1
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Jia Y, Gu H, Li Y. Influence of inhibitory autapses on synchronization of inhibitory network gamma oscillations. Cogn Neurodyn 2023; 17:1131-1152. [PMID: 37786650 PMCID: PMC10542088 DOI: 10.1007/s11571-022-09856-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 06/22/2022] [Accepted: 07/12/2022] [Indexed: 11/30/2022] Open
Abstract
A recent experimental study showed that inhibitory autapses favor firing synchronization of parvalbumin interneurons in the neocortex during gamma oscillations. In the present paper, to provide a comprehensive and deep understanding to the experimental observation, the influence of inhibitory autapses on synchronization of interneuronal network gamma oscillations is theoretically investigated. Weak, middle, and strong synchronizations of a globally inhibitory coupled network composed of Wang-Buzsáki model without autapses appear at the bottom-left, middle, and top-right of the parameter plane with the conductance (gsyn) and the decay constant (τsyn) of inhibitory synapses taken as the x-axis and y-axis, respectively. After introducing inhibitory autapses, the border between the strong and middle synchronizations in the (gsyn, τsyn) plane moves to the top-right with increasing the conductance (gaut) and the decay constant (τaut) of autapses, due to that interspike interval of the single neuron becomes longer, leading to that larger τsyn is needed to ensure the strong synchronization. Then, the synchronization degree of middle and strong synchronizations around the border in the (gsyn, τsyn) plane decreases, while of strong synchronization in the remaining region remains unchanged. The synchronization degree of weak synchronization increases with increasing τaut and gaut, due to that the inhibitory autaptic current becomes strong and long to facilitate synchronization. The enhancement of weak synchronization modulated by inhibitory autapses is also simulated in the random, small-world, and scale-free networks, which may provide explanations to the experimental observation. These results present complex dynamics of synchronization modulated by inhibitory autapses, which needs future experimental demonstrations.
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Affiliation(s)
- Yanbing Jia
- School of Mathematics and Statistics, Henan University of Science and Technology, Luoyang, 471000 China
| | - Huaguang Gu
- School of Aerospace Engineering and Applied Mechanics, Tongji University, Shanghai, 200092 China
| | - Yuye Li
- College of Mathematics and Computer Science, Chifeng University, Chifeng, 024000 China
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2
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Srinivasan A, Srinivasan A, Goodman MR, Riceberg JS, Guise KG, Shapiro ML. Hippocampal and Medial Prefrontal Cortex Fractal Spiking Patterns Encode Episodes and Rules. CHAOS, SOLITONS, AND FRACTALS 2023; 171:113508. [PMID: 37251275 PMCID: PMC10217776 DOI: 10.1016/j.chaos.2023.113508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
A central question in neuroscience is how the brain represents and processes information to guide behavior. The principles that organize brain computations are not fully known, and could include scale-free, or fractal patterns of neuronal activity. Scale-free brain activity may be a natural consequence of the relatively small subsets of neuronal populations that respond to task features, i.e., sparse coding. The size of the active subsets constrains the possible sequences of inter-spike intervals (ISI), and selecting from this limited set may produce firing patterns across wide-ranging timescales that form fractal spiking patterns. To investigate the extent to which fractal spiking patterns corresponded with task features, we analyzed ISIs in simultaneously recorded populations of CA1 and medial prefrontal cortical (mPFC) neurons in rats performing a spatial memory task that required both structures. CA1 and mPFC ISI sequences formed fractal patterns that predicted memory performance. CA1 pattern duration, but not length or content, varied with learning speed and memory performance whereas mPFC patterns did not. The most common CA1 and mPFC patterns corresponded with each region's cognitive function: CA1 patterns encoded behavioral episodes which linked the start, choice, and goal of paths through the maze whereas mPFC patterns encoded behavioral "rules" which guided goal selection. mPFC patterns predicted changing CA1 spike patterns only as animals learned new rules. Together, the results suggest that CA1 and mPFC population activity may predict choice outcomes by using fractal ISI patterns to compute task features.
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Affiliation(s)
- Aditya Srinivasan
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, 47 New Scotland Ave, Mail Code 126, Albany, NY 12208
| | - Arvind Srinivasan
- College of Health Sciences, California Northstate University, 2910 Prospect Park Drive, Rancho Cordova, CA 95670
| | - Michael R. Goodman
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, 47 New Scotland Ave, Mail Code 126, Albany, NY 12208
| | - Justin S. Riceberg
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, 47 New Scotland Ave, Mail Code 126, Albany, NY 12208
- Department of Psychiatry, Icahn School of Medicine at Mount Sinai, Hess Center for Science and Medicine, 1470 Madison Avenue New York, NY 10029
| | - Kevin G. Guise
- Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, Hess Center for Science and Medicine, 1470 Madison Avenue New York, NY 10029
| | - Matthew L. Shapiro
- Department of Neuroscience and Experimental Therapeutics, Albany Medical College, 47 New Scotland Ave, Mail Code 126, Albany, NY 12208
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3
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Feali MS, Hamidi A. Dynamical response of Autaptic Izhikevich Neuron disturbed by Gaussian white noise. J Comput Neurosci 2023; 51:59-69. [PMID: 36040677 DOI: 10.1007/s10827-022-00832-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Revised: 06/16/2022] [Accepted: 08/14/2022] [Indexed: 01/18/2023]
Abstract
Using the improved memristive Izhikevich neuron model, the effects of autaptic connection as well as electromagnetic induction are studied on the dynamical behavior of neuronal spiking. Using bifurcation analysis for membrane potentials, the effects of autaptic and electromagnetic parameters on the mode transition in electrical activities of the neuron model are investigated. Furthermore, white Gaussian noise is considered in the neuron model, to evaluate the effect of electromagnetic disturbance on the firing pattern of the neuron using the coefficient of variation. The bifurcation diagram versus autaptic conductance and time delay has been extensively studied. The results show that the effects of autaptic connection as well as electromagnetic induction on the spiking behavior of neurons can be well demonstrated by using the Izhikevich model. The electrical activities of the Izhikevich neuron model become more complex when the effects of autaptic connection and electromagnetic induction are considered in the neuron model. Using the Izhikevich neuron model, the high variety of spiking/bursting patterns is represented in the bifurcation diagram of inter-spike interval versus autaptic or electromagnetic parameters. Noise can have distinct effects on the spiking activity of the neuron, for the subthreshold input current, increasing the intensity of the electromagnetic noise increases the regularity of the neuron spiking, but for the suprathreshold input current, the regularity of spiking decreases with noise.
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Affiliation(s)
- Mohammad Saeed Feali
- Department of Electrical Engineering, Kermanshah Branch, Islamic Azad University, Kermanshah, Iran.
| | - Abdolsamad Hamidi
- Electrical Engineering Department, Lorestan University, Khorramabad, Lorestan, Iran
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4
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Protachevicz PR, Iarosz KC, Caldas IL, Antonopoulos CG, Batista AM, Kurths J. Influence of Autapses on Synchronization in Neural Networks With Chemical Synapses. Front Syst Neurosci 2020; 14:604563. [PMID: 33328913 PMCID: PMC7734146 DOI: 10.3389/fnsys.2020.604563] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2020] [Accepted: 11/05/2020] [Indexed: 11/29/2022] Open
Abstract
A great deal of research has been devoted on the investigation of neural dynamics in various network topologies. However, only a few studies have focused on the influence of autapses, synapses from a neuron onto itself via closed loops, on neural synchronization. Here, we build a random network with adaptive exponential integrate-and-fire neurons coupled with chemical synapses, equipped with autapses, to study the effect of the latter on synchronous behavior. We consider time delay in the conductance of the pre-synaptic neuron for excitatory and inhibitory connections. Interestingly, in neural networks consisting of both excitatory and inhibitory neurons, we uncover that synchronous behavior depends on their synapse type. Our results provide evidence on the synchronous and desynchronous activities that emerge in random neural networks with chemical, inhibitory and excitatory synapses where neurons are equipped with autapses.
