39%, and 26% mean targets hit, respectively. With the iBCI, the monkey achieved a 61% success rate with DDS and a 37% success rate with WF.Significance. Discretizing the decoded velocity with DDS effectively traded high resolution velocity commands for less tortuous and lower noise trajectories, highlighting the potential benefits of discretization in simplifying online BCI control.
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Affiliation(s)
- Pedro I Alcolea
- Department of Biomedical Engineering, Florida International University, Miami, FL 33199, United States of America
| | - Xuan Ma
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, United States of America
| | - Kevin Bodkin
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, United States of America
| | - Lee E Miller
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, United States of America
- Department of Physical Medicine and Rehabilitation, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, United States of America
- Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, IL 60208, United States of America
- Shirley Ryan AbilityLab, Chicago, IL 60611, United States of America
| | - Zachary C Danziger
- Department of Biomedical Engineering, Florida International University, Miami, FL 33199, United States of America
- Department of Rehabilitation Medicine—Division of Physical Therapy, Emory University, Atlanta, GA 30322, United States of America
- W.H. Coulter Department of Biomedical Engineering, Emory University Atlanta, Atlanta, GA 30322, United States of America
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3
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Ianni GR, Vázquez Y, Rouse AG, Schieber MH, Prut Y, Freiwald WA. Facial gestures are enacted via a cortical hierarchy of dynamic and stable codes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.03.641159. [PMID: 40161717 PMCID: PMC11952350 DOI: 10.1101/2025.03.03.641159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
Successful communication requires the generation and perception of a shared set of signals. Facial gestures are one fundamental set of communicative behaviors in primates, generated through the dynamic arrangement of dozens of fine muscles. While much progress has been made uncovering the neural mechanisms of face perception, little is known about those controlling facial gesture production. Commensurate with the importance of facial gestures in daily social life, anatomical work has shown that facial muscles are under direct control from multiple cortical regions, including primary and premotor in lateral frontal cortex, and cingulate in medial frontal cortex. Furthermore, neuropsychological evidence from focal lesion patients has suggested that lateral cortex controls voluntary movements, and medial emotional expressions. Here we show that lateral and medial cortical face motor regions encode both types of gestures. They do so through unique temporal activity patterns, distinguishable well-prior to movement onset. During gesture production, cortical regions encoded facial kinematics in a context-dependent manner. Our results show how cortical regions projecting in parallel downstream, but each situated at a different level of a posterior-anterior hierarchy form a continuum of gesture coding from dynamic to temporally stable, in order to produce context-related, coherent motor outputs during social communication.
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4
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Moore DD, MacLean JN, Walker JD, Hatsopoulos NG. A dynamic subset of network interactions underlies tuning to natural movements in marmoset sensorimotor cortex. Nat Commun 2024; 15:10517. [PMID: 39627212 PMCID: PMC11615226 DOI: 10.1038/s41467-024-54343-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Accepted: 11/06/2024] [Indexed: 12/06/2024] Open
Abstract
Mechanisms of computation in sensorimotor cortex must be flexible and robust to support skilled motor behavior. Patterns of neuronal coactivity emerge as a result of computational processes. Pairwise spike-time statistical relationships, across the population, can be summarized as a functional network (FN) which retains single-unit properties. We record populations of single-unit neural activity in marmoset forelimb sensorimotor cortex during prey capture and spontaneous behavior and use an encoding model incorporating kinematic trajectories and network features to predict single-unit activity during forelimb movements. The contribution of network features depends on structured connectivity within strongly connected functional groups. We identify a context-specific functional group that is highly tuned to kinematics and reorganizes its connectivity between spontaneous and prey capture movements. In the remaining context-invariant group, interactions are comparatively stable across behaviors and units are less tuned to kinematics. This suggests different roles in producing natural forelimb movements and contextualizes single-unit tuning properties within population dynamics.
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Affiliation(s)
- Dalton D Moore
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, 60637, USA
| | - Jason N MacLean
- Committee on Computational Neuroscience, University of Chicago, Chicago, IL, 60637, USA
- Department of Neurobiology, University of Chicago, Chicago, IL, 60637, USA
- University of Chicago Neuroscience Institute, Chicago, IL, 60637, USA
| | - Jeffrey D Walker
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, 60637, USA
| | - Nicholas G Hatsopoulos
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, 60637, USA.
- Committee on Computational Neuroscience, University of Chicago, Chicago, IL, 60637, USA.
- University of Chicago Neuroscience Institute, Chicago, IL, 60637, USA.
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5
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Gozel O, Doiron B. Between-area communication through the lens of within-area neuronal dynamics. SCIENCE ADVANCES 2024; 10:eadl6120. [PMID: 39413191 PMCID: PMC11482330 DOI: 10.1126/sciadv.adl6120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Accepted: 09/13/2024] [Indexed: 10/18/2024]
Abstract
A core problem in systems and circuits neuroscience is deciphering the origin of shared dynamics in neuronal activity: Do they emerge through local network interactions, or are they inherited from external sources? We explore this question with large-scale networks of spatially ordered spiking neuron models where a downstream network receives input from an upstream sender network. We show that linear measures of the communication between the sender and receiver networks can discriminate between emergent or inherited population dynamics. A match in the dimensionality of the sender and receiver population activities promotes faithful communication. In contrast, a nonlinear mapping between the sender to receiver activity, for example, through downstream emergent population-wide fluctuations, can impair linear communication. Our work exposes the benefits and limitations of linear measures when analyzing between-area communication in circuits with rich population-wide neuronal dynamics.
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Affiliation(s)
- Olivia Gozel
- Departments of Neurobiology and Statistics, University of Chicago, Chicago, IL 60637, USA
- Grossman Center for Quantitative Biology and Human Behavior, University of Chicago, Chicago, IL 60637, USA
| | - Brent Doiron
- Departments of Neurobiology and Statistics, University of Chicago, Chicago, IL 60637, USA
- Grossman Center for Quantitative Biology and Human Behavior, University of Chicago, Chicago, IL 60637, USA
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6
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Sabatini DA, Kaufman MT. Reach-dependent reorientation of rotational dynamics in motor cortex. Nat Commun 2024; 15:7007. [PMID: 39143078 PMCID: PMC11325044 DOI: 10.1038/s41467-024-51308-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Accepted: 08/05/2024] [Indexed: 08/16/2024] Open
Abstract
During reaching, neurons in motor cortex exhibit complex, time-varying activity patterns. Though single-neuron activity correlates with movement parameters, movement correlations explain neural activity only partially. Neural responses also reflect population-level dynamics thought to generate outputs. These dynamics have previously been described as "rotational," such that activity orbits in neural state space. Here, we reanalyze reaching datasets from male Rhesus macaques and find two essential features that cannot be accounted for with standard dynamics models. First, the planes in which rotations occur differ for different reaches. Second, this variation in planes reflects the overall location of activity in neural state space. Our "location-dependent rotations" model fits nearly all motor cortex activity during reaching, and high-quality decoding of reach kinematics reveals a quasilinear relationship with spiking. Varying rotational planes allows motor cortex to produce richer outputs than possible under previous models. Finally, our model links representational and dynamical ideas: representation is present in the state space location, which dynamics then convert into time-varying command signals.
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Affiliation(s)
- David A Sabatini
- Department of Organismal Biology and Anatomy, The University of Chicago, Chicago, IL, 60637, USA
- Neuroscience Institute, The University of Chicago, Chicago, IL, 60637, USA
| | - Matthew T Kaufman
- Department of Organismal Biology and Anatomy, The University of Chicago, Chicago, IL, 60637, USA.
- Neuroscience Institute, The University of Chicago, Chicago, IL, 60637, USA.
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7
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Tostado-Marcos P, Arneodo EM, Ostrowski L, Brown DE, Perez XA, Kadwory A, Stanwicks LL, Alothman A, Gentner TQ, Gilja V. Neural population dynamics in songbird RA and HVC during learned motor-vocal behavior. ARXIV 2024:arXiv:2407.06244v1. [PMID: 39040642 PMCID: PMC11261980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Subscribe] [Scholar Register] [Indexed: 07/24/2024]
Abstract
Complex, learned motor behaviors involve the coordination of large-scale neural activity across multiple brain regions, but our understanding of the population-level dynamics within different regions tied to the same behavior remains limited. Here, we investigate the neural population dynamics underlying learned vocal production in awake-singing songbirds. We use Neuropixels probes to record the simultaneous extracellular activity of populations of neurons in two regions of the vocal motor pathway. In line with observations made in non-human primates during limb-based motor tasks, we show that the population-level activity in both the premotor nucleus HVC and the motor nucleus RA is organized on low-dimensional neural manifolds upon which coordinated neural activity is well described by temporally structured trajectories during singing behavior. Both the HVC and RA latent trajectories provide relevant information to predict vocal sequence transitions between song syllables. However, the dynamics of these latent trajectories differ between regions. Our state-space models suggest a unique and continuous-over-time correspondence between the latent space of RA and vocal output, whereas the corresponding relationship for HVC exhibits a higher degree of neural variability. We then demonstrate that comparable high-fidelity reconstruction of continuous vocal outputs can be achieved from HVC and RA neural latents and spiking activity. Unlike those that use spiking activity, however, decoding models using neural latents generalize to novel sub-populations in each region, consistent with the existence of preserved manifolds that confine vocal-motor activity in HVC and RA.
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Affiliation(s)
- Pablo Tostado-Marcos
- Department of Bioengineering
- Department of Electrical and Computer Engineering
- Department of Psychology
| | | | - Lauren Ostrowski
- Neurosciences Graduate Program, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Daril E Brown
- Department of Electrical and Computer Engineering
- Department of Psychology
| | | | - Adam Kadwory
- Department of Electrical and Computer Engineering
| | - Lauren L Stanwicks
- Neurosciences Graduate Program, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | | | - Timothy Q Gentner
- Department of Psychology
- Department of Neurobiology
- Neurosciences Graduate Program, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Vikash Gilja
- Department of Electrical and Computer Engineering
- Neurosciences Graduate Program, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
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8
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Alcolea P, Ma X, Bodkin K, Miller LE, Danziger ZC. Less is more: selection from a small set of options improves BCI velocity control. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.03.596241. [PMID: 38895473 PMCID: PMC11185569 DOI: 10.1101/2024.06.03.596241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
We designed the discrete direction selection (DDS) decoder for intracortical brain computer interface (iBCI) cursor control and showed that it outperformed currently used decoders in a human-operated real-time iBCI simulator and in monkey iBCI use. Unlike virtually all existing decoders that map between neural activity and continuous velocity commands, DDS uses neural activity to select among a small menu of preset cursor velocities. We compared closed-loop cursor control across four visits by each of 48 naïve, able-bodied human subjects using either DDS or one of three common continuous velocity decoders: direct regression with assist (an affine map from neural activity to cursor velocity), ReFIT, and the velocity Kalman Filter. DDS outperformed all three by a substantial margin. Subsequently, a monkey using an iBCI also had substantially better performance with DDS than with the Wiener filter decoder (direct regression decoder that includes time history). Discretizing the decoded velocity with DDS effectively traded high resolution velocity commands for less tortuous and lower noise trajectories, highlighting the potential benefits of simplifying online iBCI control.
