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For: Lan W, Hu Z, Shen J, Wang C, Jiang F, Liu H, Long D, Liu M, Cao C. Structural investigation into physiological DNA phosphorothioate modification. Sci Rep 2016;6:25737. [PMID: 27169778 PMCID: PMC4864419 DOI: 10.1038/srep25737] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2016] [Accepted: 04/20/2016] [Indexed: 12/14/2022]  Open
Number Cited by Other Article(s)
1
Sieskind R, Missoury S, Madru C, Commenge I, Niogret G, Hollenstein M, Rondelez Y, Sauguet L, Haouz A, Legrand P, Delarue M. Crystal structures of monomeric BsmI restriction endonuclease reveal coordinated sequential cleavage of two DNA strands. Commun Biol 2025;8:387. [PMID: 40055548 PMCID: PMC11889245 DOI: 10.1038/s42003-025-07612-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2024] [Accepted: 01/28/2025] [Indexed: 05/13/2025]  Open
2
Lardeux H, Stavenhagen K, Paris C, Dueholm R, Kurek C, De Maria L, Gnerlich F, Leek T, Czechtizky W, Guillarme D, Jora M. Unravelling the Link between Oligonucleotide Structure and Diastereomer Separation in Hydrophilic Interaction Chromatography. Anal Chem 2024;96:9994-10002. [PMID: 38855895 PMCID: PMC11190878 DOI: 10.1021/acs.analchem.4c01384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 04/26/2024] [Accepted: 06/03/2024] [Indexed: 06/11/2024]
3
Chen T, Tang S, Fu Y, Napolitano JG, Zhang K. Analytical techniques for characterizing diastereomers of phosphorothioated oligonucleotides. J Chromatogr A 2022;1678:463349. [PMID: 35908512 DOI: 10.1016/j.chroma.2022.463349] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Revised: 07/07/2022] [Accepted: 07/15/2022] [Indexed: 12/18/2022]
4
Shadid M, Badawi M, Abulrob A. Antisense oligonucleotides: absorption, distribution, metabolism, and excretion. Expert Opin Drug Metab Toxicol 2021;17:1281-1292. [PMID: 34643122 DOI: 10.1080/17425255.2021.1992382] [Citation(s) in RCA: 52] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
5
Saran R, Huang Z, Liu J. Phosphorothioate nucleic acids for probing metal binding, biosensing and nanotechnology. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2020.213624] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
6
Yuan Y, Ma Y, Huo D, Mills MJL, Wei J, Su W, Zhang R. Multipolar Description of Atom-Atom Electrostatic Interaction Energies in Single/Double-Stranded DNAs. J Phys Chem B 2020;124:10089-10103. [PMID: 33138384 DOI: 10.1021/acs.jpcb.0c06757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
7
Dai Z, Tan Y, He K, Chen H, Liu J. Strict DNA Valence Control in Ultrasmall Thiolate-Protected Near-Infrared-Emitting Gold Nanoparticles. J Am Chem Soc 2020;142:14023-14027. [DOI: 10.1021/jacs.0c00443] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
8
Islam MA, Fujisaka A, Kawakami J, Yamaguchi T, Obika S. Different reactivity of Sp and Rp isomers of phosphorothioate-modified oligonucleotides in a duplex structure. Bioorg Med Chem Lett 2020;30:127166. [PMID: 32527537 DOI: 10.1016/j.bmcl.2020.127166] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2019] [Revised: 03/27/2020] [Accepted: 04/01/2020] [Indexed: 10/24/2022]
9
Jing Z, Qi R, Thibonnier M, Ren P. Molecular Dynamics Study of the Hybridization between RNA and Modified Oligonucleotides. J Chem Theory Comput 2019;15:6422-6432. [PMID: 31553600 PMCID: PMC6889957 DOI: 10.1021/acs.jctc.9b00519] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
10
Yao P, Liu Y, Wang C, Lan W, Wang C, Cao C. Investigating the interactions between DNA and DndE during DNA phosphorothioation. FEBS Lett 2019;593:2790-2799. [PMID: 31276192 DOI: 10.1002/1873-3468.13529] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Revised: 06/29/2019] [Accepted: 07/01/2019] [Indexed: 01/08/2023]
11
Wang L, Jiang S, Deng Z, Dedon PC, Chen S. DNA phosphorothioate modification-a new multi-functional epigenetic system in bacteria. FEMS Microbiol Rev 2019;43:109-122. [PMID: 30289455 PMCID: PMC6435447 DOI: 10.1093/femsre/fuy036] [Citation(s) in RCA: 70] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 10/03/2018] [Indexed: 12/20/2022]  Open
12
Investigation of factors influencing the separation of diastereomers of phosphorothioated oligonucleotides. Anal Bioanal Chem 2019;411:3383-3394. [PMID: 31020370 PMCID: PMC6543027 DOI: 10.1007/s00216-019-01813-2] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2019] [Revised: 03/21/2019] [Accepted: 03/27/2019] [Indexed: 01/18/2023]
13
Diastereomers of a mono-substituted phosphoryl guanidine trideoxyribonucleotide: Isolation and properties. Biochem Biophys Res Commun 2019;513:807-811. [PMID: 31000201 DOI: 10.1016/j.bbrc.2019.04.024] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Accepted: 04/03/2019] [Indexed: 12/19/2022]
14
Structural basis for the recognition of sulfur in phosphorothioated DNA. Nat Commun 2018;9:4689. [PMID: 30409991 PMCID: PMC6224610 DOI: 10.1038/s41467-018-07093-1] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 10/12/2018] [Indexed: 12/23/2022]  Open
15
Tomaszewska-Antczak A, Jastrzębska K, Maciaszek A, Mikołajczyk B, Guga P. P-Stereodefined phosphorothioate analogs of glycol nucleic acids-synthesis and structural properties. RSC Adv 2018;8:24942-24952. [PMID: 35542141 PMCID: PMC9082371 DOI: 10.1039/c8ra05568h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Accepted: 07/02/2018] [Indexed: 11/21/2022]  Open
16
Milton J, Zhang T, Bellamy C, Swayze E, Hart C, Weisser M, Hecht S, Rotstein S. HELM Software for Biopolymers. J Chem Inf Model 2017;57:1233-1239. [PMID: 28471655 DOI: 10.1021/acs.jcim.6b00442] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
17
Mechanistic Investigation on ROS Resistance of Phosphorothioated DNA. Sci Rep 2017;7:42823. [PMID: 28216673 PMCID: PMC5316992 DOI: 10.1038/srep42823] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Accepted: 01/16/2017] [Indexed: 11/23/2022]  Open
18
Dai D, Du A, Xiong K, Pu T, Zhou X, Deng Z, Liang J, He X, Wang Z. DNA Phosphorothioate Modification Plays a Role in Peroxides Resistance in Streptomyces lividans. Front Microbiol 2016;7:1380. [PMID: 27630631 PMCID: PMC5005934 DOI: 10.3389/fmicb.2016.01380] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Accepted: 08/22/2016] [Indexed: 12/12/2022]  Open
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