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Affiliation(s)
| | - Kelly C Iarosz
- Faculdade de Telêmaco Borba, FATEB, Telêmaco Borba, Brazil.,Graduate Program in Chemical Engineering, Federal University of Technology Paraná, Ponta Grossa, Brazil
| | - Iberê L Caldas
- Institute of Physics, University of São Paulo, São Paulo, Brazil
| | - Chris G Antonopoulos
- Department of Mathematical Sciences, University of Essex, Colchester, United Kingdom
| | - Antonio M Batista
- Institute of Physics, University of São Paulo, São Paulo, Brazil.,Department of Mathematics and Statistics, State University of Ponta Grossa, Ponta Grossa, Brazil
| | - Jurgen Kurths
- Department Complexity Science, Potsdam Institute for Climate Impact Research, Potsdam, Germany.,Department of Physics, Humboldt University, Berlin, Germany.,Centre for Analysis of Complex Systems, Sechenov First Moscow State Medical University, Moscow, Russia
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5
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Kim J, Augustine GJ. Molecular Layer Interneurons: Key Elements of Cerebellar Network Computation and Behavior. Neuroscience 2020; 462:22-35. [PMID: 33075461 DOI: 10.1016/j.neuroscience.2020.10.008] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 10/02/2020] [Accepted: 10/05/2020] [Indexed: 02/05/2023]
Abstract
Molecular layer interneurons (MLIs) play an important role in cerebellar information processing by controlling Purkinje cell (PC) activity via inhibitory synaptic transmission. A local MLI network, constructed from both chemical and electrical synapses, is organized into spatially structured clusters that amplify feedforward and lateral inhibition to shape the temporal and spatial patterns of PC activity. Several recent in vivo studies indicate that such MLI circuits contribute not only to sensorimotor information processing, but also to precise motor coordination and cognitive processes. Here, we review current understanding of the organization of MLI circuits and their roles in the function of the mammalian cerebellum.
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Affiliation(s)
- Jinsook Kim
- Lee Kong Chian School of Medicine Nanyang Technological University Singapore 308238, Singapore
| | - George J Augustine
- Lee Kong Chian School of Medicine Nanyang Technological University Singapore 308238, Singapore.
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6
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Bekkers JM. Autaptic Cultures: Methods and Applications. Front Synaptic Neurosci 2020; 12:18. [PMID: 32425765 PMCID: PMC7203343 DOI: 10.3389/fnsyn.2020.00018] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Accepted: 04/01/2020] [Indexed: 11/13/2022] Open
Abstract
Neurons typically form daisy chains of synaptic connections with other neurons, but they can also form synapses with themselves. Although such self-synapses, or autapses, are comparatively rare in vivo, they are surprisingly common in dissociated neuronal cultures. At first glance, autapses in culture seem like a mere curiosity. However, by providing a simple model system in which a single recording electrode gives simultaneous access to the pre- and postsynaptic compartments, autaptic cultures have proven to be invaluable in facilitating important and elegant experiments in the area of synaptic neuroscience. Here, I provide detailed protocols for preparing and recording from autaptic cultures (also called micro-island or microdot cultures). Variations on the basic procedure are presented, as well as practical tips for optimizing the outcomes. I also illustrate the utility of autaptic cultures by reviewing the types of experiments that have used them over the past three decades. These examples serve to highlight the power and elegance of this simple model system, and will hopefully inspire new experiments for the interrogation of synaptic function.
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Affiliation(s)
- John M Bekkers
- Eccles Institute of Neuroscience, The John Curtin School of Medical Research, The Australian National University, Canberra, ACT, Australia
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7
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Zhao Z, Li L, Gu H. Different dynamical behaviors induced by slow excitatory feedback for type II and III excitabilities. Sci Rep 2020; 10:3646. [PMID: 32108168 PMCID: PMC7046675 DOI: 10.1038/s41598-020-60627-w] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2019] [Accepted: 02/14/2020] [Indexed: 11/13/2022] Open
Abstract
Neuronal excitability is classified as type I, II, or III, according to the responses of electronic activities, which play different roles. In the present paper, the effect of an excitatory autapse on type III excitability is investigated and compared to type II excitability in the Morris-Lecar model, based on Hopf bifurcation and characteristics of the nullcline. The autaptic current of a fast-decay autapse produces periodic stimulations, and that of a slow-decay autapse highly resembles sustained stimulations. Thus, both fast- and slow-decay autapses can induce a resting state for type II excitability that changes to repetitive firing. However, for type III excitability, a fast-decay autapse can induce a resting state to change to repetitive firing, while a slow-decay autapse can induce a resting state to change to a resting state following a transient spike instead of repetitive spiking, which shows the abnormal phenomenon that a stronger excitatory effect of a slow-decay autapse just induces weaker responses. Our results uncover a novel paradoxical phenomenon of the excitatory effect, and we present potential functions of fast- and slow-decay autapses that are helpful for the alteration and maintenance of type III excitability in the real nervous system related to neuropathic pain or sound localization.
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Affiliation(s)
- Zhiguo Zhao
- School of Science, Henan Institute of Technology, Xinxiang, 453003, China
| | - Li Li
- Guangdong Key Laboratory of Modern Control Technology, Guangdong Institute of Intelligent Manufacturing, Guangzhou, 510070, China
| | - Huaguang Gu
- School of Aerospace Engineering and Applied Mechanics, Tongji University, Shanghai, 200092, China.
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8
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Effects of synaptic integration on the dynamics and computational performance of spiking neural network. Cogn Neurodyn 2020; 14:347-357. [PMID: 32399076 DOI: 10.1007/s11571-020-09572-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Revised: 01/07/2020] [Accepted: 02/11/2020] [Indexed: 12/22/2022] Open
Abstract
Neurons in the brain receive thousands of synaptic inputs from other neurons. This afferent information is processed by neurons through synaptic integration, which is an important information processing mechanism in biological neural networks. Synaptic currents integrated from spiking trains of presynaptic neurons have complex nonlinear dynamics which endow neurons with significant computational abilities. However, in many computational studies of neural networks, external input currents are often simply taken as a direct current that is static. In this paper, the influences of synaptic and noise external currents on the dynamics of spiking neural network and its computational capability have been investigated in detail. Our results show that due to the nonlinear synaptic integration, both of fast and slow excitatory synaptic currents have much more complex and oscillatory fluctuations than the noise current with the same average intensity. Thus network driven by synaptic external current exhibits remarkably more complex dynamics than that driven by noise external current. Interestingly, the enhancement of network activity is beneficial for information transmission, which is further supported by two computational tasks conducted on the liquid state machine (LSM) network. LSM with synaptic external current displays considerably better performance in both nonlinear fitting and pattern classification than that with noise external current. Synaptic integration can significantly enhance the entropy of activity patterns and computational performance of LSM. Our results demonstrate that the complex dynamics of nonlinear synaptic integration play a critical role in the computational abilities of neural networks and should be more broadly considered in the modelling studies of spiking neural networks.