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Affiliation(s)
- Pedro Alcolea
- Department of Biomedical Engineering, Florida International University, Miami, FL 33199, USA
| | - Xuan Ma
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
| | - Kevin Bodkin
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
| | - Lee E. Miller
- Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
- Department of Physical Medicine and Rehabilitation, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
- Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, IL 60208, USA
- Shirley Ryan AbilityLab, Chicago, IL 60611, USA
| | - Zachary C. Danziger
- Department of Biomedical Engineering, Florida International University, Miami, FL 33199, USA
- Department of Rehabilitation Medicine - Division of Physical Therapy, Emory University, Atlanta, GA 30322, USA
- W.H. Coulter Department of Biomedical Engineering, Emory University Atlanta, GA 30322, USA
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9
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Medrano J, Friston K, Zeidman P. Linking fast and slow: The case for generative models. Netw Neurosci 2024; 8:24-43. [PMID: 38562283 PMCID: PMC10861163 DOI: 10.1162/netn_a_00343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 10/11/2023] [Indexed: 04/04/2024] Open
Abstract
A pervasive challenge in neuroscience is testing whether neuronal connectivity changes over time due to specific causes, such as stimuli, events, or clinical interventions. Recent hardware innovations and falling data storage costs enable longer, more naturalistic neuronal recordings. The implicit opportunity for understanding the self-organised brain calls for new analysis methods that link temporal scales: from the order of milliseconds over which neuronal dynamics evolve, to the order of minutes, days, or even years over which experimental observations unfold. This review article demonstrates how hierarchical generative models and Bayesian inference help to characterise neuronal activity across different time scales. Crucially, these methods go beyond describing statistical associations among observations and enable inference about underlying mechanisms. We offer an overview of fundamental concepts in state-space modeling and suggest a taxonomy for these methods. Additionally, we introduce key mathematical principles that underscore a separation of temporal scales, such as the slaving principle, and review Bayesian methods that are being used to test hypotheses about the brain with multiscale data. We hope that this review will serve as a useful primer for experimental and computational neuroscientists on the state of the art and current directions of travel in the complex systems modelling literature.
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Affiliation(s)
- Johan Medrano
- The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, UK
| | - Karl Friston
- The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, UK
| | - Peter Zeidman
- The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London, UK
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10
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Churchland MM, Shenoy KV. Preparatory activity and the expansive null-space. Nat Rev Neurosci 2024; 25:213-236. [PMID: 38443626 DOI: 10.1038/s41583-024-00796-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/26/2024] [Indexed: 03/07/2024]
Abstract
The study of the cortical control of movement experienced a conceptual shift over recent decades, as the basic currency of understanding shifted from single-neuron tuning towards population-level factors and their dynamics. This transition was informed by a maturing understanding of recurrent networks, where mechanism is often characterized in terms of population-level factors. By estimating factors from data, experimenters could test network-inspired hypotheses. Central to such hypotheses are 'output-null' factors that do not directly drive motor outputs yet are essential to the overall computation. In this Review, we highlight how the hypothesis of output-null factors was motivated by the venerable observation that motor-cortex neurons are active during movement preparation, well before movement begins. We discuss how output-null factors then became similarly central to understanding neural activity during movement. We discuss how this conceptual framework provided key analysis tools, making it possible for experimenters to address long-standing questions regarding motor control. We highlight an intriguing trend: as experimental and theoretical discoveries accumulate, the range of computational roles hypothesized to be subserved by output-null factors continues to expand.
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Affiliation(s)
- Mark M Churchland
- Department of Neuroscience, Columbia University, New York, NY, USA.
- Grossman Center for the Statistics of Mind, Columbia University, New York, NY, USA.
- Kavli Institute for Brain Science, Columbia University, New York, NY, USA.
| | - Krishna V Shenoy
- Department of Electrical Engineering, Stanford University, Stanford, CA, USA
- Department of Bioengineering, Stanford University, Stanford, CA, USA
- Department of Neurobiology, Stanford University, Stanford, CA, USA
- Department of Neurosurgery, Stanford University, Stanford, CA, USA
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA
- Bio-X Institute, Stanford University, Stanford, CA, USA
- Howard Hughes Medical Institute at Stanford University, Stanford, CA, USA
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11
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Kuzmina E, Kriukov D, Lebedev M. Neuronal travelling waves explain rotational dynamics in experimental datasets and modelling. Sci Rep 2024; 14:3566. [PMID: 38347042 PMCID: PMC10861525 DOI: 10.1038/s41598-024-53907-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 02/06/2024] [Indexed: 02/15/2024] Open
Abstract
Spatiotemporal properties of neuronal population activity in cortical motor areas have been subjects of experimental and theoretical investigations, generating numerous interpretations regarding mechanisms for preparing and executing limb movements. Two competing models, representational and dynamical, strive to explain the relationship between movement parameters and neuronal activity. A dynamical model uses the jPCA method that holistically characterizes oscillatory activity in neuron populations by maximizing the data rotational dynamics. Different rotational dynamics interpretations revealed by the jPCA approach have been proposed. Yet, the nature of such dynamics remains poorly understood. We comprehensively analyzed several neuronal-population datasets and found rotational dynamics consistently accounted for by a traveling wave pattern. For quantifying rotation strength, we developed a complex-valued measure, the gyration number. Additionally, we identified parameters influencing rotation extent in the data. Our findings suggest that rotational dynamics and traveling waves are typically the same phenomena, so reevaluation of the previous interpretations where they were considered separate entities is needed.
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Affiliation(s)
- Ekaterina Kuzmina
- Skolkovo Institute of Science and Technology, Vladimir Zelman Center for Neurobiology and Brain Rehabilitation, Moscow, Russia, 121205.
- Artificial Intelligence Research Institute (AIRI), Moscow, Russia.
| | - Dmitrii Kriukov
- Artificial Intelligence Research Institute (AIRI), Moscow, Russia
- Skolkovo Institute of Science and Technology, Center for Molecular and Cellular Biology, Moscow, Russia, 121205
| | - Mikhail Lebedev
- Faculty of Mechanics and Mathematics, Lomonosov Moscow State University, Moscow, Russia, 119992
- Sechenov Institute of Evolutionary Physiology and Biochemistry of the Russian Academy of Sciences, Saint-Petersburg, Russia, 194223
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12
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Zimnik AJ, Cora Ames K, An X, Driscoll L, Lara AH, Russo AA, Susoy V, Cunningham JP, Paninski L, Churchland MM, Glaser JI. Identifying Interpretable Latent Factors with Sparse Component Analysis. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.05.578988. [PMID: 38370650 PMCID: PMC10871230 DOI: 10.1101/2024.02.05.578988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/20/2024]
Abstract
In many neural populations, the computationally relevant signals are posited to be a set of 'latent factors' - signals shared across many individual neurons. Understanding the relationship between neural activity and behavior requires the identification of factors that reflect distinct computational roles. Methods for identifying such factors typically require supervision, which can be suboptimal if one is unsure how (or whether) factors can be grouped into distinct, meaningful sets. Here, we introduce Sparse Component Analysis (SCA), an unsupervised method that identifies interpretable latent factors. SCA seeks factors that are sparse in time and occupy orthogonal dimensions. With these simple constraints, SCA facilitates surprisingly clear parcellations of neural activity across a range of behaviors. We applied SCA to motor cortex activity from reaching and cycling monkeys, single-trial imaging data from C. elegans, and activity from a multitask artificial network. SCA consistently identified sets of factors that were useful in describing network computations.
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Affiliation(s)
- Andrew J Zimnik
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA
- Zuckerman Institute, Columbia University, New York, NY, USA
| | - K Cora Ames
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA
- Zuckerman Institute, Columbia University, New York, NY, USA
- Grossman Center for the Statistics of Mind, Columbia University, New York, NY, USA
- Center for Theoretical Neuroscience, Columbia University, New York, NY, USA
| | - Xinyue An
- Department of Neurology, Northwestern University, Chicago, IL, USA
- Interdepartmental Neuroscience Program, Northwestern University, Chicago, IL, USA
| | - Laura Driscoll
- Department of Electrical Engineering, Stanford University, Stanford, CA, USA
- Allen Institute for Neural Dynamics, Allen Institute, Seattle, CA, USA
| | - Antonio H Lara
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA
- Zuckerman Institute, Columbia University, New York, NY, USA
| | - Abigail A Russo
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA
- Zuckerman Institute, Columbia University, New York, NY, USA
| | - Vladislav Susoy
- Department of Physics, Harvard University, Cambridge, MA, USA
- Center for Brain Science, Harvard University, Cambridge, MA, USA
| | - John P Cunningham
- Zuckerman Institute, Columbia University, New York, NY, USA
- Grossman Center for the Statistics of Mind, Columbia University, New York, NY, USA
- Center for Theoretical Neuroscience, Columbia University, New York, NY, USA
- Department of Statistics, Columbia University, New York, NY, USA
| | - Liam Paninski
- Zuckerman Institute, Columbia University, New York, NY, USA
- Grossman Center for the Statistics of Mind, Columbia University, New York, NY, USA
- Center for Theoretical Neuroscience, Columbia University, New York, NY, USA
- Department of Statistics, Columbia University, New York, NY, USA
| | - Mark M Churchland
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA
- Zuckerman Institute, Columbia University, New York, NY, USA
- Grossman Center for the Statistics of Mind, Columbia University, New York, NY, USA
- Kavli Institute for Brain Science, Columbia University Medical Center, New York, NY, USA
| | - Joshua I Glaser
- Department of Neurology, Northwestern University, Chicago, IL, USA
- Department of Computer Science, Northwestern University, Evanston, IL, USA
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13
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Hatsopoulos N, Moore D, MacLean J, Walker J. A dynamic subset of network interactions underlies tuning to natural movements in marmoset sensorimotor cortex. RESEARCH SQUARE 2023:rs.3.rs-3750312. [PMID: 38234779 PMCID: PMC10793486 DOI: 10.21203/rs.3.rs-3750312/v1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/19/2024]
Abstract
Mechanisms of computation in sensorimotor cortex must be flexible and robust to support skilled motor behavior. Patterns of neuronal coactivity emerge as a result of computational processes. Pairwise spike-time statistical relationships, across the population, can be summarized as a functional network (FN) which retains single-unit properties. We record populations of single-unit neural activity in forelimb sensorimotor cortex during prey-capture and spontaneous behavior and use an encoding model incorporating kinematic trajectories and network features to predict single-unit activity during forelimb movements. The contribution of network features depends on structured connectivity within strongly connected functional groups. We identify a context-specific functional group that is highly tuned to kinematics and reorganizes its connectivity between spontaneous and prey-capture movements. In the remaining context-invariant group, interactions are comparatively stable across behaviors and units are less tuned to kinematics. This suggests different roles in producing natural forelimb movements and contextualizes single-unit tuning properties within population dynamics.
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14
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Bufacchi RJ, Battaglia-Mayer A, Iannetti GD, Caminiti R. Cortico-spinal modularity in the parieto-frontal system: A new perspective on action control. Prog Neurobiol 2023; 231:102537. [PMID: 37832714 DOI: 10.1016/j.pneurobio.2023.102537] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2023] [Revised: 08/22/2023] [Accepted: 10/04/2023] [Indexed: 10/15/2023]
Abstract
Classical neurophysiology suggests that the motor cortex (MI) has a unique role in action control. In contrast, this review presents evidence for multiple parieto-frontal spinal command modules that can bypass MI. Five observations support this modular perspective: (i) the statistics of cortical connectivity demonstrate functionally-related clusters of cortical areas, defining functional modules in the premotor, cingulate, and parietal cortices; (ii) different corticospinal pathways originate from the above areas, each with a distinct range of conduction velocities; (iii) the activation time of each module varies depending on task, and different modules can be activated simultaneously; (iv) a modular architecture with direct motor output is faster and less metabolically expensive than an architecture that relies on MI, given the slow connections between MI and other cortical areas; (v) lesions of the areas composing parieto-frontal modules have different effects from lesions of MI. Here we provide examples of six cortico-spinal modules and functions they subserve: module 1) arm reaching, tool use and object construction; module 2) spatial navigation and locomotion; module 3) grasping and observation of hand and mouth actions; module 4) action initiation, motor sequences, time encoding; module 5) conditional motor association and learning, action plan switching and action inhibition; module 6) planning defensive actions. These modules can serve as a library of tools to be recombined when faced with novel tasks, and MI might serve as a recombinatory hub. In conclusion, the availability of locally-stored information and multiple outflow paths supports the physiological plausibility of the proposed modular perspective.
