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Hanopolskyi AI, Smaliak VA, Novichkov AI, Semenov SN. Autocatalysis: Kinetics, Mechanisms and Design. CHEMSYSTEMSCHEM 2020. [DOI: 10.1002/syst.202000026] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Anton I. Hanopolskyi
- Department of Organic Chemistry Weizmann Institute of Science Herzl, 234 7610001 Rehovot Israel
| | - Viktoryia A. Smaliak
- Department of Organic Chemistry Weizmann Institute of Science Herzl, 234 7610001 Rehovot Israel
| | - Alexander I. Novichkov
- Department of Organic Chemistry Weizmann Institute of Science Herzl, 234 7610001 Rehovot Israel
| | - Sergey N. Semenov
- Department of Organic Chemistry Weizmann Institute of Science Herzl, 234 7610001 Rehovot Israel
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Valls A, Altava B, Burguete MI, Escorihuela J, Martí-Centelles V, Luis SV. Supramolecularly assisted synthesis of chiral tripodal imidazolium compounds. Org Chem Front 2019. [DOI: 10.1039/c9qo00163h] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Supramolecular interactions based on amide groups direct the preferential formation of tritopic instead of monotopic or ditopic imidazolium compounds.
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Affiliation(s)
- Adriana Valls
- Departamento de Química Inorgánica y Orgánica
- Universitat Jaume I
- Castellón
- Spain
| | - Belén Altava
- Departamento de Química Inorgánica y Orgánica
- Universitat Jaume I
- Castellón
- Spain
| | - M. Isabel Burguete
- Departamento de Química Inorgánica y Orgánica
- Universitat Jaume I
- Castellón
- Spain
| | - Jorge Escorihuela
- Departamento de Química Inorgánica y Orgánica
- Universitat Jaume I
- Castellón
- Spain
| | | | - Santiago V. Luis
- Departamento de Química Inorgánica y Orgánica
- Universitat Jaume I
- Castellón
- Spain
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Banerjee S, Vanka K. B(C6F5)3: Catalyst or Initiator? Insights from Computational Studies into Surrogate Silicon Chemistry. ACS Catal 2018. [DOI: 10.1021/acscatal.7b04489] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Subhrashis Banerjee
- Physical and Material Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune 411008, Maharashtra, India
| | - Kumar Vanka
- Physical and Material Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune 411008, Maharashtra, India
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Shigeno M, Kushida Y, Yamaguchi M. Self-catalysis in thermal hysteresis during random-coil to helix-dimer transition of the sulfonamidohelicene tetramer. Chem Commun (Camb) 2015; 51:4040-3. [DOI: 10.1039/c4cc10418h] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The sulfonamidohelicene tetramer changes its structure between a random-coil and a helix-dimer, by which molecular thermal hysteresis appears.
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Affiliation(s)
- Masanori Shigeno
- Department of Organic Chemistry
- Graduate School of Pharmaceutical Sciences
- Tohoku University
- Aoba
- Japan
| | - Yo Kushida
- Department of Organic Chemistry
- Graduate School of Pharmaceutical Sciences
- Tohoku University
- Aoba
- Japan
| | - Masahiko Yamaguchi
- Department of Organic Chemistry
- Graduate School of Pharmaceutical Sciences
- Tohoku University
- Aoba
- Japan
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Cera L, Schalley CA. Stimuli-induced folding cascade of a linear oligomeric guest chain programmed through cucurbit[n]uril self-sorting (n = 6, 7, 8). Chem Sci 2014. [DOI: 10.1039/c3sc53211a] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
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Davis RL, Jensen KL, Gschwend B, Jørgensen KA. On the Mechanism of the Organocatalytic Asymmetric Epoxidation of α,β-Unsaturated Aldehydes. Chemistry 2013; 20:64-7. [DOI: 10.1002/chem.201303942] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2013] [Indexed: 11/09/2022]
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Malakoutikhah M, Peyralans JJP, Colomb-Delsuc M, Fanlo-Virgós H, Stuart MCA, Otto S. Uncovering the selection criteria for the emergence of multi-building-block replicators from dynamic combinatorial libraries. J Am Chem Soc 2013; 135:18406-17. [PMID: 24219346 DOI: 10.1021/ja4067805] [Citation(s) in RCA: 79] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
A family of self-replicating macrocycles was developed using dynamic combinatorial chemistry. Replication is driven by self-assembly of the replicators into fibrils and relies critically on mechanically induced fibril fragmentation. Analysis of separate dynamic combinatorial libraries made from one of six peptide-functionalized building blocks of different hydrophobicity revealed two selection criteria that govern the emergence of replicators from these systems. First, the replicators need to have a critical macrocycle size that endows them with sufficient multivalency to enable their self-assembly into fibrils. Second, efficient replication occurs only for library members that are of low abundance in the absence of a replication pathway. This work has led to spontaneous emergence of replicators with unrivalled structural complexity, being built from up to eight identical subunits and reaching a MW of up to 5.6 kDa. The insights obtained in this work provide valuable guidance that should facilitate future discovery of new complex self-replicating molecules. They may also assist in the development of new self-synthesizing materials, where self-assembly drives the synthesis of the very molecules that self-assemble. To illustrate the potential of this concept, the present system enables access to self-assembling materials made from self-synthesizing macrocycles with tunable ring size ranging from trimers to octamers.