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9
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Zhang G, Guo D, Wu F, Ma J. Memristive autapse involving magnetic coupling and excitatory autapse enhance firing. Neurocomputing 2020. [DOI: 10.1016/j.neucom.2019.10.093] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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10
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Szegedi V, Paizs M, Baka J, Barzó P, Molnár G, Tamas G, Lamsa K. Robust perisomatic GABAergic self-innervation inhibits basket cells in the human and mouse supragranular neocortex. eLife 2020; 9:51691. [PMID: 31916939 PMCID: PMC6984819 DOI: 10.7554/elife.51691] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Accepted: 01/08/2020] [Indexed: 01/08/2023] Open
Abstract
Inhibitory autapses are self-innervating synaptic connections in GABAergic interneurons in the brain. Autapses in neocortical layers have not been systematically investigated, and their function in different mammalian species and specific interneuron types is poorly known. We investigated GABAergic parvalbumin-expressing basket cells (pvBCs) in layer 2/3 (L2/3) in human neocortical tissue resected in deep-brain surgery, and in mice as control. Most pvBCs showed robust GABAAR-mediated self-innervation in both species, but autapses were rare in nonfast-spiking GABAergic interneurons. Light- and electron microscopy analyses revealed pvBC axons innervating their own soma and proximal dendrites. GABAergic self-inhibition conductance was similar in human and mouse pvBCs and comparable to that of synapses from pvBCs to other L2/3 neurons. Autaptic conductance prolonged somatic inhibition in pvBCs after a spike and inhibited repetitive firing. Perisomatic autaptic inhibition is common in both human and mouse pvBCs of supragranular neocortex, where they efficiently control discharge of the pvBCs.
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Affiliation(s)
- Viktor Szegedi
- MTA-NAP Research Group for Inhibitory Interneurons and Plasticity, Department of Physiology, Anatomy and Neuroscience, University of Szeged, Szeged, Hungary
| | - Melinda Paizs
- MTA-NAP Research Group for Inhibitory Interneurons and Plasticity, Department of Physiology, Anatomy and Neuroscience, University of Szeged, Szeged, Hungary
| | - Judith Baka
- MTA-SZTE Research Group for Cortical Microcircuits, Department of Physiology, Anatomy and Neuroscience, University of Szeged, Szeged, Hungary
| | - Pál Barzó
- Department of Neurosurgery, University of Szeged, Szeged, Hungary
| | - Gábor Molnár
- MTA-SZTE Research Group for Cortical Microcircuits, Department of Physiology, Anatomy and Neuroscience, University of Szeged, Szeged, Hungary
| | - Gabor Tamas
- MTA-SZTE Research Group for Cortical Microcircuits, Department of Physiology, Anatomy and Neuroscience, University of Szeged, Szeged, Hungary
| | - Karri Lamsa
- MTA-NAP Research Group for Inhibitory Interneurons and Plasticity, Department of Physiology, Anatomy and Neuroscience, University of Szeged, Szeged, Hungary
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11
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Zhang T, Pan X, Xu X, Wang R. A cortical model with multi-layers to study visual attentional modulation of neurons at the synaptic level. Cogn Neurodyn 2019; 13:579-599. [PMID: 31741694 PMCID: PMC6825110 DOI: 10.1007/s11571-019-09540-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Revised: 05/08/2019] [Accepted: 05/12/2019] [Indexed: 11/24/2022] Open
Abstract
Visual attention is a selective process of visual information and improves perceptual performance by modulating activities of neurons in the visual system. It has been reported that attention increased firing rates of neurons, reduced their response variability and improved reliability of coding relevant stimuli. Recent neurophysiological studies demonstrated that attention also enhanced the synaptic efficacy between neurons mediated through NMDA and AMPA receptors. Majority of computational models of attention usually are based on firing rates, which cannot explain attentional modulations observed at the synaptic level. To understand mechanisms of attentional modulations at the synaptic level, we proposed a neural network consisting of three layers, corresponding to three different brain regions. Each layer has excitatory and inhibitory neurons. Each neuron was modeled by the Hodgkin-Huxley model. The connections between neurons were through excitatory AMPA and NMDA receptors, as well as inhibitory GABAA receptors. Since the binding process of neurotransmitters with receptors is stochastic in the synapse, it is hypothesized that attention could reduce the variation of the stochastic binding process and increase the fraction of bound receptors in the model. We investigated how attention modulated neurons' responses at the synaptic level on the basis of this hypothesis. Simulated results demonstrated that attention increased firing rates of neurons and reduced their response variability. The attention-induced effects were stronger in higher regions compared to those in lower regions, and stronger for inhibitory neurons than for excitatory neurons. In addition, AMPA receptor antagonist (CNQX) impaired attention-induced modulations on neurons' responses, while NMDA receptor antagonist (APV) did not. These results suggest that attention may modulate neuronal activity at the synaptic level.
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Affiliation(s)
- Tao Zhang
- Institute for Cognitive Neurodynamics, East China University of Science and Technology, Meilong Road 130, Shanghai, People’s Republic of China
| | - Xiaochuan Pan
- Institute for Cognitive Neurodynamics, East China University of Science and Technology, Meilong Road 130, Shanghai, People’s Republic of China
| | - Xuying Xu
- Institute for Cognitive Neurodynamics, East China University of Science and Technology, Meilong Road 130, Shanghai, People’s Republic of China
| | - Rubin Wang
- Institute for Cognitive Neurodynamics, East China University of Science and Technology, Meilong Road 130, Shanghai, People’s Republic of China
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12
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Protachevicz PR, Borges FS, Lameu EL, Ji P, Iarosz KC, Kihara AH, Caldas IL, Szezech JD, Baptista MS, Macau EEN, Antonopoulos CG, Batista AM, Kurths J. Bistable Firing Pattern in a Neural Network Model. Front Comput Neurosci 2019; 13:19. [PMID: 31024282 PMCID: PMC6460289 DOI: 10.3389/fncom.2019.00019] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Accepted: 03/18/2019] [Indexed: 11/13/2022] Open
Abstract
Excessively high, neural synchronization has been associated with epileptic seizures, one of the most common brain diseases worldwide. A better understanding of neural synchronization mechanisms can thus help control or even treat epilepsy. In this paper, we study neural synchronization in a random network where nodes are neurons with excitatory and inhibitory synapses, and neural activity for each node is provided by the adaptive exponential integrate-and-fire model. In this framework, we verify that the decrease in the influence of inhibition can generate synchronization originating from a pattern of desynchronized spikes. The transition from desynchronous spikes to synchronous bursts of activity, induced by varying the synaptic coupling, emerges in a hysteresis loop due to bistability where abnormal (excessively high synchronous) regimes exist. We verify that, for parameters in the bistability regime, a square current pulse can trigger excessively high (abnormal) synchronization, a process that can reproduce features of epileptic seizures. Then, we show that it is possible to suppress such abnormal synchronization by applying a small-amplitude external current on > 10% of the neurons in the network. Our results demonstrate that external electrical stimulation not only can trigger synchronous behavior, but more importantly, it can be used as a means to reduce abnormal synchronization and thus, control or treat effectively epileptic seizures.