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Affiliation(s)
- R J Bufacchi
- Neuroscience and Behaviour Laboratory, Istituto Italiano di Tecnologia, Rome, Italy; International Center for Primate Brain Research (ICPBR), Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), Chinese Academy of Sciences (CAS), Shanghai, China
| | - A Battaglia-Mayer
- Department of Physiology and Pharmacology, University of Rome, Sapienza, Italy
| | - G D Iannetti
- Neuroscience and Behaviour Laboratory, Istituto Italiano di Tecnologia, Rome, Italy; Department of Neuroscience, Physiology and Pharmacology, University College London (UCL), London, UK
| | - R Caminiti
- Neuroscience and Behaviour Laboratory, Istituto Italiano di Tecnologia, Rome, Italy.
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15
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Verhein JR, Vyas S, Shenoy KV. Methylphenidate modulates motor cortical dynamics and behavior. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.15.562405. [PMID: 37905157 PMCID: PMC10614820 DOI: 10.1101/2023.10.15.562405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/02/2023]
Abstract
Methylphenidate (MPH, brand: Ritalin) is a common stimulant used both medically and non-medically. Though typically prescribed for its cognitive effects, MPH also affects movement. While it is known that MPH noncompetitively blocks the reuptake of catecholamines through inhibition of dopamine and norepinephrine transporters, a critical step in exploring how it affects behavior is to understand how MPH directly affects neural activity. This would establish an electrophysiological mechanism of action for MPH. Since we now have biologically-grounded network-level hypotheses regarding how populations of motor cortical neurons plan and execute movements, there is a unique opportunity to make testable predictions regarding how systemic MPH administration - a pharmacological perturbation - might affect neural activity in motor cortex. To that end, we administered clinically-relevant doses of MPH to Rhesus monkeys as they performed an instructed-delay reaching task. Concomitantly, we measured neural activity from dorsal premotor and primary motor cortex. Consistent with our predictions, we found dose-dependent and significant effects on reaction time, trial-by-trial variability, and movement speed. We confirmed our hypotheses that changes in reaction time and variability were accompanied by previously established population-level changes in motor cortical preparatory activity and the condition-independent signal that precedes movements. We expected changes in speed to be a result of changes in the amplitude of motor cortical dynamics and/or a translation of those dynamics in activity space. Instead, our data are consistent with a mechanism whereby the neuromodulatory effect of MPH is to increase the gain and/or the signal-to-noise of motor cortical dynamics during reaching. Continued work in this domain to better understand the brain-wide electrophysiological mechanism of action of MPH and other psychoactive drugs could facilitate more targeted treatments for a host of cognitive-motor disorders.
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Affiliation(s)
- Jessica R Verhein
- Medical Scientist Training Program, Stanford School of Medicine, Stanford University, Stanford, CA
- Neurosciences Graduate Program, Stanford School of Medicine, Stanford University, Stanford, CA
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA
- Current affiliations: Psychiatry Research Residency Training Program, University of California, San Francisco, San Francisco, CA
| | - Saurabh Vyas
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA
- Department of Bioengineering, Stanford University, Stanford, CA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY
| | - Krishna V Shenoy
- Neurosciences Graduate Program, Stanford School of Medicine, Stanford University, Stanford, CA
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA
- Department of Bioengineering, Stanford University, Stanford, CA
- Department of Electrical Engineering, Stanford University, Stanford, CA
- Howard Hughes Medical Institute at Stanford University, Stanford, CA
- Department of Neurobiology, Stanford University, Stanford, CA
- Bio-X Program, Stanford University, Stanford, CA
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16
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Ayar EC, Heusser MR, Bourrelly C, Gandhi NJ. Distinct context- and content-dependent population codes in superior colliculus during sensation and action. Proc Natl Acad Sci U S A 2023; 120:e2303523120. [PMID: 37748075 PMCID: PMC10556644 DOI: 10.1073/pnas.2303523120] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2023] [Accepted: 08/23/2023] [Indexed: 09/27/2023] Open
Abstract
Sensorimotor transformation is the process of first sensing an object in the environment and then producing a movement in response to that stimulus. For visually guided saccades, neurons in the superior colliculus (SC) emit a burst of spikes to register the appearance of stimulus, and many of the same neurons discharge another burst to initiate the eye movement. We investigated whether the neural signatures of sensation and action in SC depend on context. Spiking activity along the dorsoventral axis was recorded with a laminar probe as Rhesus monkeys generated saccades to the same stimulus location in tasks that require either executive control to delay saccade onset until permission is granted or the production of an immediate response to a target whose onset is predictable. Using dimensionality reduction and discriminability methods, we show that the subspaces occupied during the visual and motor epochs were both distinct within each task and differentiable across tasks. Single-unit analyses, in contrast, show that the movement-related activity of SC neurons was not different between tasks. These results demonstrate that statistical features in neural activity of simultaneously recorded ensembles provide more insight than single neurons. They also indicate that cognitive processes associated with task requirements are multiplexed in SC population activity during both sensation and action and that downstream structures could use this activity to extract context. Additionally, the entire manifolds associated with sensory and motor responses, respectively, may be larger than the subspaces explored within a certain set of experiments.
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Affiliation(s)
- Eve C. Ayar
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA15213
- Program in Neural Computation, Carnegie Mellon University, Pittsburgh, PA15213
- Center for Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA15213
| | - Michelle R. Heusser
- Center for Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA15213
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA15213
| | - Clara Bourrelly
- Center for Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA15213
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA15213
| | - Neeraj J. Gandhi
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA15213
- Program in Neural Computation, Carnegie Mellon University, Pittsburgh, PA15213
- Center for Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA15213
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA15213
- Center for Neuroscience, University of Pittsburgh, Pittsburgh, PA15213
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17
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Engelhardt M, Kern G, Karhu J, Picht T. Protocol for mapping of the supplementary motor area using repetitive navigated transcranial magnetic stimulation. Front Neurosci 2023; 17:1185483. [PMID: 37332876 PMCID: PMC10272366 DOI: 10.3389/fnins.2023.1185483] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Accepted: 05/19/2023] [Indexed: 06/20/2023] Open
Abstract
Background Damage to the supplementary motor area (SMA) can lead to impairments of motor and language function. A detailed preoperative mapping of functional boarders of the SMA could therefore aid preoperative diagnostics in these patients. Objective The aim of this study was the development of a repetitive nTMS protocol for non-invasive functional mapping of the SMA while assuring effects are caused by SMA rather than M1 activation. Methods The SMA in the dominant hemisphere of 12 healthy subjects (28.2 ± 7.7 years, 6 females) was mapped using repetitive nTMS at 20 Hz (120% RMT), while subjects performed a finger tapping task. Reductions in finger taps were classified in three error categories (≤15% = no errors, 15-30% = mild, >30% significant). The location and category of induced errors was marked in each subject's individual MRI. Effects of SMA stimulation were then directly compared to effects of M1 stimulation in four different tasks (finger tapping, writing, line tracing, targeting circles). Results Mapping of the SMA was possible for all subjects, yet effect sizes varied. Stimulation of the SMA led to a significant reduction of finger taps compared to baseline (BL: 45taps, SMA: 35.5taps; p < 0.01). Line tracing, writing and targeting of circles was less accurate during SMA compared to M1 stimulation. Conclusion Mapping of the SMA using repetitive nTMS is feasible. While errors induced in the SMA are not entirely independent of M1, disruption of the SMA induces functionally distinct errors. These error maps can aid preoperative diagnostics in patients with SMA related lesions.
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Affiliation(s)
- Melina Engelhardt
- Department of Neurosurgery, Charité – Universitätsmedizin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany
- Einstein Center for Neurosciences, Charité – Universitätsmedizin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany
- International Graduate Program Medical Neurosciences, Charité – Universitätsmedizin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany
| | - Giulia Kern
- Department of Neurosurgery, Charité – Universitätsmedizin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany
| | - Jari Karhu
- Department of Physiology, University of Eastern Finland, Kuopio, Finland
| | - Thomas Picht
- Department of Neurosurgery, Charité – Universitätsmedizin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany
- Einstein Center for Neurosciences, Charité – Universitätsmedizin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany
- Cluster of Excellence Matters of Activity, Image Space Material, Humboldt-Universität zu Berlin, Berlin, Germany
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18
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DePasquale B, Sussillo D, Abbott LF, Churchland MM. The centrality of population-level factors to network computation is demonstrated by a versatile approach for training spiking networks. Neuron 2023; 111:631-649.e10. [PMID: 36630961 PMCID: PMC10118067 DOI: 10.1016/j.neuron.2022.12.007] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 06/17/2022] [Accepted: 12/05/2022] [Indexed: 01/12/2023]
Abstract
Neural activity is often described in terms of population-level factors extracted from the responses of many neurons. Factors provide a lower-dimensional description with the aim of shedding light on network computations. Yet, mechanistically, computations are performed not by continuously valued factors but by interactions among neurons that spike discretely and variably. Models provide a means of bridging these levels of description. We developed a general method for training model networks of spiking neurons by leveraging factors extracted from either data or firing-rate-based networks. In addition to providing a useful model-building framework, this formalism illustrates how reliable and continuously valued factors can arise from seemingly stochastic spiking. Our framework establishes procedures for embedding this property in network models with different levels of realism. The relationship between spikes and factors in such networks provides a foundation for interpreting (and subtly redefining) commonly used quantities such as firing rates.
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Affiliation(s)
- Brian DePasquale
- Princeton Neuroscience Institute, Princeton University, Princeton NJ, USA; Department of Neuroscience, Columbia University, New York, NY, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY, USA.
| | - David Sussillo
- Department of Electrical Engineering, Stanford University, Stanford, CA, USA; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA
| | - L F Abbott
- Department of Neuroscience, Columbia University, New York, NY, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY, USA; Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA; Department of Physiology and Cellular Biophysics, Columbia University, New York, NY, USA; Kavli Institute for Brain Science, Columbia University, New York, NY, USA
| | - Mark M Churchland
- Department of Neuroscience, Columbia University, New York, NY, USA; Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA; Kavli Institute for Brain Science, Columbia University, New York, NY, USA; Grossman Center for the Statistics of Mind, Columbia University, New York, NY, USA
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19
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Mahmood A, Steindler J, Germaine H, Miller P, Katz DB. Coupled Dynamics of Stimulus-Evoked Gustatory Cortical and Basolateral Amygdalar Activity. J Neurosci 2023; 43:386-404. [PMID: 36443002 PMCID: PMC9864615 DOI: 10.1523/jneurosci.1412-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Revised: 11/12/2022] [Accepted: 11/15/2022] [Indexed: 11/29/2022] Open
Abstract
Gustatory cortical (GC) single-neuron taste responses reflect taste quality and palatability in successive epochs. Ensemble analyses reveal epoch-to-epoch firing-rate changes in these responses to be sudden, coherent transitions. Such nonlinear dynamics suggest that GC is part of a recurrent network, producing these dynamics in concert with other structures. Basolateral amygdala (BLA), which is reciprocally connected to GC and central to hedonic processing, is a strong candidate partner for GC, in that BLA taste responses evolve on the same general clock as GC and because inhibition of activity in the BLA→GC pathway degrades the sharpness of GC transitions. These facts motivate, but do not test, our overarching hypothesis that BLA and GC act as a single, comodulated network during taste processing. Here, we provide just this test of simultaneous (BLA and GC) extracellular taste responses in female rats, probing the multiregional dynamics of activity to directly test whether BLA and GC responses contain coupled dynamics. We show that BLA and GC response magnitudes covary across trials and within single responses, and that changes in BLA-GC local field potential phase coherence are epoch specific. Such classic coherence analyses, however, obscure the most salient facet of BLA-GC coupling: sudden transitions in and out of the epoch known to be involved in driving gaping behavior happen near simultaneously in the two regions, despite huge trial-to-trial variability in transition latencies. This novel form of inter-regional coupling, which we show is easily replicated in model networks, suggests collective processing in a distributed neural network.SIGNIFICANCE STATEMENT There has been little investigation into real-time communication between brain regions during taste processing, a fact reflecting the dominant belief that taste circuitry is largely feedforward. Here, we perform an in-depth analysis of real-time interactions between GC and BLA in response to passive taste deliveries, using both conventional coherence metrics and a novel methodology that explicitly considers trial-to-trial variability and fast single-trial dynamics in evoked responses. Our results demonstrate that BLA-GC coherence changes as the taste response unfolds, and that BLA and GC specifically couple for the sudden transition into (and out of) the behaviorally relevant neural response epoch, suggesting (although not proving) that: (1) recurrent interactions subserve the function of the dyad as (2) a putative attractor network.