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Affiliation(s)
- Morteza Malakoutikhah
- Centre for Systems Chemistry, Stratingh Institute, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
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Bissette AJ, Fletcher SP. Mechanisms of Autocatalysis. Angew Chem Int Ed Engl 2013; 52:12800-26. [DOI: 10.1002/anie.201303822] [Citation(s) in RCA: 273] [Impact Index Per Article: 22.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2013] [Indexed: 12/17/2022]
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Jo J, Olasz A, Chen CH, Lee D. Interdigitated Hydrogen Bonds: Electrophile Activation for Covalent Capture and Fluorescence Turn-On Detection of Cyanide. J Am Chem Soc 2013; 135:3620-32. [DOI: 10.1021/ja312313f] [Citation(s) in RCA: 111] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Junyong Jo
- Department
of Chemistry, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - András Olasz
- Department
of Chemistry, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Chun-Hsing Chen
- Department
of Chemistry, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Dongwhan Lee
- Department
of Chemistry, Indiana University, 800 East
Kirkwood Avenue, Bloomington, Indiana 47405, United States
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Huck J, Philp D. Replication Processes-From Autocatalysis to Systems Chemistry. Supramol Chem 2012. [DOI: 10.1002/9780470661345.smc158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Frischmann PD, Mehr SHM, Patrick BO, Lelj F, MacLachlan MJ. Role of Entropy and Autosolvation in Dimerization and Complexation of C60 by Zn7 Metallocavitands. Inorg Chem 2012; 51:3443-53. [DOI: 10.1021/ic202049t] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Peter D. Frischmann
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
| | - S. Hessam M. Mehr
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
| | - Brian O. Patrick
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
| | - Francesco Lelj
- La.M.I. and LaSCAMM INSTM Sezione Basilicata, Dipartimento di Chimica, Università della Basilicata, via dell’Ateneo
Lucano 10, 85100 Potenza, Italy
| | - Mark J. MacLachlan
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
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Tsogoeva SB. When chiral product and catalyst are the same: discovery of asymmetric organoautocatalysis. Chem Commun (Camb) 2010; 46:7662-9. [PMID: 20830352 DOI: 10.1039/c0cc02305a] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The process of asymmetric organoautocatalysis appears to be a natural extension to asymmetric organocatalysis, and holds implications for models on the origin of biological homochirality. The discovery of asymmetric organoautocatalysis (i.e. the process in which the chiral product of a purely organic reaction acts as an organocatalyst for its own formation under conservation of its absolute configuration) and more recent reports on related systems are discussed in this review.
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Affiliation(s)
- Svetlana B Tsogoeva
- Department of Chemistry and Pharmacy, Chair of Organic Chemistry I, University of Erlangen-Nuremberg, Henkestrasse 42, 91054 Erlangen, Germany.
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Rebek J, Kamioka S, Ajami D, C. Sather A, J. Hooley R. Autocatalysis and Organocatalysis with Kemp’s Triacid Compounds. HETEROCYCLES 2010. [DOI: 10.3987/com-10-s(e)31] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Abstract
The discovery of ribozymes led to the proposal of an RNA world, where a single type of molecule was supposedly capable of self-replication and chemical catalysis. We show here that both autocatalysis and organocatalysis can be engineered into a synthetic structure. The compound is shown to selectively accelerate its own formation and catalyze either hydrogenation or nucleophilic addition to alpha,beta-unsaturated aldehydes. The observed reactivity indicates that the components of a purported pre-RNA world conceivably include smaller organic molecules.
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