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Affiliation(s)
- Paulo R Protachevicz
- Graduate in Science Program-Physics, State University of Ponta Grossa, Ponta Grossa, Brazil
| | - Fernando S Borges
- Center for Mathematics, Computation, and Cognition, Federal University of ABC, São Bernardo do Campo, Brazil
| | - Ewandson L Lameu
- National Institute for Space Research, São José dos Campos, Brazil
| | - Peng Ji
- Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai, China.,Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence (Fudan University), Ministry of Education, Shanghai, China
| | - Kelly C Iarosz
- Institute of Physics, University of São Paulo, São Paulo, Brazil
| | - Alexandre H Kihara
- Center for Mathematics, Computation, and Cognition, Federal University of ABC, São Bernardo do Campo, Brazil
| | - Ibere L Caldas
- Institute of Physics, University of São Paulo, São Paulo, Brazil
| | - Jose D Szezech
- Graduate in Science Program-Physics, State University of Ponta Grossa, Ponta Grossa, Brazil.,Department of Mathematics and Statistics, State University of Ponta Grossa, Ponta Grossa, Brazil
| | - Murilo S Baptista
- Institute for Complex Systems and Mathematical Biology, SUPA, University of Aberdeen, Aberdeen, United Kingdom
| | - Elbert E N Macau
- National Institute for Space Research, São José dos Campos, Brazil
| | - Chris G Antonopoulos
- Department of Mathematical Sciences, University of Essex, Colchester, United Kingdom
| | - Antonio M Batista
- Graduate in Science Program-Physics, State University of Ponta Grossa, Ponta Grossa, Brazil.,Department of Mathematics and Statistics, State University of Ponta Grossa, Ponta Grossa, Brazil
| | - Jürgen Kurths
- Potsdam Institute for Climate Impact Research, Potsdam, Germany.,Department of Physics, Humboldt University, Berlin, Germany
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13
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Agaoglu SN, Calim A, Hövel P, Ozer M, Uzuntarla M. Vibrational resonance in a scale-free network with different coupling schemes. Neurocomputing 2019. [DOI: 10.1016/j.neucom.2018.09.070] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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14
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Yuan Y, Huo H, Zhao P, Liu J, Liu J, Xing F, Fang T. Constraints of Metabolic Energy on the Number of Synaptic Connections of Neurons and the Density of Neuronal Networks. Front Comput Neurosci 2018; 12:91. [PMID: 30524259 PMCID: PMC6256250 DOI: 10.3389/fncom.2018.00091] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2018] [Accepted: 10/31/2018] [Indexed: 11/13/2022] Open
Abstract
Neuronal networks in the brain are the structural basis of human cognitive function, and the plasticity of neuronal networks is thought to be the principal neural mechanism underlying learning and memory. Dominated by the Hebbian theory, researchers have devoted extensive effort to studying the changes in synaptic connections between neurons. However, understanding the network topology of all synaptic connections has been neglected over the past decades. Furthermore, increasing studies indicate that synaptic activities are tightly coupled with metabolic energy, and metabolic energy is a unifying principle governing neuronal activities. Therefore, the network topology of all synaptic connections may also be governed by metabolic energy. Here, by implementing a computational model, we investigate the general synaptic organization rules for neurons and neuronal networks from the perspective of energy metabolism. We find that to maintain the energy balance of individual neurons in the proposed model, the number of synaptic connections is inversely proportional to the average of the synaptic weights. This strategy may be adopted by neurons to ensure that the ability of neurons to transmit signals matches their own energy metabolism. In addition, we find that the density of neuronal networks is also an important factor in the energy balance of neuronal networks. An abnormal increase or decrease in the network density could lead to failure of energy metabolism in the neuronal network. These rules may change our view of neuronal networks in the brain and have guiding significance for the design of neuronal network models.
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Affiliation(s)
- Ye Yuan
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
| | - Hong Huo
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
| | - Peng Zhao
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
| | - Jian Liu
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
| | - Jiaxing Liu
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
| | - Fu Xing
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
| | - Tao Fang
- Department of Automation, Shanghai Jiao Tong University, Shanghai, China.,Key Laboratory of System Control and Information Processing, Ministry of Education, Shanghai, China
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15
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Zhang L, Fan D, Wang Q, Baier G. Effects of brain-derived neurotrophic factor and noise on transitions in temporal lobe epilepsy in a hippocampal network. CHAOS (WOODBURY, N.Y.) 2018; 28:106322. [PMID: 30384669 DOI: 10.1063/1.5036690] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Accepted: 09/19/2018] [Indexed: 06/08/2023]
Abstract
Brain-derived neurotrophic factor (BDNF) has recently been implicated in the modulation of receptor activation leading to dynamic state transitions in temporal lobe epilepsy (TLE). In addition, the crucial role of neuronal noise in these transitions has been studied in electrophysiological experiments. However, the precise role of these factors during seizure generation in TLE is not known. Building on a previously proposed model of an epileptogenic hippocampal network, we included the actions of BDNF-regulated receptors and intrinsic noise. We found that the effects of both BDNF and noise can increase the activation of N-methyl-D-aspartate receptors leading to excessive C a 2 + flux, which induces abnormal fast spiking and bursting. Our results indicate that the combined effects have a strong influence on the seizure-generating network, resulting in higher firing frequency and amplitude. As correlations between firing increase, the synchronization of the entire network increases, a marker of the ictogenic transitions from normal to seizures-like dynamics. Our work on the effects of BDNF dynamics in a noisy environment might lead to an improved model-based understanding of the pathological mechanisms in TLE.
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Affiliation(s)
- Liyuan Zhang
- Department of Dynamics and Control, Beihang University, 100191 Beijing, China
| | - Denggui Fan
- School of Mathematics and Physics, University of Science and Technology Beijing, 100083 Beijing, China
| | - Qingyun Wang
- Department of Dynamics and Control, Beihang University, 100191 Beijing, China
| | - Gerold Baier
- Cell and Developmental Biology, University College London, London WC1E 6BT, United Kingdom
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16
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Ge M, Xu Y, Lu L, Zhao Y, Yang L, Zhan X, Gao K, Li A, Jia Y. Effect of external periodic signals and electromagnetic radiation on autaptic regulation of neuronal firing. IET Syst Biol 2018; 12:177-184. [PMID: 33451180 DOI: 10.1049/iet-syb.2017.0069] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Revised: 03/22/2018] [Accepted: 03/25/2018] [Indexed: 01/20/2023] Open
Abstract
An improved Hindmarsh-Rose (HR) neuron model, where the memristor is a bridge between membrane potential and magnetic flux, can be used to investigate the effect of periodic signals on autaptic regulation of neurons under electromagnetic radiation. Based on the improved HR model driven by periodic high-low-frequency current and electromagnetic radiation, the responses of electrical autaptic regulation with diverse high-low-frequency signals are investigated using bifurcation analysis. It is found that the electrical modes of neurons are determined by the selecting parameters of both periodic high and low-frequency current and electromagnetic radiation, and the Hamiltonian energy depends on the neuronal firing modes. The effects of Gaussian white noise on the membrane potential are discussed using numerical simulations. It is demonstrated that external high-low-frequency stimulus plays a significant role in the autaptic regulation of neural firing mode, and the electrical mode of neurons can be affected by the angular frequency of both high-low-frequency forcing current and electromagnetic radiation. The mechanism of neuronal firing regulated by high-low-frequency signal and electromagnetic radiation discussed here could be applied to research neuronal networks and synchronisation modes.
