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For: Nuzhdin SV, Harshman LG, Zhou M, Harmon K. Genome-enabled hitchhiking mapping identifies QTLs for stress resistance in natural Drosophila. Heredity (Edinb) 2007;99:313-21. [PMID: 17593945 DOI: 10.1038/sj.hdy.6801003] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
Number Cited by Other Article(s)
1
Gerritsma S, Jalvingh KM, van de Beld C, Beerda J, van de Zande L, Vrieling K, Wertheim B. Natural and Artificial Selection for Parasitoid Resistance in Drosophila melanogaster Leave Different Genetic Signatures. Front Genet 2019;10:479. [PMID: 31214243 PMCID: PMC6557190 DOI: 10.3389/fgene.2019.00479] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2018] [Accepted: 05/03/2019] [Indexed: 12/20/2022]  Open
2
Everman ER, McNeil CL, Hackett JL, Bain CL, Macdonald SJ. Dissection of Complex, Fitness-Related Traits in Multiple Drosophila Mapping Populations Offers Insight into the Genetic Control of Stress Resistance. Genetics 2019;211:1449-1467. [PMID: 30760490 PMCID: PMC6456312 DOI: 10.1534/genetics.119.301930] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Accepted: 02/06/2019] [Indexed: 12/11/2022]  Open
3
Wang Z, Wang L, Wang Z, Lu BR. Non-random transmission of parental alleles into crop-wild and crop-weed hybrid lineages separated by a transgene and neutral identifiers in rice. Sci Rep 2017;7:10436. [PMID: 28874702 PMCID: PMC5585250 DOI: 10.1038/s41598-017-10596-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2017] [Accepted: 08/10/2017] [Indexed: 11/09/2022]  Open
4
Power analysis of artificial selection experiments using efficient whole genome simulation of quantitative traits. Genetics 2015;199:991-1005. [PMID: 25672748 PMCID: PMC4391575 DOI: 10.1534/genetics.115.175075] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2014] [Accepted: 02/05/2015] [Indexed: 11/18/2022]  Open
5
Jalvingh KM, Chang PL, Nuzhdin SV, Wertheim B. Genomic changes under rapid evolution: selection for parasitoid resistance. Proc Biol Sci 2014;281:20132303. [PMID: 24500162 PMCID: PMC3924063 DOI: 10.1098/rspb.2013.2303] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2013] [Accepted: 01/14/2014] [Indexed: 12/30/2022]  Open
6
Nuzhdin SV, Turner TL. Promises and limitations of hitchhiking mapping. Curr Opin Genet Dev 2013;23:694-9. [PMID: 24239053 PMCID: PMC3872824 DOI: 10.1016/j.gde.2013.10.002] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2013] [Revised: 08/20/2013] [Accepted: 10/03/2013] [Indexed: 12/18/2022]
7
Kessner D, Turner TL, Novembre J. Maximum likelihood estimation of frequencies of known haplotypes from pooled sequence data. Mol Biol Evol 2013;30:1145-58. [PMID: 23364324 PMCID: PMC3670732 DOI: 10.1093/molbev/mst016] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
8
Chelo IM, Teotónio H. The opportunity for balancing selection in experimental populations of Caenorhabditis elegans. Evolution 2012;67:142-56. [PMID: 23289568 DOI: 10.1111/j.1558-5646.2012.01744.x] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
9
Remolina SC, Chang PL, Leips J, Nuzhdin SV, Hughes KA. Genomic basis of aging and life-history evolution in Drosophila melanogaster. Evolution 2012;66:3390-403. [PMID: 23106705 DOI: 10.1111/j.1558-5646.2012.01710.x] [Citation(s) in RCA: 94] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
10
Turner TL, Miller PM. Investigating natural variation in Drosophila courtship song by the evolve and resequence approach. Genetics 2012;191:633-42. [PMID: 22466043 PMCID: PMC3374323 DOI: 10.1534/genetics.112.139337] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2012] [Accepted: 03/18/2012] [Indexed: 12/13/2022]  Open
11
Telonis-Scott M, Gane M, DeGaris S, Sgrò CM, Hoffmann AA. High resolution mapping of candidate alleles for desiccation resistance in Drosophila melanogaster under selection. Mol Biol Evol 2011;29:1335-51. [PMID: 22130970 DOI: 10.1093/molbev/msr294] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]  Open
12
Mapping Mendelian traits in asexual progeny using changes in marker allele frequency. Genet Res (Camb) 2011;93:221-32. [DOI: 10.1017/s0016672311000115] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
13
Turner TL, Stewart AD, Fields AT, Rice WR, Tarone AM. Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster. PLoS Genet 2011;7:e1001336. [PMID: 21437274 PMCID: PMC3060078 DOI: 10.1371/journal.pgen.1001336] [Citation(s) in RCA: 214] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2010] [Accepted: 02/14/2011] [Indexed: 01/08/2023]  Open
14
Wiener P, Edriss MA, Williams JL, Waddington D, Law A, Woolliams JA, Gutiérrez-Gil B. Information content in genome-wide scans: concordance between patterns of genetic differentiation and linkage mapping associations. BMC Genomics 2011;12:65. [PMID: 21269469 PMCID: PMC3041744 DOI: 10.1186/1471-2164-12-65] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2010] [Accepted: 01/26/2011] [Indexed: 01/06/2023]  Open
15
WERTHEIM BREGJE, KRAAIJEVELD ALEXR, HOPKINS MEIRIONG, WALTHER BOER MARK, GODFRAY HCHARLESJ. Functional genomics of the evolution of increased resistance to parasitism in Drosophila. Mol Ecol 2010;20:932-49. [DOI: 10.1111/j.1365-294x.2010.04911.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
16
Goldstein DB, Noor MAF. Lessons in complexity from yeast. Nature 2010;464:985-6. [DOI: 10.1038/464985a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
17
Norry FM, Larsen PF, Liu Y, Loeschcke V. Combined expression patterns of QTL-linked candidate genes best predict thermotolerance in Drosophila melanogaster. JOURNAL OF INSECT PHYSIOLOGY 2009;55:1050-1057. [PMID: 19651134 DOI: 10.1016/j.jinsphys.2009.07.009] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2009] [Revised: 07/22/2009] [Accepted: 07/23/2009] [Indexed: 05/28/2023]
18
Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression. Genetics 2009;183:547-61, 1SI-21SI. [PMID: 19667135 DOI: 10.1534/genetics.109.105957] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
19
Burke MK, Rose MR. Experimental evolution withDrosophila. Am J Physiol Regul Integr Comp Physiol 2009;296:R1847-54. [DOI: 10.1152/ajpregu.90551.2008] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
20
Turner TL, von Wettberg EJ, Nuzhdin SV. Genomic analysis of differentiation between soil types reveals candidate genes for local adaptation in Arabidopsis lyrata. PLoS One 2008;3:e3183. [PMID: 18784841 PMCID: PMC2527522 DOI: 10.1371/journal.pone.0003183] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2008] [Accepted: 08/19/2008] [Indexed: 01/21/2023]  Open
21
Wisser RJ, Murray SC, Kolkman JM, Ceballos H, Nelson RJ. Selection mapping of loci for quantitative disease resistance in a diverse maize population. Genetics 2008;180:583-99. [PMID: 18723892 PMCID: PMC2535707 DOI: 10.1534/genetics.108.090118] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2008] [Accepted: 07/05/2008] [Indexed: 11/18/2022]  Open
22
Detecting genetic responses to environmental change. Nat Rev Genet 2008;9:421-32. [PMID: 18463665 DOI: 10.1038/nrg2339] [Citation(s) in RCA: 328] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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