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Wang E, Shuryak I, Brenner DJ. A competing risks machine learning study of neutron dose, fractionation, age, and sex effects on mortality in 21,000 mice. Sci Rep 2024; 14:17974. [PMID: 39095647 PMCID: PMC11297256 DOI: 10.1038/s41598-024-68717-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Accepted: 07/25/2024] [Indexed: 08/04/2024] Open
Abstract
This study explores the impact of densely-ionizing radiation on non-cancer and cancer diseases, focusing on dose, fractionation, age, and sex effects. Using historical mortality data from approximately 21,000 mice exposed to fission neutrons, we employed random survival forest (RSF), a powerful machine learning algorithm accommodating nonlinear dependencies and interactions, treating cancer and non-cancer outcomes as competing risks. Unlike traditional parametric models, RSF avoids strict assumptions and captures complex data relationships through decision tree ensembles. SHAP (SHapley Additive exPlanations) values and variable importance scores were employed for interpretation. The findings revealed clear dose-response trends, with cancer being the predominant cause of mortality. SHAP value dose-response shapes differed, showing saturation for cancer hazard at high doses (> 2 Gy) and a more linear pattern at lower doses. Non-cancer responses remained more linear throughout the entire dose range. There was a potential inverse dose rate effect for cancer, while the evidence for non-cancer was less conclusive. Sex and age effects were less pronounced. This investigation, utilizing machine learning, enhances our understanding of the patterns of non-cancer and cancer mortality induced by densely-ionizing radiations, emphasizing the importance of such approaches in radiation research, including space travel and radioprotection.
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Affiliation(s)
- Eric Wang
- Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11, New York, NY, 10032, USA.
| | - Igor Shuryak
- Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11, New York, NY, 10032, USA
| | - David J Brenner
- Center for Radiological Research, Columbia University Irving Medical Center, 630 West 168th street, VC-11, New York, NY, 10032, USA
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Huff JL, Poignant F, Rahmanian S, Khan N, Blakely EA, Britten RA, Chang P, Fornace AJ, Hada M, Kronenberg A, Norman RB, Patel ZS, Shay JW, Weil MM, Simonsen LC, Slaba TC. Galactic cosmic ray simulation at the NASA space radiation laboratory - Progress, challenges and recommendations on mixed-field effects. LIFE SCIENCES IN SPACE RESEARCH 2023; 36:90-104. [PMID: 36682835 DOI: 10.1016/j.lssr.2022.09.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Revised: 09/01/2022] [Accepted: 09/05/2022] [Indexed: 06/17/2023]
Abstract
For missions beyond low Earth orbit to the moon or Mars, space explorers will encounter a complex radiation field composed of various ion species with a broad range of energies. Such missions pose significant radiation protection challenges that need to be solved in order to minimize exposures and associated health risks. An innovative galactic cosmic ray simulator (GCRsim) was recently developed at the NASA Space Radiation Laboratory (NSRL) at Brookhaven National Laboratory (BNL). The GCRsim technology is intended to represent major components of the space radiation environment in a ground analog laboratory setting where it can be used to improve understanding of biological risks and serve as a testbed for countermeasure development and validation. The current GCRsim consists of 33 energetic ion beams that collectively simulate the primary and secondary GCR field encountered by humans in space over the broad range of particle types, energies, and linear energy transfer (LET) of interest to health effects. A virtual workshop was held in December 2020 to assess the status of the NASA baseline GCRsim. Workshop attendees examined various aspects of simulator design, with a particular emphasis on beam selection strategies. Experimental results, modeling approaches, areas of consensus, and questions of concern were also discussed in detail. This report includes a summary of the GCRsim workshop and a description of the current status of the GCRsim. This information is important for future advancements and applications in space radiobiology.
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Affiliation(s)
- Janice L Huff
- NASA Langley Research Center, Hampton, VA, 23681, United States of America.
| | - Floriane Poignant
- National Institute of Aerospace, Hampton, VA, 23666, United States of America
| | - Shirin Rahmanian
- National Institute of Aerospace, Hampton, VA, 23666, United States of America
| | - Nafisah Khan
- National Institute of Aerospace, Hampton, VA, 23666, United States of America
| | - Eleanor A Blakely
- Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States of America
| | - Richard A Britten
- Department of Radiation Oncology, Department of Microbiology and Molecular Cell Biology, Leroy T Canoles Jr. Cancer Center, School of Medicine, Eastern Virginia Medical School, Norfolk, VA, 23507, United States of America
| | - Polly Chang
- SRI International, Menlo Park, CA, 94025, United States of America
| | - Albert J Fornace
- Georgetown University, Washington, DC, 20057, United States of America
| | - Megumi Hada
- Prairie View A&M University, Prairie View, TX, 77446, United States of America
| | - Amy Kronenberg
- Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States of America
| | - Ryan B Norman
- NASA Langley Research Center, Hampton, VA, 23681, United States of America
| | - Zarana S Patel
- KBR Inc., Houston, TX, 77058, United States of America; NASA Johnson Space Center, Houston, TX, 77058, United States of America
| | - Jerry W Shay
- University of Texas Southwestern Medical Center, Dallas, TX, 75390, United States of America
| | - Michael M Weil
- Colorado State University, Fort Collins, CO, 80523, United States of America
| | - Lisa C Simonsen
- NASA Headquarters, Washington, DC, 20546, United States of America
| | - Tony C Slaba
- NASA Langley Research Center, Hampton, VA, 23681, United States of America
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Impact of Radiation Quality on Microdosimetry and Chromosome Aberrations for High-Energy (>250 MeV/n) Ions. Life (Basel) 2022; 12:life12030358. [PMID: 35330109 PMCID: PMC8955614 DOI: 10.3390/life12030358] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Revised: 02/25/2022] [Accepted: 02/28/2022] [Indexed: 11/17/2022] Open
Abstract
Studying energy deposition by space radiation at the cellular scale provides insights on health risks to astronauts. Using the Monte Carlo track structure code RITRACKS, and the chromosome aberrations code RITCARD, we performed a modeling study of single-ion energy deposition spectra and chromosome aberrations for high-energy (>250 MeV/n) ion beams with linear energy transfer (LET) varying from 0.22 to 149.2 keV/µm. The calculations were performed using cells irradiated directly by mono-energetic ion beams, and by poly-energetic beams after particle transport in a digital mouse model, representing the radiation exposure of a cell in a tissue. To discriminate events from ion tracks directly traversing the nucleus, to events from δ-electrons emitted by distant ion tracks, we categorized ion contributions to microdosimetry or chromosome aberrations into direct and indirect contributions, respectively. The ions were either ions of the mono-energetic beam or secondary ions created in the digital mouse due to interaction of the beam with tissues. For microdosimetry, the indirect contribution is largely independent of the beam LET and minimally impacted by the beam interactions in mice. In contrast, the direct contribution is strongly dependent on the beam LET and shows increased probabilities of having low and high-energy deposition events when considering beam transport. Regarding chromosome aberrations, the indirect contribution induces a small number of simple exchanges, and a negligible number of complex exchanges. The direct contribution is responsible for most simple and complex exchanges. The complex exchanges are significantly increased for some low-LET ion beams when considering beam transport.
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