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Affiliation(s)
- Mengyan Ge
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Ying Xu
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Lulu Lu
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Yunjie Zhao
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Lijian Yang
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Xuan Zhan
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Kaifu Gao
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Anbang Li
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
| | - Ya Jia
- Department of Physics and Institute of Biophysics, Central China Normal University, Wuhan, 430079, People's Republic of China
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17
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Xu Y, Zhang CH, Niebur E, Wang JS. Analytically determining frequency and amplitude of spontaneous alpha oscillation in Jansen's neural mass model using the describing function method. CHINESE PHYSICS B = ZHONGGUO WU LI B 2018; 27:048701. [PMID: 34322160 PMCID: PMC8315699 DOI: 10.1088/1674-1056/27/4/048701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Spontaneous alpha oscillations are a ubiquitous phenomenon in the brain and play a key role in neural information processing and various cognitive functions. Jansen's neural mass model (NMM) was initially proposed to study the origin of alpha oscillations. Most of previous studies of the spontaneous alpha oscillations in the NMM were conducted using numerical methods. In this study, we aim to propose an analytical approach using the describing function method to elucidate the spontaneous alpha oscillation mechanism in the NMM. First, the sigmoid nonlinear function in the NMM is approximated by its describing function, allowing us to reformulate the NMM and derive its standard form composed of one nonlinear part and one linear part. Second, by conducting a theoretical analysis, we can assess whether or not the spontaneous alpha oscillation would occur in the NMM and, furthermore, accurately determine its amplitude and frequency. The results reveal analytically that the interaction between linearity and nonlinearity of the NMM plays a key role in generating the spontaneous alpha oscillations. Furthermore, strong nonlinearity and large linear strength are required to generate the spontaneous alpha oscillations.
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Affiliation(s)
- Yao Xu
- School of Biomedical Engineering, Tianjin Medical University, Tianjin 300070, China
- Qingdao Stomatological Hospital, Department of Medical Technology Equipment, Qingdao 266001, China
| | - Chun-Hui Zhang
- School of Biomedical Engineering, Tianjin Medical University, Tianjin 300070, China
| | - Ernst Niebur
- Zanvyl Krieger Mind/Brain Institute and Solomon Snyder Department of Neuroscience, Johns Hopkins University, Baltimore 21218, MD, USA
| | - Jun-Song Wang
- School of Biomedical Engineering, Tianjin Medical University, Tianjin 300070, China
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18
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Effects of ion channel blocks on electrical activity of stochastic Hodgkin–Huxley neural network under electromagnetic induction. Neurocomputing 2018. [DOI: 10.1016/j.neucom.2017.12.036] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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19
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Liu Y, Yue Y, Yu Y, Liu L, Yu L. Effects of channel blocking on information transmission and energy efficiency in squid giant axons. J Comput Neurosci 2018; 44:219-231. [PMID: 29327161 DOI: 10.1007/s10827-017-0676-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Revised: 11/18/2017] [Accepted: 12/11/2017] [Indexed: 11/25/2022]
Abstract
Action potentials are the information carriers of neural systems. The generation of action potentials involves the cooperative opening and closing of sodium and potassium channels. This process is metabolically expensive because the ions flowing through open channels need to be restored to maintain concentration gradients of these ions. Toxins like tetraethylammonium can block working ion channels, thus affecting the function and energy cost of neurons. In this paper, by computer simulation of the Hodgkin-Huxley neuron model, we studied the effects of channel blocking with toxins on the information transmission and energy efficiency in squid giant axons. We found that gradually blocking sodium channels will sequentially maximize the information transmission and energy efficiency of the axons, whereas moderate blocking of potassium channels will have little impact on the information transmission and will decrease the energy efficiency. Heavy blocking of potassium channels will cause self-sustained oscillation of membrane potentials. Simultaneously blocking sodium and potassium channels with the same ratio increases both information transmission and energy efficiency. Our results are in line with previous studies suggesting that information processing capacity and energy efficiency can be maximized by regulating the number of active ion channels, and this indicates a viable avenue for future experimentation.
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Affiliation(s)
- Yujiang Liu
- Institute of Theoretical Physics, Lanzhou University, Lanzhou, 730000, China
| | - Yuan Yue
- Institute of Theoretical Physics, Lanzhou University, Lanzhou, 730000, China
- College of Electrical Engineering, Northwest University for Nationalities, Lanzhou, 730070, China
| | - Yuguo Yu
- School of Life Science and the Collaborative Innovation Center for Brain Science, Center for Computational Systems Biology, Fudan University, Shanghai Shi, 200433, China
| | - Liwei Liu
- College of Electrical Engineering, Northwest University for Nationalities, Lanzhou, 730070, China
| | - Lianchun Yu
- Institute of Theoretical Physics, Lanzhou University, Lanzhou, 730000, China.
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20
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Zhu J, Liu X. Measuring spike timing distance in the Hindmarsh-Rose neurons. Cogn Neurodyn 2017; 12:225-234. [PMID: 29564030 DOI: 10.1007/s11571-017-9466-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2017] [Revised: 11/28/2017] [Accepted: 12/19/2017] [Indexed: 11/28/2022] Open
Abstract
In the present paper, a simple spike timing distance is defined which can be used to measure the degree of synchronization with the information only encoded in the precise timing of the spike trains. Via calculating the spike timing distance defined in this paper, the spike train similarity of uncoupled Hindmarsh-Rose neurons in bursting or spiking states with different initial conditions is investigated and the results are compared with other spike train distance measures. Later, the spike timing distance measure is applied to study the synchronization of coupled or common noise-stimulated neurons. Counterintuitively, the addition of weak coupling or common noise doesn't enhance the degree of synchronization although after critical values, both of them can induce complete synchronizations. More interestingly, the common noise plays opposite roles for weak and strong enough couplings. Finally, it should be noted that the measure defined in this paper can be extended to measure large neuronal ensembles and the lag synchronization.
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Affiliation(s)
- Jinjie Zhu
- State Key Laboratory of Mechanics and Control of Mechanical Structures, College of Aerospace Engineering, Nanjing University of Aeronautics and Astronautics, 29 YuDao Street, Nanjing, 210016 Jiangsu Province People's Republic of China
| | - Xianbin Liu
- State Key Laboratory of Mechanics and Control of Mechanical Structures, College of Aerospace Engineering, Nanjing University of Aeronautics and Astronautics, 29 YuDao Street, Nanjing, 210016 Jiangsu Province People's Republic of China
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21
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Hu B, Guo Y, Zou X, Dong J, Pan L, Yu M, Yang Z, Zhou C, Cheng Z, Tang W, Sun H. Controlling mechanism of absence seizures by deep brain stimulus applied on subthalamic nucleus. Cogn Neurodyn 2017; 12:103-119. [PMID: 29435091 DOI: 10.1007/s11571-017-9457-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2017] [Revised: 09/14/2017] [Accepted: 10/11/2017] [Indexed: 12/11/2022] Open
Abstract
Based on a classical model of the basal ganglia thalamocortical network, in this paper, we employed a type of the deep brain stimulus voltage on the subthalamic nucleus to study the control mechanism of absence epilepsy seizures. We found that the seizure can be well controlled by turning the period and the duration of current stimulation into suitable ranges. It is the very interesting bidirectional periodic adjustment phenomenon. These parameters are easily regulated in clinical practice, therefore, the results obtained in this paper may further help us to understand the treatment mechanism of the epilepsy seizure.