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Affiliation(s)
- Abuzar Mahmood
- Graduate Program in Neuroscience, Brandeis University, Waltham, Massachusetts 02453
| | | | - Hannah Germaine
- Graduate Program in Neuroscience, Brandeis University, Waltham, Massachusetts 02453
| | - Paul Miller
- Graduate Program in Neuroscience, Brandeis University, Waltham, Massachusetts 02453
- Biology, Brandeis University, Waltham, Massachusetts 02453
- Volen Center for Complex Systems, Brandeis University, Waltham, Massachusetts 02453
| | - Donald B Katz
- Graduate Program in Neuroscience, Brandeis University, Waltham, Massachusetts 02453
- Departments of Psychology
- Volen Center for Complex Systems, Brandeis University, Waltham, Massachusetts 02453
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20
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Varley TF, Sporns O, Schaffelhofer S, Scherberger H, Dann B. Information-processing dynamics in neural networks of macaque cerebral cortex reflect cognitive state and behavior. Proc Natl Acad Sci U S A 2023; 120:e2207677120. [PMID: 36603032 PMCID: PMC9926243 DOI: 10.1073/pnas.2207677120] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 11/29/2022] [Indexed: 01/06/2023] Open
Abstract
One of the essential functions of biological neural networks is the processing of information. This includes everything from processing sensory information to perceive the environment, up to processing motor information to interact with the environment. Due to methodological limitations, it has been historically unclear how information processing changes during different cognitive or behavioral states and to what extent information is processed within or between the network of neurons in different brain areas. In this study, we leverage recent advances in the calculation of information dynamics to explore neural-level processing within and between the frontoparietal areas AIP, F5, and M1 during a delayed grasping task performed by three macaque monkeys. While information processing was high within all areas during all cognitive and behavioral states of the task, interareal processing varied widely: During visuomotor transformation, AIP and F5 formed a reciprocally connected processing unit, while no processing was present between areas during the memory period. Movement execution was processed globally across all areas with predominance of processing in the feedback direction. Furthermore, the fine-scale network structure reconfigured at the neuron level in response to different grasping conditions, despite no differences in the overall amount of information present. These results suggest that areas dynamically form higher-order processing units according to the cognitive or behavioral demand and that the information-processing network is hierarchically organized at the neuron level, with the coarse network structure determining the behavioral state and finer changes reflecting different conditions.
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Affiliation(s)
- Thomas F. Varley
- Department of Psychological & Brain Sciences, Indiana University47405-7007, Bloomington, IN
- School of Informatics, Computing, and Engineering, Indiana University47405-7007, Bloomington, IN
| | - Olaf Sporns
- Department of Psychological & Brain Sciences, Indiana University47405-7007, Bloomington, IN
| | - Stefan Schaffelhofer
- Neurobiology Laboratory, German Primate Center37077, Goettingen, Germany
- Faculty of Biology and Psychology, University of Goettingen37073, Goettingen, Germany
| | - Hansjörg Scherberger
- Neurobiology Laboratory, German Primate Center37077, Goettingen, Germany
- Faculty of Biology and Psychology, University of Goettingen37073, Goettingen, Germany
| | - Benjamin Dann
- Neurobiology Laboratory, German Primate Center37077, Goettingen, Germany
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21
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Transition of distinct context-dependent ensembles from secondary to primary motor cortex in skilled motor performance. Cell Rep 2022; 41:111494. [DOI: 10.1016/j.celrep.2022.111494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Revised: 06/27/2022] [Accepted: 09/21/2022] [Indexed: 11/19/2022] Open
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22
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Awasthi P, Lin TH, Bae J, Miller LE, Danziger ZC. Validation of a non-invasive, real-time, human-in-the-loop model of intracortical brain-computer interfaces. J Neural Eng 2022; 19:056038. [PMID: 36198278 PMCID: PMC9855658 DOI: 10.1088/1741-2552/ac97c3] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Accepted: 10/05/2022] [Indexed: 01/26/2023]
Abstract
Objective. Despite the tremendous promise of invasive brain-computer interfaces (iBCIs), the associated study costs, risks, and ethical considerations limit the opportunity to develop and test the algorithms that decode neural activity into a user's intentions. Our goal was to address this challenge by designing an iBCI model capable of testing many human subjects in closed-loop.Approach. We developed an iBCI model that uses artificial neural networks (ANNs) to translate human finger movements into realistic motor cortex firing patterns, which can then be decoded in real time. We call the model the joint angle BCI, or jaBCI. jaBCI allows readily recruited, healthy subjects to perform closed-loop iBCI tasks using any neural decoder, preserving subjects' control-relevant short-latency error correction and learning dynamics.Main results. We validated jaBCI offline through emulated neuron firing statistics, confirming that emulated neural signals have firing rates, low-dimensional PCA geometry, and rotational jPCA dynamics that are quite similar to the actual neurons (recorded in monkey M1) on which we trained the ANN. We also tested jaBCI in closed-loop experiments, our single study examining roughly as many subjects as have been tested world-wide with iBCIs (n= 25). Performance was consistent with that of the paralyzed, human iBCI users with implanted intracortical electrodes. jaBCI allowed us to imitate the experimental protocols (e.g. the same velocity Kalman filter decoder and center-out task) and compute the same seven behavioral measures used in three critical studies.Significance. These encouraging results suggest the jaBCI's real-time firing rate emulation is a useful means to provide statistically robust sample sizes for rapid prototyping and optimization of decoding algorithms, the study of bi-directional learning in iBCIs, and improving iBCI control.
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Affiliation(s)
- Peeyush Awasthi
- Department of Biomedical Engineering, Florida International University, Miami, FL, United States of Amercia
| | - Tzu-Hsiang Lin
- Department of Biomedical Engineering, Florida International University, Miami, FL, United States of Amercia
| | - Jihye Bae
- Department of Electrical and Computer Engineering, University of Kentucky, Lexington, KY, United States
| | - Lee E Miller
- Department of Neuroscience, Physical Medicine, and Rehabilitation, Northwestern University, Chicago, IL, United States
| | - Zachary C Danziger
- Department of Biomedical Engineering, Florida International University, Miami, FL, United States of Amercia,Author to whom any correspondence should be addressed
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23
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Pani P, Giamundo M, Giarrocco F, Mione V, Fontana R, Brunamonti E, Mattia M, Ferraina S. Neuronal population dynamics during motor plan cancellation in nonhuman primates. Proc Natl Acad Sci U S A 2022; 119:e2122395119. [PMID: 35867763 PMCID: PMC9282441 DOI: 10.1073/pnas.2122395119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 05/09/2022] [Indexed: 01/11/2023] Open
Abstract
To understand the cortical neuronal dynamics behind movement generation and control, most studies have focused on tasks where actions were planned and then executed using different instances of visuomotor transformations. However, to fully understand the dynamics related to movement control, one must also study how movements are actively inhibited. Inhibition, indeed, represents the first level of control both when different alternatives are available and only one solution could be adopted and when it is necessary to maintain the current position. We recorded neuronal activity from a multielectrode array in the dorsal premotor cortex (PMd) of monkeys performing a countermanding reaching task that requires, in a subset of trials, them to cancel a planned movement before its onset. In the analysis of the neuronal state space of PMd, we found a subspace in which activities conveying temporal information were confined during active inhibition and position holding. Movement execution required activities to escape from this subspace toward an orthogonal subspace and, furthermore, surpass a threshold associated with the maturation of the motor plan. These results revealed further details in the neuronal dynamics underlying movement control, extending the hypothesis that neuronal computation confined in an "output-null" subspace does not produce movements.
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Affiliation(s)
- Pierpaolo Pani
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
| | - Margherita Giamundo
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
| | - Franco Giarrocco
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
| | - Valentina Mione
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
| | - Roberto Fontana
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
| | - Emiliano Brunamonti
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
| | - Maurizio Mattia
- National Center for Radiation Protection and Computational Physics, Istituto Superiore di Sanità, 00169 Rome, Italy
| | - Stefano Ferraina
- Department of Physiology and Pharmacology, Sapienza University, 00185 Rome, Italy
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24
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Schneider A, Zimmermann C, Alyahyay M, Steenbergen F, Brox T, Diester I. 3D pose estimation enables virtual head fixation in freely moving rats. Neuron 2022; 110:2080-2093.e10. [DOI: 10.1016/j.neuron.2022.04.019] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 01/13/2022] [Accepted: 04/18/2022] [Indexed: 10/18/2022]
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25
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Buck LE, Chakraborty S, Bodenheimer B. The Impact of Embodiment and Avatar Sizing on Personal Space in Immersive Virtual Environments. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS 2022; 28:2102-2113. [PMID: 35167460 DOI: 10.1109/tvcg.2022.3150483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
In this paper, we examine how embodiment and manipulation of a self-avatar's dimensions - specifically the arm length - affect users' judgments of the personal space around them in an immersive virtual environment. In the real world, personal space is the immediate space around the body in which physical interactions are possible. Personal space is increasingly studied in virtual environments because of its importance to social interactions. Here, we specifically look at two components of personal space, interpersonal and peripersonal space, and how they are affected by embodiment and the sizing of a self-avatar. We manipulated embodiment, hypothesizing that higher levels of embodiment will result in larger measures of interpersonal space and smaller measures of peripersonal space. Likewise, we manipulated the arm length of a self-avatar, hypothesizing that while interpersonal space would change with changing arm length, peripersonal space would not. We found that the representation of both interpersonal and peripersonal space change when the user experiences differing levels of embodiment in accordance with our hypotheses, and that only interpersonal space was sensitive to changes in the dimensions of a self-avatar's arms. These findings provide increased understanding of the role of embodiment and self-avatars in the regulation of personal space, and provide foundations for improved design of social interaction in virtual environments.
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26
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Wang T, Chen Y, Cui H. From Parametric Representation to Dynamical System: Shifting Views of the Motor Cortex in Motor Control. Neurosci Bull 2022; 38:796-808. [PMID: 35298779 PMCID: PMC9276910 DOI: 10.1007/s12264-022-00832-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2021] [Accepted: 11/29/2021] [Indexed: 11/01/2022] Open
Abstract
In contrast to traditional representational perspectives in which the motor cortex is involved in motor control via neuronal preference for kinetics and kinematics, a dynamical system perspective emerging in the last decade views the motor cortex as a dynamical machine that generates motor commands by autonomous temporal evolution. In this review, we first look back at the history of the representational and dynamical perspectives and discuss their explanatory power and controversy from both empirical and computational points of view. Here, we aim to reconcile the above perspectives, and evaluate their theoretical impact, future direction, and potential applications in brain-machine interfaces.
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Affiliation(s)
- Tianwei Wang
- Center for Excellence in Brain Science and Intelligent Technology, Institute of Neuroscience, Chinese Academy of Sciences, Shanghai, 200031, China.,Shanghai Center for Brain and Brain-inspired Intelligence Technology, Shanghai, 200031, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yun Chen
- Center for Excellence in Brain Science and Intelligent Technology, Institute of Neuroscience, Chinese Academy of Sciences, Shanghai, 200031, China.,Shanghai Center for Brain and Brain-inspired Intelligence Technology, Shanghai, 200031, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - He Cui
- Center for Excellence in Brain Science and Intelligent Technology, Institute of Neuroscience, Chinese Academy of Sciences, Shanghai, 200031, China. .,Shanghai Center for Brain and Brain-inspired Intelligence Technology, Shanghai, 200031, China. .,University of Chinese Academy of Sciences, Beijing, 100049, China.