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Affiliation(s)
- Bing Hu
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Yu Guo
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Xiaoqiang Zou
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Jing Dong
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Long Pan
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Min Yu
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Zhejia Yang
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Chaowei Zhou
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Zhang Cheng
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Wanyue Tang
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
| | - Haochen Sun
- Institute of Applied Mathematics, Department of Mathematics and Statistics, College of Science, Huazhong Agricultural University, Wuhan, 430070 China
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22
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Fan D, Wang Q, Su J, Xi H. Stimulus-induced transitions between spike-wave discharges and spindles with the modulation of thalamic reticular nucleus. J Comput Neurosci 2017; 43:203-225. [PMID: 28939929 DOI: 10.1007/s10827-017-0658-4] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2017] [Revised: 08/11/2017] [Accepted: 09/04/2017] [Indexed: 12/19/2022]
Abstract
It is believed that thalamic reticular nucleus (TRN) controls spindles and spike-wave discharges (SWD) in seizure or sleeping processes. The dynamical mechanisms of spatiotemporal evolutions between these two types of activity, however, are not well understood. In light of this, we first use a single-compartment thalamocortical neural field model to investigate the effects of TRN on occurrence of SWD and its transition. Results show that the increasing inhibition from TRN to specific relay nuclei (SRN) can lead to the transition of system from SWD to slow-wave oscillation. Specially, it is shown that stimulations applied in the cortical neuronal populations can also initiate the SWD and slow-wave oscillation from the resting states under the typical inhibitory intensity from TRN to SRN. Then, we expand into a 3-compartment coupled thalamocortical model network in linear and circular structures, respectively, to explore the spatiotemporal evolutions of wave states in different compartments. The main results are: (i) for the open-ended model network, SWD induced by stimulus in the first compartment can be transformed into sleep-like slow UP-DOWN and spindle states as it propagates into the downstream compartments; (ii) for the close-ended model network, weak stimulations performed in the first compartment can result in the consistent experimentally observed spindle oscillations in all three compartments; in contrast, stronger periodic single-pulse stimulations applied in the first compartment can induce periodic transitions between SWD and spindle oscillations. Detailed investigations reveal that multi-attractor coexistence mechanism composed of SWD, spindles and background state underlies these state evolutions. What's more, in order to demonstrate the state evolution stability with respect to the topological structures of neural network, we further expand the 3-compartment coupled network into 10-compartment coupled one, with linear and circular structures, and nearest-neighbor (NN) coupled network as well as its realization of small-world (SW) topology via random rewiring, respectively. Interestingly, for the cases of linear and circular connetivities, qualitatively similar results were obtained in addition to the more irregularity of firings. However, SWD can be eventually transformed into the consistent low-amplitude oscillations for both NN and SW networks. In particular, SWD evolves into the slow spindling oscillations and background tonic oscillations within the NN and SW network, respectively. Our modeling and simulation studies highlight the effect of network topology in the evolutions of SWD and spindling oscillations, which provides new insights into the mechanisms of cortical seizures development.
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Affiliation(s)
- Denggui Fan
- School of Mathematics and Physics, University of Science and Technology Beijing, Beijing, 100083, China
| | - Qingyun Wang
- Department of Dynamics and Control, Beihang University, Beijing, 100191, China.
| | - Jianzhong Su
- Department of Mathematics, University of Texas at Arlington, Arlington, TX, 76019-0408, USA
| | - Hongguang Xi
- Department of Mathematics, University of Texas at Arlington, Arlington, TX, 76019-0408, USA
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23
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Tan TL, Cheong SA. Statistical complexity is maximized in a small-world brain. PLoS One 2017; 12:e0183918. [PMID: 28850587 PMCID: PMC5574548 DOI: 10.1371/journal.pone.0183918] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2017] [Accepted: 08/14/2017] [Indexed: 01/03/2023] Open
Abstract
In this paper, we study a network of Izhikevich neurons to explore what it means for a brain to be at the edge of chaos. To do so, we first constructed the phase diagram of a single Izhikevich excitatory neuron, and identified a small region of the parameter space where we find a large number of phase boundaries to serve as our edge of chaos. We then couple the outputs of these neurons directly to the parameters of other neurons, so that the neuron dynamics can drive transitions from one phase to another on an artificial energy landscape. Finally, we measure the statistical complexity of the parameter time series, while the network is tuned from a regular network to a random network using the Watts-Strogatz rewiring algorithm. We find that the statistical complexity of the parameter dynamics is maximized when the neuron network is most small-world-like. Our results suggest that the small-world architecture of neuron connections in brains is not accidental, but may be related to the information processing that they do.
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Affiliation(s)
- Teck Liang Tan
- Division of Physics and Applied Physics, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371, Republic of Singapore
- Complexity Institute, Nanyang Technological University, Block 2 Innovation Centre, Level 2 Unit 245, 18 Nanyang Drive, Singapore 637723, Republic of Singapore
- * E-mail:
| | - Siew Ann Cheong
- Division of Physics and Applied Physics, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371, Republic of Singapore
- Complexity Institute, Nanyang Technological University, Block 2 Innovation Centre, Level 2 Unit 245, 18 Nanyang Drive, Singapore 637723, Republic of Singapore
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24
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Zhao Z, Gu H. Transitions between classes of neuronal excitability and bifurcations induced by autapse. Sci Rep 2017; 7:6760. [PMID: 28755006 PMCID: PMC5533805 DOI: 10.1038/s41598-017-07051-9] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2017] [Accepted: 06/21/2017] [Indexed: 11/10/2022] Open
Abstract
Neuronal excitabilities behave as the basic and important dynamics related to the transitions between firing and resting states, and are characterized by distinct bifurcation types and spiking frequency responses. Switches between class I and II excitabilities induced by modulations outside the neuron (for example, modulation to M-type potassium current) have been one of the most concerning issues in both electrophysiology and nonlinear dynamics. In the present paper, we identified switches between 2 classes of excitability and firing frequency responses when an autapse, which widely exists in real nervous systems and plays important roles via self-feedback, is introduced into the Morris-Lecar (ML) model neuron. The transition from class I to class II excitability and from class II to class I spiking frequency responses were respectively induced by the inhibitory and excitatory autapse, which are characterized by changes of bifurcations, frequency responses, steady-state current-potential curves, and nullclines. Furthermore, we identified codimension-1 and -2 bifurcations and the characteristics of the current-potential curve that determine the transitions. Our results presented a comprehensive relationship between 2 classes of neuronal excitability/spiking characterized by different types of bifurcations, along with a novel possible function of autapse or self-feedback control on modulating neuronal excitability.
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Affiliation(s)
- Zhiguo Zhao
- School of Aerospace Engineering and Applied Mechanics, Tongji University, Shanghai, 200092, China
| | - Huaguang Gu
- School of Aerospace Engineering and Applied Mechanics, Tongji University, Shanghai, 200092, China.