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27
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Going beyond primary motor cortex to improve brain–computer interfaces. Trends Neurosci 2022; 45:176-183. [DOI: 10.1016/j.tins.2021.12.006] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 12/01/2021] [Accepted: 12/19/2021] [Indexed: 01/08/2023]
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28
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Abstract
Investigating how an artificial network of neurons controls a simulated arm suggests that rotational patterns of activity in the motor cortex may rely on sensory feedback from the moving limb.
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Affiliation(s)
- Omid G Sani
- Ming Hsieh Department of Electrical and Computer Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, United States
| | - Maryam M Shanechi
- Ming Hsieh Department of Electrical and Computer Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, United States.,Department of Biomedical Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, United States.,Neuroscience Graduate Program, University of Southern California, Los Angeles, United States
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29
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Zanini A, Patané I, Blini E, Salemme R, Koun E, Farnè A, Brozzoli C. Peripersonal and reaching space differ: Evidence from their spatial extent and multisensory facilitation pattern. Psychon Bull Rev 2021; 28:1894-1905. [PMID: 34159525 PMCID: PMC8642341 DOI: 10.3758/s13423-021-01942-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/01/2021] [Indexed: 12/31/2022]
Abstract
Peripersonal space (PPS) is a multisensory representation of the space near body parts facilitating interactions with the close environment. Studies on non-human and human primates agree in showing that PPS is a body part-centered representation that guides actions. Because of these characteristics, growing confusion surrounds peripersonal and arm-reaching space (ARS), that is the space one's arm can reach. Despite neuroanatomical evidence favoring their distinction, no study has contrasted directly their respective extent and behavioral features. Here, in five experiments (N = 140) we found that PPS differs from ARS, as evidenced both by participants' spatial and temporal performance and by its modeling. We mapped PPS and ARS using both their respective gold standard tasks and a novel multisensory facilitation paradigm. Results show that: (1) PPS is smaller than ARS; (2) multivariate analyses of spatial patterns of multisensory facilitation predict participants' hand locations within ARS; and (3) the multisensory facilitation map shifts isomorphically following hand positions, revealing hand-centered coding of PPS, therefore pointing to a functional similarity to the receptive fields of monkeys' multisensory neurons. A control experiment further corroborated these results and additionally ruled out the orienting of attention as the driving mechanism for the increased multisensory facilitation near the hand. In sharp contrast, ARS mapping results in a larger spatial extent, with undistinguishable patterns across hand positions, cross-validating the conclusion that PPS and ARS are distinct spatial representations. These findings show a need for refinement of theoretical models of PPS, which is relevant to constructs as diverse as self-representation, social interpersonal distance, and motor control.
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Affiliation(s)
- A Zanini
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France.
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France.
| | - I Patané
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France
| | - E Blini
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France
- Department of General Psychology, University of Padova, Padova, Italy
| | - R Salemme
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France
- Hospices Civils de Lyon, Neuro-immersion - Mouvement et Handicap, Lyon, France
| | - E Koun
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France
- Hospices Civils de Lyon, Neuro-immersion - Mouvement et Handicap, Lyon, France
| | - A Farnè
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France
- Hospices Civils de Lyon, Neuro-immersion - Mouvement et Handicap, Lyon, France
- Center for Mind/Brain Sciences, University of Trento, Rovereto, Italy
| | - C Brozzoli
- ImpAct Team, Lyon Neuroscience Research Centre, INSERM U1028, CNRS UMR5292, Lyon, France.
- University Claude Bernard Lyon I, Université de Lyon, Lyon, France.
- Hospices Civils de Lyon, Neuro-immersion - Mouvement et Handicap, Lyon, France.
- Department of Neurobiology, Care Sciences and Society, Aging Research Center, Karolinska Institutet, Stockholm, Sweden.
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30
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Welniarz Q, Roze E, Béranger B, Méneret A, Vidailhet M, Lehéricy S, Pouget P, Hallett M, Meunier S, Galléa C. Identification of a Brain Network Underlying the Execution of Freely Chosen Movements. Cereb Cortex 2021; 32:216-230. [PMID: 34590113 DOI: 10.1093/cercor/bhab204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 05/30/2021] [Accepted: 06/07/2021] [Indexed: 11/14/2022] Open
Abstract
Action selection refers to the decision regarding which action to perform in order to reach a desired goal, that is, the "what" component of intention. Whether the action is freely chosen or externally instructed involves different brain networks during the selection phase, but it is assumed that the way an action is selected should not influence the subsequent execution phase of the same movement. Here, we aim to test this hypothesis by investigating whether the modality of movement selection influences the brain networks involved during the execution phase of the movement. Twenty healthy volunteers performed a delayed response task in an event-related functional magnetic resonance imaging design to compare freely chosen and instructed unimanual or bimanual movements during the execution phase. Using activation analyses, we found that the pre-supplementary motor area (preSMA) and the parietal and cerebellar areas were more activated during the execution phase of freely chosen as compared to instructed movements. Connectivity analysis showed an increase of information flow between the right posterior parietal cortex and the cerebellum for freely chosen compared to instructed movements. We suggest that the parieto-cerebellar network is particularly engaged during freely chosen movement to monitor the congruence between the intentional content of our actions and their outcome.
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Affiliation(s)
- Quentin Welniarz
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France
| | - Emmanuel Roze
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France.,Département de Neurologie, Assistance Publique - Hôpitaux de Paris, Hôpital Pitié-Salpêtrière, Paris 75013, France
| | - Benoît Béranger
- Centre de NeuroImagerie de Recherche CENIR, ICM, Paris 75013, France
| | - Aurélie Méneret
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France.,Département de Neurologie, Assistance Publique - Hôpitaux de Paris, Hôpital Pitié-Salpêtrière, Paris 75013, France
| | - Marie Vidailhet
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France.,Département de Neurologie, Assistance Publique - Hôpitaux de Paris, Hôpital Pitié-Salpêtrière, Paris 75013, France
| | - Stéphane Lehéricy
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France.,Centre de NeuroImagerie de Recherche CENIR, ICM, Paris 75013, France
| | - Pierre Pouget
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France
| | - Mark Hallett
- Human Motor Control Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda 20892, MD, USA
| | - Sabine Meunier
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France
| | - Cécile Galléa
- Faculté de Médecine, INSERM U 1127, CNRS UMR 7225, UM 75, ICM, Sorbonne Université, Paris 75013, France
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31
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Kalidindi HT, Cross KP, Lillicrap TP, Omrani M, Falotico E, Sabes PN, Scott SH. Rotational dynamics in motor cortex are consistent with a feedback controller. eLife 2021; 10:e67256. [PMID: 34730516 PMCID: PMC8691841 DOI: 10.7554/elife.67256] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Accepted: 10/28/2021] [Indexed: 11/13/2022] Open
Abstract
Recent studies have identified rotational dynamics in motor cortex (MC), which many assume arise from intrinsic connections in MC. However, behavioral and neurophysiological studies suggest that MC behaves like a feedback controller where continuous sensory feedback and interactions with other brain areas contribute substantially to MC processing. We investigated these apparently conflicting theories by building recurrent neural networks that controlled a model arm and received sensory feedback from the limb. Networks were trained to counteract perturbations to the limb and to reach toward spatial targets. Network activities and sensory feedback signals to the network exhibited rotational structure even when the recurrent connections were removed. Furthermore, neural recordings in monkeys performing similar tasks also exhibited rotational structure not only in MC but also in somatosensory cortex. Our results argue that rotational structure may also reflect dynamics throughout the voluntary motor system involved in online control of motor actions.
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Affiliation(s)
| | - Kevin P Cross
- Centre for Neuroscience Studies, Queen's UniversityKingstonCanada
| | - Timothy P Lillicrap
- Centre for Computation, Mathematics and Physics, University College LondonLondonUnited Kingdom
| | - Mohsen Omrani
- Centre for Neuroscience Studies, Queen's UniversityKingstonCanada
| | - Egidio Falotico
- The BioRobotics Institute, Scuola Superiore Sant'AnnaPisaItaly
| | - Philip N Sabes
- Department of Physiology, University of California, San FranciscoSan FranciscoUnited States
| | - Stephen H Scott
- Centre for Neuroscience Studies, Queen's UniversityKingstonCanada
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32
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Solomon JP, Kraeutner SN, O'Neil K, Boe SG. Examining the role of the supplementary motor area in motor imagery-based skill acquisition. Exp Brain Res 2021; 239:3649-3659. [PMID: 34609545 DOI: 10.1007/s00221-021-06232-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 09/21/2021] [Indexed: 11/28/2022]
Abstract
Motor imagery (MI) and physical practice (PP) have been seen as parallel processes that can drive acquisition of motor skills. Emerging evidence, however, suggests these two processes may be fundamentally different, whereby MI-based motor skill acquisition relies more on effector-independent encoding of movement relative to PP. This alternate view is supported by evidence where real and virtual lesions to brain areas involved in visuospatial processing impair MI-based skill acquisition, and via behavioural studies showing perceptual, but not motor, transfer impairs skill acquisition via MI whereas this effect is reversed in PP. This study further investigated the degree to which MI utilizes effector-independent encoding of movement by investigating the role of the supplementary motor area (SMA), an area involved in perceptual to motor transformations, in MI-based motor skill acquisition. Sixty-four participants completed a serial reaction time paradigm following assignment to one of four groups based on training modality (MI or PP) and stimulation type (sham stimulation or continuous theta burst stimulation to inhibit the SMA). Faster reaction times (RTs) to elements of a repeated sequence in comparison to randomly generated elements indicated that sequence-specific learning occurred. Learning occurred in both PP and MI, with the magnitude of learning significantly smaller in MI. Inhibitory stimulation impaired learning in both modalities. In the context of a framework that distinguishes effector-independent and -dependent components of learning, these findings indicate the SMA plays a role in developing motor chunks in both PP and MI facilitating effector-independent learning in both modalities.
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Affiliation(s)
- Jack P Solomon
- Laboratory for Brain Recovery and Function, Dalhousie University, Halifax, NS, B3H4R1, Canada.,Department of Psychology and Neuroscience, Dalhousie University, Halifax, NS, B3H4R2, Canada
| | - Sarah N Kraeutner
- Brain Behaviour Laboratory, University of British Columbia, Vancouver, BC, V6T1Z3, Canada.,Department of Physical Therapy, University of British Columbia, Vancouver, BC, V6T1Z3, Canada
| | - Kiera O'Neil
- Department of Psychology and Neuroscience, Dalhousie University, Halifax, NS, B3H4R2, Canada
| | - Shaun G Boe
- Laboratory for Brain Recovery and Function, Dalhousie University, Halifax, NS, B3H4R1, Canada. .,Department of Psychology and Neuroscience, Dalhousie University, Halifax, NS, B3H4R2, Canada. .,School of Physiotherapy, Dalhousie University, 15000, Rm 407, 4th Floor Forrest Building, 5869 University Avenue, NS, B3H 4R2, Halifax, Canada. .,School of Health and Human Performance, Dalhousie University, Halifax, NS, B3H4R2, Canada.
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33
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Meirhaeghe N, Sohn H, Jazayeri M. A precise and adaptive neural mechanism for predictive temporal processing in the frontal cortex. Neuron 2021; 109:2995-3011.e5. [PMID: 34534456 PMCID: PMC9737059 DOI: 10.1016/j.neuron.2021.08.025] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 07/02/2021] [Accepted: 08/18/2021] [Indexed: 12/14/2022]
Abstract
The theory of predictive processing posits that the brain computes expectations to process information predictively. Empirical evidence in support of this theory, however, is scarce and largely limited to sensory areas. Here, we report a precise and adaptive mechanism in the frontal cortex of non-human primates consistent with predictive processing of temporal events. We found that the speed of neural dynamics is precisely adjusted according to the average time of an expected stimulus. This speed adjustment, in turn, enables neurons to encode stimuli in terms of deviations from expectation. This lawful relationship was evident across multiple experiments and held true during learning: when temporal statistics underwent covert changes, neural responses underwent predictable changes that reflected the new mean. Together, these results highlight a precise mathematical relationship between temporal statistics in the environment and neural activity in the frontal cortex that may serve as a mechanism for predictive temporal processing.
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Affiliation(s)
- Nicolas Meirhaeghe
- Harvard-MIT Division of Health Sciences & Technology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Hansem Sohn
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Mehrdad Jazayeri
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA,Department of Brain & Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
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34
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Abstract
Significant experimental, computational, and theoretical work has identified rich structure within the coordinated activity of interconnected neural populations. An emerging challenge now is to uncover the nature of the associated computations, how they are implemented, and what role they play in driving behavior. We term this computation through neural population dynamics. If successful, this framework will reveal general motifs of neural population activity and quantitatively describe how neural population dynamics implement computations necessary for driving goal-directed behavior. Here, we start with a mathematical primer on dynamical systems theory and analytical tools necessary to apply this perspective to experimental data. Next, we highlight some recent discoveries resulting from successful application of dynamical systems. We focus on studies spanning motor control, timing, decision-making, and working memory. Finally, we briefly discuss promising recent lines of investigation and future directions for the computation through neural population dynamics framework.
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Affiliation(s)
- Saurabh Vyas
- Department of Bioengineering, Stanford University, Stanford, California 94305, USA; .,Wu Tsai Neurosciences Institute, Stanford University, Stanford, California 94305, USA
| | - Matthew D Golub
- Department of Electrical Engineering, Stanford University, Stanford, California 94305, USA.,Wu Tsai Neurosciences Institute, Stanford University, Stanford, California 94305, USA
| | - David Sussillo
- Department of Electrical Engineering, Stanford University, Stanford, California 94305, USA.,Wu Tsai Neurosciences Institute, Stanford University, Stanford, California 94305, USA.,Google AI, Google Inc., Mountain View, California 94305, USA
| | - Krishna V Shenoy
- Department of Bioengineering, Stanford University, Stanford, California 94305, USA; .,Department of Electrical Engineering, Stanford University, Stanford, California 94305, USA.,Wu Tsai Neurosciences Institute, Stanford University, Stanford, California 94305, USA.,Department of Neurobiology, Bio-X Institute, Neurosciences Program, and Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA
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35
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Neafsey EJ. Conscious intention and human action: Review of the rise and fall of the readiness potential and Libet's clock. Conscious Cogn 2021; 94:103171. [PMID: 34325185 DOI: 10.1016/j.concog.2021.103171] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 06/26/2021] [Accepted: 07/04/2021] [Indexed: 11/15/2022]
Abstract
Is consciousness-the subjective awareness of the sensations, perceptions, beliefs, desires, and intentions of mental life-a genuine cause of human action or a mere impotent epiphenomenon accompanying the brain's physical activity but utterly incapable of making anything actually happen? This article will review the history and current status of experiments and commentary related to Libet's influential paper (Brain 106:623-664, 1983) whose conclusion "that cerebral initiation even of a spontaneous voluntary act …can and usually does begin unconsciously" has had a huge effect on debate about the efficacy of conscious intentions. Early (up to 2008) and more recent (2008 on) experiments replicating and criticizing Libet's conclusions and especially his methods will be discussed, focusing especially on recent observations that the readiness potential (RP) may only be an "artifact of averaging" and that, when intention is measured using "tone probes," the onset of intention is found much earlier and often before the onset of the RP. Based on these findings, Libet's methodology was flawed and his results are no longer valid reasons for rejecting Fodor's "good old commonsense belief/desire psychology" that "my wanting is causally responsible for my reaching.".
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Affiliation(s)
- Edward J Neafsey
- Loyola University Chicago Stritch School of Medicine, Department of Molecular Pharmacology and Neuroscience, 2160 S. First Ave., Maywood, IL 60153, United States.
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36
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Logiaco L, Abbott LF, Escola S. Thalamic control of cortical dynamics in a model of flexible motor sequencing. Cell Rep 2021; 35:109090. [PMID: 34077721 PMCID: PMC8449509 DOI: 10.1016/j.celrep.2021.109090] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 03/04/2021] [Accepted: 04/16/2021] [Indexed: 12/26/2022] Open
Abstract
The neural mechanisms that generate an extensible library of motor motifs and flexibly string them into arbitrary sequences are unclear. We developed a model in which inhibitory basal ganglia output neurons project to thalamic units that are themselves bidirectionally connected to a recurrent cortical network. We model the basal ganglia inhibitory patterns as silencing some thalamic neurons while leaving others disinhibited and free to interact with cortex during specific motifs. We show that a small number of disinhibited thalamic neurons can control cortical dynamics to generate specific motor output in a noise-robust way. Additionally, a single "preparatory" thalamocortical network can produce fast cortical dynamics that support rapid transitions between any pair of learned motifs. If the thalamic units associated with each sequence component are segregated, many motor outputs can be learned without interference and then combined in arbitrary orders for the flexible production of long and complex motor sequences.
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Affiliation(s)
- Laureline Logiaco
- Zuckerman Institute, Department of Neuroscience, Columbia University, New York, NY 10027, USA; Zuckerman Institute, Department of Psychiatry, Columbia University, New York, NY 10027, USA.
| | - L F Abbott
- Zuckerman Institute, Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - Sean Escola
- Zuckerman Institute, Department of Psychiatry, Columbia University, New York, NY 10027, USA
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37
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Bogdanova OV, Bogdanov VB, Dureux A, Farnè A, Hadj-Bouziane F. The Peripersonal Space in a social world. Cortex 2021; 142:28-46. [PMID: 34174722 DOI: 10.1016/j.cortex.2021.05.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 02/27/2021] [Accepted: 05/19/2021] [Indexed: 11/27/2022]
Abstract
The PeriPersonal Space (PPS) has been defined as the space surrounding the body, where physical interactions with elements of the environment take place. As our world is social in nature, recent evidence revealed the complex modulation of social factors onto PPS representation. In light of the growing interest in the field, in this review we take a close look at the experimental approaches undertaken to assess the impact of social factors onto PPS representation. Our social world also influences the personal space (PS), a concept stemming from social psychology, defined as the space we keep between us and others to avoid discomfort. Here we analytically compare PPS and PS with the aim of understanding if and how they relate to each other. At the behavioral level, the multiplicity of experimental methodologies, whether well-established or novel, lead to somewhat divergent results and interpretations. Beyond behavior, we review physiological and neural signatures of PPS representation to discuss how interoceptive signals could contribute to PPS representation, as well as how these internal signals could shape the neural responses of PPS representation. In particular, by merging exteroceptive information from the environment and internal signals that come from the body, PPS may promote an integrated representation of the self, as distinct from the environment and the others. We put forward that integrating internal and external signals in the brain for perception of proximal environmental stimuli may also provide us with a better understanding of the processes at play during social interactions. Adopting such an integrative stance may offer novel insights about PPS representation in a social world. Finally, we discuss possible links between PPS research and social cognition, a link that may contribute to the understanding of intentions and feelings of others around us and promote appropriate social interactions.
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Affiliation(s)
- Olena V Bogdanova
- Integrative Multisensory Perception Action & Cognition Team (Impact), INSERM U1028, CNRS UMR5292, Lyon Neuroscience Research Center (CRNL), Lyon, France; University of Lyon 1, France; INCIA, UMR 5287, CNRS, Université de Bordeaux, France.
| | - Volodymyr B Bogdanov
- Integrative Multisensory Perception Action & Cognition Team (Impact), INSERM U1028, CNRS UMR5292, Lyon Neuroscience Research Center (CRNL), Lyon, France; University of Lyon 1, France; Ecole Nationale des Travaux Publics de l'Etat, Laboratoire Génie Civil et Bâtiment, Vaulx-en-Velin, France
| | - Audrey Dureux
- Integrative Multisensory Perception Action & Cognition Team (Impact), INSERM U1028, CNRS UMR5292, Lyon Neuroscience Research Center (CRNL), Lyon, France; University of Lyon 1, France
| | - Alessandro Farnè
- Integrative Multisensory Perception Action & Cognition Team (Impact), INSERM U1028, CNRS UMR5292, Lyon Neuroscience Research Center (CRNL), Lyon, France; University of Lyon 1, France; Hospices Civils de Lyon, Neuro-Immersion Platform, Lyon, France; Center for Mind/Brain Sciences (CIMeC), University of Trento, Italy
| | - Fadila Hadj-Bouziane
- Integrative Multisensory Perception Action & Cognition Team (Impact), INSERM U1028, CNRS UMR5292, Lyon Neuroscience Research Center (CRNL), Lyon, France; University of Lyon 1, France.
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38
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Morán I, Perez-Orive J, Melchor J, Figueroa T, Lemus L. Auditory decisions in the supplementary motor area. Prog Neurobiol 2021; 202:102053. [PMID: 33957182 DOI: 10.1016/j.pneurobio.2021.102053] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 04/06/2021] [Accepted: 04/20/2021] [Indexed: 10/21/2022]
Abstract
In human speech and communication across various species, recognizing and categorizing sounds is fundamental for the selection of appropriate behaviors. However, how does the brain decide which action to perform based on sounds? We explored whether the supplementary motor area (SMA), responsible for linking sensory information to motor programs, also accounts for auditory-driven decision making. To this end, we trained two rhesus monkeys to discriminate between numerous naturalistic sounds and words learned as target (T) or non-target (nT) categories. We found that the SMA at single and population neuronal levels perform decision-related computations that transition from auditory to movement representations in this task. Moreover, we demonstrated that the neural population is organized orthogonally during the auditory and the movement periods, implying that the SMA performs different computations. In conclusion, our results suggest that the SMA integrates acoustic information in order to form categorical signals that drive behavior.
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Affiliation(s)
- Isaac Morán
- Department of Cognitive Neuroscience, Institute of Cell Physiology, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, Mexico
| | - Javier Perez-Orive
- Instituto Nacional de Rehabilitacion "Luis Guillermo Ibarra Ibarra", Mexico City, Mexico
| | - Jonathan Melchor
- Department of Cognitive Neuroscience, Institute of Cell Physiology, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, Mexico
| | - Tonatiuh Figueroa
- Department of Cognitive Neuroscience, Institute of Cell Physiology, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, Mexico
| | - Luis Lemus
- Department of Cognitive Neuroscience, Institute of Cell Physiology, Universidad Nacional Autónoma de México (UNAM), 04510, Mexico City, Mexico.
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Wolf RC, Kubera KM, Waddington JL, Schmitgen MM, Fritze S, Rashidi M, Thieme CE, Sambataro F, Geiger LS, Tost H, Hirjak D. A neurodevelopmental signature of parkinsonism in schizophrenia. Schizophr Res 2021; 231:54-60. [PMID: 33770626 DOI: 10.1016/j.schres.2021.03.004] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Revised: 03/03/2021] [Accepted: 03/08/2021] [Indexed: 12/26/2022]
Abstract
While sensorimotor abnormalities in schizophrenia (SZ) are of increasing scientific interest, little is known about structural changes and their developmental origins that may underlie parkinsonism. This multimodal magnetic resonance imaging (MRI) study examined healthy controls (HC, n = 20) and SZ patients with (SZ-P, n = 38) and without (SZ-nonP, n = 35) parkinsonism, as defined by Simpson-Angus Scale total scores of ≥4 or ≤1, respectively. Using the Computational Anatomy Toolbox (CAT12), voxel- and surface-based morphometry were applied to investigate cortical and subcortical gray matter volume (GMV) and three cortical surface markers of distinct neurodevelopmental origin: cortical thickness (CTh), complexity of cortical folding (CCF) and sulcus depth. In a subgroup of patients (29 SZ-nonP, 25 SZ-P), resting-state fMRI data were also analyzed using a regions-of-interest approach based on fractional amplitude of low frequency fluctuations (fALFF). SZ-P patients showed increased CCF in the left supplementary motor cortex (SMC) and decreased left postcentral sulcus (PCS) depth compared to SZ-nonP patients (p < 0.05, FWE-corrected at cluster level). In SMC, CCF was associated negatively with activity, which also differed significantly between the patient groups and between patients and HC. In regression models, severity of parkinsonism was associated negatively with left middle frontal CCF and left anterior cingulate CTh. These data provide novel insights into altered trajectories of cortical development in SZ patients with parkinsonism. These cortical surface changes involve the sensorimotor system, suggesting abnormal neurodevelopmental processes tightly coupled with cortical activity and subcortical morphology that convey increased risk for sensorimotor abnormalities in SZ.