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25
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Uzuntarla M, Barreto E, Torres JJ. Inverse stochastic resonance in networks of spiking neurons. PLoS Comput Biol 2017; 13:e1005646. [PMID: 28692643 PMCID: PMC5524418 DOI: 10.1371/journal.pcbi.1005646] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Revised: 07/24/2017] [Accepted: 06/26/2017] [Indexed: 11/18/2022] Open
Abstract
Inverse Stochastic Resonance (ISR) is a phenomenon in which the average spiking rate of a neuron exhibits a minimum with respect to noise. ISR has been studied in individual neurons, but here, we investigate ISR in scale-free networks, where the average spiking rate is calculated over the neuronal population. We use Hodgkin-Huxley model neurons with channel noise (i.e., stochastic gating variable dynamics), and the network connectivity is implemented via electrical or chemical connections (i.e., gap junctions or excitatory/inhibitory synapses). We find that the emergence of ISR depends on the interplay between each neuron's intrinsic dynamical structure, channel noise, and network inputs, where the latter in turn depend on network structure parameters. We observe that with weak gap junction or excitatory synaptic coupling, network heterogeneity and sparseness tend to favor the emergence of ISR. With inhibitory coupling, ISR is quite robust. We also identify dynamical mechanisms that underlie various features of this ISR behavior. Our results suggest possible ways of experimentally observing ISR in actual neuronal systems.
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Affiliation(s)
- Muhammet Uzuntarla
- Department of Biomedical Engineering, Bulent Ecevit University, Engineering Faculty, Zonguldak, Turkey
| | - Ernest Barreto
- Department of Physics and Astronomy and The Krasnow Institute for Advanced Study, George Mason University, Fairfax, Virginia, United States of America
| | - Joaquin J. Torres
- Department of Electromagnetism and Physics of Matter, and Institute Carlos I for Theoretical and Computational Physics, University of Granada, Granada, Spain
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26
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Yi GS, Wang J, Deng B, Wei XL. Morphology controls how hippocampal CA1 pyramidal neuron responds to uniform electric fields: a biophysical modeling study. Sci Rep 2017; 7:3210. [PMID: 28607422 PMCID: PMC5468310 DOI: 10.1038/s41598-017-03547-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2017] [Accepted: 04/28/2017] [Indexed: 01/24/2023] Open
Abstract
Responses of different neurons to electric field (EF) are highly variable, which depends on intrinsic properties of cell type. Here we use multi-compartmental biophysical models to investigate how morphologic features affect EF-induced responses in hippocampal CA1 pyramidal neurons. We find that the basic morphologies of neuronal elements, including diameter, length, bend, branch, and axon terminals, are all correlated with somatic depolarization through altering the current sources or sinks created by applied field. Varying them alters the EF threshold for triggering action potentials (APs), and then determines cell sensitivity to suprathreshold field. Introducing excitatory postsynaptic potential increases cell excitability and reduces morphology-dependent EF firing threshold. It is also shown that applying identical subthreshold EF results in distinct polarizations on cell membrane with different realistic morphologies. These findings shed light on the crucial role of morphologies in determining field-induced neural response from the point of view of biophysical models. The predictions are conducive to better understanding the variability in modulatory effects of EF stimulation at the cellular level, which could also aid the interpretations of how applied fields activate central nervous system neurons and affect relevant circuits.
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Affiliation(s)
- Guo-Sheng Yi
- School of Electrical and Information Engineering, Tianjin University, Tianjin, 300072, China
| | - Jiang Wang
- School of Electrical and Information Engineering, Tianjin University, Tianjin, 300072, China.
| | - Bin Deng
- School of Electrical and Information Engineering, Tianjin University, Tianjin, 300072, China
| | - Xi-Le Wei
- School of Electrical and Information Engineering, Tianjin University, Tianjin, 300072, China
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27
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Xu Y, Ying H, Jia Y, Ma J, Hayat T. Autaptic regulation of electrical activities in neuron under electromagnetic induction. Sci Rep 2017; 7:43452. [PMID: 28240314 PMCID: PMC5327473 DOI: 10.1038/srep43452] [Citation(s) in RCA: 100] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Accepted: 01/23/2017] [Indexed: 11/09/2022] Open
Abstract
Realistic neurons may hold complex anatomical structure, for example, autapse connection to some internuncial neurons, which this specific synapse can connect to its body via a close loop. Continuous exchanges of charged ions across the membrane can induce complex distribution fluctuation of intracellular and extracellular charged ions of cell, and a time-varying electromagnetic field is set to modulate the membrane potential of neuron. In this paper, an autapse-modulated neuron model is presented and the effect of electromagnetic induction is considered by using magnetic flux. Bifurcation analysis and sampled time series for membrane potentials are calculated to investigate the mode transition in electrical activities and the biological function of autapse connection is discussed. Furthermore, the Gaussian white noise and electromagnetic radiation are considered on the improved neuron model, it is found appropriate setting and selection for feedback gain and time delay in autapse can suppress the bursting in neuronal behaviors. It indicates the formation of autapse can enhance the self-adaption of neuron so that appropriate response to external forcing can be selected, this biological function is helpful for encoding and signal propagation of neurons. It can be useful for investigation about collective behaviors in neuronal networks exposed to electromagnetic radiation.
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Affiliation(s)
- Ying Xu
- Department of Physics, Lanzhou University of Technology, Lanzhou 730050, China.,Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China
| | - Heping Ying
- Department of Physics, Zhejiang University, Hangzhou 310027, China
| | - Ya Jia
- Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China
| | - Jun Ma
- Department of Physics, Lanzhou University of Technology, Lanzhou 730050, China.,King Abdulaziz Univ, Fac Sci, Dept Math, NAAM Res Grp, Jeddah 21589, Saudi Arabia
| | - Tasawar Hayat
- King Abdulaziz Univ, Fac Sci, Dept Math, NAAM Res Grp, Jeddah 21589, Saudi Arabia.,Quaid I Azam Univ, Dept Math, Islamabad 44000, Pakistan
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28
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Su F, Wang J, Li H, Deng B, Yu H, Liu C. Analysis and application of neuronal network controllability and observability. CHAOS (WOODBURY, N.Y.) 2017; 27:023103. [PMID: 28249409 DOI: 10.1063/1.4975124] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Controllability and observability analyses are important prerequisite for designing suitable neural control strategy, which can help lower the efforts required to control and observe the system dynamics. First, 3-neuron motifs including the excitatory motif, the inhibitory motif, and the mixed motif are constructed to investigate the effects of single neuron and synaptic dynamics on network controllability (observability). Simulation results demonstrate that for networks with the same topological structure, the controllability (observability) of the node always changes if the properties of neurons and synaptic coupling strengths vary. Besides, the inhibitory networks are more controllable (observable) than the excitatory networks when the coupling strengths are the same. Then, the numerically determined controllability results of 3-neuron excitatory motifs are generalized to the desynchronization control of the modular motif network. The control energy and neuronal synchrony measure indexes are used to quantify the controllability of each node in the modular network. The best driver node obtained in this way is the same as the deduced one from motif analysis.