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Affiliation(s)
- Robert Christian Wolf
- Center for Psychosocial Medicine, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany.
| | - Katharina M Kubera
- Center for Psychosocial Medicine, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany
| | - John L Waddington
- School of Pharmacy and Biomolecular Sciences, Royal College of Surgeons in Ireland, Dublin, Ireland
| | - Mike M Schmitgen
- Center for Psychosocial Medicine, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany
| | - Stefan Fritze
- Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Mahmoud Rashidi
- Center for Psychosocial Medicine, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany; Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Cristina E Thieme
- Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Fabio Sambataro
- Department of Neuroscience (DNS), University of Padova, Padua, Italy
| | - Lena S Geiger
- Department of Psychiatry and Psychotherapy, Research Group System Neuroscience in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Germany
| | - Heike Tost
- Department of Psychiatry and Psychotherapy, Research Group System Neuroscience in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Germany
| | - Dusan Hirjak
- Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
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40
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Bondanelli G, Deneux T, Bathellier B, Ostojic S. Network dynamics underlying OFF responses in the auditory cortex. eLife 2021; 10:e53151. [PMID: 33759763 PMCID: PMC8057817 DOI: 10.7554/elife.53151] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 03/19/2021] [Indexed: 11/13/2022] Open
Abstract
Across sensory systems, complex spatio-temporal patterns of neural activity arise following the onset (ON) and offset (OFF) of stimuli. While ON responses have been widely studied, the mechanisms generating OFF responses in cortical areas have so far not been fully elucidated. We examine here the hypothesis that OFF responses are single-cell signatures of recurrent interactions at the network level. To test this hypothesis, we performed population analyses of two-photon calcium recordings in the auditory cortex of awake mice listening to auditory stimuli, and compared them to linear single-cell and network models. While the single-cell model explained some prominent features of the data, it could not capture the structure across stimuli and trials. In contrast, the network model accounted for the low-dimensional organization of population responses and their global structure across stimuli, where distinct stimuli activated mostly orthogonal dimensions in the neural state-space.
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Affiliation(s)
- Giulio Bondanelli
- Laboratoire de Neurosciences Cognitives et Computationelles, Département d’études cognitives, ENS, PSL University, INSERMParisFrance
- Neural Computation Laboratory, Center for Human Technologies, Istituto Italiano di Tecnologia (IIT)GenoaItaly
| | - Thomas Deneux
- Départment de Neurosciences Intégratives et Computationelles (ICN), Institut des Neurosciences Paris-Saclay (NeuroPSI), UMR 9197 CNRS, Université Paris SudGif-sur-YvetteFrance
| | - Brice Bathellier
- Départment de Neurosciences Intégratives et Computationelles (ICN), Institut des Neurosciences Paris-Saclay (NeuroPSI), UMR 9197 CNRS, Université Paris SudGif-sur-YvetteFrance
- Institut Pasteur, INSERM, Institut de l’AuditionParisFrance
| | - Srdjan Ostojic
- Laboratoire de Neurosciences Cognitives et Computationelles, Département d’études cognitives, ENS, PSL University, INSERMParisFrance
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41
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Zimnik AJ, Churchland MM. Independent generation of sequence elements by motor cortex. Nat Neurosci 2021; 24:412-424. [PMID: 33619403 PMCID: PMC7933118 DOI: 10.1038/s41593-021-00798-5] [Citation(s) in RCA: 58] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 01/12/2021] [Indexed: 12/20/2022]
Abstract
Rapid execution of motor sequences is believed to depend on fusing movement elements into cohesive units that are executed holistically. We sought to determine the contribution of primary motor and dorsal premotor cortex to this ability. Monkeys performed highly practiced two-reach sequences, interleaved with matched reaches performed alone or separated by a delay. We partitioned neural population activity into components pertaining to preparation, initiation and execution. The hypothesis that movement elements fuse makes specific predictions regarding all three forms of activity. We observed none of these predicted effects. Rapid two-reach sequences involved the same set of neural events as individual reaches but with preparation for the second reach occurring as the first was in flight. Thus, at the level of dorsal premotor and primary motor cortex, skillfully executing a rapid sequence depends not on fusing elements, but on the ability to perform two key processes at the same time.
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Affiliation(s)
- Andrew J Zimnik
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA
- Zuckerman Institute, Columbia University, New York, NY, USA
| | - Mark M Churchland
- Department of Neuroscience, Columbia University Medical Center, New York, NY, USA.
- Zuckerman Institute, Columbia University, New York, NY, USA.
- Kavli Institute for Brain Science, Columbia University Medical Center, New York, NY, USA.
- Grossman Center for the Statistics of Mind, Columbia University Medical Center, New York, NY, USA.
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42
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Semedo JD, Gokcen E, Machens CK, Kohn A, Yu BM. Statistical methods for dissecting interactions between brain areas. Curr Opin Neurobiol 2020; 65:59-69. [PMID: 33142111 PMCID: PMC7935404 DOI: 10.1016/j.conb.2020.09.009] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Revised: 09/23/2020] [Accepted: 09/24/2020] [Indexed: 12/12/2022]
Abstract
The brain is composed of many functionally distinct areas. This organization supports distributed processing, and requires the coordination of signals across areas. Our understanding of how populations of neurons in different areas interact with each other is still in its infancy. As the availability of recordings from large populations of neurons across multiple brain areas increases, so does the need for statistical methods that are well suited for dissecting and interrogating these recordings. Here we review multivariate statistical methods that have been, or could be, applied to this class of recordings. By leveraging population responses, these methods can provide a rich description of inter-areal interactions. At the same time, these methods can introduce interpretational challenges. We thus conclude by discussing how to interpret the outputs of these methods to further our understanding of inter-areal interactions.
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Affiliation(s)
- João D Semedo
- Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh, PA, USA.
| | - Evren Gokcen
- Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh, PA, USA.
| | - Christian K Machens
- Champalimaud Research, Champalimaud Centre for the Unknown, Lisbon, Portugal
| | - Adam Kohn
- Dominick Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY, USA; Department of Ophthalmology and Visual Sciences, Albert Einstein College of Medicine, Bronx, NY, USA; Department of Systems and Computational Biology, Albert Einstein College of Medicine, Bronx, NY, USA
| | - Byron M Yu
- Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh, PA, USA; Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA
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43
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Suresh AK, Goodman JM, Okorokova EV, Kaufman M, Hatsopoulos NG, Bensmaia SJ. Neural population dynamics in motor cortex are different for reach and grasp. eLife 2020; 9:e58848. [PMID: 33200745 PMCID: PMC7688308 DOI: 10.7554/elife.58848] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Accepted: 10/27/2020] [Indexed: 11/25/2022] Open
Abstract
Low-dimensional linear dynamics are observed in neuronal population activity in primary motor cortex (M1) when monkeys make reaching movements. This population-level behavior is consistent with a role for M1 as an autonomous pattern generator that drives muscles to give rise to movement. In the present study, we examine whether similar dynamics are also observed during grasping movements, which involve fundamentally different patterns of kinematics and muscle activations. Using a variety of analytical approaches, we show that M1 does not exhibit such dynamics during grasping movements. Rather, the grasp-related neuronal dynamics in M1 are similar to their counterparts in somatosensory cortex, whose activity is driven primarily by afferent inputs rather than by intrinsic dynamics. The basic structure of the neuronal activity underlying hand control is thus fundamentally different from that underlying arm control.
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Affiliation(s)
- Aneesha K Suresh
- Committee on Computational Neuroscience, University of ChicagoChicagoUnited States
| | - James M Goodman
- Committee on Computational Neuroscience, University of ChicagoChicagoUnited States
| | | | - Matthew Kaufman
- Committee on Computational Neuroscience, University of ChicagoChicagoUnited States
- Department of Organismal Biology and Anatomy, University of ChicagoChicagoUnited States
- Grossman Institute for Neuroscience, Quantitative Biology and Human Behavior, University of ChicagoChicagoUnited States
| | - Nicholas G Hatsopoulos
- Committee on Computational Neuroscience, University of ChicagoChicagoUnited States
- Department of Organismal Biology and Anatomy, University of ChicagoChicagoUnited States
- Grossman Institute for Neuroscience, Quantitative Biology and Human Behavior, University of ChicagoChicagoUnited States
| | - Sliman J Bensmaia
- Committee on Computational Neuroscience, University of ChicagoChicagoUnited States
- Department of Organismal Biology and Anatomy, University of ChicagoChicagoUnited States
- Grossman Institute for Neuroscience, Quantitative Biology and Human Behavior, University of ChicagoChicagoUnited States
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44
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Aoi MC, Mante V, Pillow JW. Prefrontal cortex exhibits multidimensional dynamic encoding during decision-making. Nat Neurosci 2020; 23:1410-1420. [PMID: 33020653 PMCID: PMC7610668 DOI: 10.1038/s41593-020-0696-5] [Citation(s) in RCA: 92] [Impact Index Per Article: 18.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 07/21/2020] [Indexed: 01/27/2023]
Abstract
Recent work has suggested that the prefrontal cortex (PFC) plays a key role in context-dependent perceptual decision-making. In this study, we addressed that role using a new method for identifying task-relevant dimensions of neural population activity. Specifically, we show that the PFC has a multidimensional code for context, decisions and both relevant and irrelevant sensory information. Moreover, these representations evolve in time, with an early linear accumulation phase followed by a phase with rotational dynamics. We identify the dimensions of neural activity associated with these phases and show that they do not arise from distinct populations but from a single population with broad tuning characteristics. Finally, we use model-based decoding to show that the transition from linear to rotational dynamics coincides with a plateau in decoding accuracy, revealing that rotational dynamics in the PFC preserve sensory choice information for the duration of the stimulus integration period.
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Affiliation(s)
- Mikio C Aoi
- Department of Psychology and Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
- Division of Biological Sciences & Halıcıoğlu Data Science Institute, University of California, San Diego, La Jolla, CA, USA.
| | - Valerio Mante
- Institute of Neuroinformatics and Neuroscience Center Zurich, University of Zurich and ETH Zurich, Zurich, Switzerland
| | - Jonathan W Pillow
- Department of Psychology and Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
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45
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Bizzi E, Ajemian R. From motor planning to execution: a sensorimotor loop perspective. J Neurophysiol 2020; 124:1815-1823. [PMID: 33052779 DOI: 10.1152/jn.00715.2019] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
How is an evanescent wish to move translated into a concrete action? This simple question and puzzling miracle remains a focal point of motor systems neuroscience. Where does the difficulty lie? A great deal has been known about biomechanics for quite some time. More recently, there have been significant advances in our understanding of how the spinal system is organized into modules corresponding to spinal synergies, which are fixed patterns of multimuscle recruitment. But much less is known about how the supraspinal system recruits these synergies in the correct spatiotemporal pattern to effectively control movement. We argue that what makes the problem of supraspinal control so difficult is that it emerges as a result of multiple convergent and redundant sensorimotor loops. Because these loops are convergent, multiple modes of information are mixed before being sent to the spinal system; because they are redundant, information is overlapping such that a mechanism must exist to eliminate the redundancy before the signal is sent to the spinal system. Given these complex interactions, simple correlation analyses between movement variables and neural activity are likely to render a confusing and inconsistent picture. Here, we suggest that the perspective of sensorimotor loops might help in achieving a better systems-level understanding. Furthermore, state-of-the-art techniques in neurotechnology, such as optogenetics, appear to be well suited for investigating the problem of motor control at the level of loops.
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Affiliation(s)
- Emilio Bizzi
- McGovern Institute for Brain Research and Department of Brain and Cognitive Science, Massachusetts Institute of Technology, Cambridge, Massachusetts
| | - Robert Ajemian
- McGovern Institute for Brain Research and Department of Brain and Cognitive Science, Massachusetts Institute of Technology, Cambridge, Massachusetts
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46
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Kim HE, Avraham G, Ivry RB. The Psychology of Reaching: Action Selection, Movement Implementation, and Sensorimotor Learning. Annu Rev Psychol 2020; 72:61-95. [PMID: 32976728 DOI: 10.1146/annurev-psych-010419-051053] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The study of motor planning and learning in humans has undergone a dramatic transformation in the 20 years since this journal's last review of this topic. The behavioral analysis of movement, the foundational approach for psychology, has been complemented by ideas from control theory, computer science, statistics, and, most notably, neuroscience. The result of this interdisciplinary approach has been a focus on the computational level of analysis, leading to the development of mechanistic models at the psychological level to explain how humans plan, execute, and consolidate skilled reaching movements. This review emphasizes new perspectives on action selection and motor planning, research that stands in contrast to the previously dominant representation-based perspective of motor programming, as well as an emerging literature highlighting the convergent operation of multiple processes in sensorimotor learning.
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Affiliation(s)
- Hyosub E Kim
- Departments of Physical Therapy, Psychological and Brain Sciences, and Biomedical Engineering, University of Delaware, Newark, Delaware 19716, USA
| | - Guy Avraham
- Department of Psychology and Helen Wills Neuroscience Institute, University of California, Berkeley, California 94720, USA;
| | - Richard B Ivry
- Department of Psychology and Helen Wills Neuroscience Institute, University of California, Berkeley, California 94720, USA;
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47
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Wasserthal J, Maier-Hein KH, Neher PF, Northoff G, Kubera KM, Fritze S, Harneit A, Geiger LS, Tost H, Wolf RC, Hirjak D. Multiparametric mapping of white matter microstructure in catatonia. Neuropsychopharmacology 2020; 45:1750-1757. [PMID: 32369829 PMCID: PMC7419514 DOI: 10.1038/s41386-020-0691-2] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/01/2020] [Revised: 04/20/2020] [Accepted: 04/22/2020] [Indexed: 12/13/2022]
Abstract
Catatonia is characterized by motor, affective and behavioral abnormalities. To date, the specific role of white matter (WM) abnormalities in schizophrenia spectrum disorders (SSD) patients with catatonia is largely unknown. In this study, diffusion magnetic resonance imaging (dMRI) data were collected from 111 right-handed SSD patients and 28 healthy controls. Catatonic symptoms were examined on the Northoff Catatonia Rating Scale (NCRS). We used whole-brain tract-based spatial statistics (TBSS), tractometry (along tract statistics using TractSeg) and graph analytics (clustering coefficient-CCO, local betweenness centrality-BC) to provide a framework of specific WM microstructural abnormalities underlying catatonia in SSD. Following a categorical approach, post hoc analyses showed differences in fractional anisotrophy (FA) measured via tractometry in the corpus callosum, corticospinal tract and thalamo-premotor tract as well as increased CCO as derived by graph analytics of the right superior parietal cortex (SPC) and left caudate nucleus in catatonic patients (NCRS total score ≥ 3; n = 30) when compared to non-catatonic patients (NCRS total score = 0; n = 29). In catatonic patients according to DSM-IV-TR (n = 43), catatonic symptoms were associated with FA variations (tractometry) of the left corticospinal tract and CCO of the left orbitofrontal cortex, primary motor cortex, supplementary motor area and putamen. This study supports the notion that structural reorganization of WM bundles connecting orbitofrontal/parietal, thalamic and striatal regions contribute to catatonia in SSD patients.
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Affiliation(s)
- Jakob Wasserthal
- Division of Medical Imaging Computing (MIC), German Cancer Research Center (DKFZ), Heidelberg, Germany
- Medical Faculty Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Klaus H Maier-Hein
- Division of Medical Imaging Computing (MIC), German Cancer Research Center (DKFZ), Heidelberg, Germany
- Section of Automated Image Analysis, Heidelberg University Hospital, Heidelberg, Germany
| | - Peter F Neher
- Division of Medical Imaging Computing (MIC), German Cancer Research Center (DKFZ), Heidelberg, Germany
- Medical Faculty Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Georg Northoff
- Mind, Brain Imaging and Neuroethics Research Unit, The Royal's Institute of Mental Health Research, University of Ottawa, Ottawa, ON, Canada
| | - Katharina M Kubera
- Center for Psychosocial Medicine, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany
| | - Stefan Fritze
- Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Anais Harneit
- Department of Psychiatry and Psychotherapy, Research Group System Neuroscience in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Lena S Geiger
- Department of Psychiatry and Psychotherapy, Research Group System Neuroscience in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Heike Tost
- Department of Psychiatry and Psychotherapy, Research Group System Neuroscience in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Robert C Wolf
- Center for Psychosocial Medicine, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany
| | - Dusan Hirjak
- Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
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48
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Sehatpour P, Dondé C, Hoptman MJ, Kreither J, Adair D, Dias E, Vail B, Rohrig S, Silipo G, Lopez-Calderon J, Martinez A, Javitt DC. Network-level mechanisms underlying effects of transcranial direct current stimulation (tDCS) on visuomotor learning. Neuroimage 2020; 223:117311. [PMID: 32889116 PMCID: PMC7778833 DOI: 10.1016/j.neuroimage.2020.117311] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 07/15/2020] [Accepted: 08/18/2020] [Indexed: 02/02/2023] Open
Abstract
Transcranial direct current stimulation (tDCS) is a non-invasive brain stimulation approach in which low level currents are administered over the scalp to influence underlying brain function. Prevailing theories of tDCS focus on modulation of excitation-inhibition balance at the local stimulation location. However, network level effects are reported as well, and appear to depend upon differential underlying mechanisms. Here, we evaluated potential network-level effects of tDCS during the Serial Reaction Time Task (SRTT) using convergent EEG- and fMRI-based connectivity approaches. Motor learning manifested as a significant (p <.0001) shift from slow to fast responses and corresponded to a significant increase in beta-coherence (p <.0001) and fMRI connectivity (p <.01) particularly within the visual-motor pathway. Differential patterns of tDCS effect were observed within different parametric task versions, consistent with network models. Overall, these findings demonstrate objective physiological effects of tDCS at the network level that result in effective behavioral modulation when tDCS parameters are matched to network-level requirements of the underlying task.
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Affiliation(s)
- Pejman Sehatpour
- Division of Experimental Therapeutics, College of Physicians and Surgeons, Columbia University/New York State Psychiatric Institute, New York, NY, USA; Schizophrenia Research Division, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA.
| | - Clément Dondé
- Université Grenoble Alpes, Inserm U1216, Grenoble Institut des Neurosciences, CHU Grenoble-Alpes, F-38000 Grenoble, France
| | - Matthew J Hoptman
- Schizophrenia Research Division, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA; Department of Psychiatry, New York University School of Medicine, New York, NY, USA
| | - Johanna Kreither
- PIA Ciencias Cognitivas, Centro de Investigación en Ciencias Cognitivas, Centro de Psicología Aplicada, Facultad de Psicología, Universidad de Talca, Chile
| | - Devin Adair
- Department of Biomedical Engineering, The City College of New York, CUNY, NY, USA
| | - Elisa Dias
- Schizophrenia Research Division, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA; Department of Psychiatry, New York University School of Medicine, New York, NY, USA
| | - Blair Vail
- Division of Experimental Therapeutics, College of Physicians and Surgeons, Columbia University/New York State Psychiatric Institute, New York, NY, USA
| | - Stephanie Rohrig
- Department of Psychology, Hofstra University, New Hempstead, NY, USA
| | - Gail Silipo
- Schizophrenia Research Division, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA
| | | | - Antigona Martinez
- Division of Experimental Therapeutics, College of Physicians and Surgeons, Columbia University/New York State Psychiatric Institute, New York, NY, USA; Schizophrenia Research Division, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA
| | - Daniel C Javitt
- Division of Experimental Therapeutics, College of Physicians and Surgeons, Columbia University/New York State Psychiatric Institute, New York, NY, USA; Schizophrenia Research Division, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, USA
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49
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Veuthey TL, Derosier K, Kondapavulur S, Ganguly K. Single-trial cross-area neural population dynamics during long-term skill learning. Nat Commun 2020; 11:4057. [PMID: 32792523 PMCID: PMC7426952 DOI: 10.1038/s41467-020-17902-1] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Accepted: 07/22/2020] [Indexed: 11/09/2022] Open
Abstract
Mammalian cortex has both local and cross-area connections, suggesting vital roles for both local and cross-area neural population dynamics in cortically-dependent tasks, like movement learning. Prior studies of movement learning have focused on how single-area population dynamics change during short-term adaptation. It is unclear how cross-area dynamics contribute to movement learning, particularly long-term learning and skill acquisition. Using simultaneous recordings of rodent motor (M1) and premotor (M2) cortex and computational methods, we show how cross-area activity patterns evolve during reach-to-grasp learning in rats. The emergence of reach-related modulation in cross-area activity correlates with skill acquisition, and single-trial modulation in cross-area activity predicts reaction time and reach duration. Local M2 neural activity precedes local M1 activity, supporting top-down hierarchy between the regions. M2 inactivation preferentially affects cross-area dynamics and behavior, with minimal disruption of local M1 dynamics. Together, these results indicate that cross-area population dynamics are necessary for learned motor skills.
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Affiliation(s)
- T L Veuthey
- Neuroscience Graduate Program, University of California San Francisco, San Francisco, CA, USA
- Medical Scientist Training Program, University of California San Francisco, San Francisco, CA, USA
- Neurology and Rehabilitation Service, San Francisco Veterans Affairs Medical Center, San Francisco, CA, USA
- Department of Neurology, University of California San Francisco, San Francisco, CA, USA
| | - K Derosier
- Neuroscience Graduate Program, University of California San Francisco, San Francisco, CA, USA
- Neurology and Rehabilitation Service, San Francisco Veterans Affairs Medical Center, San Francisco, CA, USA
- Department of Neurology, University of California San Francisco, San Francisco, CA, USA
| | - S Kondapavulur
- Medical Scientist Training Program, University of California San Francisco, San Francisco, CA, USA
- Neurology and Rehabilitation Service, San Francisco Veterans Affairs Medical Center, San Francisco, CA, USA
- Department of Neurology, University of California San Francisco, San Francisco, CA, USA
| | - K Ganguly
- Neurology and Rehabilitation Service, San Francisco Veterans Affairs Medical Center, San Francisco, CA, USA.
- Department of Neurology, University of California San Francisco, San Francisco, CA, USA.
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50
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Dynamic coordination of the perirhinal cortical neurons supports coherent representations between task epochs. Commun Biol 2020; 3:406. [PMID: 32733065 PMCID: PMC7393175 DOI: 10.1038/s42003-020-01129-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Accepted: 07/08/2020] [Indexed: 01/10/2023] Open
Abstract
Cortical neurons show distinct firing patterns across multiple task epochs characterized by different computations. Recent studies suggest that such distinct patterns underlie dynamic population code achieving computational flexibility, whereas neurons in some cortical areas often show coherent firing patterns across epochs. To understand how coherent single-neuron code contributes to dynamic population code, we analyzed neural responses in the rat perirhinal cortex (PRC) during cue and reward epochs of a two-alternative forced-choice task. We found that the PRC neurons often encoded the opposite choice directions between those epochs. By using principal component analysis as a population-level analysis, we identified neural subspaces associated with each epoch, which reflected coordination across the neurons. The cue and reward epochs shared neural dimensions where the choice directions were consistently discriminated. Interestingly, those dimensions were supported by dynamically changing contributions of the individual neurons. These results demonstrated heterogeneity of coherent single-neuron representations in their contributions to population code.
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