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Affiliation(s)
- Fei Su
- School of Electrical Engineering and Automation, Tianjin University, Tianjin 300072, China
| | - Jiang Wang
- School of Electrical Engineering and Automation, Tianjin University, Tianjin 300072, China
| | - Huiyan Li
- School of Automation and Electrical Engineering, Tianjin University of Technology and Education, Tianjin 300222, China
| | - Bin Deng
- School of Electrical Engineering and Automation, Tianjin University, Tianjin 300072, China
| | - Haitao Yu
- School of Electrical Engineering and Automation, Tianjin University, Tianjin 300072, China
| | - Chen Liu
- School of Electrical Engineering and Automation, Tianjin University, Tianjin 300072, China
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Madadi Asl M, Valizadeh A, Tass PA. Dendritic and Axonal Propagation Delays Determine Emergent Structures of Neuronal Networks with Plastic Synapses. Sci Rep 2017; 7:39682. [PMID: 28045109 PMCID: PMC5206725 DOI: 10.1038/srep39682] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2016] [Accepted: 11/25/2016] [Indexed: 11/09/2022] Open
Abstract
Spike-timing-dependent plasticity (STDP) modifies synaptic strengths based on the relative timing of pre- and postsynaptic spikes. The temporal order of spikes turned out to be crucial. We here take into account how propagation delays, composed of dendritic and axonal delay times, may affect the temporal order of spikes. In a minimal setting, characterized by neglecting dendritic and axonal propagation delays, STDP eliminates bidirectional connections between two coupled neurons and turns them into unidirectional connections. In this paper, however, we show that depending on the dendritic and axonal propagation delays, the temporal order of spikes at the synapses can be different from those in the cell bodies and, consequently, qualitatively different connectivity patterns emerge. In particular, we show that for a system of two coupled oscillatory neurons, bidirectional synapses can be preserved and potentiated. Intriguingly, this finding also translates to large networks of type-II phase oscillators and, hence, crucially impacts on the overall hierarchical connectivity patterns of oscillatory neuronal networks.
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Affiliation(s)
- Mojtaba Madadi Asl
- Institute for Advanced Studies in Basic Sciences (IASBS), Department of Physics, Zanjan, 45195-1159, Iran
| | - Alireza Valizadeh
- Institute for Advanced Studies in Basic Sciences (IASBS), Department of Physics, Zanjan, 45195-1159, Iran.,Institute for Research in Fundamental Sciences (IPM), School of Cognitive Sciences, Tehran, 19395-5746, Iran
| | - Peter A Tass
- Institute of Neuroscience and Medicine - Neuromodulation (INM-7), Research Center Jülich, Jülich, 52425, Germany.,Stanford University, Department of Neurosurgery, Stanford, CA, 94305, USA.,University of Cologne, Department of Neuromodulation, Cologne, 50937, Germany
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Stimulus-induced Epileptic Spike-Wave Discharges in Thalamocortical Model with Disinhibition. Sci Rep 2016; 6:37703. [PMID: 27876879 PMCID: PMC5120301 DOI: 10.1038/srep37703] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2016] [Accepted: 11/03/2016] [Indexed: 12/17/2022] Open
Abstract
Epileptic absence seizure characterized by the typical 2–4 Hz spike-wave discharges (SWD) are known to arise due to the physiologically abnormal interactions within the thalamocortical network. By introducing a second inhibitory neuronal population in the cortical system, here we propose a modified thalamocortical field model to mathematically describe the occurrences and transitions of SWD under the mutual functions between cortex and thalamus, as well as the disinhibitory modulations of SWD mediated by the two different inhibitory interneuronal populations. We first show that stimulation can induce the recurrent seizures of SWD in the modified model. Also, we demonstrate the existence of various types of firing states including the SWD. Moreover, we can identify the bistable parametric regions where the SWD can be both induced and terminated by stimulation perturbations applied in the background resting state. Interestingly, in the absence of stimulation disinhibitory functions between the two different interneuronal populations can also both initiate and abate the SWD, which suggests that the mechanism of disinhibition is comparable to the effect of stimulation in initiating and terminating the epileptic SWD. Hopefully, the obtained results can provide theoretical evidences in exploring dynamical mechanism of epileptic seizures.
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31
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Gong Y, Wang B, Xie H. Spike-timing-dependent plasticity enhanced synchronization transitions induced by autapses in adaptive Newman-Watts neuronal networks. Biosystems 2016; 150:132-137. [PMID: 27666636 DOI: 10.1016/j.biosystems.2016.09.006] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2016] [Revised: 07/19/2016] [Accepted: 09/21/2016] [Indexed: 11/16/2022]
Abstract
In this paper, we numerically study the effect of spike-timing-dependent plasticity (STDP) on synchronization transitions induced by autaptic activity in adaptive Newman-Watts Hodgkin-Huxley neuron networks. It is found that synchronization transitions induced by autaptic delay vary with the adjusting rate Ap of STDP and become strongest at a certain Ap value, and the Ap value increases when network randomness or network size increases. It is also found that the synchronization transitions induced by autaptic delay become strongest at a certain network randomness and network size, and the values increase and related synchronization transitions are enhanced when Ap increases. These results show that there is optimal STDP that can enhance the synchronization transitions induced by autaptic delay in the adaptive neuronal networks. These findings provide a new insight into the roles of STDP and autapses for the information transmission in neural systems.
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Affiliation(s)
- Yubing Gong
- School of Physics and Optoelectronic Engineering, Ludong University, Yantai, Shandong 264025, China.
| | - Baoying Wang
- Library, Ludong University, Yantai, Shandong 264025, China
| | - Huijuan Xie
- School of Physics and Optoelectronic Engineering, Ludong University, Yantai, Shandong 264025, China
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32
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Li J, Tang J, Ma J, Du M, Wang R, Wu Y. Dynamic transition of neuronal firing induced by abnormal astrocytic glutamate oscillation. Sci Rep 2016; 6:32343. [PMID: 27573570 PMCID: PMC5004107 DOI: 10.1038/srep32343] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2016] [Accepted: 08/05/2016] [Indexed: 02/01/2023] Open
Abstract
The gliotransmitter glutamate released from astrocytes can modulate neuronal firing by activating neuronal N-methyl-D-aspartic acid (NMDA) receptors. This enables astrocytic glutamate(AG) to be involved in neuronal physiological and pathological functions. Based on empirical results and classical neuron-glial "tripartite synapse" model, we propose a practical model to describe extracellular AG oscillation, in which the fluctuation of AG depends on the threshold of calcium concentration, and the effect of AG degradation is considered as well. We predict the seizure-like discharges under the dysfunction of AG degradation duration. Consistent with our prediction, the suppression of AG uptake by astrocytic transporters, which operates by modulating the AG degradation process, can account for the emergence of epilepsy.
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Affiliation(s)
- Jiajia Li
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace, Xi’an Jiaotong University, Xi’an 710049, China
| | - Jun Tang
- College of Science, China University of Mining and Technology, Xuzhou 221116, China
| | - Jun Ma
- Department of Physics, Lanzhou University of Technology, Lanzhou 730050, China
| | - Mengmeng Du
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace, Xi’an Jiaotong University, Xi’an 710049, China
| | - Rong Wang
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace, Xi’an Jiaotong University, Xi’an 710049, China
| | - Ying Wu
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace, Xi’an Jiaotong University, Xi’an 710049, China
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